organic compounds
4-(2-Chloroethyl)morpholinium picrate
aDepartment of Physics, University of Jammu, Jammu Tawi 180 006, India, and bDepartment of Studies in Chemistry, Mangalore University, Magalagangotri 574 199, India
*Correspondence e-mail: rk_paper@rediffmail.com
The title compound, C6H13ClNO+·C6H2N3O7−, was synthesized from picric acid and 4-(2-chloroethyl)morpholine. The is stabilized by C—H⋯O and N—H⋯O hydrogen-bond interactions.
Related literature
For the homeopathic uses of the metal derivatives of picric acid, see: Maurya et al. (1999). For the medical applications of ammonium picrate, see: Boericke (1982) and of morpholine derivatives, see: Lutz et al. (1947); Hazard et al. (1948); Raymond et al. (1999). For a related structure, see: Briggs et al. (2004). For a description of the Cambridge Structural Database, see: Allen (2002).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: CrysAlis Pro (Oxford Diffraction, 2007); cell CrysAlis Pro; data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows(Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809035405/jh2096sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809035405/jh2096Isup2.hkl
Picric acid (2.29 g, 0.01 mol) was dissolved in water. 4-(2-chloroethyl) morpholine (1.49 g 0.01 mol) was dissolved in 25 ml of ethanol. The two solutions were mixed and 5 ml of 5 M HCl was added to this mixture and stirred for few minutes,filtered, dried and yellow crystals of 4-(2-Chloroethyl)morpholinium picrate were obtained by slow evaporation in ethanol. (m.p. 394 K). Analytical data: Found (Cald): C %: 36.89(37.96); H%: 4.22 (4.25); N%:14.67(14.75).
All hydrogen atoms were located from the difference Fourier map and refined isotropically with distance restraints 0.830–0.982 Å.
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows(Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. View of (I) (50% probability displacement ellipsoids). | |
Fig. 2. Depiction of C—H···O and N—H···O interactions in the title compound(I) |
C6H13ClNO+·C6H2N3O7− | Z = 2 |
Mr = 378.72 | F(000) = 392 |
Triclinic, P1 | Dx = 1.611 Mg m−3 |
a = 8.2063 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 9.3075 (5) Å | Cell parameters from 3665 reflections |
c = 10.2896 (6) Å | θ = 3.3–32.3° |
α = 93.954 (5)° | µ = 0.30 mm−1 |
β = 95.284 (5)° | T = 293 K |
γ = 90.376 (4)° | Rectangular, yellow |
V = 780.65 (7) Å3 | 0.30 × 0.24 × 0.18 mm |
Oxford Diffraction Xcalibur diffractometer | Rint = 0.016 |
ω–2θ scans | θmax = 32.3°, θmin = 3.3° |
8478 measured reflections | h = −12→12 |
4960 independent reflections | k = −8→13 |
3665 reflections with I > 2σ(I) | l = −14→15 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | 0 constraints |
R[F2 > 2σ(F2)] = 0.058 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.179 | w = 1/[σ2(Fo2) + (0.0877P)2 + 0.2886P] where P = (Fo2 + 2Fc2)/3 |
S = 1.12 | (Δ/σ)max < 0.001 |
4960 reflections | Δρmax = 0.85 e Å−3 |
286 parameters | Δρmin = −0.61 e Å−3 |
C6H13ClNO+·C6H2N3O7− | γ = 90.376 (4)° |
Mr = 378.72 | V = 780.65 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.2063 (4) Å | Mo Kα radiation |
b = 9.3075 (5) Å | µ = 0.30 mm−1 |
c = 10.2896 (6) Å | T = 293 K |
α = 93.954 (5)° | 0.30 × 0.24 × 0.18 mm |
β = 95.284 (5)° |
Oxford Diffraction Xcalibur diffractometer | 3665 reflections with I > 2σ(I) |
8478 measured reflections | Rint = 0.016 |
4960 independent reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.179 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | Δρmax = 0.85 e Å−3 |
4960 reflections | Δρmin = −0.61 e Å−3 |
286 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
H8B | −0.178 (3) | −0.150 (3) | 0.786 (2) | 0.035 (6)* | |
H9B | −0.286 (3) | 0.146 (3) | 0.883 (3) | 0.041 (6)* | |
H4 | 0.386 (3) | 0.587 (2) | 0.610 (2) | 0.033 (6)* | |
H9A | −0.401 (3) | 0.024 (3) | 0.793 (2) | 0.036 (6)* | |
H10A | −0.331 (3) | 0.311 (3) | 0.731 (2) | 0.039 (6)* | |
H2 | 0.299 (3) | 0.541 (3) | 0.972 (3) | 0.042 (7)* | |
H11A | −0.135 (3) | −0.023 (3) | 0.548 (2) | 0.040 (6)* | |
H12A | −0.241 (3) | 0.215 (3) | 0.532 (3) | 0.049 (7)* | |
H8A | −0.102 (3) | −0.044 (2) | 0.887 (3) | 0.033 (6)* | |
H11B | −0.300 (3) | −0.076 (3) | 0.597 (2) | 0.037 (6)* | |
H7B | 0.087 (4) | −0.208 (3) | 0.791 (3) | 0.058 (8)* | |
H12B | −0.355 (4) | 0.101 (3) | 0.435 (3) | 0.055 (8)* | |
H7A | 0.069 (3) | −0.121 (3) | 0.678 (3) | 0.052 (7)* | |
H10B | −0.504 (4) | 0.259 (3) | 0.757 (3) | 0.052 (7)* | |
H4' | −0.106 (3) | 0.125 (3) | 0.743 (2) | 0.037 (6)* | |
Cl | 0.22010 (6) | 0.00390 (7) | 0.83918 (7) | 0.0572 (2) | |
N4 | −0.18045 (17) | 0.05189 (15) | 0.73274 (15) | 0.0277 (3) | |
C8 | −0.1068 (2) | −0.0703 (2) | 0.8042 (2) | 0.0333 (4) | |
C9 | −0.3282 (2) | 0.1067 (2) | 0.7962 (2) | 0.0343 (4) | |
O8 | −0.4535 (2) | 0.1794 (2) | 0.58892 (18) | 0.0535 (4) | |
C11 | −0.2318 (2) | 0.0085 (2) | 0.5915 (2) | 0.0365 (4) | |
C10 | −0.4054 (3) | 0.2269 (2) | 0.7217 (3) | 0.0469 (5) | |
C7 | 0.0592 (2) | −0.1150 (2) | 0.7678 (2) | 0.0405 (4) | |
C12 | −0.3138 (3) | 0.1338 (3) | 0.5261 (2) | 0.0465 (5) | |
C5 | 0.2198 (2) | 0.43814 (18) | 0.62764 (19) | 0.0308 (3) | |
N2 | 0.47503 (19) | 0.70058 (17) | 0.84556 (19) | 0.0374 (4) | |
C2 | 0.2800 (2) | 0.51646 (19) | 0.8933 (2) | 0.0325 (4) | |
O1 | 0.0317 (2) | 0.25764 (19) | 0.67334 (16) | 0.0543 (5) | |
C4 | 0.3325 (2) | 0.54510 (18) | 0.6696 (2) | 0.0318 (4) | |
C3 | 0.3613 (2) | 0.58362 (18) | 0.80201 (19) | 0.0310 (4) | |
C1 | 0.1667 (2) | 0.40844 (18) | 0.85050 (19) | 0.0311 (4) | |
C6 | 0.1275 (2) | 0.35914 (19) | 0.71437 (19) | 0.0330 (4) | |
N3 | 0.0845 (2) | 0.34768 (17) | 0.95407 (18) | 0.0384 (4) | |
N1 | 0.1924 (2) | 0.40692 (18) | 0.48624 (17) | 0.0389 (4) | |
O5 | 0.5335 (2) | 0.76658 (17) | 0.76105 (19) | 0.0541 (4) | |
O2 | −0.0347 (2) | 0.2682 (2) | 0.92512 (19) | 0.0603 (5) | |
O4 | 0.5057 (2) | 0.73018 (19) | 0.96342 (19) | 0.0542 (4) | |
O3 | 0.1342 (2) | 0.3801 (2) | 1.06775 (18) | 0.0568 (5) | |
O7 | 0.0693 (3) | 0.3444 (3) | 0.4397 (2) | 0.0808 (7) | |
O6 | 0.2896 (3) | 0.4530 (3) | 0.4174 (2) | 0.0902 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl | 0.0304 (2) | 0.0661 (4) | 0.0743 (5) | −0.0029 (2) | 0.0023 (2) | 0.0011 (3) |
N4 | 0.0240 (6) | 0.0286 (6) | 0.0314 (7) | −0.0047 (5) | 0.0033 (5) | 0.0069 (5) |
C8 | 0.0287 (8) | 0.0346 (9) | 0.0378 (10) | −0.0009 (7) | 0.0032 (7) | 0.0116 (7) |
C9 | 0.0269 (8) | 0.0356 (9) | 0.0411 (10) | −0.0010 (6) | 0.0065 (7) | 0.0041 (7) |
O8 | 0.0401 (8) | 0.0624 (10) | 0.0567 (11) | 0.0076 (7) | −0.0100 (7) | 0.0140 (8) |
C11 | 0.0333 (9) | 0.0426 (10) | 0.0330 (9) | −0.0036 (7) | 0.0009 (7) | 0.0027 (7) |
C10 | 0.0431 (11) | 0.0402 (10) | 0.0573 (14) | 0.0088 (9) | 0.0011 (10) | 0.0067 (9) |
C7 | 0.0340 (9) | 0.0425 (10) | 0.0449 (12) | 0.0056 (8) | 0.0033 (8) | 0.0012 (9) |
C12 | 0.0446 (11) | 0.0585 (13) | 0.0362 (11) | −0.0044 (10) | −0.0058 (9) | 0.0152 (9) |
C5 | 0.0287 (7) | 0.0271 (7) | 0.0367 (9) | −0.0030 (6) | 0.0012 (6) | 0.0057 (6) |
N2 | 0.0289 (7) | 0.0288 (7) | 0.0537 (11) | −0.0048 (6) | 0.0011 (7) | 0.0009 (7) |
C2 | 0.0306 (8) | 0.0285 (8) | 0.0382 (10) | −0.0009 (6) | 0.0009 (7) | 0.0042 (7) |
O1 | 0.0577 (10) | 0.0596 (10) | 0.0445 (9) | −0.0371 (8) | −0.0041 (7) | 0.0103 (7) |
C4 | 0.0265 (7) | 0.0258 (7) | 0.0442 (10) | −0.0024 (6) | 0.0056 (7) | 0.0089 (7) |
C3 | 0.0261 (7) | 0.0242 (7) | 0.0425 (10) | −0.0044 (6) | 0.0011 (7) | 0.0036 (7) |
C1 | 0.0293 (8) | 0.0284 (7) | 0.0366 (9) | −0.0038 (6) | 0.0041 (7) | 0.0083 (7) |
C6 | 0.0282 (8) | 0.0305 (8) | 0.0409 (10) | −0.0069 (6) | 0.0002 (7) | 0.0103 (7) |
N3 | 0.0397 (8) | 0.0313 (7) | 0.0467 (10) | −0.0014 (6) | 0.0122 (7) | 0.0101 (7) |
N1 | 0.0435 (9) | 0.0361 (8) | 0.0369 (9) | −0.0018 (7) | 0.0037 (7) | 0.0020 (7) |
O5 | 0.0504 (9) | 0.0417 (8) | 0.0711 (12) | −0.0223 (7) | 0.0093 (8) | 0.0074 (8) |
O2 | 0.0626 (11) | 0.0575 (10) | 0.0627 (11) | −0.0316 (8) | 0.0238 (9) | −0.0016 (8) |
O4 | 0.0494 (9) | 0.0505 (9) | 0.0590 (11) | −0.0126 (7) | −0.0051 (8) | −0.0080 (8) |
O3 | 0.0639 (11) | 0.0647 (11) | 0.0439 (9) | −0.0126 (9) | 0.0067 (8) | 0.0163 (8) |
O7 | 0.0923 (16) | 0.1001 (17) | 0.0461 (11) | −0.0532 (14) | −0.0013 (10) | −0.0075 (10) |
O6 | 0.0833 (15) | 0.142 (2) | 0.0462 (11) | −0.0453 (16) | 0.0161 (10) | 0.0066 (13) |
Cl—C7 | 1.788 (2) | C12—H12A | 0.96 (3) |
N4—C8 | 1.497 (2) | C12—H12B | 0.99 (3) |
N4—C11 | 1.503 (2) | C5—C4 | 1.374 (2) |
N4—C9 | 1.504 (2) | C5—C6 | 1.455 (2) |
N4—H4' | 0.91 (2) | C5—N1 | 1.460 (3) |
C8—C7 | 1.500 (3) | N2—O4 | 1.228 (3) |
C8—H8B | 0.94 (2) | N2—O5 | 1.229 (2) |
C8—H8A | 0.87 (3) | N2—C3 | 1.449 (2) |
C9—C10 | 1.510 (3) | C2—C3 | 1.382 (3) |
C9—H9B | 0.98 (3) | C2—C1 | 1.386 (2) |
C9—H9A | 0.97 (2) | C2—H2 | 0.83 (3) |
O8—C12 | 1.420 (3) | O1—C6 | 1.250 (2) |
O8—C10 | 1.426 (3) | C4—C3 | 1.383 (3) |
C11—C12 | 1.517 (3) | C4—H4 | 0.89 (2) |
C11—H11A | 0.98 (3) | C1—C6 | 1.450 (3) |
C11—H11B | 0.97 (2) | C1—N3 | 1.456 (2) |
C10—H10A | 0.98 (3) | N3—O3 | 1.220 (2) |
C10—H10B | 0.96 (3) | N3—O2 | 1.225 (2) |
C7—H7B | 0.93 (3) | N1—O7 | 1.206 (3) |
C7—H7A | 0.94 (3) | N1—O6 | 1.210 (3) |
C8—N4—C11 | 112.20 (15) | Cl—C7—H7A | 105.7 (17) |
C8—N4—C9 | 110.07 (14) | H7B—C7—H7A | 103 (3) |
C11—N4—C9 | 108.38 (14) | O8—C12—C11 | 111.16 (18) |
C8—N4—H4' | 106.9 (15) | O8—C12—H12A | 106.5 (17) |
C11—N4—H4' | 113.0 (15) | C11—C12—H12A | 110.6 (16) |
C9—N4—H4' | 106.1 (15) | O8—C12—H12B | 106.1 (17) |
N4—C8—C7 | 115.12 (16) | C11—C12—H12B | 108.8 (16) |
N4—C8—H8B | 107.4 (14) | H12A—C12—H12B | 113 (2) |
C7—C8—H8B | 108.0 (14) | C4—C5—C6 | 124.17 (18) |
N4—C8—H8A | 106.8 (16) | C4—C5—N1 | 116.02 (16) |
C7—C8—H8A | 110.2 (15) | C6—C5—N1 | 119.80 (15) |
H8B—C8—H8A | 109 (2) | O4—N2—O5 | 123.60 (17) |
N4—C9—C10 | 110.06 (17) | O4—N2—C3 | 118.95 (17) |
N4—C9—H9B | 105.2 (15) | O5—N2—C3 | 117.44 (18) |
C10—C9—H9B | 108.9 (15) | C3—C2—C1 | 118.96 (18) |
N4—C9—H9A | 105.1 (14) | C3—C2—H2 | 120.0 (18) |
C10—C9—H9A | 111.6 (14) | C1—C2—H2 | 121.0 (18) |
H9B—C9—H9A | 116 (2) | C5—C4—C3 | 119.30 (16) |
C12—O8—C10 | 109.70 (17) | C5—C4—H4 | 118.7 (15) |
N4—C11—C12 | 109.86 (17) | C3—C4—H4 | 122.0 (15) |
N4—C11—H11A | 109.0 (14) | C2—C3—C4 | 121.53 (16) |
C12—C11—H11A | 111.4 (14) | C2—C3—N2 | 119.26 (17) |
N4—C11—H11B | 102.7 (14) | C4—C3—N2 | 119.18 (16) |
C12—C11—H11B | 116.2 (14) | C2—C1—C6 | 124.15 (16) |
H11A—C11—H11B | 107 (2) | C2—C1—N3 | 114.57 (17) |
O8—C10—C9 | 111.16 (18) | C6—C1—N3 | 121.27 (15) |
O8—C10—H10A | 113.2 (15) | O1—C6—C1 | 125.59 (17) |
C9—C10—H10A | 109.7 (14) | O1—C6—C5 | 122.46 (18) |
O8—C10—H10B | 105.5 (17) | C1—C6—C5 | 111.90 (15) |
C9—C10—H10B | 111.4 (17) | O3—N3—O2 | 121.69 (18) |
H10A—C10—H10B | 106 (2) | O3—N3—C1 | 118.95 (17) |
C8—C7—Cl | 113.24 (15) | O2—N3—C1 | 119.35 (18) |
C8—C7—H7B | 113.2 (19) | O7—N1—O6 | 121.2 (2) |
Cl—C7—H7B | 107.2 (18) | O7—N1—C5 | 119.83 (18) |
C8—C7—H7A | 114.0 (18) | O6—N1—C5 | 118.78 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4′···O1 | 0.91 (3) | 1.89 (3) | 2.718 (2) | 151.2 (19) |
N4—H4′···O2 | 0.91 (3) | 2.25 (2) | 2.896 (2) | 127.6 (17) |
C2—H2···O3 | 0.83 (3) | 2.34 (3) | 2.637 (3) | 102 (2) |
C2—H2···O4 | 0.83 (2) | 2.45 (2) | 2.723 (3) | 101 (2) |
C4—H4···O6 | 0.90 (3) | 2.34 (3) | 2.667 (3) | 101.7 (15) |
C7—H7A···O7i | 0.93 (3) | 2.54 (3) | 3.026 (3) | 113 (2) |
C8—H8B···O5ii | 0.94 (3) | 2.47 (2) | 3.290 (2) | 146 (2) |
C9—H9A···O5ii | 0.97 (3) | 2.45 (3) | 3.341 (2) | 154 (2) |
C9—H9B···O2 | 0.97 (3) | 2.34 (3) | 2.985 (3) | 123 (2) |
C12—H12A···O1 | 0.96 (3) | 2.57 (2) | 3.254 (3) | 129 (2) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C6H13ClNO+·C6H2N3O7− |
Mr | 378.72 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 8.2063 (4), 9.3075 (5), 10.2896 (6) |
α, β, γ (°) | 93.954 (5), 95.284 (5), 90.376 (4) |
V (Å3) | 780.65 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.30 × 0.24 × 0.18 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8478, 4960, 3665 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.752 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.179, 1.12 |
No. of reflections | 4960 |
No. of parameters | 286 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.85, −0.61 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXS86 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows(Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4'···O1 | 0.91 (3) | 1.89 (3) | 2.718 (2) | 151.2 (19) |
N4—H4'···O2 | 0.91 (3) | 2.25 (2) | 2.896 (2) | 127.6 (17) |
C2—H2···O3 | 0.83 (3) | 2.34 (3) | 2.637 (3) | 102 (2) |
C2—H2···O4 | 0.83 (2) | 2.45 (2) | 2.723 (3) | 101 (2) |
C4—H4···O6 | 0.90 (3) | 2.34 (3) | 2.667 (3) | 101.7 (15) |
C7—H7A···O7i | 0.93 (3) | 2.54 (3) | 3.026 (3) | 113 (2) |
C8—H8B···O5ii | 0.94 (3) | 2.47 (2) | 3.290 (2) | 146 (2) |
C9—H9A···O5ii | 0.97 (3) | 2.45 (3) | 3.341 (2) | 154 (2) |
C9—H9B···O2 | 0.97 (3) | 2.34 (3) | 2.985 (3) | 123 (2) |
C12—H12A···O1 | 0.96 (3) | 2.57 (2) | 3.254 (3) | 129 (2) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−1, y−1, z. |
Acknowledgements
The authors are grateful to the Department of Science and Technology of the Government of India for funding under SR/S2/CMP-47/2003 research project.
References
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The metal derivatives of picric acid are also known as medicines in homeopathy (Maurya et al., 1999). Silver picrate is a good antimicrobial agent. Zinc picrate is used in Bright's disease, headache, exhaustion, facial paralysis, nymphomania, paralysis, seminal emissions, spiral weakness, loss of memory and energy.
Ammonium picrate is a remedy for malarial fever and neuralgia, whooping cough, pain in the occiput and mastoid regions (Boericke, 1982).
N-substituted morpholines were used as anti-malarials (Lutz et al., 1947) and 4-methyl-4-(2-phenylethyl)-morpholinium iodide have shown marked hypertension in dogs at a dose of 5 mg./kg (Hazard et al., 1948). Morpholine derivatives are also used as agricultural fungicides in cereals and are known as ergosterol biosynthesis inhibitors (Raymond et al., 1999).
A search of the Cambridge Structural Database (Version 5.26; Allen, 2002) reveals that there are 90 known structures that contain the morpholinium cation. Of these there are 24 that have an N-ethyl chain, or longer, including the structure of 4-(2-fluoroethyl) morpholinium chloride (Briggs et al., 2004).
The title compound, [C6 H13Cl N O]+ [C6 H2N3 O7]-, was synthesized from picric acid and 4-(2-chloroethyl)morpholine.All geometrical parameters are in their usual ranges. The crystal structure is stabilized by C—H···O and N—H···O hydrogen interactions.