organic compounds
Ethyl 3-oxo-2-[(4-sulfamoylphenyl)hydrazono]butyrate
aDepartment of Chemistry, Faculty of Science, Banaras Hindu University, Varanasi 221 005, India, bDepartment of Chemistry, Udai Pratap College (Autonomuos), Varanasi 221 002, India, and cDepartment of Inorganic and Physical Chemistry, Indian Institute of Sciences, Bangalore 560 012, India
*Correspondence e-mail: drkaushalbhu@yahoo.co.in
In the title compound, C12H15N3O5S, an intramolecular N—H⋯O hydrogen bond between the hydrazine unit and one of the carbonyl groups may influence the molecular conformation. In the intermolecular N—H⋯O hydrogen bonds, including one which is bifurcated, link the molecules into a two-dimensional network.
Related literature
For background to sulfa drugs and their derivatives, see: Abbate et al. (2004); Badr (2008); Hanafy et al. (2007); Novinson et al. (1976); Supuran et al. (2003); Upadhyay et al. (2009); Zhong et al. (2007). For the synthesis of the title compound, see: Prakash & Gambhir (1964).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809036927/lh2879sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809036927/lh2879Isup2.hkl
Compound (I) was synthesized using the literature procedure (Novinson et al., 1976) as follows. Sulphanilamide (2 mmol, 344 mg) and sodium nitrite (~4 mmol, 300 mg) were dissolved separately in conc. HCl (2 ml) and distilled water (10 ml), respectively, followed by cooling on crushed ice. The cooled sodium nitrite solution was added to the sulphanilamide solution with constant stirring while maintaining the temperature. The resulting yellow solution was added to a mixture of ethyl aceto acetate (2 mmol, 0.25 ml) and sodium acetate (~37 mmol, 3 g) in distilled water (15 ml) with continuous stirring. The stirring was continued further for 2 h maintaining the temperature of the reaction vessel between 293–298 K. The resulting solids were filtered, washed with water, ethanol and finally, by diethyl ether. The crude product was recrystallized from a water–ethanol mixture (50% v/v) and dried in vacuo. Crystals were grown by layering a supersaturated solution of (I) in ethanol with diethylether and leaving for a few days.
Yield 76%. Spectroscopic anaylysis: 1HNMR (DMSO-d6, TMS, δp.p.m.) 11.60 (1H, –HN—N=C<), 7.85–7.54 (m, 4H, Ar—H), 7.34 (s, 2H, NH2),4.35–4.26 (2H, CH2), 2.50–2.42(3H, CH3 of C2H5), 1.33–1.26 (3H, CH3). 13C NMR (DMSO-d6, TMS, δ p.p.m.) 193.90 (>C=O),162.33 [C(OEt)=O], 145.16,138.31(C=C), 133.35, 127.36, 115.89, 114.76 (Ar—C), 61.37 (–CH2), 25.28,13.83 (–CH3).
H atoms were placed in calculated positions with C-H = 0.93 - 0.97Å and N-H = 0.86Å. They were included in the
in a riding-model approximation with Uiso(H) = 1.2Ueq(C,N) or 1.5Ueq(C) for methyl H atoms. The H atoms of the -NH2 group were refined independently with isotropic displacement parameters.Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999).C12H15N3O5S | F(000) = 656 |
Mr = 313.33 | Dx = 1.484 Mg m−3 |
Monoclinic, P21/n | Melting point: 398 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 7.490 (6) Å | Cell parameters from 598 reflections |
b = 14.819 (12) Å | θ = 2.5–27.5° |
c = 12.689 (10) Å | µ = 0.26 mm−1 |
β = 95.219 (14)° | T = 293 K |
V = 1402.6 (19) Å3 | Rectangular, colourless |
Z = 4 | 0.24 × 0.22 × 0.20 mm |
Bruker SMART APEX diffractometer | 3274 independent reflections |
Radiation source: fine-focus sealed tube | 2177 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.052 |
Detector resolution: 0.3 pixels mm-1 | θmax = 28.2°, θmin = 2.1° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −17→19 |
Tmin = 0.940, Tmax = 0.951 | l = −16→16 |
11777 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full with fixed elements per cycle | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.070 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.222 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.87 | w = 1/[σ2(Fo2) + (0.1321P)2 + 2.1941P] where P = (Fo2 + 2Fc2)/3 |
3274 reflections | (Δ/σ)max = 0.001 |
200 parameters | Δρmax = 0.59 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
C12H15N3O5S | V = 1402.6 (19) Å3 |
Mr = 313.33 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.490 (6) Å | µ = 0.26 mm−1 |
b = 14.819 (12) Å | T = 293 K |
c = 12.689 (10) Å | 0.24 × 0.22 × 0.20 mm |
β = 95.219 (14)° |
Bruker SMART APEX diffractometer | 3274 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2177 reflections with I > 2σ(I) |
Tmin = 0.940, Tmax = 0.951 | Rint = 0.052 |
11777 measured reflections |
R[F2 > 2σ(F2)] = 0.070 | 0 restraints |
wR(F2) = 0.222 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.87 | Δρmax = 0.59 e Å−3 |
3274 reflections | Δρmin = −0.32 e Å−3 |
200 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2438 (5) | 0.0661 (2) | 0.9456 (3) | 0.0391 (8) | |
C2 | 0.2126 (5) | 0.1343 (2) | 1.0159 (3) | 0.0429 (8) | |
H2 | 0.1983 | 0.1209 | 1.0862 | 0.051* | |
C3 | 0.2030 (5) | 0.2223 (2) | 0.9809 (3) | 0.0433 (8) | |
H3 | 0.1809 | 0.2684 | 1.0278 | 0.052* | |
C4 | 0.2258 (5) | 0.2424 (2) | 0.8772 (2) | 0.0372 (7) | |
C5 | 0.2609 (6) | 0.1745 (2) | 0.8081 (3) | 0.0518 (10) | |
H5 | 0.2790 | 0.1883 | 0.7384 | 0.062* | |
C6 | 0.2693 (6) | 0.0861 (2) | 0.8420 (3) | 0.0536 (10) | |
H6 | 0.2920 | 0.0401 | 0.7951 | 0.064* | |
C7 | 0.2498 (5) | −0.1296 (2) | 1.1080 (3) | 0.0400 (8) | |
C8 | 0.2482 (5) | −0.1381 (2) | 1.2239 (3) | 0.0451 (9) | |
C9 | 0.2452 (7) | −0.0539 (3) | 1.2876 (3) | 0.0659 (13) | |
H9A | 0.2411 | −0.0691 | 1.3609 | 0.099* | |
H9B | 0.1412 | −0.0190 | 1.2639 | 0.099* | |
H9C | 0.3513 | −0.0193 | 1.2791 | 0.099* | |
C10 | 0.2599 (5) | −0.2072 (2) | 1.0344 (3) | 0.0466 (9) | |
C11 | 0.2122 (7) | −0.3643 (3) | 0.9952 (4) | 0.0624 (12) | |
H11A | 0.1498 | −0.4147 | 1.0240 | 0.075* | |
H11B | 0.1458 | −0.3458 | 0.9296 | 0.075* | |
C12 | 0.3910 (8) | −0.3914 (3) | 0.9752 (5) | 0.0868 (17) | |
H12A | 0.4491 | −0.3427 | 0.9419 | 0.130* | |
H12B | 0.3847 | −0.4431 | 0.9294 | 0.130* | |
H12C | 0.4583 | −0.4064 | 1.0409 | 0.130* | |
H3A | 0.042 (6) | 0.330 (3) | 0.688 (4) | 0.055 (13)* | |
H3B | −0.064 (6) | 0.334 (3) | 0.769 (4) | 0.049 (14)* | |
N1 | 0.2500 (4) | −0.02524 (19) | 0.9754 (2) | 0.0469 (8) | |
H1 | 0.2567 | −0.0667 | 0.9286 | 0.056* | |
N2 | 0.2454 (4) | −0.0464 (2) | 1.0745 (2) | 0.0417 (7) | |
N3 | 0.0211 (6) | 0.3532 (2) | 0.7471 (3) | 0.0481 (8) | |
O1 | 0.1619 (4) | 0.40903 (16) | 0.9163 (2) | 0.0565 (8) | |
O2 | 0.3416 (4) | 0.37652 (19) | 0.7692 (2) | 0.0581 (8) | |
O4 | 0.2924 (5) | −0.19684 (19) | 0.9443 (2) | 0.0711 (10) | |
O5 | 0.2233 (5) | −0.28696 (17) | 1.0729 (2) | 0.0620 (8) | |
O6 | 0.2547 (5) | −0.21135 (18) | 1.2667 (2) | 0.0703 (9) | |
S1 | 0.19753 (14) | 0.35341 (5) | 0.82925 (7) | 0.0425 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.049 (2) | 0.0279 (16) | 0.0399 (17) | 0.0027 (14) | 0.0025 (15) | 0.0052 (13) |
C2 | 0.062 (2) | 0.0381 (18) | 0.0278 (15) | 0.0020 (16) | 0.0020 (15) | 0.0040 (13) |
C3 | 0.064 (2) | 0.0317 (17) | 0.0343 (16) | 0.0012 (15) | 0.0031 (15) | −0.0030 (13) |
C4 | 0.052 (2) | 0.0285 (15) | 0.0305 (15) | −0.0009 (14) | 0.0022 (14) | 0.0018 (12) |
C5 | 0.090 (3) | 0.0346 (18) | 0.0333 (17) | 0.0059 (19) | 0.0183 (18) | 0.0050 (14) |
C6 | 0.094 (3) | 0.0294 (17) | 0.0392 (19) | 0.0098 (19) | 0.0148 (19) | 0.0008 (14) |
C7 | 0.050 (2) | 0.0328 (17) | 0.0372 (17) | −0.0006 (14) | 0.0043 (15) | 0.0048 (13) |
C8 | 0.055 (2) | 0.0417 (19) | 0.0383 (18) | −0.0101 (16) | 0.0017 (16) | 0.0054 (15) |
C9 | 0.107 (4) | 0.049 (2) | 0.043 (2) | −0.015 (2) | 0.010 (2) | −0.0031 (18) |
C10 | 0.064 (2) | 0.0351 (18) | 0.0416 (19) | 0.0099 (16) | 0.0103 (17) | 0.0076 (15) |
C11 | 0.087 (3) | 0.043 (2) | 0.059 (3) | −0.006 (2) | 0.021 (2) | 0.0042 (18) |
C12 | 0.091 (4) | 0.053 (3) | 0.112 (5) | 0.004 (3) | −0.009 (3) | 0.000 (3) |
N1 | 0.073 (2) | 0.0307 (15) | 0.0374 (15) | 0.0042 (14) | 0.0051 (14) | 0.0063 (12) |
N2 | 0.0537 (18) | 0.0352 (15) | 0.0361 (14) | −0.0017 (13) | 0.0032 (12) | 0.0083 (12) |
N3 | 0.065 (2) | 0.0373 (17) | 0.0423 (18) | 0.0005 (16) | 0.0055 (16) | 0.0075 (14) |
O1 | 0.088 (2) | 0.0294 (12) | 0.0521 (15) | −0.0011 (13) | 0.0082 (14) | −0.0060 (11) |
O2 | 0.0708 (19) | 0.0462 (15) | 0.0591 (17) | −0.0080 (13) | 0.0152 (14) | 0.0121 (13) |
O4 | 0.134 (3) | 0.0380 (15) | 0.0465 (15) | 0.0136 (16) | 0.0350 (18) | 0.0071 (12) |
O5 | 0.113 (2) | 0.0307 (13) | 0.0460 (15) | 0.0019 (14) | 0.0270 (15) | 0.0046 (11) |
O6 | 0.129 (3) | 0.0427 (16) | 0.0384 (14) | −0.0148 (17) | 0.0026 (16) | 0.0117 (12) |
S1 | 0.0625 (6) | 0.0252 (4) | 0.0400 (5) | −0.0026 (4) | 0.0053 (4) | 0.0042 (3) |
C1—C6 | 1.379 (5) | C9—H9B | 0.9600 |
C1—C2 | 1.382 (5) | C9—H9C | 0.9600 |
C1—N1 | 1.404 (4) | C10—O4 | 1.200 (4) |
C2—C3 | 1.378 (5) | C10—O5 | 1.317 (4) |
C2—H2 | 0.9300 | C11—C12 | 1.443 (7) |
C3—C4 | 1.375 (5) | C11—O5 | 1.509 (5) |
C3—H3 | 0.9300 | C11—H11A | 0.9700 |
C4—C5 | 1.376 (5) | C11—H11B | 0.9700 |
C4—S1 | 1.760 (3) | C12—H12A | 0.9600 |
C5—C6 | 1.379 (5) | C12—H12B | 0.9600 |
C5—H5 | 0.9300 | C12—H12C | 0.9600 |
C6—H6 | 0.9300 | N1—N2 | 1.300 (4) |
C7—N2 | 1.304 (4) | N1—H1 | 0.8600 |
C7—C8 | 1.477 (5) | N3—S1 | 1.607 (4) |
C7—C10 | 1.488 (5) | N3—H3A | 0.85 (5) |
C8—O6 | 1.213 (4) | N3—H3B | 0.77 (4) |
C8—C9 | 1.488 (5) | O1—S1 | 1.423 (3) |
C9—H9A | 0.9600 | O2—S1 | 1.419 (3) |
C6—C1—C2 | 120.3 (3) | O4—C10—O5 | 122.4 (4) |
C6—C1—N1 | 117.4 (3) | O4—C10—C7 | 121.7 (3) |
C2—C1—N1 | 122.3 (3) | O5—C10—C7 | 115.9 (3) |
C3—C2—C1 | 119.5 (3) | C12—C11—O5 | 109.3 (4) |
C3—C2—H2 | 120.3 | C12—C11—H11A | 109.8 |
C1—C2—H2 | 120.3 | O5—C11—H11A | 109.8 |
C4—C3—C2 | 120.4 (3) | C12—C11—H11B | 109.8 |
C4—C3—H3 | 119.8 | O5—C11—H11B | 109.8 |
C2—C3—H3 | 119.8 | H11A—C11—H11B | 108.3 |
C3—C4—C5 | 120.0 (3) | C11—C12—H12A | 109.5 |
C3—C4—S1 | 120.8 (3) | C11—C12—H12B | 109.5 |
C5—C4—S1 | 119.1 (3) | H12A—C12—H12B | 109.5 |
C4—C5—C6 | 120.1 (3) | C11—C12—H12C | 109.5 |
C4—C5—H5 | 119.9 | H12A—C12—H12C | 109.5 |
C6—C5—H5 | 119.9 | H12B—C12—H12C | 109.5 |
C1—C6—C5 | 119.7 (3) | N2—N1—C1 | 119.3 (3) |
C1—C6—H6 | 120.1 | N2—N1—H1 | 120.3 |
C5—C6—H6 | 120.1 | C1—N1—H1 | 120.3 |
N2—C7—C8 | 113.7 (3) | N1—N2—C7 | 122.7 (3) |
N2—C7—C10 | 121.9 (3) | S1—N3—H3A | 111 (3) |
C8—C7—C10 | 124.4 (3) | S1—N3—H3B | 115 (3) |
O6—C8—C7 | 121.2 (3) | H3A—N3—H3B | 113 (5) |
O6—C8—C9 | 120.6 (3) | C10—O5—C11 | 116.1 (3) |
C7—C8—C9 | 118.1 (3) | O2—S1—O1 | 118.86 (18) |
C8—C9—H9A | 109.5 | O2—S1—N3 | 105.8 (2) |
C8—C9—H9B | 109.5 | O1—S1—N3 | 107.7 (2) |
H9A—C9—H9B | 109.5 | O2—S1—C4 | 109.76 (17) |
C8—C9—H9C | 109.5 | O1—S1—C4 | 107.32 (16) |
H9A—C9—H9C | 109.5 | N3—S1—C4 | 106.76 (17) |
H9B—C9—H9C | 109.5 | ||
C6—C1—C2—C3 | 1.5 (6) | N2—C7—C10—O5 | −165.3 (4) |
N1—C1—C2—C3 | −178.1 (3) | C8—C7—C10—O5 | 16.2 (6) |
C1—C2—C3—C4 | −0.6 (6) | C6—C1—N1—N2 | 172.9 (4) |
C2—C3—C4—C5 | −0.9 (6) | C2—C1—N1—N2 | −7.5 (5) |
C2—C3—C4—S1 | 175.3 (3) | C1—N1—N2—C7 | 179.7 (3) |
C3—C4—C5—C6 | 1.5 (6) | C8—C7—N2—N1 | 178.4 (3) |
S1—C4—C5—C6 | −174.8 (3) | C10—C7—N2—N1 | −0.2 (6) |
C2—C1—C6—C5 | −1.0 (6) | O4—C10—O5—C11 | −4.0 (6) |
N1—C1—C6—C5 | 178.7 (4) | C7—C10—O5—C11 | 173.1 (3) |
C4—C5—C6—C1 | −0.5 (7) | C12—C11—O5—C10 | 77.1 (5) |
N2—C7—C8—O6 | −178.8 (4) | C3—C4—S1—O2 | 133.9 (3) |
C10—C7—C8—O6 | −0.3 (6) | C5—C4—S1—O2 | −49.9 (4) |
N2—C7—C8—C9 | −1.0 (5) | C3—C4—S1—O1 | 3.4 (4) |
C10—C7—C8—C9 | 177.5 (4) | C5—C4—S1—O1 | 179.6 (3) |
N2—C7—C10—O4 | 11.8 (6) | C3—C4—S1—N3 | −111.9 (3) |
C8—C7—C10—O4 | −166.7 (4) | C5—C4—S1—N3 | 64.3 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4 | 0.86 | 1.95 | 2.597 (5) | 131 |
N3—H3B···O6i | 0.77 (5) | 2.33 (4) | 2.941 (6) | 137 (4) |
N3—H3B···O5i | 0.77 (5) | 2.52 (5) | 3.208 (6) | 149 (5) |
N3—H3A···O4ii | 0.85 (5) | 2.21 (5) | 3.003 (6) | 154 (4) |
Symmetry codes: (i) −x, −y, −z+2; (ii) −x+1/2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C12H15N3O5S |
Mr | 313.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 7.490 (6), 14.819 (12), 12.689 (10) |
β (°) | 95.219 (14) |
V (Å3) | 1402.6 (19) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.26 |
Crystal size (mm) | 0.24 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.940, 0.951 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11777, 3274, 2177 |
Rint | 0.052 |
(sin θ/λ)max (Å−1) | 0.665 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.070, 0.222, 0.87 |
No. of reflections | 3274 |
No. of parameters | 200 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.59, −0.32 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4 | 0.86 | 1.95 | 2.597 (5) | 131.00 |
N3—H3B···O6i | 0.77 (5) | 2.33 (4) | 2.941 (6) | 137 (4) |
N3—H3B···O5i | 0.77 (5) | 2.52 (5) | 3.208 (6) | 149 (5) |
N3—H3A···O4ii | 0.85 (5) | 2.21 (5) | 3.003 (6) | 154 (4) |
Symmetry codes: (i) −x, −y, −z+2; (ii) −x+1/2, y+1/2, −z+3/2. |
Acknowledgements
KKU and SU are grateful to the CSIR, New Delhi, for financial support.
References
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Sulfadrugs and their derivatives have attracted much attention due to their wide spectrum of pharamaceutical (Abbate et al., 2004; Badr, 2008; Supuran et al., 2003) and biological applications (Hanafy et al., 2007, Zhong et al., 2007). Recently we reported details of a diazo derivative of sulfathiazole (Upadhyay et al.,2009) as a naked eye sensor for Hg(II) in DMSO. Although the title compound (I) has been reported in the literature (Prakash & Gambhir, 1964) its crystal structure determination has not been undertaken until now.
The molecular structure of the title compound is shown in Fig. 1. An intramolecular N—H···O hydrogen bond between the hydrazine unit and one carbonyl groups may influence the molecular conformation. In the crystal structure, intermolecular N—H···O hydrogen bonds, including one which which is bifurcated, link molecules in a two-dimensional network (see Fig. 2).