organic compounds
6,6′-Diamino-1,1′,3,3′-tetramethyl-5,5′-(4-chlorobenzylidene)bis[pyrimidine-2,4(1H,3H)-dione]
aDepartment of Chemical Sciences, Tezpur University, Tezpur 784 028, India, and bDepartment of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, India
*Correspondence e-mail: ashim@tezu.ernet.in
The title compound, C19H21ClN6O4, is a 1:2 adduct of p-chlorobenzaldehyde and uracil. It crystallizes with two molecules in the The two uracil units in the same molecule are connected by a pair of strong N—H⋯O hydrogen bonds. The packing is stabilized by N—H⋯O, C—H⋯O and C—H⋯N interactions.
Related literature
For the biological activity and medicinal applications of et al. (2007); Jain et al. (2006). The title compound was synthesized from 6-amino- 1,3-dimethylpyrimidine-2,4(1H, 3H)-dione, which is an important building block, see: Blicke & Godt (1954); Das et al. (2008).
especially pyrimidine derivatives, see: ZhengExperimental
Crystal data
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Data collection
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008); software used to prepare material for publication: PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809035818/bt5045sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809035818/bt5045Isup2.hkl
Distilled water was added in excess to 6-Amino-1,3-dimethylpyrimidine-2,4(1H,3H) -dione (2 mmol) in order to dissolve it completely in a stirring condition. Then, p-chlorobenzaldehyde was added until a precipitate appeared. After 1 hr of stirring the product was filtered and purified by
The product was recrystallized by using distilled ethanol, yielding suitable crystals for data collection.All hydrogen atoms were found in difference Fourier maps. They were refined using a riding model with N-H = 0.86 Å, Caromatic-H = 0.93 Å, Cmethyl-H = 0.96 Å, Ctertiary-H = 0.98 Å and with U(H) set to 1.2 Ueq(C,N) or 1.5 Ueq(Cmethyl).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. An ORTEP view of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 30% probability level and H atoms are shown as small spheres of arbitrary radii. |
C19H21ClN6O4 | Dx = 1.472 Mg m−3 |
Mr = 432.87 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 9985 reflections |
a = 11.5365 (3) Å | θ = 2.2–25.7° |
b = 14.5935 (4) Å | µ = 0.24 mm−1 |
c = 23.2102 (6) Å | T = 293 K |
V = 3907.62 (18) Å3 | Blocks, colorless |
Z = 8 | 0.40 × 0.28 × 0.16 mm |
F(000) = 1808 |
Bruker SMART CCD area-detector diffractometer | 6901 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.038 |
Graphite monochromator | θmax = 28.4°, θmin = 1.7° |
ϕ and ω scans | h = −15→15 |
53787 measured reflections | k = −19→19 |
9742 independent reflections | l = −30→30 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.056 | H-atom parameters constrained |
wR(F2) = 0.166 | w = 1/[σ2(Fo2) + (0.09P)2 + 0.7964P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
9742 reflections | Δρmax = 1.27 e Å−3 |
549 parameters | Δρmin = −0.28 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 4345 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.15 (8) |
C19H21ClN6O4 | V = 3907.62 (18) Å3 |
Mr = 432.87 | Z = 8 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 11.5365 (3) Å | µ = 0.24 mm−1 |
b = 14.5935 (4) Å | T = 293 K |
c = 23.2102 (6) Å | 0.40 × 0.28 × 0.16 mm |
Bruker SMART CCD area-detector diffractometer | 6901 reflections with I > 2σ(I) |
53787 measured reflections | Rint = 0.038 |
9742 independent reflections |
R[F2 > 2σ(F2)] = 0.056 | H-atom parameters constrained |
wR(F2) = 0.166 | Δρmax = 1.27 e Å−3 |
S = 1.06 | Δρmin = −0.28 e Å−3 |
9742 reflections | Absolute structure: Flack (1983), 4345 Friedel pairs |
549 parameters | Absolute structure parameter: 0.15 (8) |
0 restraints |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.87268 (9) | 0.84719 (7) | 0.14783 (4) | 0.0691 (3) | |
Cl2 | 0.62621 (10) | 0.67886 (8) | 0.36362 (6) | 0.0842 (4) | |
O8 | 1.06232 (19) | 0.88990 (14) | 0.27567 (9) | 0.0449 (5) | |
N10 | 0.9975 (2) | 1.12225 (16) | 0.18849 (10) | 0.0409 (6) | |
C27 | 0.9774 (3) | 1.0599 (2) | 0.38507 (12) | 0.0388 (6) | |
O1 | 0.43437 (19) | 0.63236 (14) | 0.23040 (9) | 0.0462 (5) | |
N11 | 1.0865 (2) | 0.97903 (16) | 0.19627 (10) | 0.0384 (5) | |
N6 | 0.3816 (2) | 0.59997 (17) | 0.11616 (11) | 0.0452 (6) | |
H6A | 0.3264 | 0.6301 | 0.1000 | 0.054* | |
H6B | 0.4096 | 0.6184 | 0.1485 | 0.054* | |
N2 | 0.4159 (2) | 0.53819 (17) | 0.30849 (10) | 0.0392 (6) | |
C11 | 0.4596 (3) | 0.55679 (19) | 0.25331 (12) | 0.0362 (6) | |
C14 | 0.5145 (3) | 0.4746 (2) | 0.11458 (12) | 0.0403 (7) | |
C36 | 1.0386 (2) | 0.96383 (19) | 0.25117 (12) | 0.0351 (6) | |
C3 | 0.6561 (3) | 0.6419 (2) | 0.11131 (12) | 0.0402 (6) | |
H3 | 0.6126 | 0.6229 | 0.0798 | 0.048* | |
N1 | 0.5063 (2) | 0.39511 (16) | 0.31134 (10) | 0.0386 (6) | |
C10 | 0.4440 (3) | 0.4624 (2) | 0.34031 (13) | 0.0396 (6) | |
O7 | 1.0992 (2) | 1.06161 (18) | 0.11334 (10) | 0.0649 (7) | |
O6 | 0.8555 (2) | 1.19062 (15) | 0.38902 (10) | 0.0514 (5) | |
C9 | 0.5423 (2) | 0.40516 (19) | 0.25483 (11) | 0.0338 (6) | |
C1 | 0.5849 (3) | 0.50156 (19) | 0.16763 (12) | 0.0371 (6) | |
H1 | 0.6471 | 0.4558 | 0.1680 | 0.044* | |
C30 | 0.9395 (3) | 1.1447 (2) | 0.40763 (13) | 0.0421 (7) | |
N9 | 1.1133 (2) | 0.93617 (19) | 0.38994 (12) | 0.0477 (6) | |
H9A | 1.1693 | 0.9094 | 0.4076 | 0.057* | |
H9B | 1.0852 | 0.9126 | 0.3590 | 0.057* | |
C20 | 0.9093 (2) | 1.02501 (19) | 0.33366 (12) | 0.0353 (6) | |
H20 | 0.8455 | 1.0691 | 0.3310 | 0.042* | |
C34 | 0.9553 (3) | 1.11502 (19) | 0.24430 (12) | 0.0355 (6) | |
O4 | 0.6321 (3) | 0.34234 (19) | 0.10500 (11) | 0.0808 (10) | |
C33 | 0.9683 (3) | 1.03421 (19) | 0.27454 (12) | 0.0345 (6) | |
N3 | 0.5937 (2) | 0.33165 (16) | 0.23116 (11) | 0.0435 (6) | |
H3A | 0.6195 | 0.3343 | 0.1964 | 0.052* | |
H3B | 0.6009 | 0.2819 | 0.2507 | 0.052* | |
N5 | 0.3759 (2) | 0.49787 (19) | 0.03907 (11) | 0.0450 (6) | |
O2 | 0.4133 (3) | 0.45193 (18) | 0.38953 (10) | 0.0665 (7) | |
C17 | 0.4243 (3) | 0.5239 (2) | 0.09087 (13) | 0.0398 (7) | |
N12 | 0.9021 (2) | 1.18920 (17) | 0.26519 (11) | 0.0446 (6) | |
H12A | 0.8735 | 1.1884 | 0.2994 | 0.054* | |
H12B | 0.8965 | 1.2378 | 0.2444 | 0.054* | |
C8 | 0.5272 (3) | 0.48760 (19) | 0.22656 (12) | 0.0357 (6) | |
C24 | 0.7074 (3) | 0.7778 (2) | 0.35625 (15) | 0.0497 (8) | |
C21 | 0.8455 (2) | 0.93356 (19) | 0.34220 (12) | 0.0347 (6) | |
N8 | 0.9983 (2) | 1.1785 (2) | 0.45592 (11) | 0.0516 (7) | |
C2 | 0.6515 (2) | 0.59179 (19) | 0.16235 (12) | 0.0369 (6) | |
N7 | 1.1188 (2) | 1.0487 (2) | 0.46059 (11) | 0.0511 (7) | |
C35 | 1.0637 (3) | 1.0546 (2) | 0.16289 (13) | 0.0437 (7) | |
C4 | 0.7240 (3) | 0.7190 (2) | 0.10674 (14) | 0.0450 (7) | |
H4 | 0.7253 | 0.7519 | 0.0724 | 0.054* | |
O5 | 1.1412 (2) | 1.1681 (2) | 0.52252 (11) | 0.0755 (8) | |
C7 | 0.7218 (3) | 0.6211 (2) | 0.20748 (13) | 0.0447 (7) | |
H7 | 0.7219 | 0.5882 | 0.2418 | 0.054* | |
C22 | 0.7752 (3) | 0.9018 (2) | 0.29750 (13) | 0.0407 (7) | |
H22 | 0.7749 | 0.9329 | 0.2625 | 0.049* | |
C26 | 0.8422 (3) | 0.8873 (2) | 0.39395 (13) | 0.0405 (7) | |
H26 | 0.8865 | 0.9085 | 0.4247 | 0.049* | |
C12 | 0.5385 (3) | 0.3124 (2) | 0.34431 (14) | 0.0515 (8) | |
H12C | 0.4977 | 0.2604 | 0.3291 | 0.077* | |
H12D | 0.5181 | 0.3207 | 0.3841 | 0.077* | |
H12E | 0.6204 | 0.3023 | 0.3412 | 0.077* | |
O3 | 0.3531 (3) | 0.3928 (2) | −0.03150 (11) | 0.0852 (9) | |
C23 | 0.7055 (3) | 0.8249 (2) | 0.30412 (14) | 0.0471 (7) | |
H23 | 0.6583 | 0.8052 | 0.2741 | 0.057* | |
C5 | 0.7897 (3) | 0.7477 (2) | 0.15242 (14) | 0.0436 (7) | |
C15 | 0.5501 (4) | 0.3921 (3) | 0.08698 (13) | 0.0562 (9) | |
C6 | 0.7909 (3) | 0.6971 (2) | 0.20284 (14) | 0.0488 (8) | |
H6 | 0.8382 | 0.7146 | 0.2334 | 0.059* | |
C16 | 0.4053 (4) | 0.4160 (3) | 0.01292 (15) | 0.0588 (10) | |
C25 | 0.7737 (3) | 0.8091 (2) | 0.40128 (15) | 0.0487 (8) | |
H25 | 0.7731 | 0.7785 | 0.4364 | 0.058* | |
N4 | 0.4919 (3) | 0.3658 (2) | 0.03778 (11) | 0.0617 (9) | |
C29 | 1.0896 (3) | 1.1343 (3) | 0.48273 (14) | 0.0561 (9) | |
C28 | 1.0693 (3) | 1.0151 (2) | 0.41075 (13) | 0.0432 (7) | |
C37 | 0.9705 (4) | 1.2031 (2) | 0.15333 (14) | 0.0581 (9) | |
H37A | 1.0169 | 1.2539 | 0.1659 | 0.087* | |
H37B | 0.8899 | 1.2181 | 0.1575 | 0.087* | |
H37C | 0.9870 | 1.1901 | 0.1136 | 0.087* | |
C13 | 0.3377 (3) | 0.6053 (2) | 0.33519 (14) | 0.0520 (8) | |
H13A | 0.2920 | 0.5757 | 0.3643 | 0.078* | |
H13B | 0.2875 | 0.6307 | 0.3063 | 0.078* | |
H13C | 0.3825 | 0.6535 | 0.3524 | 0.078* | |
C38 | 1.1673 (3) | 0.9112 (2) | 0.17263 (15) | 0.0513 (8) | |
H38A | 1.1296 | 0.8771 | 0.1426 | 0.077* | |
H38B | 1.1914 | 0.8702 | 0.2027 | 0.077* | |
H38C | 1.2339 | 0.9420 | 0.1571 | 0.077* | |
C19 | 0.2869 (3) | 0.5538 (3) | 0.00979 (15) | 0.0596 (9) | |
H19A | 0.2140 | 0.5468 | 0.0292 | 0.089* | |
H19B | 0.2792 | 0.5340 | −0.0295 | 0.089* | |
H19C | 0.3096 | 0.6171 | 0.0106 | 0.089* | |
C31 | 1.2062 (4) | 0.9963 (3) | 0.49141 (17) | 0.0708 (12) | |
H31A | 1.1736 | 0.9392 | 0.5039 | 0.106* | |
H31B | 1.2320 | 1.0305 | 0.5243 | 0.106* | |
H31C | 1.2708 | 0.9847 | 0.4664 | 0.106* | |
C32 | 0.9631 (4) | 1.2684 (3) | 0.47975 (17) | 0.0706 (12) | |
H32A | 0.9899 | 1.2736 | 0.5188 | 0.106* | |
H32B | 0.8801 | 1.2733 | 0.4790 | 0.106* | |
H32C | 0.9963 | 1.3166 | 0.4569 | 0.106* | |
C18 | 0.5258 (6) | 0.2797 (3) | 0.01056 (19) | 0.109 (2) | |
H18A | 0.4577 | 0.2460 | −0.0002 | 0.163* | |
H18B | 0.5710 | 0.2441 | 0.0371 | 0.163* | |
H18C | 0.5712 | 0.2924 | −0.0232 | 0.163* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0614 (6) | 0.0759 (6) | 0.0700 (6) | −0.0308 (5) | 0.0047 (5) | −0.0041 (5) |
Cl2 | 0.0732 (7) | 0.0615 (6) | 0.1179 (9) | −0.0344 (5) | −0.0091 (6) | 0.0144 (6) |
O8 | 0.0568 (14) | 0.0364 (11) | 0.0415 (11) | 0.0065 (10) | 0.0041 (10) | −0.0002 (9) |
N10 | 0.0547 (15) | 0.0348 (12) | 0.0331 (12) | −0.0055 (11) | 0.0044 (11) | 0.0006 (10) |
C27 | 0.0420 (16) | 0.0391 (15) | 0.0353 (14) | −0.0089 (13) | 0.0064 (13) | −0.0026 (12) |
O1 | 0.0599 (14) | 0.0363 (11) | 0.0422 (11) | 0.0113 (10) | 0.0016 (10) | 0.0011 (9) |
N11 | 0.0389 (13) | 0.0387 (13) | 0.0374 (13) | −0.0029 (10) | 0.0045 (11) | −0.0033 (10) |
N6 | 0.0435 (14) | 0.0437 (14) | 0.0484 (14) | 0.0042 (11) | −0.0080 (12) | −0.0082 (12) |
N2 | 0.0410 (13) | 0.0387 (13) | 0.0380 (13) | 0.0004 (11) | 0.0074 (11) | −0.0024 (10) |
C11 | 0.0424 (16) | 0.0326 (14) | 0.0334 (14) | −0.0011 (12) | 0.0020 (13) | 0.0027 (11) |
C14 | 0.0546 (18) | 0.0343 (14) | 0.0321 (14) | 0.0010 (13) | 0.0075 (13) | −0.0004 (11) |
C36 | 0.0352 (15) | 0.0343 (14) | 0.0357 (14) | −0.0028 (12) | −0.0006 (12) | −0.0055 (11) |
C3 | 0.0405 (16) | 0.0462 (16) | 0.0340 (14) | −0.0016 (13) | −0.0024 (13) | 0.0045 (13) |
N1 | 0.0491 (15) | 0.0311 (12) | 0.0357 (12) | −0.0046 (10) | 0.0015 (11) | 0.0034 (10) |
C10 | 0.0431 (16) | 0.0417 (16) | 0.0339 (15) | −0.0028 (13) | 0.0063 (13) | 0.0013 (12) |
O7 | 0.0772 (17) | 0.0715 (17) | 0.0459 (13) | 0.0076 (14) | 0.0232 (13) | 0.0079 (12) |
O6 | 0.0567 (14) | 0.0451 (12) | 0.0525 (13) | −0.0015 (11) | 0.0085 (11) | −0.0105 (10) |
C9 | 0.0357 (15) | 0.0337 (14) | 0.0320 (14) | −0.0027 (11) | −0.0005 (12) | 0.0007 (11) |
C1 | 0.0434 (16) | 0.0329 (14) | 0.0349 (14) | 0.0083 (12) | 0.0024 (12) | 0.0035 (11) |
C30 | 0.0435 (17) | 0.0425 (16) | 0.0404 (16) | −0.0154 (14) | 0.0115 (13) | −0.0097 (13) |
N9 | 0.0459 (15) | 0.0518 (15) | 0.0455 (14) | −0.0006 (12) | −0.0062 (12) | −0.0039 (12) |
C20 | 0.0351 (14) | 0.0348 (14) | 0.0360 (14) | −0.0038 (11) | 0.0029 (12) | −0.0021 (11) |
C34 | 0.0368 (15) | 0.0326 (14) | 0.0371 (14) | −0.0045 (11) | −0.0003 (12) | −0.0028 (11) |
O4 | 0.137 (3) | 0.0604 (16) | 0.0452 (13) | 0.0466 (18) | −0.0001 (16) | −0.0088 (12) |
C33 | 0.0406 (16) | 0.0334 (14) | 0.0296 (13) | −0.0047 (12) | 0.0039 (12) | −0.0051 (11) |
N3 | 0.0613 (16) | 0.0313 (12) | 0.0380 (13) | 0.0064 (12) | 0.0050 (12) | 0.0043 (10) |
N5 | 0.0443 (15) | 0.0530 (15) | 0.0377 (13) | −0.0016 (12) | 0.0070 (11) | −0.0035 (12) |
O2 | 0.094 (2) | 0.0638 (16) | 0.0421 (13) | 0.0103 (14) | 0.0229 (14) | 0.0082 (12) |
C17 | 0.0417 (16) | 0.0396 (15) | 0.0381 (15) | −0.0061 (13) | 0.0102 (13) | 0.0025 (12) |
N12 | 0.0573 (16) | 0.0337 (12) | 0.0430 (13) | 0.0029 (12) | 0.0063 (12) | 0.0026 (11) |
C8 | 0.0404 (16) | 0.0322 (14) | 0.0347 (14) | 0.0013 (12) | 0.0014 (12) | 0.0024 (11) |
C24 | 0.0365 (16) | 0.0418 (16) | 0.071 (2) | −0.0085 (13) | 0.0025 (16) | 0.0015 (16) |
C21 | 0.0331 (14) | 0.0334 (14) | 0.0375 (14) | −0.0017 (11) | 0.0027 (12) | −0.0010 (11) |
N8 | 0.0562 (17) | 0.0572 (17) | 0.0415 (14) | −0.0141 (14) | 0.0102 (13) | −0.0173 (13) |
C2 | 0.0369 (15) | 0.0382 (15) | 0.0355 (14) | 0.0087 (12) | 0.0068 (12) | 0.0019 (11) |
N7 | 0.0448 (15) | 0.0738 (19) | 0.0347 (13) | −0.0116 (14) | −0.0010 (12) | −0.0082 (13) |
C35 | 0.0463 (17) | 0.0463 (17) | 0.0386 (16) | −0.0049 (13) | 0.0045 (14) | −0.0058 (13) |
C4 | 0.0391 (16) | 0.0514 (18) | 0.0446 (16) | −0.0070 (14) | 0.0058 (14) | 0.0097 (14) |
O5 | 0.0670 (17) | 0.109 (2) | 0.0505 (14) | −0.0212 (17) | −0.0030 (13) | −0.0290 (15) |
C7 | 0.0473 (18) | 0.0517 (18) | 0.0351 (15) | 0.0068 (15) | −0.0039 (13) | 0.0084 (14) |
C22 | 0.0403 (16) | 0.0426 (16) | 0.0393 (15) | −0.0019 (13) | −0.0062 (13) | −0.0013 (13) |
C26 | 0.0352 (15) | 0.0451 (16) | 0.0411 (15) | −0.0064 (13) | −0.0025 (13) | 0.0019 (13) |
C12 | 0.077 (2) | 0.0342 (15) | 0.0434 (16) | 0.0047 (15) | 0.0043 (17) | 0.0115 (13) |
O3 | 0.111 (2) | 0.097 (2) | 0.0483 (15) | 0.003 (2) | −0.0025 (16) | −0.0330 (15) |
C23 | 0.0373 (16) | 0.0462 (18) | 0.0578 (19) | −0.0046 (14) | −0.0075 (14) | −0.0057 (15) |
C5 | 0.0323 (15) | 0.0494 (17) | 0.0492 (17) | −0.0044 (13) | 0.0040 (14) | −0.0009 (14) |
C15 | 0.083 (3) | 0.052 (2) | 0.0332 (16) | 0.0119 (19) | 0.0099 (17) | 0.0019 (14) |
C6 | 0.0408 (17) | 0.058 (2) | 0.0476 (18) | 0.0013 (15) | −0.0088 (14) | −0.0032 (15) |
C16 | 0.069 (2) | 0.069 (2) | 0.0384 (17) | −0.009 (2) | 0.0109 (17) | −0.0094 (17) |
C25 | 0.0457 (17) | 0.0458 (18) | 0.0546 (19) | −0.0040 (14) | −0.0005 (15) | 0.0139 (15) |
N4 | 0.099 (3) | 0.0522 (17) | 0.0336 (13) | 0.0071 (17) | 0.0081 (15) | −0.0124 (13) |
C29 | 0.059 (2) | 0.074 (2) | 0.0352 (16) | −0.0236 (19) | 0.0099 (16) | −0.0163 (17) |
C28 | 0.0427 (17) | 0.0527 (19) | 0.0341 (15) | −0.0165 (14) | 0.0045 (13) | −0.0025 (13) |
C37 | 0.089 (3) | 0.0460 (19) | 0.0389 (16) | −0.0015 (18) | 0.0128 (18) | 0.0104 (14) |
C13 | 0.0527 (19) | 0.0535 (19) | 0.0497 (18) | 0.0154 (16) | 0.0073 (16) | −0.0052 (15) |
C38 | 0.0471 (18) | 0.054 (2) | 0.0532 (19) | 0.0068 (15) | 0.0106 (16) | −0.0085 (15) |
C19 | 0.052 (2) | 0.084 (3) | 0.0426 (17) | −0.0011 (19) | −0.0005 (16) | 0.0002 (18) |
C31 | 0.064 (3) | 0.093 (3) | 0.055 (2) | −0.001 (2) | −0.0132 (19) | −0.010 (2) |
C32 | 0.084 (3) | 0.065 (2) | 0.063 (2) | −0.016 (2) | 0.021 (2) | −0.035 (2) |
C18 | 0.193 (6) | 0.074 (3) | 0.059 (3) | 0.043 (4) | 0.000 (3) | −0.032 (2) |
Cl1—C5 | 1.743 (3) | N12—H12A | 0.8600 |
Cl2—C24 | 1.730 (3) | N12—H12B | 0.8600 |
O8—C36 | 1.250 (3) | C24—C25 | 1.373 (5) |
N10—C35 | 1.383 (4) | C24—C23 | 1.392 (5) |
N10—C34 | 1.388 (4) | C21—C26 | 1.379 (4) |
N10—C37 | 1.468 (4) | C21—C22 | 1.396 (4) |
C27—C28 | 1.381 (5) | N8—C29 | 1.383 (5) |
C27—C30 | 1.414 (4) | N8—C32 | 1.481 (4) |
C27—C20 | 1.517 (4) | C2—C7 | 1.392 (4) |
O1—C11 | 1.258 (3) | N7—C28 | 1.380 (4) |
N11—C35 | 1.373 (4) | N7—C29 | 1.393 (5) |
N11—C36 | 1.406 (4) | N7—C31 | 1.454 (5) |
N11—C38 | 1.466 (4) | C4—C5 | 1.369 (4) |
N6—C17 | 1.349 (4) | C4—H4 | 0.9300 |
N6—H6A | 0.8600 | O5—C29 | 1.204 (4) |
N6—H6B | 0.8600 | C7—C6 | 1.369 (5) |
N2—C10 | 1.369 (4) | C7—H7 | 0.9300 |
N2—C11 | 1.403 (4) | C22—C23 | 1.388 (4) |
N2—C13 | 1.469 (4) | C22—H22 | 0.9300 |
C11—C8 | 1.419 (4) | C26—C25 | 1.397 (4) |
C14—C17 | 1.380 (4) | C26—H26 | 0.9300 |
C14—C15 | 1.424 (4) | C12—H12C | 0.9600 |
C14—C1 | 1.527 (4) | C12—H12D | 0.9600 |
C36—C33 | 1.417 (4) | C12—H12E | 0.9600 |
C3—C4 | 1.376 (4) | O3—C16 | 1.241 (4) |
C3—C2 | 1.393 (4) | C23—H23 | 0.9300 |
C3—H3 | 0.9300 | C5—C6 | 1.383 (4) |
N1—C9 | 1.384 (4) | C15—N4 | 1.379 (5) |
N1—C10 | 1.391 (4) | C6—H6 | 0.9300 |
N1—C12 | 1.477 (4) | C16—N4 | 1.367 (5) |
C10—O2 | 1.206 (4) | C25—H25 | 0.9300 |
O7—C35 | 1.225 (4) | N4—C18 | 1.460 (5) |
O6—C30 | 1.254 (4) | C37—H37A | 0.9600 |
C9—N3 | 1.343 (4) | C37—H37B | 0.9600 |
C9—C8 | 1.381 (4) | C37—H37C | 0.9600 |
C1—C2 | 1.530 (4) | C13—H13A | 0.9600 |
C1—C8 | 1.535 (4) | C13—H13B | 0.9600 |
C1—H1 | 0.9800 | C13—H13C | 0.9600 |
C30—N8 | 1.400 (4) | C38—H38A | 0.9600 |
N9—C28 | 1.347 (4) | C38—H38B | 0.9600 |
N9—H9A | 0.8600 | C38—H38C | 0.9600 |
N9—H9B | 0.8600 | C19—H19A | 0.9600 |
C20—C21 | 1.537 (4) | C19—H19B | 0.9600 |
C20—C33 | 1.538 (4) | C19—H19C | 0.9600 |
C20—H20 | 0.9800 | C31—H31A | 0.9600 |
C34—N12 | 1.335 (4) | C31—H31B | 0.9600 |
C34—C33 | 1.380 (4) | C31—H31C | 0.9600 |
O4—C15 | 1.264 (5) | C32—H32A | 0.9600 |
N3—H3A | 0.8600 | C32—H32B | 0.9600 |
N3—H3B | 0.8600 | C32—H32C | 0.9600 |
N5—C17 | 1.379 (4) | C18—H18A | 0.9600 |
N5—C16 | 1.382 (5) | C18—H18B | 0.9600 |
N5—C19 | 1.478 (5) | C18—H18C | 0.9600 |
C35—N10—C34 | 122.7 (2) | O7—C35—N11 | 122.2 (3) |
C35—N10—C37 | 116.9 (2) | O7—C35—N10 | 121.9 (3) |
C34—N10—C37 | 120.4 (3) | N11—C35—N10 | 115.9 (2) |
C28—C27—C30 | 119.5 (3) | C5—C4—C3 | 120.4 (3) |
C28—C27—C20 | 125.3 (3) | C5—C4—H4 | 119.8 |
C30—C27—C20 | 115.1 (3) | C3—C4—H4 | 119.8 |
C35—N11—C36 | 124.2 (2) | C6—C7—C2 | 121.9 (3) |
C35—N11—C38 | 116.9 (3) | C6—C7—H7 | 119.0 |
C36—N11—C38 | 118.8 (3) | C2—C7—H7 | 119.0 |
C17—N6—H6A | 120.0 | C23—C22—C21 | 121.5 (3) |
C17—N6—H6B | 120.0 | C23—C22—H22 | 119.3 |
H6A—N6—H6B | 120.0 | C21—C22—H22 | 119.3 |
C10—N2—C11 | 124.4 (2) | C21—C26—C25 | 121.4 (3) |
C10—N2—C13 | 117.2 (2) | C21—C26—H26 | 119.3 |
C11—N2—C13 | 118.5 (2) | C25—C26—H26 | 119.3 |
O1—C11—N2 | 118.2 (3) | N1—C12—H12C | 109.5 |
O1—C11—C8 | 124.5 (3) | N1—C12—H12D | 109.5 |
N2—C11—C8 | 117.3 (2) | H12C—C12—H12D | 109.5 |
C17—C14—C15 | 118.6 (3) | N1—C12—H12E | 109.5 |
C17—C14—C1 | 126.1 (3) | H12C—C12—H12E | 109.5 |
C15—C14—C1 | 115.3 (3) | H12D—C12—H12E | 109.5 |
O8—C36—N11 | 117.5 (3) | C22—C23—C24 | 119.1 (3) |
O8—C36—C33 | 125.2 (3) | C22—C23—H23 | 120.5 |
N11—C36—C33 | 117.2 (3) | C24—C23—H23 | 120.5 |
C4—C3—C2 | 121.1 (3) | C4—C5—C6 | 119.9 (3) |
C4—C3—H3 | 119.4 | C4—C5—Cl1 | 120.8 (2) |
C2—C3—H3 | 119.4 | C6—C5—Cl1 | 119.4 (2) |
C9—N1—C10 | 122.6 (2) | O4—C15—N4 | 118.6 (3) |
C9—N1—C12 | 120.2 (3) | O4—C15—C14 | 123.6 (3) |
C10—N1—C12 | 117.2 (2) | N4—C15—C14 | 117.9 (3) |
O2—C10—N2 | 123.0 (3) | C7—C6—C5 | 119.5 (3) |
O2—C10—N1 | 121.4 (3) | C7—C6—H6 | 120.2 |
N2—C10—N1 | 115.6 (2) | C5—C6—H6 | 120.2 |
N3—C9—C8 | 123.8 (3) | O3—C16—N4 | 124.0 (4) |
N3—C9—N1 | 115.8 (2) | O3—C16—N5 | 118.8 (4) |
C8—C9—N1 | 120.3 (3) | N4—C16—N5 | 117.2 (3) |
C14—C1—C2 | 115.1 (2) | C24—C25—C26 | 119.6 (3) |
C14—C1—C8 | 117.0 (2) | C24—C25—H25 | 120.2 |
C2—C1—C8 | 113.8 (2) | C26—C25—H25 | 120.2 |
C14—C1—H1 | 102.7 | C16—N4—C15 | 123.8 (3) |
C2—C1—H1 | 102.7 | C16—N4—C18 | 118.4 (4) |
C8—C1—H1 | 102.7 | C15—N4—C18 | 117.9 (4) |
O6—C30—N8 | 117.5 (3) | O5—C29—N8 | 122.1 (4) |
O6—C30—C27 | 125.4 (3) | O5—C29—N7 | 122.1 (4) |
N8—C30—C27 | 117.0 (3) | N8—C29—N7 | 115.9 (3) |
C28—N9—H9A | 120.0 | N9—C28—N7 | 116.7 (3) |
C28—N9—H9B | 120.0 | N9—C28—C27 | 122.6 (3) |
H9A—N9—H9B | 120.0 | N7—C28—C27 | 120.7 (3) |
C27—C20—C21 | 116.0 (2) | N10—C37—H37A | 109.5 |
C27—C20—C33 | 116.3 (2) | N10—C37—H37B | 109.5 |
C21—C20—C33 | 113.8 (2) | H37A—C37—H37B | 109.5 |
C27—C20—H20 | 102.6 | N10—C37—H37C | 109.5 |
C21—C20—H20 | 102.6 | H37A—C37—H37C | 109.5 |
C33—C20—H20 | 102.6 | H37B—C37—H37C | 109.5 |
N12—C34—C33 | 123.9 (3) | N2—C13—H13A | 109.5 |
N12—C34—N10 | 116.0 (2) | N2—C13—H13B | 109.5 |
C33—C34—N10 | 120.1 (3) | H13A—C13—H13B | 109.5 |
C34—C33—C36 | 119.1 (3) | N2—C13—H13C | 109.5 |
C34—C33—C20 | 118.7 (3) | H13A—C13—H13C | 109.5 |
C36—C33—C20 | 122.1 (3) | H13B—C13—H13C | 109.5 |
C9—N3—H3A | 120.0 | N11—C38—H38A | 109.5 |
C9—N3—H3B | 120.0 | N11—C38—H38B | 109.5 |
H3A—N3—H3B | 120.0 | H38A—C38—H38B | 109.5 |
C17—N5—C16 | 121.5 (3) | N11—C38—H38C | 109.5 |
C17—N5—C19 | 122.0 (3) | H38A—C38—H38C | 109.5 |
C16—N5—C19 | 116.5 (3) | H38B—C38—H38C | 109.5 |
N6—C17—N5 | 117.3 (3) | N5—C19—H19A | 109.5 |
N6—C17—C14 | 122.1 (3) | N5—C19—H19B | 109.5 |
N5—C17—C14 | 120.6 (3) | H19A—C19—H19B | 109.5 |
C34—N12—H12A | 120.0 | N5—C19—H19C | 109.5 |
C34—N12—H12B | 120.0 | H19A—C19—H19C | 109.5 |
H12A—N12—H12B | 120.0 | H19B—C19—H19C | 109.5 |
C9—C8—C11 | 118.8 (3) | N7—C31—H31A | 109.5 |
C9—C8—C1 | 119.0 (3) | N7—C31—H31B | 109.5 |
C11—C8—C1 | 122.3 (2) | H31A—C31—H31B | 109.5 |
C25—C24—C23 | 120.4 (3) | N7—C31—H31C | 109.5 |
C25—C24—Cl2 | 120.3 (3) | H31A—C31—H31C | 109.5 |
C23—C24—Cl2 | 119.3 (3) | H31B—C31—H31C | 109.5 |
C26—C21—C22 | 117.9 (3) | N8—C32—H32A | 109.5 |
C26—C21—C20 | 123.4 (3) | N8—C32—H32B | 109.5 |
C22—C21—C20 | 118.1 (3) | H32A—C32—H32B | 109.5 |
C29—N8—C30 | 124.4 (3) | N8—C32—H32C | 109.5 |
C29—N8—C32 | 117.0 (3) | H32A—C32—H32C | 109.5 |
C30—N8—C32 | 118.5 (3) | H32B—C32—H32C | 109.5 |
C7—C2—C3 | 117.1 (3) | N4—C18—H18A | 109.5 |
C7—C2—C1 | 119.8 (3) | N4—C18—H18B | 109.5 |
C3—C2—C1 | 122.6 (3) | H18A—C18—H18B | 109.5 |
C28—N7—C29 | 121.9 (3) | N4—C18—H18C | 109.5 |
C28—N7—C31 | 120.8 (3) | H18A—C18—H18C | 109.5 |
C29—N7—C31 | 117.2 (3) | H18B—C18—H18C | 109.5 |
C10—N2—C11—O1 | −174.5 (3) | C27—C20—C21—C22 | 175.6 (3) |
C13—N2—C11—O1 | 3.5 (4) | C33—C20—C21—C22 | −45.5 (4) |
C10—N2—C11—C8 | 7.0 (4) | O6—C30—N8—C29 | 177.5 (3) |
C13—N2—C11—C8 | −175.0 (3) | C27—C30—N8—C29 | −0.4 (4) |
C35—N11—C36—O8 | 176.5 (3) | O6—C30—N8—C32 | −3.7 (4) |
C38—N11—C36—O8 | −4.3 (4) | C27—C30—N8—C32 | 178.3 (3) |
C35—N11—C36—C33 | −4.1 (4) | C4—C3—C2—C7 | −2.5 (4) |
C38—N11—C36—C33 | 175.0 (3) | C4—C3—C2—C1 | −174.9 (3) |
C11—N2—C10—O2 | 173.3 (3) | C14—C1—C2—C7 | −177.7 (3) |
C13—N2—C10—O2 | −4.7 (5) | C8—C1—C2—C7 | 43.3 (4) |
C11—N2—C10—N1 | −9.5 (4) | C14—C1—C2—C3 | −5.4 (4) |
C13—N2—C10—N1 | 172.4 (3) | C8—C1—C2—C3 | −144.4 (3) |
C9—N1—C10—O2 | 179.8 (3) | C36—N11—C35—O7 | −173.6 (3) |
C12—N1—C10—O2 | −3.0 (5) | C38—N11—C35—O7 | 7.2 (5) |
C9—N1—C10—N2 | 2.6 (4) | C36—N11—C35—N10 | 6.0 (4) |
C12—N1—C10—N2 | 179.8 (3) | C38—N11—C35—N10 | −173.2 (3) |
C10—N1—C9—N3 | −175.0 (3) | C34—N10—C35—O7 | 179.2 (3) |
C12—N1—C9—N3 | 7.9 (4) | C37—N10—C35—O7 | 0.5 (5) |
C10—N1—C9—C8 | 6.6 (4) | C34—N10—C35—N11 | −0.5 (4) |
C12—N1—C9—C8 | −170.5 (3) | C37—N10—C35—N11 | −179.1 (3) |
C17—C14—C1—C2 | −61.2 (4) | C2—C3—C4—C5 | 0.7 (5) |
C15—C14—C1—C2 | 116.5 (3) | C3—C2—C7—C6 | 1.5 (4) |
C17—C14—C1—C8 | 76.4 (4) | C1—C2—C7—C6 | 174.2 (3) |
C15—C14—C1—C8 | −105.8 (3) | C26—C21—C22—C23 | −1.3 (4) |
C28—C27—C30—O6 | −178.1 (3) | C20—C21—C22—C23 | −173.2 (3) |
C20—C27—C30—O6 | 0.8 (4) | C22—C21—C26—C25 | 2.1 (4) |
C28—C27—C30—N8 | −0.3 (4) | C20—C21—C26—C25 | 173.5 (3) |
C20—C27—C30—N8 | 178.6 (2) | C21—C22—C23—C24 | −1.0 (5) |
C28—C27—C20—C21 | 61.2 (4) | C25—C24—C23—C22 | 2.6 (5) |
C30—C27—C20—C21 | −117.7 (3) | Cl2—C24—C23—C22 | −176.9 (2) |
C28—C27—C20—C33 | −76.6 (4) | C3—C4—C5—C6 | 2.2 (5) |
C30—C27—C20—C33 | 104.5 (3) | C3—C4—C5—Cl1 | −178.1 (2) |
C35—N10—C34—N12 | 173.9 (3) | C17—C14—C15—O4 | 179.5 (3) |
C37—N10—C34—N12 | −7.6 (4) | C1—C14—C15—O4 | 1.6 (5) |
C35—N10—C34—C33 | −6.8 (4) | C17—C14—C15—N4 | −0.1 (5) |
C37—N10—C34—C33 | 171.7 (3) | C1—C14—C15—N4 | −178.1 (3) |
N12—C34—C33—C36 | −172.1 (3) | C2—C7—C6—C5 | 1.3 (5) |
N10—C34—C33—C36 | 8.6 (4) | C4—C5—C6—C7 | −3.1 (5) |
N12—C34—C33—C20 | 5.7 (4) | Cl1—C5—C6—C7 | 177.1 (2) |
N10—C34—C33—C20 | −173.5 (2) | C17—N5—C16—O3 | 174.9 (3) |
O8—C36—C33—C34 | 175.9 (3) | C19—N5—C16—O3 | −2.8 (5) |
N11—C36—C33—C34 | −3.4 (4) | C17—N5—C16—N4 | −5.8 (5) |
O8—C36—C33—C20 | −1.9 (4) | C19—N5—C16—N4 | 176.6 (3) |
N11—C36—C33—C20 | 178.8 (2) | C23—C24—C25—C26 | −1.9 (5) |
C27—C20—C33—C34 | −86.8 (3) | Cl2—C24—C25—C26 | 177.6 (2) |
C21—C20—C33—C34 | 134.4 (3) | C21—C26—C25—C24 | −0.5 (5) |
C27—C20—C33—C36 | 90.9 (3) | O3—C16—N4—C15 | 179.6 (4) |
C21—C20—C33—C36 | −47.8 (4) | N5—C16—N4—C15 | 0.3 (5) |
C16—N5—C17—N6 | −173.1 (3) | O3—C16—N4—C18 | 0.2 (6) |
C19—N5—C17—N6 | 4.4 (4) | N5—C16—N4—C18 | −179.1 (4) |
C16—N5—C17—C14 | 8.3 (4) | O4—C15—N4—C16 | −177.1 (4) |
C19—N5—C17—C14 | −174.1 (3) | C14—C15—N4—C16 | 2.6 (5) |
C15—C14—C17—N6 | 176.4 (3) | O4—C15—N4—C18 | 2.3 (6) |
C1—C14—C17—N6 | −5.9 (5) | C14—C15—N4—C18 | −178.0 (4) |
C15—C14—C17—N5 | −5.2 (4) | C30—N8—C29—O5 | 176.4 (3) |
C1—C14—C17—N5 | 172.5 (3) | C32—N8—C29—O5 | −2.4 (5) |
N3—C9—C8—C11 | 172.6 (3) | C30—N8—C29—N7 | −3.1 (4) |
N1—C9—C8—C11 | −9.1 (4) | C32—N8—C29—N7 | 178.1 (3) |
N3—C9—C8—C1 | −7.9 (5) | C28—N7—C29—O5 | −171.8 (3) |
N1—C9—C8—C1 | 170.4 (3) | C31—N7—C29—O5 | 6.6 (5) |
O1—C11—C8—C9 | −175.7 (3) | C28—N7—C29—N8 | 7.7 (4) |
N2—C11—C8—C9 | 2.7 (4) | C31—N7—C29—N8 | −173.8 (3) |
O1—C11—C8—C1 | 4.7 (5) | C29—N7—C28—N9 | 172.9 (3) |
N2—C11—C8—C1 | −176.8 (3) | C31—N7—C28—N9 | −5.6 (4) |
C14—C1—C8—C9 | 90.4 (3) | C29—N7—C28—C27 | −8.8 (4) |
C2—C1—C8—C9 | −131.4 (3) | C31—N7—C28—C27 | 172.8 (3) |
C14—C1—C8—C11 | −90.1 (3) | C30—C27—C28—N9 | −176.9 (3) |
C2—C1—C8—C11 | 48.1 (4) | C20—C27—C28—N9 | 4.2 (5) |
C27—C20—C21—C26 | 4.2 (4) | C30—C27—C28—N7 | 4.8 (4) |
C33—C20—C21—C26 | 143.1 (3) | C20—C27—C28—N7 | −174.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4 | 0.86 | 2.13 | 2.966 (4) | 164 |
N3—H3B···O1i | 0.86 | 2.26 | 3.059 (3) | 154 |
N6—H6A···O6i | 0.86 | 2.29 | 3.041 (3) | 146 |
N6—H6B···O1 | 0.86 | 1.93 | 2.761 (3) | 161 |
N9—H9A···O4ii | 0.86 | 2.51 | 3.243 (4) | 144 |
N9—H9B···O8 | 0.86 | 1.98 | 2.799 (3) | 159 |
N12—H12A···O6 | 0.86 | 2.09 | 2.924 (3) | 163 |
N12—H12B···O8ii | 0.86 | 2.32 | 3.106 (3) | 153 |
C1—H1···O4 | 0.98 | 2.22 | 2.794 (4) | 116 |
C1—H1···N3 | 0.98 | 2.41 | 2.887 (4) | 109 |
C12—H12C···O1i | 0.96 | 2.45 | 3.164 (4) | 131 |
C12—H12D···O2 | 0.96 | 2.27 | 2.708 (4) | 107 |
C12—H12D···O5iii | 0.96 | 2.60 | 3.322 (4) | 133 |
C13—H13A···O2 | 0.96 | 2.36 | 2.713 (4) | 101 |
C18—H18B···O4 | 0.96 | 2.24 | 2.673 (6) | 106 |
C19—H19B···O3 | 0.96 | 2.23 | 2.650 (5) | 105 |
C20—H20···O6 | 0.98 | 2.23 | 2.807 (4) | 116 |
C20—H20···N12 | 0.98 | 2.41 | 2.876 (4) | 108 |
C31—H31B···O5 | 0.96 | 2.27 | 2.715 (5) | 108 |
C32—H32A···O5 | 0.96 | 2.33 | 2.711 (5) | 103 |
C37—H37A···O8ii | 0.96 | 2.57 | 3.208 (4) | 124 |
C37—H37C···O7 | 0.96 | 2.28 | 2.707 (4) | 106 |
C38—H38B···O8 | 0.96 | 2.27 | 2.699 (4) | 106 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+2, y+1/2, −z+1/2; (iii) x−1/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C19H21ClN6O4 |
Mr | 432.87 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 11.5365 (3), 14.5935 (4), 23.2102 (6) |
V (Å3) | 3907.62 (18) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.40 × 0.28 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 53787, 9742, 6901 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.669 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.166, 1.06 |
No. of reflections | 9742 |
No. of parameters | 549 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.27, −0.28 |
Absolute structure | Flack (1983), 4345 Friedel pairs |
Absolute structure parameter | 0.15 (8) |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP in SHELXTL (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O4 | 0.8600 | 2.1300 | 2.966 (4) | 164.00 |
N3—H3B···O1i | 0.8600 | 2.2600 | 3.059 (3) | 154.00 |
N6—H6A···O6i | 0.8600 | 2.2900 | 3.041 (3) | 146.00 |
N6—H6B···O1 | 0.8600 | 1.9300 | 2.761 (3) | 161.00 |
N9—H9A···O4ii | 0.8600 | 2.5100 | 3.243 (4) | 144.00 |
N9—H9B···O8 | 0.8600 | 1.9800 | 2.799 (3) | 159.00 |
N12—H12A···O6 | 0.8600 | 2.0900 | 2.924 (3) | 163.00 |
N12—H12B···O8ii | 0.8600 | 2.3200 | 3.106 (3) | 153.00 |
C1—H1···O4 | 0.9800 | 2.2200 | 2.794 (4) | 116.00 |
C1—H1···N3 | 0.9800 | 2.4100 | 2.887 (4) | 109.00 |
C12—H12C···O1i | 0.9600 | 2.4500 | 3.164 (4) | 131.00 |
C12—H12D···O2 | 0.9600 | 2.2700 | 2.708 (4) | 107.00 |
C12—H12D···O5iii | 0.9600 | 2.6000 | 3.322 (4) | 133.00 |
C13—H13A···O2 | 0.9600 | 2.3600 | 2.713 (4) | 101.00 |
C18—H18B···O4 | 0.9600 | 2.2400 | 2.673 (6) | 106.00 |
C19—H19B···O3 | 0.9600 | 2.2300 | 2.650 (5) | 105.00 |
C20—H20···O6 | 0.9800 | 2.2300 | 2.807 (4) | 116.00 |
C20—H20···N12 | 0.9800 | 2.4100 | 2.876 (4) | 108.00 |
C31—H31B···O5 | 0.9600 | 2.2700 | 2.715 (5) | 108.00 |
C32—H32A···O5 | 0.9600 | 2.3300 | 2.711 (5) | 103.00 |
C37—H37A···O8ii | 0.9600 | 2.5700 | 3.208 (4) | 124.00 |
C37—H37C···O7 | 0.9600 | 2.2800 | 2.707 (4) | 106.00 |
C38—H38B···O8 | 0.9600 | 2.2700 | 2.699 (4) | 106.00 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+2, y+1/2, −z+1/2; (iii) x−1/2, −y+3/2, −z+1. |
Acknowledgements
AJT thanks the Council of Scientific and Industrial Research (CSIR), New Delhi, India, for financial support. The authors are grateful to Mr Sanchay Jyoti Bora, Pandu College, Guwahati, India for his suggestions.
References
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Heterocyclic compounds, especially six-membered pyrimidine ring and their derivatives have occupied an important place among organic compounds owing to their various biological signifiances (Zheng et al., 2007). They have been explored for the development of various pharmaceutically important compounds because of their medicinal values (Jain et al., 2006). They also form the basic structural fragment of many alkaloids and pharmacologically active compounds. As part of our ongoing programme on bioactive pyrimidine molecules, we have synthesized a new pyrimidine compound starting from an important building block namely 6-Amino- 1,3-dimethylpyrimidine-2,4(1H, 3H)-dione (Blicke & Godt, 1954; Das et al., 2008). The title compound crystallizes with two molecules in the asymmetric unit. The two uracil moieties in the same molecule are connected by a pair of strong N—H···O hydrogen bonds. The packing is stabilized by N—H···.O, C—H···.O and C—H···.N interactions.