organic compounds
2,2,4-Trimethyl-5-(4-tolylsulfonyl)-2,3,4,5-tetrahydro-1H-1,5-benzodiazepine
aCentre of Advanced Study in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai 600 025, India, and bDepartment of Chemistry, Government Arts College (Autonomous), Coimbatore 641 018, India
*Correspondence e-mail: mnpsy2004@yahoo.com
In the title compound, C19H24N2O2S, the benzodiazepine ring adopts a distorted boat conformation. The S atom shows a distorted tetrahedral geometry, with the O—S—O [119.16 (14)°] and N—S—C [107.48 (10)°] angles deviating significantly from ideal values. The crystal packing is controlled by C—H⋯O, N—H⋯O and C—H⋯π interactions.
Related literature
For the use of benzodiazepines in the treatment of gastrointestinal and central nervous system disorders, see: Rahbaek et al. (1999). For hydrogen-bond motifs, see: Bernstein et al. (1995). For puckering and asymmetry parameters, see: Cremer & Pople (1975);) ; Nardelli (1983). For the Thorpe-Ingold effect, see: Bassindale (1984). For details of the preparation, see: Ponnuswamy et al. (2006).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809034837/bt5042sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809034837/bt5042Isup2.hkl
To a solution of 2,2,4-Trimethyl-1H-tetrahydro-1,5-benzodiazepine (0.59 g) in anhydrous benzene (16 ml), triethylamine (0.7 ml) and 4-toluenesulfonyl chloride (1 gm) were added. The reaction mixture was allowed to reflux for 16 hrs. The benzene solution was washed with water, dried over anhydrous Na2SO4 and concentrated. The resulting mass was purified by crystallization from benzene (Ponnuswamy et al., 2006).
The amino H atom was freely refined. The other H atoms were positioned geometrically (C—H=0.93–0.98 Å) and allowed to ride on their parent atoms, with 1.5Ueq(Cmethyl) or 1.2 Ueq(C). PLATON (Spek, 2009) detected a solvent accessible void of approximately 31 Å3. This void could have initially contained solvent molecules but these molecules have since evaporated from the structure without degradation of the crystal.
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Perspective view of the molecule showing the displacement ellipsoids at 30% probability level. H atoms have been omitted for clarity. | |
Fig. 2. The crystal packing of the molecules viewed down c–axis. H atoms not involved in hydrogen bonding have been omitted for clarity. |
C19H24N2O2S | F(000) = 736 |
Mr = 344.46 | Dx = 1.202 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 2546 reflections |
a = 7.3658 (3) Å | θ = 1.8–29.4° |
b = 14.8013 (8) Å | µ = 0.18 mm−1 |
c = 17.4556 (10) Å | T = 293 K |
V = 1903.07 (17) Å3 | Block, colourless |
Z = 4 | 0.25 × 0.20 × 0.20 mm |
Bruker Kappa APEXII area-detector diffractometer | 5154 independent reflections |
Radiation source: fine-focus sealed tube | 3278 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
ω and ϕ scans | θmax = 29.4°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −5→10 |
Tmin = 0.957, Tmax = 0.964 | k = −20→18 |
13544 measured reflections | l = −23→23 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.145 | w = 1/[σ2(Fo2) + (0.0742P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.009 |
5154 reflections | Δρmax = 0.18 e Å−3 |
224 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 2171 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.12 (9) |
C19H24N2O2S | V = 1903.07 (17) Å3 |
Mr = 344.46 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.3658 (3) Å | µ = 0.18 mm−1 |
b = 14.8013 (8) Å | T = 293 K |
c = 17.4556 (10) Å | 0.25 × 0.20 × 0.20 mm |
Bruker Kappa APEXII area-detector diffractometer | 5154 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 3278 reflections with I > 2σ(I) |
Tmin = 0.957, Tmax = 0.964 | Rint = 0.034 |
13544 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.145 | Δρmax = 0.18 e Å−3 |
S = 1.04 | Δρmin = −0.19 e Å−3 |
5154 reflections | Absolute structure: Flack (1983), 2171 Friedel pairs |
224 parameters | Absolute structure parameter: −0.12 (9) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.08799 (9) | 0.63541 (4) | 0.80960 (4) | 0.0620 (2) | |
O1 | 0.2717 (3) | 0.63113 (17) | 0.78264 (12) | 0.0849 (6) | |
O2 | 0.0096 (3) | 0.55749 (13) | 0.84498 (12) | 0.0870 (7) | |
N1 | −0.0887 (3) | 0.84795 (14) | 0.70370 (13) | 0.0566 (5) | |
H1 | −0.072 (4) | 0.897 (2) | 0.6945 (18) | 0.073 (9)* | |
C2 | −0.2833 (3) | 0.83013 (16) | 0.71790 (15) | 0.0520 (6) | |
C3 | −0.3323 (3) | 0.73221 (16) | 0.70025 (16) | 0.0577 (6) | |
H3A | −0.4623 | 0.7257 | 0.7074 | 0.069* | |
H3B | −0.3078 | 0.7218 | 0.6464 | 0.069* | |
C4 | −0.2402 (3) | 0.65759 (15) | 0.74511 (17) | 0.0589 (7) | |
H4 | −0.2719 | 0.6642 | 0.7993 | 0.071* | |
N5 | −0.0387 (3) | 0.66325 (13) | 0.73728 (11) | 0.0524 (5) | |
C6 | 0.0396 (3) | 0.70241 (16) | 0.66986 (13) | 0.0497 (6) | |
C7 | 0.1455 (3) | 0.6493 (2) | 0.62250 (16) | 0.0659 (7) | |
H7 | 0.1565 | 0.5877 | 0.6320 | 0.079* | |
C8 | 0.2354 (4) | 0.6879 (3) | 0.56082 (18) | 0.0855 (10) | |
H8 | 0.3070 | 0.6524 | 0.5289 | 0.103* | |
C9 | 0.2182 (4) | 0.7779 (3) | 0.54737 (17) | 0.0862 (11) | |
H9 | 0.2819 | 0.8041 | 0.5071 | 0.103* | |
C10 | 0.1077 (4) | 0.8310 (2) | 0.59246 (15) | 0.0676 (7) | |
H10 | 0.0954 | 0.8922 | 0.5814 | 0.081* | |
C11 | 0.0141 (3) | 0.79417 (17) | 0.65442 (13) | 0.0501 (6) | |
C12 | −0.3967 (5) | 0.8894 (2) | 0.6654 (2) | 0.0813 (9) | |
H12A | −0.3735 | 0.9518 | 0.6767 | 0.122* | |
H12B | −0.5231 | 0.8766 | 0.6732 | 0.122* | |
H12C | −0.3652 | 0.8773 | 0.6130 | 0.122* | |
C13 | −0.3238 (4) | 0.8554 (2) | 0.80092 (17) | 0.0704 (7) | |
H13A | −0.2526 | 0.8182 | 0.8345 | 0.106* | |
H13B | −0.4504 | 0.8460 | 0.8113 | 0.106* | |
H13C | −0.2939 | 0.9177 | 0.8092 | 0.106* | |
C14 | −0.3082 (5) | 0.5663 (2) | 0.7171 (3) | 0.0999 (13) | |
H14A | −0.2821 | 0.5600 | 0.6635 | 0.150* | |
H14B | −0.4369 | 0.5623 | 0.7251 | 0.150* | |
H14C | −0.2485 | 0.5190 | 0.7451 | 0.150* | |
C15 | 0.0750 (3) | 0.72366 (16) | 0.87704 (14) | 0.0516 (5) | |
C16 | 0.1482 (4) | 0.80712 (19) | 0.85876 (15) | 0.0640 (7) | |
H16 | 0.2035 | 0.8165 | 0.8115 | 0.077* | |
C17 | 0.1378 (4) | 0.8753 (2) | 0.91126 (17) | 0.0759 (8) | |
H17 | 0.1873 | 0.9313 | 0.8988 | 0.091* | |
C18 | 0.0569 (4) | 0.8647 (2) | 0.98198 (17) | 0.0722 (7) | |
C19 | −0.0125 (4) | 0.7808 (2) | 0.99895 (18) | 0.0796 (9) | |
H19 | −0.0666 | 0.7712 | 1.0464 | 0.095* | |
C20 | −0.0035 (4) | 0.7106 (2) | 0.94719 (17) | 0.0700 (8) | |
H20 | −0.0508 | 0.6543 | 0.9600 | 0.084* | |
C21 | 0.0455 (7) | 0.9425 (3) | 1.0377 (2) | 0.1170 (14) | |
H21A | −0.0147 | 0.9229 | 1.0836 | 0.176* | |
H21B | −0.0217 | 0.9911 | 1.0150 | 0.176* | |
H21C | 0.1657 | 0.9628 | 1.0501 | 0.176* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0663 (4) | 0.0509 (3) | 0.0687 (4) | 0.0183 (3) | 0.0157 (3) | 0.0095 (3) |
O1 | 0.0646 (11) | 0.1087 (16) | 0.0812 (13) | 0.0422 (12) | 0.0166 (10) | 0.0088 (13) |
O2 | 0.1298 (19) | 0.0453 (10) | 0.0858 (13) | 0.0116 (11) | 0.0213 (13) | 0.0147 (10) |
N1 | 0.0579 (12) | 0.0403 (11) | 0.0715 (13) | −0.0081 (9) | 0.0017 (11) | −0.0036 (10) |
C2 | 0.0474 (12) | 0.0439 (12) | 0.0648 (15) | 0.0013 (9) | −0.0032 (11) | −0.0035 (11) |
C3 | 0.0432 (11) | 0.0530 (13) | 0.0770 (17) | −0.0057 (10) | 0.0066 (12) | −0.0146 (13) |
C4 | 0.0530 (13) | 0.0434 (13) | 0.0803 (17) | −0.0027 (11) | 0.0239 (13) | −0.0049 (12) |
N5 | 0.0497 (11) | 0.0486 (11) | 0.0591 (11) | 0.0025 (8) | 0.0130 (9) | −0.0015 (9) |
C6 | 0.0443 (12) | 0.0558 (13) | 0.0491 (12) | −0.0020 (10) | 0.0070 (10) | −0.0089 (10) |
C7 | 0.0542 (14) | 0.0773 (19) | 0.0663 (15) | 0.0042 (13) | 0.0106 (12) | −0.0189 (15) |
C8 | 0.0705 (19) | 0.128 (3) | 0.0583 (18) | −0.001 (2) | 0.0171 (16) | −0.0234 (19) |
C9 | 0.0677 (19) | 0.140 (4) | 0.0504 (16) | −0.031 (2) | 0.0072 (14) | 0.005 (2) |
C10 | 0.0623 (16) | 0.087 (2) | 0.0541 (14) | −0.0195 (15) | −0.0074 (13) | 0.0098 (14) |
C11 | 0.0442 (11) | 0.0583 (14) | 0.0478 (12) | −0.0100 (10) | −0.0031 (10) | −0.0029 (11) |
C12 | 0.081 (2) | 0.0666 (17) | 0.097 (2) | 0.0052 (16) | −0.0252 (18) | 0.0046 (16) |
C13 | 0.0620 (15) | 0.0673 (17) | 0.0819 (18) | 0.0051 (13) | 0.0077 (14) | −0.0183 (16) |
C14 | 0.077 (2) | 0.0482 (15) | 0.174 (4) | −0.0146 (14) | 0.024 (2) | −0.018 (2) |
C15 | 0.0412 (11) | 0.0547 (13) | 0.0590 (13) | 0.0080 (10) | 0.0036 (11) | 0.0126 (11) |
C16 | 0.0731 (17) | 0.0651 (17) | 0.0538 (14) | −0.0065 (14) | −0.0021 (13) | 0.0170 (13) |
C17 | 0.091 (2) | 0.0607 (17) | 0.0764 (19) | −0.0149 (15) | −0.0173 (16) | 0.0148 (15) |
C18 | 0.0755 (18) | 0.0681 (18) | 0.0730 (17) | 0.0079 (16) | −0.0034 (15) | −0.0024 (16) |
C19 | 0.079 (2) | 0.092 (2) | 0.0674 (17) | 0.0025 (17) | 0.0194 (16) | −0.0025 (17) |
C20 | 0.0712 (17) | 0.0671 (18) | 0.0717 (17) | −0.0057 (14) | 0.0213 (15) | 0.0072 (14) |
C21 | 0.144 (4) | 0.103 (3) | 0.104 (3) | 0.019 (3) | −0.017 (3) | −0.032 (2) |
S1—O2 | 1.430 (2) | C10—C11 | 1.394 (3) |
S1—O1 | 1.434 (2) | C10—H10 | 0.9300 |
S1—N5 | 1.623 (2) | C12—H12A | 0.9600 |
S1—C15 | 1.761 (3) | C12—H12B | 0.9600 |
N1—C11 | 1.395 (3) | C12—H12C | 0.9600 |
N1—C2 | 1.478 (3) | C13—H13A | 0.9600 |
N1—H1 | 0.75 (3) | C13—H13B | 0.9600 |
C2—C12 | 1.519 (4) | C13—H13C | 0.9600 |
C2—C13 | 1.526 (4) | C14—H14A | 0.9600 |
C2—C3 | 1.525 (3) | C14—H14B | 0.9600 |
C3—C4 | 1.515 (4) | C14—H14C | 0.9600 |
C3—H3A | 0.9700 | C15—C20 | 1.368 (4) |
C3—H3B | 0.9700 | C15—C16 | 1.385 (4) |
C4—N5 | 1.493 (3) | C16—C17 | 1.366 (4) |
C4—C14 | 1.522 (4) | C16—H16 | 0.9300 |
C4—H4 | 0.9800 | C17—C18 | 1.380 (4) |
N5—C6 | 1.433 (3) | C17—H17 | 0.9300 |
C6—C7 | 1.382 (3) | C18—C19 | 1.375 (4) |
C6—C11 | 1.397 (3) | C18—C21 | 1.510 (5) |
C7—C8 | 1.387 (5) | C19—C20 | 1.379 (4) |
C7—H7 | 0.9300 | C19—H19 | 0.9300 |
C8—C9 | 1.359 (5) | C20—H20 | 0.9300 |
C8—H8 | 0.9300 | C21—H21A | 0.9600 |
C9—C10 | 1.378 (5) | C21—H21B | 0.9600 |
C9—H9 | 0.9300 | C21—H21C | 0.9600 |
O2—S1—O1 | 119.16 (14) | N1—C11—C10 | 121.6 (2) |
O2—S1—N5 | 107.96 (13) | N1—C11—C6 | 120.6 (2) |
O1—S1—N5 | 107.36 (11) | C10—C11—C6 | 117.6 (2) |
O2—S1—C15 | 106.71 (12) | C2—C12—H12A | 109.5 |
O1—S1—C15 | 107.67 (14) | C2—C12—H12B | 109.5 |
N5—S1—C15 | 107.48 (10) | H12A—C12—H12B | 109.5 |
C11—N1—C2 | 121.86 (19) | C2—C12—H12C | 109.5 |
C11—N1—H1 | 109 (2) | H12A—C12—H12C | 109.5 |
C2—N1—H1 | 112 (3) | H12B—C12—H12C | 109.5 |
N1—C2—C12 | 109.2 (2) | C2—C13—H13A | 109.5 |
N1—C2—C13 | 107.8 (2) | C2—C13—H13B | 109.5 |
C12—C2—C13 | 108.9 (2) | H13A—C13—H13B | 109.5 |
N1—C2—C3 | 111.42 (19) | C2—C13—H13C | 109.5 |
C12—C2—C3 | 107.3 (2) | H13A—C13—H13C | 109.5 |
C13—C2—C3 | 112.2 (2) | H13B—C13—H13C | 109.5 |
C4—C3—C2 | 118.8 (2) | C4—C14—H14A | 109.5 |
C4—C3—H3A | 107.6 | C4—C14—H14B | 109.5 |
C2—C3—H3A | 107.6 | H14A—C14—H14B | 109.5 |
C4—C3—H3B | 107.6 | C4—C14—H14C | 109.5 |
C2—C3—H3B | 107.6 | H14A—C14—H14C | 109.5 |
H3A—C3—H3B | 107.0 | H14B—C14—H14C | 109.5 |
N5—C4—C3 | 110.93 (19) | C20—C15—C16 | 119.8 (3) |
N5—C4—C14 | 110.3 (2) | C20—C15—S1 | 121.1 (2) |
C3—C4—C14 | 109.5 (3) | C16—C15—S1 | 119.09 (19) |
N5—C4—H4 | 108.7 | C17—C16—C15 | 118.9 (3) |
C3—C4—H4 | 108.7 | C17—C16—H16 | 120.6 |
C14—C4—H4 | 108.7 | C15—C16—H16 | 120.6 |
C6—N5—C4 | 119.9 (2) | C16—C17—C18 | 122.7 (3) |
C6—N5—S1 | 120.68 (16) | C16—C17—H17 | 118.7 |
C4—N5—S1 | 119.08 (17) | C18—C17—H17 | 118.7 |
C7—C6—C11 | 120.9 (2) | C19—C18—C17 | 117.2 (3) |
C7—C6—N5 | 119.2 (2) | C19—C18—C21 | 121.9 (3) |
C11—C6—N5 | 119.8 (2) | C17—C18—C21 | 120.9 (3) |
C6—C7—C8 | 120.0 (3) | C18—C19—C20 | 121.5 (3) |
C6—C7—H7 | 120.0 | C18—C19—H19 | 119.3 |
C8—C7—H7 | 120.0 | C20—C19—H19 | 119.3 |
C9—C8—C7 | 119.6 (3) | C15—C20—C19 | 120.0 (3) |
C9—C8—H8 | 120.2 | C15—C20—H20 | 120.0 |
C7—C8—H8 | 120.2 | C19—C20—H20 | 120.0 |
C8—C9—C10 | 121.0 (3) | C18—C21—H21A | 109.5 |
C8—C9—H9 | 119.5 | C18—C21—H21B | 109.5 |
C10—C9—H9 | 119.5 | H21A—C21—H21B | 109.5 |
C9—C10—C11 | 120.8 (3) | C18—C21—H21C | 109.5 |
C9—C10—H10 | 119.6 | H21A—C21—H21C | 109.5 |
C11—C10—H10 | 119.6 | H21B—C21—H21C | 109.5 |
C11—N1—C2—C12 | −95.9 (3) | C8—C9—C10—C11 | 1.7 (4) |
C11—N1—C2—C13 | 145.9 (2) | C2—N1—C11—C10 | 123.8 (3) |
C11—N1—C2—C3 | 22.4 (3) | C2—N1—C11—C6 | −62.0 (3) |
N1—C2—C3—C4 | 61.1 (3) | C9—C10—C11—N1 | 175.7 (2) |
C12—C2—C3—C4 | −179.4 (2) | C9—C10—C11—C6 | 1.3 (4) |
C13—C2—C3—C4 | −59.8 (3) | C7—C6—C11—N1 | −178.1 (2) |
C2—C3—C4—N5 | −57.2 (3) | N5—C6—C11—N1 | −0.7 (3) |
C2—C3—C4—C14 | −179.3 (2) | C7—C6—C11—C10 | −3.7 (3) |
C3—C4—N5—C6 | −27.7 (3) | N5—C6—C11—C10 | 173.7 (2) |
C14—C4—N5—C6 | 93.9 (3) | O2—S1—C15—C20 | −1.4 (3) |
C3—C4—N5—S1 | 145.32 (18) | O1—S1—C15—C20 | −130.5 (2) |
C14—C4—N5—S1 | −93.1 (3) | N5—S1—C15—C20 | 114.2 (2) |
O2—S1—N5—C6 | −146.99 (18) | O2—S1—C15—C16 | 177.6 (2) |
O1—S1—N5—C6 | −17.3 (2) | O1—S1—C15—C16 | 48.5 (2) |
C15—S1—N5—C6 | 98.24 (18) | N5—S1—C15—C16 | −66.8 (2) |
O2—S1—N5—C4 | 40.06 (19) | C20—C15—C16—C17 | −1.0 (4) |
O1—S1—N5—C4 | 169.70 (18) | S1—C15—C16—C17 | −180.0 (2) |
C15—S1—N5—C4 | −74.71 (19) | C15—C16—C17—C18 | −0.1 (4) |
C4—N5—C6—C7 | −116.8 (2) | C16—C17—C18—C19 | 1.0 (4) |
S1—N5—C6—C7 | 70.3 (3) | C16—C17—C18—C21 | −178.9 (3) |
C4—N5—C6—C11 | 65.7 (3) | C17—C18—C19—C20 | −0.8 (5) |
S1—N5—C6—C11 | −107.2 (2) | C21—C18—C19—C20 | 179.1 (3) |
C11—C6—C7—C8 | 3.2 (4) | C16—C15—C20—C19 | 1.2 (4) |
N5—C6—C7—C8 | −174.3 (2) | S1—C15—C20—C19 | −179.8 (2) |
C6—C7—C8—C9 | −0.1 (4) | C18—C19—C20—C15 | −0.3 (5) |
C7—C8—C9—C10 | −2.3 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
C20—H20···O2 | 0.93 | 2.51 | 2.885 (4) | 105 |
N1—H1···O2i | 0.75 (3) | 2.52 (3) | 3.268 (3) | 176 (3) |
C14—H14B···O1ii | 0.96 | 2.58 | 3.436 (4) | 149 |
C13—H13A···Cg2 | 0.96 | 2.90 | 3.759 (3) | 150 |
C19—H19···Cg2i | 0.93 | 2.90 | 3.519 (3) | 126 |
Symmetry codes: (i) −x, y+1/2, −z+3/2; (ii) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C19H24N2O2S |
Mr | 344.46 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 7.3658 (3), 14.8013 (8), 17.4556 (10) |
V (Å3) | 1903.07 (17) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.18 |
Crystal size (mm) | 0.25 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.957, 0.964 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13544, 5154, 3278 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.691 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.145, 1.04 |
No. of reflections | 5154 |
No. of parameters | 224 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.18, −0.19 |
Absolute structure | Flack (1983), 2171 Friedel pairs |
Absolute structure parameter | −0.12 (9) |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C20—H20···O2 | 0.93 | 2.51 | 2.885 (4) | 104.7 |
N1—H1···O2i | 0.75 (3) | 2.52 (3) | 3.268 (3) | 176 (3) |
C14—H14B···O1ii | 0.96 | 2.58 | 3.436 (4) | 148.6 |
C13—H13A···Cg2 | 0.96 | 2.8987 | 3.7592 (31) | 149.77 |
C19—H19···Cg2i | 0.93 | 2.8965 | 3.5192 (34) | 125.53 |
Symmetry codes: (i) −x, y+1/2, −z+3/2; (ii) x−1, y, z. |
Acknowledgements
KR thanks Dr Babu Varghese, SAIF, IIT-Madras, India, for his help with the data collection and the management of Kandaswami Kandar's College, Velur, Namakkal, India, for their encouragement to pursue the programme.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Benzodiazepines are known for their natural occurrence in filamentous fungi and actinomycetes of the genera pencillium, aspergillus and streptomyces. Benzodiazepines from aspergillus include asperlicin, which is used for treatment of gastrointestinal and central nervous system (CNS) disorders (Rahbaek et al., 1999). In view of these importance and to ascertain the molecular conformation, a crystallographic study of the title compound has been carried out.
The ORTEP diagram of the title compound is shown in Fig.1. The benzodiazepine ring adopts a distorted boat conformation. The puckering parameters (Cremer & Pople, 1975) and the asymmetry parameters (Nardelli, 1983) for this ring are q2 = 0.976 (3) Å, q3 = 0.068 (3) Å, ϕ2 = 152.5 (2)°, ϕ3 = 30.0 (1)° and Δ2(C4)=7.8 (1)°. Atom S takes up a distorted tetrahedral geometry, with the O—S—O and N—S—C angles deviating significantly from ideal values, and this may be attributed to the Thorpe-Ingold effect (Bassindale, 1984). The sum of the bond angles at N1 (342.9°) of the benzodiazepine ring is in accordance with sp3 hybridization, whereas the one at N5(359.7°) is in sp2 hybridization, respectively.
The crystal packing is controlled by C—H···O, N—H···O and C—H···π types of intra and intermolecular interactions. Atom N1 at (x, y, z) donates a proton to O1 (-x, y + 1/2, -z + 1/2 + 1), which forms a one-dimesional C7 chain (Bernstein et al., 1995) running along b–axis. The intermolecular hydrogen bond C14—H14B···O1 connects the molecule into a C6 one dimensional chain running along a–axis as shown in Fig 2. The methyl group H atom in the benzodiazepine ring interacts with the centroid atom of the toluenesulfonyl ring through an intramolecular C—H···π interaction involving atom C13, the separation between H13A and the centroid (Cg2) of the ring (C15/C16/C17/C18/C19/C20) being 2.899 Å.