metal-organic compounds
(2-Amino-4,6-dimethylpyrimidine-κN1)(2-amino-4-methylpyrimidine-κN1)silver(I) nitrate
aDepartment of Chemistry, Mudanjiang Teachers College, Mudanjiang 157012, People's Republic of China
*Correspondence e-mail: youngflower7799@yahoo.com.cn
Colourless crystals of the title compound, [Ag(C5H7N3)(C6H9N3)]NO3, separated out of a solution of 2-amino-4-methylpyrimidine, 2-amino-4,6-dimethylpyrimidine and silver nitrate in water and methanol. The central AgI ion is coordinated by two different N atoms in the aromatic rings of the ligands, with an N—Ag—N angle of 173.9 (2)°. The is composed of two complexed cations and stabilized by an intermolecular N—H⋯O and N—H⋯N hydrogen-bond network and there is π–π stacking of the aromatic rings [interplanar distance 3.651 (10) Å].
Related literature
For N—Ag—N coordination geometries, see: Greenwood & Earnshaw (1997). For π–π stacking, see: Munakata et al. (2000). For silver coordination networks, see: Seward et al. (2004); Shimizu et al. (1999).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809035181/jh2100sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809035181/jh2100Isup2.hkl
A solution of 108 mg (1 mmol) 2-amino-4-methylpyrimidine and 123 mg (1 mmol) of 2-amino-4,6-dimethylpyrimidine in water-CH3OH (1:1 V/V,10 ml) was added to an aqueous solution of AgNO3 170 mg (1 mmol) in 3 ml water with stirring at 333 K. A small amount of white precipitate was removed from the resulting solution. Prism shaped colorless crystals were obtained by slow evaporation of the solvent at room temperature over a period of 3 days.
All H atoms were placed in calculated positions and refined as riding, with C–H = 0.96–0.98 Å, and N–H = 0.88 Å, and Uiso(H) = 1.2 or 1.5Ueq(C,N).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure with atom labels and 30% probability displacement ellipsoids for non-H atoms. | |
Fig. 2. The packing diagram of molecules, viewed down the b axis, with the weak interactions shown as dashed lines. |
[Ag(C5H7N3)(C6H9N3)]NO3 | F(000) = 1616 |
Mr = 402.18 | Dx = 1.826 Mg m−3 |
Orthorhombic, Pbc21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2b | Cell parameters from 3244 reflections |
a = 7.5689 (4) Å | θ = 2.9–27.0° |
b = 19.1582 (7) Å | µ = 1.40 mm−1 |
c = 20.1826 (10) Å | T = 120 K |
V = 2926.6 (2) Å3 | Prism, colourless |
Z = 8 | 0.50 × 0.40 × 0.35 mm |
Bruker APEXII CCD area-detector diffractometer | 3244 independent reflections |
Radiation source: fine-focus sealed tube | 2647 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ϕ and ω scans | θmax = 27.0°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −8→9 |
Tmin = 0.512, Tmax = 0.616 | k = −24→23 |
11376 measured reflections | l = −17→25 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.129 | w = 1/[σ2(Fo2) + (0.0822P)2 + 2.1516P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max = 0.010 |
3244 reflections | Δρmax = 0.95 e Å−3 |
403 parameters | Δρmin = −0.63 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 0 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.07 (6) |
[Ag(C5H7N3)(C6H9N3)]NO3 | V = 2926.6 (2) Å3 |
Mr = 402.18 | Z = 8 |
Orthorhombic, Pbc21 | Mo Kα radiation |
a = 7.5689 (4) Å | µ = 1.40 mm−1 |
b = 19.1582 (7) Å | T = 120 K |
c = 20.1826 (10) Å | 0.50 × 0.40 × 0.35 mm |
Bruker APEXII CCD area-detector diffractometer | 3244 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2647 reflections with I > 2σ(I) |
Tmin = 0.512, Tmax = 0.616 | Rint = 0.027 |
11376 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.129 | Δρmax = 0.95 e Å−3 |
S = 1.10 | Δρmin = −0.63 e Å−3 |
3244 reflections | Absolute structure: Flack (1983), 0 Friedel pairs |
403 parameters | Absolute structure parameter: 0.07 (6) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ag1 | 0.71751 (9) | 0.60684 (3) | 0.47181 (3) | 0.0436 (2) | |
Ag2 | 0.21246 (9) | 0.64903 (3) | 0.49169 (4) | 0.0463 (2) | |
C1 | 0.7635 (13) | 0.5144 (5) | 0.3524 (6) | 0.045 (2) | |
H1A | 0.8144 | 0.5561 | 0.3356 | 0.054* | |
C2 | 0.7561 (14) | 0.4570 (5) | 0.3120 (6) | 0.046 (2) | |
H2A | 0.7993 | 0.4585 | 0.2678 | 0.055* | |
C3 | 0.6815 (11) | 0.3954 (5) | 0.3386 (5) | 0.040 (2) | |
C4 | 0.6715 (17) | 0.3304 (6) | 0.2971 (6) | 0.058 (3) | |
H4A | 0.6587 | 0.2896 | 0.3261 | 0.087* | |
H4B | 0.7798 | 0.3258 | 0.2709 | 0.087* | |
H4C | 0.5694 | 0.3333 | 0.2674 | 0.087* | |
C5 | 0.6273 (11) | 0.4538 (4) | 0.4376 (5) | 0.0337 (19) | |
C6 | 0.6599 (11) | 0.8125 (4) | 0.6122 (5) | 0.0352 (17) | |
C7 | 0.6426 (15) | 0.8776 (5) | 0.6539 (6) | 0.053 (2) | |
H7A | 0.5347 | 0.9026 | 0.6415 | 0.080* | |
H7B | 0.7453 | 0.9078 | 0.6466 | 0.080* | |
H7C | 0.6366 | 0.8646 | 0.7008 | 0.080* | |
C8 | 0.7394 (12) | 0.7544 (5) | 0.6393 (5) | 0.0381 (19) | |
H8A | 0.7776 | 0.7534 | 0.6841 | 0.046* | |
C9 | 0.7610 (12) | 0.6963 (5) | 0.5967 (5) | 0.0373 (19) | |
C10 | 0.8413 (15) | 0.6312 (6) | 0.6203 (7) | 0.058 (3) | |
H10A | 0.9142 | 0.6110 | 0.5850 | 0.087* | |
H10B | 0.7481 | 0.5981 | 0.6325 | 0.087* | |
H10C | 0.9153 | 0.6409 | 0.6590 | 0.087* | |
C11 | 0.6221 (11) | 0.7588 (4) | 0.5118 (4) | 0.0349 (18) | |
C12 | 0.2777 (12) | 0.5562 (5) | 0.3701 (5) | 0.0367 (19) | |
C13 | 0.3473 (17) | 0.6232 (6) | 0.3442 (7) | 0.061 (3) | |
H13A | 0.4342 | 0.6422 | 0.3754 | 0.091* | |
H13B | 0.2500 | 0.6565 | 0.3390 | 0.091* | |
H13C | 0.4039 | 0.6153 | 0.3012 | 0.091* | |
C14 | 0.2742 (12) | 0.4978 (6) | 0.3302 (5) | 0.041 (2) | |
H14A | 0.3211 | 0.4978 | 0.2866 | 0.050* | |
C15 | 0.1979 (10) | 0.4393 (5) | 0.3581 (5) | 0.0377 (19) | |
C16 | 0.1861 (17) | 0.3734 (6) | 0.3177 (6) | 0.060 (3) | |
H16A | 0.2005 | 0.3328 | 0.3469 | 0.090* | |
H16B | 0.2797 | 0.3733 | 0.2841 | 0.090* | |
H16C | 0.0706 | 0.3711 | 0.2959 | 0.090* | |
C17 | 0.1461 (11) | 0.4950 (4) | 0.4551 (4) | 0.0317 (17) | |
C18 | 0.1404 (11) | 0.8570 (4) | 0.6286 (4) | 0.0330 (16) | |
C19 | 0.1264 (14) | 0.9230 (5) | 0.6686 (6) | 0.055 (3) | |
H19A | 0.0081 | 0.9430 | 0.6631 | 0.082* | |
H19B | 0.2150 | 0.9566 | 0.6531 | 0.082* | |
H19C | 0.1468 | 0.9125 | 0.7154 | 0.082* | |
C20 | 0.2179 (12) | 0.7976 (5) | 0.6557 (5) | 0.042 (2) | |
H20A | 0.2582 | 0.7960 | 0.7002 | 0.050* | |
C21 | 0.2322 (12) | 0.7409 (5) | 0.6130 (6) | 0.039 (2) | |
H21A | 0.2862 | 0.6996 | 0.6294 | 0.046* | |
C22 | 0.0990 (11) | 0.8014 (5) | 0.5295 (4) | 0.0325 (18) | |
N1 | 0.7026 (8) | 0.5141 (4) | 0.4139 (4) | 0.0329 (15) | |
N2 | 0.5607 (11) | 0.4498 (4) | 0.4978 (4) | 0.0439 (18) | |
H2B | 0.5637 | 0.4865 | 0.5241 | 0.053* | |
H2C | 0.5133 | 0.4105 | 0.5117 | 0.053* | |
N3 | 0.6194 (9) | 0.3939 (3) | 0.3996 (4) | 0.0372 (16) | |
N4 | 0.7038 (9) | 0.6994 (3) | 0.5340 (4) | 0.0303 (15) | |
N5 | 0.5602 (11) | 0.7605 (4) | 0.4515 (4) | 0.0441 (19) | |
H5A | 0.5064 | 0.7982 | 0.4369 | 0.053* | |
H5B | 0.5722 | 0.7240 | 0.4255 | 0.053* | |
N6 | 0.6023 (9) | 0.8151 (3) | 0.5505 (4) | 0.0353 (15) | |
N7 | 0.2130 (9) | 0.5570 (4) | 0.4326 (4) | 0.0378 (18) | |
N8 | 0.0846 (11) | 0.4947 (4) | 0.5176 (4) | 0.0446 (19) | |
H8B | 0.0888 | 0.5331 | 0.5416 | 0.054* | |
H8C | 0.0402 | 0.4562 | 0.5345 | 0.054* | |
N9 | 0.1322 (10) | 0.4362 (3) | 0.4176 (4) | 0.0351 (15) | |
N10 | 0.1754 (9) | 0.7407 (3) | 0.5510 (4) | 0.0351 (16) | |
N11 | 0.0341 (10) | 0.8033 (3) | 0.4697 (4) | 0.0407 (16) | |
H11A | −0.0189 | 0.8413 | 0.4553 | 0.049* | |
H11B | 0.0434 | 0.7666 | 0.4437 | 0.049* | |
N12 | 0.0822 (9) | 0.8582 (3) | 0.5674 (4) | 0.0349 (15) | |
N13 | 0.1299 (12) | 0.1949 (4) | 0.3307 (4) | 0.0475 (19) | |
N14 | 0.3858 (11) | 0.5590 (4) | 0.6325 (4) | 0.0424 (17) | |
O1 | 0.2935 (10) | 0.1966 (5) | 0.3249 (6) | 0.076 (3) | |
O2 | 0.0732 (12) | 0.1825 (4) | 0.3870 (4) | 0.067 (2) | |
O3 | 0.0361 (15) | 0.2039 (8) | 0.2829 (6) | 0.114 (4) | |
O4 | 0.2254 (10) | 0.5607 (5) | 0.6432 (4) | 0.059 (2) | |
O5 | 0.4378 (11) | 0.5740 (4) | 0.5762 (4) | 0.0595 (19) | |
O6 | 0.4910 (11) | 0.5443 (5) | 0.6767 (6) | 0.076 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ag1 | 0.0552 (4) | 0.0293 (3) | 0.0463 (4) | 0.0003 (2) | 0.0008 (5) | −0.0078 (3) |
Ag2 | 0.0636 (4) | 0.0301 (3) | 0.0451 (4) | 0.0007 (3) | 0.0003 (5) | −0.0077 (3) |
C1 | 0.053 (5) | 0.033 (5) | 0.048 (6) | 0.001 (4) | 0.014 (5) | 0.006 (5) |
C2 | 0.059 (6) | 0.039 (5) | 0.041 (6) | 0.005 (4) | 0.006 (4) | −0.003 (4) |
C3 | 0.036 (4) | 0.038 (4) | 0.047 (5) | 0.006 (3) | 0.000 (4) | −0.004 (4) |
C4 | 0.073 (7) | 0.046 (5) | 0.055 (7) | −0.001 (5) | 0.004 (5) | −0.018 (5) |
C5 | 0.032 (4) | 0.028 (4) | 0.041 (5) | 0.007 (3) | −0.006 (4) | −0.014 (4) |
C6 | 0.037 (4) | 0.038 (4) | 0.030 (4) | −0.002 (4) | 0.004 (3) | −0.009 (3) |
C7 | 0.056 (5) | 0.051 (5) | 0.053 (6) | −0.001 (5) | −0.008 (5) | −0.022 (5) |
C8 | 0.044 (4) | 0.032 (4) | 0.038 (5) | 0.003 (4) | −0.002 (4) | −0.002 (4) |
C9 | 0.040 (4) | 0.036 (5) | 0.036 (5) | −0.005 (4) | 0.011 (4) | 0.001 (4) |
C10 | 0.058 (6) | 0.064 (6) | 0.053 (7) | −0.001 (5) | 0.003 (5) | −0.007 (6) |
C11 | 0.047 (5) | 0.028 (4) | 0.029 (4) | −0.011 (3) | 0.010 (4) | −0.006 (3) |
C12 | 0.047 (5) | 0.038 (5) | 0.025 (4) | 0.000 (4) | 0.001 (4) | 0.003 (4) |
C13 | 0.070 (7) | 0.054 (6) | 0.058 (8) | −0.011 (6) | −0.001 (6) | 0.018 (6) |
C14 | 0.041 (4) | 0.055 (6) | 0.028 (5) | 0.012 (4) | −0.013 (4) | −0.005 (4) |
C15 | 0.037 (4) | 0.038 (4) | 0.038 (5) | 0.007 (3) | −0.003 (4) | −0.008 (4) |
C16 | 0.082 (8) | 0.047 (5) | 0.052 (7) | 0.003 (5) | −0.004 (6) | −0.014 (5) |
C17 | 0.037 (4) | 0.033 (4) | 0.025 (4) | −0.002 (3) | −0.010 (3) | 0.001 (3) |
C18 | 0.041 (4) | 0.026 (4) | 0.032 (4) | −0.004 (3) | 0.002 (3) | −0.008 (3) |
C19 | 0.060 (6) | 0.043 (5) | 0.060 (7) | 0.002 (4) | −0.017 (5) | −0.015 (5) |
C20 | 0.056 (5) | 0.041 (5) | 0.029 (4) | −0.011 (4) | −0.003 (4) | −0.004 (4) |
C21 | 0.048 (5) | 0.035 (4) | 0.033 (5) | −0.001 (4) | 0.003 (4) | 0.002 (4) |
C22 | 0.033 (4) | 0.033 (4) | 0.031 (5) | −0.011 (3) | 0.010 (3) | 0.002 (3) |
N1 | 0.030 (3) | 0.026 (3) | 0.043 (4) | 0.007 (2) | −0.001 (3) | 0.002 (3) |
N2 | 0.056 (4) | 0.036 (3) | 0.040 (4) | −0.004 (3) | 0.004 (4) | −0.013 (4) |
N3 | 0.042 (4) | 0.027 (3) | 0.042 (4) | 0.002 (3) | −0.002 (3) | −0.012 (3) |
N4 | 0.041 (4) | 0.018 (3) | 0.031 (4) | −0.002 (2) | 0.005 (3) | −0.005 (3) |
N5 | 0.065 (5) | 0.037 (4) | 0.031 (4) | 0.008 (4) | 0.000 (4) | −0.006 (3) |
N6 | 0.039 (3) | 0.027 (3) | 0.040 (4) | 0.004 (3) | 0.001 (3) | −0.006 (3) |
N7 | 0.034 (3) | 0.040 (4) | 0.040 (5) | 0.004 (3) | −0.006 (3) | 0.015 (3) |
N8 | 0.062 (5) | 0.035 (4) | 0.036 (4) | −0.008 (3) | 0.008 (4) | −0.007 (3) |
N9 | 0.051 (4) | 0.027 (3) | 0.027 (4) | 0.008 (3) | −0.008 (3) | −0.003 (3) |
N10 | 0.042 (4) | 0.021 (3) | 0.043 (4) | −0.001 (3) | 0.001 (3) | 0.001 (3) |
N11 | 0.056 (4) | 0.030 (3) | 0.036 (4) | 0.008 (3) | −0.004 (4) | −0.001 (3) |
N12 | 0.031 (3) | 0.031 (3) | 0.043 (4) | −0.002 (3) | −0.002 (3) | −0.001 (3) |
N13 | 0.064 (5) | 0.046 (4) | 0.033 (4) | −0.001 (4) | −0.008 (4) | −0.004 (3) |
N14 | 0.057 (5) | 0.042 (4) | 0.028 (4) | 0.002 (3) | −0.001 (3) | −0.006 (3) |
O1 | 0.056 (5) | 0.078 (6) | 0.092 (8) | 0.006 (4) | −0.004 (5) | −0.023 (6) |
O2 | 0.081 (5) | 0.061 (5) | 0.058 (5) | 0.012 (4) | −0.002 (4) | −0.007 (4) |
O3 | 0.089 (6) | 0.190 (12) | 0.061 (7) | −0.021 (8) | −0.027 (6) | 0.035 (8) |
O4 | 0.057 (4) | 0.082 (6) | 0.037 (4) | 0.009 (4) | −0.005 (3) | −0.014 (4) |
O5 | 0.080 (5) | 0.056 (4) | 0.042 (4) | −0.003 (4) | 0.014 (4) | −0.002 (3) |
O6 | 0.064 (5) | 0.088 (6) | 0.074 (7) | 0.010 (4) | −0.007 (5) | 0.018 (5) |
Ag1—N1 | 2.130 (8) | C13—H13C | 0.9800 |
Ag1—N4 | 2.176 (6) | C14—C15 | 1.380 (15) |
Ag2—N10 | 2.145 (7) | C14—H14A | 0.9500 |
Ag2—N7 | 2.129 (9) | C15—N9 | 1.302 (12) |
C1—N1 | 1.324 (14) | C15—C16 | 1.506 (14) |
C1—C2 | 1.371 (16) | C16—H16A | 0.9800 |
C1—H1A | 0.9500 | C16—H16B | 0.9800 |
C2—C3 | 1.415 (14) | C16—H16C | 0.9800 |
C2—H2A | 0.9500 | C17—N8 | 1.345 (11) |
C3—N3 | 1.316 (13) | C17—N7 | 1.368 (11) |
C3—C4 | 1.503 (14) | C17—N9 | 1.361 (11) |
C4—H4A | 0.9800 | C18—N12 | 1.313 (11) |
C4—H4B | 0.9800 | C18—C20 | 1.391 (13) |
C4—H4C | 0.9800 | C18—C19 | 1.503 (12) |
C5—N2 | 1.317 (13) | C19—H19A | 0.9800 |
C5—N1 | 1.374 (12) | C19—H19B | 0.9800 |
C5—N3 | 1.382 (11) | C19—H19C | 0.9800 |
C6—N6 | 1.320 (12) | C20—C21 | 1.391 (14) |
C6—C8 | 1.378 (13) | C20—H20A | 0.9500 |
C6—C7 | 1.511 (13) | C21—N10 | 1.322 (14) |
C7—H7A | 0.9800 | C21—H21A | 0.9500 |
C7—H7B | 0.9800 | C22—N11 | 1.304 (12) |
C7—H7C | 0.9800 | C22—N12 | 1.336 (11) |
C8—C9 | 1.416 (14) | C22—N10 | 1.369 (11) |
C8—H8A | 0.9500 | N2—H2B | 0.8800 |
C9—N4 | 1.338 (14) | N2—H2C | 0.8800 |
C9—C10 | 1.467 (15) | N5—H5A | 0.8800 |
C10—H10A | 0.9800 | N5—H5B | 0.8800 |
C10—H10B | 0.9800 | N8—H8B | 0.8800 |
C10—H10C | 0.9800 | N8—H8C | 0.8800 |
C11—N5 | 1.304 (11) | N11—H11A | 0.8800 |
C11—N6 | 1.340 (11) | N11—H11B | 0.8800 |
C11—N4 | 1.370 (11) | N13—O3 | 1.210 (13) |
C12—N7 | 1.353 (13) | N13—O1 | 1.244 (12) |
C12—C14 | 1.379 (14) | N13—O2 | 1.238 (12) |
C12—C13 | 1.482 (13) | N14—O5 | 1.237 (11) |
C13—H13A | 0.9800 | N14—O4 | 1.233 (11) |
C13—H13B | 0.9800 | N14—O6 | 1.229 (12) |
N1—Ag1—N4 | 173.9 (2) | C15—C16—H16B | 109.5 |
N10—Ag2—N7 | 172.6 (3) | H16A—C16—H16B | 109.5 |
N1—C1—C2 | 122.7 (10) | C15—C16—H16C | 109.5 |
N1—C1—H1A | 118.6 | H16A—C16—H16C | 109.5 |
C2—C1—H1A | 118.6 | H16B—C16—H16C | 109.5 |
C1—C2—C3 | 117.3 (10) | N8—C17—N7 | 116.4 (8) |
C1—C2—H2A | 121.4 | N8—C17—N9 | 119.4 (8) |
C3—C2—H2A | 121.4 | N7—C17—N9 | 124.2 (8) |
N3—C3—C2 | 121.1 (9) | N12—C18—C20 | 121.7 (8) |
N3—C3—C4 | 119.0 (9) | N12—C18—C19 | 117.8 (8) |
C2—C3—C4 | 119.9 (10) | C20—C18—C19 | 120.5 (8) |
C3—C4—H4A | 109.5 | C18—C19—H19A | 109.5 |
C3—C4—H4B | 109.5 | C18—C19—H19B | 109.5 |
H4A—C4—H4B | 109.5 | H19A—C19—H19B | 109.5 |
C3—C4—H4C | 109.5 | C18—C19—H19C | 109.5 |
H4A—C4—H4C | 109.5 | H19A—C19—H19C | 109.5 |
H4B—C4—H4C | 109.5 | H19B—C19—H19C | 109.5 |
N2—C5—N1 | 121.9 (8) | C21—C20—C18 | 115.4 (9) |
N2—C5—N3 | 116.6 (8) | C21—C20—H20A | 122.3 |
N1—C5—N3 | 121.5 (8) | C18—C20—H20A | 122.3 |
N6—C6—C8 | 123.3 (9) | C20—C21—N10 | 124.2 (9) |
N6—C6—C7 | 117.8 (8) | C20—C21—H21A | 117.9 |
C8—C6—C7 | 118.9 (9) | N10—C21—H21A | 117.9 |
C6—C7—H7A | 109.5 | N11—C22—N12 | 118.1 (8) |
C6—C7—H7B | 109.5 | N11—C22—N10 | 118.5 (8) |
H7A—C7—H7B | 109.5 | N12—C22—N10 | 123.4 (8) |
C6—C7—H7C | 109.5 | C1—N1—C5 | 118.3 (8) |
H7A—C7—H7C | 109.5 | C1—N1—Ag1 | 119.5 (7) |
H7B—C7—H7C | 109.5 | C5—N1—Ag1 | 122.2 (6) |
C6—C8—C9 | 116.4 (9) | C5—N2—H2B | 120.0 |
C6—C8—H8A | 121.8 | C5—N2—H2C | 120.0 |
C9—C8—H8A | 121.8 | H2B—N2—H2C | 120.0 |
N4—C9—C8 | 120.0 (9) | C3—N3—C5 | 119.0 (8) |
N4—C9—C10 | 118.6 (9) | C9—N4—C11 | 119.6 (7) |
C8—C9—C10 | 121.3 (10) | C9—N4—Ag1 | 119.5 (6) |
C9—C10—H10A | 109.5 | C11—N4—Ag1 | 120.6 (6) |
C9—C10—H10B | 109.5 | C11—N5—H5A | 120.0 |
H10A—C10—H10B | 109.5 | C11—N5—H5B | 120.0 |
C9—C10—H10C | 109.5 | H5A—N5—H5B | 120.0 |
H10A—C10—H10C | 109.5 | C6—N6—C11 | 118.9 (8) |
H10B—C10—H10C | 109.5 | C12—N7—C17 | 115.8 (8) |
N5—C11—N6 | 118.9 (9) | C12—N7—Ag2 | 122.1 (6) |
N5—C11—N4 | 119.3 (8) | C17—N7—Ag2 | 122.1 (6) |
N6—C11—N4 | 121.8 (8) | C17—N8—H8B | 120.0 |
N7—C12—C14 | 123.0 (9) | C17—N8—H8C | 120.0 |
N7—C12—C13 | 116.6 (9) | H8B—N8—H8C | 120.0 |
C14—C12—C13 | 120.3 (10) | C15—N9—C17 | 116.5 (8) |
C12—C13—H13A | 109.5 | C21—N10—C22 | 115.8 (8) |
C12—C13—H13B | 109.5 | C21—N10—Ag2 | 119.2 (6) |
H13A—C13—H13B | 109.5 | C22—N10—Ag2 | 125.0 (6) |
C12—C13—H13C | 109.5 | C22—N11—H11A | 120.0 |
H13A—C13—H13C | 109.5 | C22—N11—H11B | 120.0 |
H13B—C13—H13C | 109.5 | H11A—N11—H11B | 120.0 |
C15—C14—C12 | 115.5 (9) | C22—N12—C18 | 119.5 (7) |
C15—C14—H14A | 122.3 | O3—N13—O1 | 120.4 (11) |
C12—C14—H14A | 122.3 | O3—N13—O2 | 123.8 (10) |
N9—C15—C14 | 124.9 (9) | O1—N13—O2 | 115.8 (10) |
N9—C15—C16 | 116.0 (9) | O5—N14—O4 | 117.9 (8) |
C14—C15—C16 | 119.1 (9) | O5—N14—O6 | 120.9 (9) |
C15—C16—H16A | 109.5 | O4—N14—O6 | 121.1 (9) |
N1—C1—C2—C3 | −0.8 (16) | N6—C11—N4—Ag1 | 175.8 (6) |
C1—C2—C3—N3 | 1.0 (15) | N1—Ag1—N4—C9 | 95 (3) |
C1—C2—C3—C4 | −179.2 (10) | N1—Ag1—N4—C11 | −79 (3) |
N6—C6—C8—C9 | 1.4 (13) | C8—C6—N6—C11 | −0.4 (13) |
C7—C6—C8—C9 | −176.5 (8) | C7—C6—N6—C11 | 177.6 (8) |
C6—C8—C9—N4 | −0.7 (13) | N5—C11—N6—C6 | 177.8 (8) |
C6—C8—C9—C10 | −179.0 (9) | N4—C11—N6—C6 | −1.4 (12) |
N7—C12—C14—C15 | 0.6 (13) | C14—C12—N7—C17 | 1.5 (12) |
C13—C12—C14—C15 | −176.6 (9) | C13—C12—N7—C17 | 178.8 (9) |
C12—C14—C15—N9 | −0.2 (13) | C14—C12—N7—Ag2 | −177.9 (7) |
C12—C14—C15—C16 | 179.2 (8) | C13—C12—N7—Ag2 | −0.6 (11) |
N12—C18—C20—C21 | 1.3 (13) | N8—C17—N7—C12 | 178.7 (8) |
C19—C18—C20—C21 | −176.7 (9) | N9—C17—N7—C12 | −4.2 (12) |
C18—C20—C21—N10 | −1.1 (14) | N8—C17—N7—Ag2 | −2.0 (10) |
C2—C1—N1—C5 | −0.7 (14) | N9—C17—N7—Ag2 | 175.2 (6) |
C2—C1—N1—Ag1 | −179.1 (8) | N10—Ag2—N7—C12 | 117 (2) |
N2—C5—N1—C1 | −178.7 (9) | N10—Ag2—N7—C17 | −63 (3) |
N3—C5—N1—C1 | 2.0 (12) | C14—C15—N9—C17 | −2.2 (12) |
N2—C5—N1—Ag1 | −0.4 (11) | C16—C15—N9—C17 | 178.4 (8) |
N3—C5—N1—Ag1 | −179.7 (6) | N8—C17—N9—C15 | −178.4 (8) |
N4—Ag1—N1—C1 | 134 (3) | N7—C17—N9—C15 | 4.5 (12) |
N4—Ag1—N1—C5 | −44 (3) | C20—C21—N10—C22 | 0.2 (13) |
C2—C3—N3—C5 | 0.2 (13) | C20—C21—N10—Ag2 | 178.9 (7) |
C4—C3—N3—C5 | −179.5 (9) | N11—C22—N10—C21 | −177.3 (8) |
N2—C5—N3—C3 | 178.9 (8) | N12—C22—N10—C21 | 0.5 (12) |
N1—C5—N3—C3 | −1.8 (12) | N11—C22—N10—Ag2 | 4.1 (10) |
C8—C9—N4—C11 | −0.9 (12) | N12—C22—N10—Ag2 | −178.2 (5) |
C10—C9—N4—C11 | 177.5 (8) | N7—Ag2—N10—C21 | 115 (2) |
C8—C9—N4—Ag1 | −174.8 (6) | N7—Ag2—N10—C22 | −66 (3) |
C10—C9—N4—Ag1 | 3.6 (11) | N11—C22—N12—C18 | 177.5 (8) |
N5—C11—N4—C9 | −177.2 (8) | N10—C22—N12—C18 | −0.2 (12) |
N6—C11—N4—C9 | 2.0 (12) | C20—C18—N12—C22 | −0.7 (12) |
N5—C11—N4—Ag1 | −3.4 (11) | C19—C18—N12—C22 | 177.3 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···O5 | 0.88 | 2.20 | 3.004 (10) | 152 |
N2—H2C···N6i | 0.88 | 2.17 | 3.053 (11) | 178 |
N5—H5A···N3ii | 0.88 | 2.20 | 3.078 (11) | 178 |
N5—H5B···O1ii | 0.88 | 2.33 | 3.042 (13) | 138 |
N8—H8B···O4 | 0.88 | 2.36 | 3.026 (12) | 133 |
N8—H8C···N12iii | 0.88 | 2.20 | 3.073 (11) | 175 |
N11—H11A···N9iv | 0.88 | 2.15 | 3.029 (10) | 176 |
N11—H11B···O2iv | 0.88 | 2.16 | 2.965 (11) | 151 |
Symmetry codes: (i) −x+1, y−1/2, z; (ii) −x+1, y+1/2, z; (iii) −x, y−1/2, z; (iv) −x, y+1/2, z. |
Experimental details
Crystal data | |
Chemical formula | [Ag(C5H7N3)(C6H9N3)]NO3 |
Mr | 402.18 |
Crystal system, space group | Orthorhombic, Pbc21 |
Temperature (K) | 120 |
a, b, c (Å) | 7.5689 (4), 19.1582 (7), 20.1826 (10) |
V (Å3) | 2926.6 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.40 |
Crystal size (mm) | 0.50 × 0.40 × 0.35 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.512, 0.616 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11376, 3244, 2647 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.129, 1.10 |
No. of reflections | 3244 |
No. of parameters | 403 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.95, −0.63 |
Absolute structure | Flack (1983), 0 Friedel pairs |
Absolute structure parameter | 0.07 (6) |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···O5 | 0.88 | 2.20 | 3.004 (10) | 152.4 |
N2—H2C···N6i | 0.88 | 2.17 | 3.053 (11) | 177.5 |
N5—H5A···N3ii | 0.88 | 2.20 | 3.078 (11) | 178.1 |
N5—H5B···O1ii | 0.88 | 2.33 | 3.042 (13) | 138.1 |
N8—H8B···O4 | 0.88 | 2.36 | 3.026 (12) | 133.0 |
N8—H8C···N12iii | 0.88 | 2.20 | 3.073 (11) | 174.5 |
N11—H11A···N9iv | 0.88 | 2.15 | 3.029 (10) | 176.3 |
N11—H11B···O2iv | 0.88 | 2.16 | 2.965 (11) | 151.4 |
Symmetry codes: (i) −x+1, y−1/2, z; (ii) −x+1, y+1/2, z; (iii) −x, y−1/2, z; (iv) −x, y+1/2, z. |
Acknowledgements
The author thanks the Natural Science Foundation of Heilongjiang Province for financial support.
References
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The nitrogen-containing bidentates, heterocyclic pyrimidine compounds are of great interests with capabilities to form stable hydrogen bonding network between aminos and nitrogen atoms of hetero rings. The crystal structure of the title compound (I) comprised of balanced NO3- anions and [Ag(2-amino-4-methylpyrimidine)(2-amino-4,6-dimethylpyrimidine)]+ cations. The central silver ion, coordinated to two nitrogen atoms from the pyrimidine rings of those two different ligands, giving linear N—Ag—N coordination geometries (Greenwood et al., 1997). The whole crystal structure was stabilized by multiple intermolecular N–H–N hydrogen bonding network and pi-pi stacking with the interplane distance of 3.65 Å (Munakata et al., 2000).