organic compounds
trans-4,5-Dihydroxy-1,3-diphenylimidazolidine-2-thione
aCollege of Chemistry and Environmental Science, Henan Normal University, Xinxiang 453007, People's Republic of China, and bCollege of Chemistry, Luoyang Normal University, Xinxiang 453007, People's Republic of China
*Correspondence e-mail: zzf5188@sohu.com
In the title compound, C15H14N2O2S, the five-membered ring adopts an and the two hydroxy groups lie on opposite sides of the ring. The six-membered rings are oriented at a dihedral angle of 22.63 (3)°. In the intermolecular O—H⋯S and O—H⋯O hydrogen bonds link the molecules into a two-dimensional network.
Related literature
For the biological activity of imidazolidine-2-one derivatives, see: Lam et al. (1994); Lenzen & Ahmad (2001); Perronnet & Teche (1973). For related structures, see: Enders et al. (1979); Zhang et al. (2007).
Experimental
Crystal data
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053680903548X/hk2762sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680903548X/hk2762Isup2.hkl
For the preparation of the title compound, 1,3-diphenylthiourea (0.1 mol), glyoxal (40%, 18 g) and ethanol (95%, 30 ml) were added into a three-necked round-bottomed flask equipped with a stirrer. The mixture was then refluxed with stirring for ca 30 min and thereafter the solvent was removed. The residue was washed with cold ethanol, and the resulting solid product was recrystallized from hot ethanol to give the crystals of the title compound. 1H NMR(DMSO, 400 MHz) of (I): δ 7.52–7.28 (m, 10H), δ 7.10 (d, J = 8.0 Hz, 2H), δ 5.19 (d, J = 8.4 Hz, 2H).
Atom H1 (for OH) is located in a difference Fourier map and only its temperature factor is refined. The remaining H atoms were positioned geometrically with O-H = 0.82 Å (for OH) and C-H = 0.93 and 0.98 Å for aromatic and methine H atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,O), where x = 1.5 for OH H and x = 1.2 for all other H atoms.
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C15H14N2O2S | F(000) = 600 |
Mr = 286.34 | Dx = 1.351 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 871 reflections |
a = 20.5119 (4) Å | θ = 2.9–27.9° |
b = 7.1020 (4) Å | µ = 0.23 mm−1 |
c = 9.6659 (3) Å | T = 294 K |
V = 1408.09 (9) Å3 | Block, colorless |
Z = 4 | 0.35 × 0.22 × 0.20 mm |
Bruker SMART CCD area-detector diffractometer | 2521 independent reflections |
Radiation source: fine-focus sealed tube | 2273 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −24→24 |
Tmin = 0.923, Tmax = 0.944 | k = −8→8 |
7542 measured reflections | l = −11→11 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.119 | w = 1/[σ2(Fo2) + (0.0758P)2 + 0.1052P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max = 0.001 |
2521 reflections | Δρmax = 0.26 e Å−3 |
183 parameters | Δρmin = −0.40 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 1123 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.16 (10) |
C15H14N2O2S | V = 1408.09 (9) Å3 |
Mr = 286.34 | Z = 4 |
Orthorhombic, Pca21 | Mo Kα radiation |
a = 20.5119 (4) Å | µ = 0.23 mm−1 |
b = 7.1020 (4) Å | T = 294 K |
c = 9.6659 (3) Å | 0.35 × 0.22 × 0.20 mm |
Bruker SMART CCD area-detector diffractometer | 2521 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2273 reflections with I > 2σ(I) |
Tmin = 0.923, Tmax = 0.944 | Rint = 0.045 |
7542 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.119 | Δρmax = 0.26 e Å−3 |
S = 1.09 | Δρmin = −0.40 e Å−3 |
2521 reflections | Absolute structure: Flack (1983), 1123 Friedel pairs |
183 parameters | Absolute structure parameter: 0.16 (10) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.57085 (3) | 0.08292 (10) | 0.82543 (8) | 0.0490 (2) | |
O1 | 0.50025 (9) | 0.6924 (3) | 0.73031 (18) | 0.0461 (5) | |
H1 | 0.5111 | 0.7982 | 0.7786 | 0.16 (3)* | |
O2 | 0.41663 (9) | 0.4806 (3) | 1.01911 (19) | 0.0496 (5) | |
H2 | 0.4449 | 0.4376 | 1.0700 | 0.074* | |
N1 | 0.55261 (10) | 0.4549 (3) | 0.8636 (2) | 0.0377 (5) | |
N2 | 0.46089 (9) | 0.2969 (3) | 0.8350 (2) | 0.0390 (5) | |
C1 | 0.52752 (11) | 0.2806 (4) | 0.8419 (2) | 0.0377 (5) | |
C2 | 0.50147 (11) | 0.5976 (4) | 0.8604 (2) | 0.0369 (6) | |
H2A | 0.5071 | 0.6878 | 0.9363 | 0.044* | |
C3 | 0.43958 (12) | 0.4818 (4) | 0.8810 (2) | 0.0380 (6) | |
H3 | 0.4053 | 0.5286 | 0.8194 | 0.046* | |
C4 | 0.61952 (11) | 0.4991 (4) | 0.8966 (2) | 0.0365 (5) | |
C5 | 0.64923 (14) | 0.4175 (4) | 1.0118 (3) | 0.0488 (7) | |
H5 | 0.6268 | 0.3293 | 1.0647 | 0.059* | |
C6 | 0.71267 (15) | 0.4689 (5) | 1.0472 (4) | 0.0610 (8) | |
H6 | 0.7327 | 0.4125 | 1.1229 | 0.073* | |
C7 | 0.74579 (15) | 0.6012 (5) | 0.9721 (4) | 0.0626 (9) | |
H7 | 0.7880 | 0.6358 | 0.9966 | 0.075* | |
C8 | 0.71551 (16) | 0.6831 (6) | 0.8587 (3) | 0.0703 (10) | |
H8 | 0.7376 | 0.7737 | 0.8075 | 0.084* | |
C9 | 0.65245 (13) | 0.6318 (4) | 0.8203 (3) | 0.0551 (7) | |
H9 | 0.6328 | 0.6870 | 0.7437 | 0.066* | |
C10 | 0.41476 (10) | 0.1456 (4) | 0.8282 (3) | 0.0381 (5) | |
C11 | 0.40282 (15) | 0.0370 (5) | 0.9455 (3) | 0.0505 (7) | |
H11 | 0.4276 | 0.0542 | 1.0251 | 0.061* | |
C12 | 0.35357 (17) | −0.0971 (4) | 0.9426 (4) | 0.0585 (8) | |
H12 | 0.3456 | −0.1715 | 1.0200 | 0.070* | |
C13 | 0.31627 (13) | −0.1201 (4) | 0.8242 (4) | 0.0612 (8) | |
H13 | 0.2824 | −0.2071 | 0.8237 | 0.073* | |
C14 | 0.32898 (15) | −0.0150 (5) | 0.7067 (3) | 0.0563 (8) | |
H14 | 0.3046 | −0.0337 | 0.6268 | 0.068* | |
C15 | 0.37826 (14) | 0.1181 (4) | 0.7087 (3) | 0.0450 (6) | |
H15 | 0.3870 | 0.1892 | 0.6301 | 0.054* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0455 (3) | 0.0357 (4) | 0.0658 (4) | 0.0026 (3) | 0.0023 (3) | −0.0088 (3) |
O1 | 0.0571 (12) | 0.0356 (12) | 0.0456 (9) | −0.0020 (8) | 0.0007 (7) | 0.0041 (8) |
O2 | 0.0486 (10) | 0.0555 (14) | 0.0447 (9) | 0.0059 (10) | 0.0092 (8) | 0.0014 (9) |
N1 | 0.0353 (10) | 0.0304 (12) | 0.0473 (11) | −0.0039 (9) | −0.0010 (8) | −0.0025 (8) |
N2 | 0.0370 (10) | 0.0310 (12) | 0.0489 (9) | −0.0026 (8) | −0.0008 (9) | −0.0005 (10) |
C1 | 0.0369 (11) | 0.0410 (15) | 0.0353 (10) | −0.0014 (10) | 0.0006 (9) | −0.0012 (11) |
C2 | 0.0401 (13) | 0.0327 (16) | 0.0379 (12) | 0.0032 (10) | −0.0019 (8) | −0.0044 (10) |
C3 | 0.0399 (12) | 0.0335 (16) | 0.0407 (11) | 0.0028 (11) | −0.0016 (10) | −0.0030 (10) |
C4 | 0.0378 (12) | 0.0293 (14) | 0.0423 (11) | −0.0014 (11) | 0.0020 (9) | −0.0078 (10) |
C5 | 0.0449 (14) | 0.0473 (18) | 0.0542 (13) | −0.0027 (12) | −0.0048 (11) | 0.0048 (12) |
C6 | 0.0506 (17) | 0.062 (2) | 0.0708 (19) | 0.0008 (15) | −0.0181 (15) | 0.0007 (16) |
C7 | 0.0369 (14) | 0.072 (2) | 0.0792 (19) | −0.0100 (15) | −0.0032 (13) | −0.0167 (17) |
C8 | 0.0579 (17) | 0.082 (3) | 0.071 (2) | −0.0333 (17) | 0.0108 (15) | 0.0005 (18) |
C9 | 0.0545 (14) | 0.062 (2) | 0.0488 (13) | −0.0183 (14) | 0.0016 (13) | 0.0044 (16) |
C10 | 0.0354 (10) | 0.0335 (14) | 0.0453 (11) | −0.0013 (9) | 0.0018 (10) | −0.0037 (12) |
C11 | 0.0591 (16) | 0.0430 (18) | 0.0494 (13) | −0.0023 (14) | −0.0004 (13) | 0.0042 (13) |
C12 | 0.069 (2) | 0.0369 (18) | 0.0694 (17) | −0.0075 (14) | 0.0181 (15) | 0.0062 (15) |
C13 | 0.0464 (14) | 0.0455 (19) | 0.092 (2) | −0.0086 (12) | 0.0099 (16) | −0.0186 (19) |
C14 | 0.0497 (16) | 0.054 (2) | 0.0654 (18) | −0.0037 (15) | −0.0079 (12) | −0.0150 (15) |
C15 | 0.0498 (15) | 0.0362 (16) | 0.0490 (13) | −0.0011 (12) | −0.0005 (11) | −0.0015 (12) |
S1—C1 | 1.669 (3) | C6—C7 | 1.368 (5) |
O1—C2 | 1.427 (3) | C6—H6 | 0.9300 |
O1—H1 | 0.9123 | C7—C8 | 1.387 (5) |
O2—C3 | 1.416 (3) | C7—H7 | 0.9300 |
O2—H2 | 0.8200 | C8—C9 | 1.394 (4) |
N1—C1 | 1.357 (3) | C8—H8 | 0.9300 |
N1—C4 | 1.444 (3) | C9—H9 | 0.9300 |
N1—C2 | 1.459 (3) | C10—C15 | 1.390 (4) |
N2—C1 | 1.373 (3) | C10—C11 | 1.393 (4) |
N2—C10 | 1.433 (3) | C11—C12 | 1.389 (4) |
N2—C3 | 1.454 (3) | C11—H11 | 0.9300 |
C2—C3 | 1.526 (4) | C12—C13 | 1.386 (6) |
C2—H2A | 0.9800 | C12—H12 | 0.9300 |
C3—H3 | 0.9800 | C13—C14 | 1.384 (6) |
C4—C9 | 1.374 (4) | C13—H13 | 0.9300 |
C4—C5 | 1.396 (4) | C14—C15 | 1.384 (4) |
C5—C6 | 1.394 (4) | C14—H14 | 0.9300 |
C5—H5 | 0.9300 | C15—H15 | 0.9300 |
C2—O1—H1 | 86.1 | C7—C6—H6 | 119.6 |
C3—O2—H2 | 109.5 | C5—C6—H6 | 119.6 |
C1—N1—C4 | 126.4 (2) | C6—C7—C8 | 119.0 (3) |
C1—N1—C2 | 110.97 (19) | C6—C7—H7 | 120.5 |
C4—N1—C2 | 122.5 (2) | C8—C7—H7 | 120.5 |
C1—N2—C10 | 126.6 (2) | C7—C8—C9 | 121.1 (3) |
C1—N2—C3 | 111.1 (2) | C7—C8—H8 | 119.5 |
C10—N2—C3 | 119.53 (19) | C9—C8—H8 | 119.5 |
N1—C1—N2 | 108.0 (2) | C4—C9—C8 | 119.5 (3) |
N1—C1—S1 | 125.46 (17) | C4—C9—H9 | 120.3 |
N2—C1—S1 | 126.6 (2) | C8—C9—H9 | 120.3 |
O1—C2—N1 | 111.04 (18) | C15—C10—C11 | 120.3 (2) |
O1—C2—C3 | 110.76 (19) | C15—C10—N2 | 120.0 (2) |
N1—C2—C3 | 102.8 (2) | C11—C10—N2 | 119.6 (2) |
O1—C2—H2A | 110.7 | C12—C11—C10 | 119.4 (3) |
N1—C2—H2A | 110.7 | C12—C11—H11 | 120.3 |
C3—C2—H2A | 110.7 | C10—C11—H11 | 120.3 |
O2—C3—N2 | 112.5 (2) | C13—C12—C11 | 119.9 (3) |
O2—C3—C2 | 113.8 (2) | C13—C12—H12 | 120.0 |
N2—C3—C2 | 101.37 (19) | C11—C12—H12 | 120.0 |
O2—C3—H3 | 109.6 | C14—C13—C12 | 120.7 (3) |
N2—C3—H3 | 109.6 | C14—C13—H13 | 119.7 |
C2—C3—H3 | 109.6 | C12—C13—H13 | 119.7 |
C9—C4—C5 | 119.9 (2) | C15—C14—C13 | 119.6 (3) |
C9—C4—N1 | 119.9 (2) | C15—C14—H14 | 120.2 |
C5—C4—N1 | 120.1 (2) | C13—C14—H14 | 120.2 |
C6—C5—C4 | 119.6 (3) | C14—C15—C10 | 120.1 (3) |
C6—C5—H5 | 120.2 | C14—C15—H15 | 120.0 |
C4—C5—H5 | 120.2 | C10—C15—H15 | 120.0 |
C7—C6—C5 | 120.9 (3) | ||
C4—N1—C1—N2 | 170.7 (2) | C1—N1—C4—C5 | −56.2 (3) |
C2—N1—C1—N2 | −4.7 (3) | C2—N1—C4—C5 | 118.7 (3) |
C4—N1—C1—S1 | −9.7 (3) | C9—C4—C5—C6 | −1.2 (4) |
C2—N1—C1—S1 | 174.86 (17) | N1—C4—C5—C6 | −176.5 (3) |
C10—N2—C1—N1 | −172.8 (2) | C4—C5—C6—C7 | 1.3 (5) |
C3—N2—C1—N1 | −11.8 (3) | C5—C6—C7—C8 | −0.6 (5) |
C10—N2—C1—S1 | 7.7 (3) | C6—C7—C8—C9 | −0.4 (5) |
C3—N2—C1—S1 | 168.61 (19) | C5—C4—C9—C8 | 0.2 (4) |
C1—N1—C2—O1 | −100.5 (2) | N1—C4—C9—C8 | 175.6 (3) |
C4—N1—C2—O1 | 83.9 (2) | C7—C8—C9—C4 | 0.5 (5) |
C1—N1—C2—C3 | 18.0 (2) | C1—N2—C10—C15 | −112.5 (3) |
C4—N1—C2—C3 | −157.6 (2) | C3—N2—C10—C15 | 87.9 (3) |
C1—N2—C3—O2 | −99.8 (2) | C1—N2—C10—C11 | 72.9 (3) |
C10—N2—C3—O2 | 62.7 (3) | C3—N2—C10—C11 | −86.6 (3) |
C1—N2—C3—C2 | 22.0 (2) | C15—C10—C11—C12 | −0.8 (4) |
C10—N2—C3—C2 | −175.5 (2) | N2—C10—C11—C12 | 173.7 (3) |
O1—C2—C3—O2 | −143.2 (2) | C10—C11—C12—C13 | −0.9 (5) |
N1—C2—C3—O2 | 98.1 (2) | C11—C12—C13—C14 | 2.2 (5) |
O1—C2—C3—N2 | 95.8 (2) | C12—C13—C14—C15 | −1.8 (5) |
N1—C2—C3—N2 | −22.9 (2) | C13—C14—C15—C10 | 0.1 (4) |
C1—N1—C4—C9 | 128.4 (3) | C11—C10—C15—C14 | 1.2 (4) |
C2—N1—C4—C9 | −56.7 (3) | N2—C10—C15—C14 | −173.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S1i | 0.91 | 2.41 | 3.261 (2) | 156 |
O2—H2···O1ii | 0.82 | 2.13 | 2.930 (3) | 167 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H14N2O2S |
Mr | 286.34 |
Crystal system, space group | Orthorhombic, Pca21 |
Temperature (K) | 294 |
a, b, c (Å) | 20.5119 (4), 7.1020 (4), 9.6659 (3) |
V (Å3) | 1408.09 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.35 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.923, 0.944 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7542, 2521, 2273 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.119, 1.09 |
No. of reflections | 2521 |
No. of parameters | 183 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.26, −0.40 |
Absolute structure | Flack (1983), 1123 Friedel pairs |
Absolute structure parameter | 0.16 (10) |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S1i | 0.91 | 2.41 | 3.261 (2) | 155.8 |
O2—H2···O1ii | 0.82 | 2.13 | 2.930 (3) | 166.9 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y+1, z+1/2. |
Acknowledgements
Financial support from Henan Normal University and the Innovation Scientists and Technicians Troop Construction Projects of Henan Province (grant No. 2008IRTSTHN002) is gratefully acknowledged. The authors also thank the Physiochemical Analysis Measurement Laboratory, College of Chemistry, Luoyang Normal University, for performing the X-ray analysis.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Imidazolidine-2-one derivates often exhibit powerful bioactivities, such as good herbicidal activity (Perronnet & Teche,1973), antidiabetic properties (Lenzen & Ahmad, 2001) and anti-HIV activity (Lam et al., 1994). Enders et al. (1979) have earlier reported the synthesis and use of 4,5-dihydroxyimidazolidine-2-thiones. However, to the best of our knowledge, there are few N,N'-diaryl substituted 4,5-dihydroxyimidazolidine-2 -thiones reported so far. As a typical example of such compounds, we report herein the crystal structure of the title compound.
In the molecule of the title compound, (I), (Fig. 1) the five-membered ring A (N1/N2/C1-C3) adopts an envelope conformation with atom C3 displaced by -0.369 (3) Å from the plane of the other ring atoms. The two hydroxyl groups lie on opposite sides of the ring. The C1-N1 [1.357 (3) Å] and C1-N2 [1.373 (3) Å] bonds are longer than the corresponding bonds in trans-4,5-dihydroxyimidazolidine-2-thione, (II), [1.335 (2) and 1.336 (2) Å; Zhang et al., 2007]. Conversely, the C1═S1 [1.669 (3) Å] and C2-C3 [1.526 (4) Å] bonds in (I) are shorter than the corresponding bonds in (II) [1.684 (2) and 1.537 (2) Å, respectively]. Rings B (C4-C9) and C (C10-C15) are, of course, planar and they are oriented at a dihedral angle of B/C = 22.63 (3)°.
In the crystal structure, intermolecular O-H···S A and O-H···O hydrogen bonds (Table 1) link the molecules into a two-dimensional network (Fig. 2), in which they may be effective in the stabilization of the structure.