metal-organic compounds
Bis[2-(benzylamino)pyridine-κN](2-formyl-6-methoxyphenolato-κ2O1,O6)(nitrato-κ2O,O′)nickel(II)
aDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA
*Correspondence e-mail: rbutcher99@yahoo.com
In the title compound, [Ni(C8H7O3)(NO3)(C12H12N2)2], the contains a NiII atom, two molecules of 2-(benzylamino)pyridine, a molecule of deprotonated o-vanillin (3-methoxysalicylaldehydate) and a bidentate nitrate anion. The NiII center is six-coordinated by two pyridine N atoms from 2-(benzylamino)pyridine, two O atoms from o-vanillin and two O atoms from the nitrate anion. The crystal packing shows two hydrogen bonds from the amine N—H group to the deprotonated phenol O atom of the o-vanillin moieties, as well as weak C—H⋯O secondary interactions. These interactions link the molecules into ribbons in the c direction. The steric requirement of the bidentate nitrate and its small bite angle [61.01 (3)°] cause some orientation of the two 2-(benzylamino)pyridine groups. As a result, this coordination environment of the NiII center is distorted octahedral, as the trans angles range from 158.65 (3) to 175.76 (3)° and the cis angles range from 61.01 (3) (for the bidentate nitrate O atoms) to 102.30 (4)°.
Related literature
For our continuing studies of nickel-containing metalloenzymes, see: Gultneh et al. (2008). For literature related to mixed ligand nitrato complexes of Ni, see: Fernández-Fernández et al. (2006); Tokii et al. (1979). For literature related to the of mixed ligand complexes of nickel, see: Gao et al. (2008). For a description of the Cambridge Structural Database, see: Allen (2002).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlisPro (Oxford Diffraction, 2009); cell CrysAlisPro; data reduction: CrysAlisPro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809035570/nc2156sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809035570/nc2156Isup2.hkl
The complex was synthesized by reacting 0.73 g (2.0 mmol) of Ni(NO3)2.6H2O in MeOH (20 ml) with a mixture of 0.302 g o-vanillin (2 mmol) and 0.370 g of 2-(benzylamino)pyridine (2 mmol). The secondary amine and the aldehyde were mixed in 30 mL of methanol (MeOH) and stirred overnight at 40 C. The solution of the salt and the two ligands was stirred overnight at room temperature. The mixture was evaporated under reduced pressure and dark green semi-solid was obtained. The solid was then dissolved in 50/50 MeOH/DMF. The solution obtained was filtered and layered with diethyl ether. Light yellow greenish X-ray quality crystals were obtained after slow diffusion of the diethyl ether into the MeOH/DMF solution.
H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms with a C—H distance of 0.95 to 0.99 Å and Uiso(H) = 1.2Ueq(C) [Uiso(H) = 1.5Ueq(C) for the CH3]. The positional parameters for the H atoms attached to N were refined with Uiso(H) = 1.2Ueq(N).
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the dinuclear complex, C32H31N5NiO6 showing the atom numbering scheme and 50% probability displacement ellipsoids. | |
Fig. 2. The molecular packing for C32H31N5NiO6, viewed down the a axis showing the intermolecular N—H···O and C—H···O interactions. |
[Ni(C8H7O3)(NO3)(C12H12N2)2] | F(000) = 1336 |
Mr = 640.33 | Dx = 1.465 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 10.3522 (2) Å | Cell parameters from 10239 reflections |
b = 16.7539 (3) Å | θ = 4.6–32.7° |
c = 16.8132 (3) Å | µ = 0.72 mm−1 |
β = 95.5831 (17)° | T = 110 K |
V = 2902.25 (9) Å3 | Plate, deep green |
Z = 4 | 0.48 × 0.41 × 0.22 mm |
Oxford Diffraction Xcalibur with a Ruby (Gemini Mo) detector diffractometer | 9636 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 6913 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 32.7°, θmin = 4.7° |
ω scans | h = −15→11 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −25→23 |
Tmin = 0.724, Tmax = 0.861 | l = −25→22 |
21278 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.92 | w = 1/[σ2(Fo2) + (0.0363P)2] where P = (Fo2 + 2Fc2)/3 |
9636 reflections | (Δ/σ)max = 0.003 |
404 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
[Ni(C8H7O3)(NO3)(C12H12N2)2] | V = 2902.25 (9) Å3 |
Mr = 640.33 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.3522 (2) Å | µ = 0.72 mm−1 |
b = 16.7539 (3) Å | T = 110 K |
c = 16.8132 (3) Å | 0.48 × 0.41 × 0.22 mm |
β = 95.5831 (17)° |
Oxford Diffraction Xcalibur with a Ruby (Gemini Mo) detector diffractometer | 9636 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 6913 reflections with I > 2σ(I) |
Tmin = 0.724, Tmax = 0.861 | Rint = 0.024 |
21278 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.071 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.92 | Δρmax = 0.37 e Å−3 |
9636 reflections | Δρmin = −0.42 e Å−3 |
404 parameters |
Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. (Oxford Diffraction, 2008) |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni | 0.202156 (14) | 0.653615 (8) | 0.569477 (9) | 0.01381 (4) | |
O1 | 0.02030 (8) | 0.63205 (5) | 0.61280 (5) | 0.01873 (17) | |
O2 | 0.19371 (8) | 0.63743 (5) | 0.69558 (5) | 0.01888 (18) | |
O3 | 0.00620 (9) | 0.61203 (6) | 0.74021 (5) | 0.0285 (2) | |
O1A | 0.39179 (8) | 0.66419 (4) | 0.57083 (5) | 0.01595 (17) | |
O2A | 0.21780 (8) | 0.53148 (5) | 0.56286 (5) | 0.01781 (17) | |
O3A | 0.62621 (8) | 0.71334 (4) | 0.61510 (5) | 0.01908 (18) | |
N | 0.07114 (10) | 0.62649 (6) | 0.68502 (6) | 0.0184 (2) | |
N1B | 0.14274 (9) | 0.65492 (5) | 0.44922 (6) | 0.01552 (19) | |
N2B | 0.30972 (10) | 0.73612 (6) | 0.41582 (6) | 0.0209 (2) | |
H2BN | 0.3426 (14) | 0.7295 (8) | 0.4665 (9) | 0.025* | |
N1C | 0.17410 (10) | 0.77842 (6) | 0.58129 (6) | 0.0164 (2) | |
N2C | 0.36709 (10) | 0.80155 (6) | 0.65929 (7) | 0.0202 (2) | |
H2CN | 0.3901 (14) | 0.7620 (8) | 0.6447 (9) | 0.024* | |
C1A | 0.47770 (11) | 0.60855 (6) | 0.59056 (7) | 0.0142 (2) | |
C2A | 0.60871 (11) | 0.63213 (7) | 0.61289 (7) | 0.0157 (2) | |
C3A | 0.75547 (12) | 0.74125 (7) | 0.63705 (9) | 0.0252 (3) | |
H3AA | 0.7832 | 0.7250 | 0.6921 | 0.038* | |
H3AB | 0.7574 | 0.7996 | 0.6332 | 0.038* | |
H3AC | 0.8143 | 0.7183 | 0.6009 | 0.038* | |
C4A | 0.70497 (12) | 0.57673 (7) | 0.63104 (7) | 0.0188 (2) | |
H4AA | 0.7919 | 0.5939 | 0.6442 | 0.023* | |
C5A | 0.67562 (12) | 0.49474 (7) | 0.63028 (7) | 0.0202 (3) | |
H5AA | 0.7424 | 0.4568 | 0.6435 | 0.024* | |
C6A | 0.55120 (12) | 0.46981 (7) | 0.61059 (7) | 0.0185 (2) | |
H6AA | 0.5320 | 0.4143 | 0.6098 | 0.022* | |
C7A | 0.45020 (11) | 0.52568 (6) | 0.59123 (7) | 0.0149 (2) | |
C8A | 0.32180 (12) | 0.49455 (7) | 0.57327 (7) | 0.0174 (2) | |
H8AA | 0.3155 | 0.4381 | 0.5687 | 0.021* | |
C1B | 0.03721 (12) | 0.60977 (7) | 0.42644 (8) | 0.0191 (2) | |
H1BA | 0.0027 | 0.5774 | 0.4657 | 0.023* | |
C2B | −0.02289 (12) | 0.60799 (8) | 0.35011 (8) | 0.0231 (3) | |
H2BA | −0.0960 | 0.5748 | 0.3364 | 0.028* | |
C3B | 0.02721 (13) | 0.65673 (7) | 0.29319 (8) | 0.0246 (3) | |
H3BA | −0.0136 | 0.6583 | 0.2401 | 0.030* | |
C4B | 0.13525 (13) | 0.70228 (7) | 0.31391 (7) | 0.0220 (3) | |
H4BA | 0.1692 | 0.7358 | 0.2754 | 0.026* | |
C5B | 0.19575 (11) | 0.69900 (7) | 0.39280 (7) | 0.0167 (2) | |
C6B | 0.36416 (13) | 0.80128 (8) | 0.37277 (10) | 0.0317 (3) | |
H6BA | 0.3370 | 0.8524 | 0.3956 | 0.038* | |
H6BB | 0.3268 | 0.7993 | 0.3163 | 0.038* | |
C7B | 0.50969 (12) | 0.80081 (7) | 0.37477 (7) | 0.0185 (2) | |
C8B | 0.56829 (14) | 0.85753 (7) | 0.32841 (8) | 0.0255 (3) | |
H8BA | 0.5159 | 0.8945 | 0.2969 | 0.031* | |
C9B | 0.70163 (14) | 0.86001 (8) | 0.32834 (8) | 0.0302 (3) | |
H9BA | 0.7401 | 0.8991 | 0.2972 | 0.036* | |
C10B | 0.77964 (14) | 0.80634 (8) | 0.37307 (9) | 0.0314 (3) | |
H10A | 0.8712 | 0.8077 | 0.3719 | 0.038* | |
C11B | 0.72309 (13) | 0.75061 (8) | 0.41959 (8) | 0.0274 (3) | |
H11A | 0.7760 | 0.7138 | 0.4510 | 0.033* | |
C12B | 0.58900 (12) | 0.74829 (7) | 0.42047 (7) | 0.0207 (3) | |
H12A | 0.5512 | 0.7101 | 0.4529 | 0.025* | |
C1C | 0.05938 (12) | 0.80597 (7) | 0.54716 (7) | 0.0200 (2) | |
H1CA | 0.0048 | 0.7697 | 0.5162 | 0.024* | |
C2C | 0.01632 (13) | 0.88294 (7) | 0.55423 (8) | 0.0256 (3) | |
H2CA | −0.0657 | 0.8994 | 0.5293 | 0.031* | |
C3C | 0.09726 (14) | 0.93606 (7) | 0.59929 (8) | 0.0271 (3) | |
H3CA | 0.0703 | 0.9896 | 0.6060 | 0.033* | |
C4C | 0.21554 (13) | 0.91095 (7) | 0.63380 (8) | 0.0234 (3) | |
H4CA | 0.2718 | 0.9472 | 0.6637 | 0.028* | |
C5C | 0.25326 (12) | 0.83049 (7) | 0.62454 (7) | 0.0175 (2) | |
C6C | 0.46296 (12) | 0.84853 (7) | 0.70677 (7) | 0.0215 (2) | |
H6CA | 0.5180 | 0.8119 | 0.7416 | 0.026* | |
H6CB | 0.4172 | 0.8839 | 0.7420 | 0.026* | |
C7C | 0.55110 (12) | 0.89975 (7) | 0.66056 (7) | 0.0182 (2) | |
C8C | 0.54335 (13) | 0.90071 (7) | 0.57792 (8) | 0.0216 (3) | |
H8CA | 0.4776 | 0.8707 | 0.5480 | 0.026* | |
C9C | 0.63066 (13) | 0.94512 (7) | 0.53805 (8) | 0.0251 (3) | |
H9CA | 0.6248 | 0.9450 | 0.4813 | 0.030* | |
C10C | 0.72632 (13) | 0.98958 (7) | 0.58141 (9) | 0.0262 (3) | |
H10B | 0.7858 | 1.0202 | 0.5544 | 0.031* | |
C11C | 0.73488 (14) | 0.98918 (8) | 0.66394 (9) | 0.0289 (3) | |
H11B | 0.8006 | 1.0193 | 0.6938 | 0.035* | |
C12C | 0.64761 (13) | 0.94482 (8) | 0.70305 (8) | 0.0264 (3) | |
H12B | 0.6536 | 0.9451 | 0.7598 | 0.032* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni | 0.01023 (7) | 0.01481 (7) | 0.01645 (7) | 0.00088 (6) | 0.00155 (5) | 0.00061 (6) |
O1 | 0.0134 (4) | 0.0241 (4) | 0.0185 (4) | 0.0016 (3) | 0.0008 (3) | 0.0026 (3) |
O2 | 0.0127 (4) | 0.0226 (4) | 0.0211 (4) | 0.0008 (3) | 0.0010 (3) | 0.0001 (3) |
O3 | 0.0223 (5) | 0.0413 (5) | 0.0234 (5) | 0.0010 (4) | 0.0104 (4) | 0.0052 (4) |
O1A | 0.0111 (4) | 0.0145 (4) | 0.0221 (4) | 0.0022 (3) | 0.0011 (3) | 0.0023 (3) |
O2A | 0.0153 (4) | 0.0168 (4) | 0.0215 (4) | −0.0003 (3) | 0.0029 (3) | 0.0001 (3) |
O3A | 0.0108 (4) | 0.0159 (4) | 0.0300 (5) | −0.0005 (3) | −0.0009 (3) | 0.0018 (3) |
N | 0.0152 (5) | 0.0192 (5) | 0.0212 (5) | 0.0023 (4) | 0.0036 (4) | 0.0009 (4) |
N1B | 0.0122 (5) | 0.0159 (4) | 0.0186 (5) | 0.0014 (4) | 0.0025 (4) | −0.0003 (4) |
N2B | 0.0193 (6) | 0.0219 (5) | 0.0215 (5) | −0.0045 (4) | 0.0014 (4) | 0.0043 (4) |
N1C | 0.0143 (5) | 0.0167 (5) | 0.0185 (5) | 0.0012 (4) | 0.0029 (4) | 0.0009 (4) |
N2C | 0.0180 (5) | 0.0170 (5) | 0.0253 (6) | 0.0014 (4) | 0.0003 (4) | −0.0052 (4) |
C1A | 0.0130 (5) | 0.0173 (5) | 0.0126 (5) | 0.0034 (5) | 0.0034 (4) | 0.0007 (4) |
C2A | 0.0136 (6) | 0.0181 (5) | 0.0157 (5) | 0.0013 (5) | 0.0028 (4) | 0.0016 (4) |
C3A | 0.0131 (6) | 0.0229 (6) | 0.0389 (8) | −0.0017 (5) | −0.0007 (5) | 0.0029 (6) |
C4A | 0.0130 (6) | 0.0234 (6) | 0.0199 (6) | 0.0023 (5) | 0.0011 (5) | 0.0003 (5) |
C5A | 0.0187 (6) | 0.0204 (6) | 0.0213 (6) | 0.0087 (5) | 0.0013 (5) | 0.0007 (5) |
C6A | 0.0225 (6) | 0.0157 (5) | 0.0176 (6) | 0.0041 (5) | 0.0030 (5) | 0.0003 (4) |
C7A | 0.0161 (6) | 0.0159 (5) | 0.0132 (5) | 0.0027 (5) | 0.0035 (4) | 0.0003 (4) |
C8A | 0.0215 (6) | 0.0144 (5) | 0.0167 (6) | −0.0004 (5) | 0.0042 (5) | 0.0004 (4) |
C1B | 0.0149 (6) | 0.0204 (6) | 0.0221 (6) | −0.0002 (5) | 0.0026 (5) | −0.0010 (5) |
C2B | 0.0171 (6) | 0.0275 (6) | 0.0245 (7) | −0.0018 (5) | 0.0004 (5) | −0.0047 (5) |
C3B | 0.0231 (7) | 0.0307 (7) | 0.0191 (6) | 0.0052 (6) | −0.0025 (5) | −0.0018 (5) |
C4B | 0.0258 (7) | 0.0218 (6) | 0.0187 (6) | 0.0023 (5) | 0.0042 (5) | 0.0009 (5) |
C5B | 0.0146 (6) | 0.0157 (5) | 0.0202 (6) | 0.0032 (5) | 0.0036 (5) | −0.0010 (5) |
C6B | 0.0232 (7) | 0.0243 (6) | 0.0471 (9) | −0.0016 (6) | 0.0009 (6) | 0.0174 (6) |
C7B | 0.0218 (6) | 0.0172 (5) | 0.0167 (6) | −0.0049 (5) | 0.0037 (5) | −0.0026 (5) |
C8B | 0.0331 (8) | 0.0228 (6) | 0.0209 (6) | −0.0066 (6) | 0.0049 (5) | 0.0023 (5) |
C9B | 0.0355 (8) | 0.0312 (7) | 0.0260 (7) | −0.0129 (6) | 0.0139 (6) | −0.0010 (6) |
C10B | 0.0227 (7) | 0.0376 (8) | 0.0355 (8) | −0.0064 (6) | 0.0108 (6) | −0.0058 (6) |
C11B | 0.0222 (7) | 0.0289 (7) | 0.0311 (7) | −0.0008 (6) | 0.0022 (6) | −0.0003 (6) |
C12B | 0.0234 (7) | 0.0193 (6) | 0.0200 (6) | −0.0037 (5) | 0.0047 (5) | −0.0004 (5) |
C1C | 0.0149 (6) | 0.0224 (6) | 0.0230 (6) | 0.0020 (5) | 0.0031 (5) | 0.0019 (5) |
C2C | 0.0214 (7) | 0.0245 (6) | 0.0315 (7) | 0.0079 (5) | 0.0054 (6) | 0.0048 (6) |
C3C | 0.0311 (8) | 0.0180 (6) | 0.0339 (8) | 0.0083 (6) | 0.0116 (6) | 0.0036 (5) |
C4C | 0.0257 (7) | 0.0174 (6) | 0.0280 (7) | −0.0002 (5) | 0.0070 (5) | −0.0018 (5) |
C5C | 0.0176 (6) | 0.0171 (5) | 0.0185 (6) | 0.0004 (5) | 0.0054 (5) | 0.0012 (4) |
C6C | 0.0223 (6) | 0.0233 (6) | 0.0184 (6) | −0.0018 (5) | −0.0002 (5) | −0.0033 (5) |
C7C | 0.0182 (6) | 0.0148 (5) | 0.0215 (6) | 0.0021 (5) | 0.0012 (5) | −0.0030 (5) |
C8C | 0.0209 (6) | 0.0226 (6) | 0.0206 (6) | 0.0016 (5) | −0.0018 (5) | −0.0025 (5) |
C9C | 0.0258 (7) | 0.0263 (6) | 0.0235 (6) | 0.0066 (6) | 0.0039 (5) | 0.0032 (5) |
C10C | 0.0247 (7) | 0.0180 (6) | 0.0376 (8) | 0.0026 (5) | 0.0110 (6) | 0.0010 (5) |
C11C | 0.0257 (7) | 0.0261 (6) | 0.0353 (8) | −0.0074 (6) | 0.0048 (6) | −0.0118 (6) |
C12C | 0.0281 (7) | 0.0283 (7) | 0.0228 (7) | −0.0041 (6) | 0.0025 (5) | −0.0085 (5) |
Ni—O1A | 1.9690 (8) | C3B—C4B | 1.3708 (18) |
Ni—N1B | 2.0555 (10) | C3B—H3BA | 0.9500 |
Ni—O2A | 2.0565 (8) | C4B—C5B | 1.4117 (17) |
Ni—O1 | 2.1148 (8) | C4B—H4BA | 0.9500 |
Ni—N1C | 2.1230 (9) | C6B—C7B | 1.5037 (18) |
Ni—O2 | 2.1476 (9) | C6B—H6BA | 0.9900 |
O1—N | 1.2790 (13) | C6B—H6BB | 0.9900 |
O2—N | 1.2772 (13) | C7B—C12B | 1.3842 (17) |
O3—N | 1.2218 (13) | C7B—C8B | 1.4038 (16) |
O1A—C1A | 1.3086 (13) | C8B—C9B | 1.381 (2) |
O2A—C8A | 1.2393 (14) | C8B—H8BA | 0.9500 |
O3A—C2A | 1.3727 (13) | C9B—C10B | 1.381 (2) |
O3A—C3A | 1.4315 (15) | C9B—H9BA | 0.9500 |
N1B—C1B | 1.3532 (15) | C10B—C11B | 1.3839 (19) |
N1B—C5B | 1.3594 (15) | C10B—H10A | 0.9500 |
N2B—C5B | 1.3563 (15) | C11B—C12B | 1.3901 (18) |
N2B—C6B | 1.4536 (16) | C11B—H11A | 0.9500 |
N2B—H2BN | 0.893 (15) | C12B—H12A | 0.9500 |
N1C—C1C | 1.3491 (15) | C1C—C2C | 1.3735 (17) |
N1C—C5C | 1.3585 (15) | C1C—H1CA | 0.9500 |
N2C—C5C | 1.3532 (16) | C2C—C3C | 1.394 (2) |
N2C—C6C | 1.4448 (16) | C2C—H2CA | 0.9500 |
N2C—H2CN | 0.754 (14) | C3C—C4C | 1.3692 (19) |
C1A—C7A | 1.4176 (15) | C3C—H3CA | 0.9500 |
C1A—C2A | 1.4273 (16) | C4C—C5C | 1.4163 (16) |
C2A—C4A | 1.3741 (17) | C4C—H4CA | 0.9500 |
C3A—H3AA | 0.9800 | C6C—C7C | 1.5200 (17) |
C3A—H3AB | 0.9800 | C6C—H6CA | 0.9900 |
C3A—H3AC | 0.9800 | C6C—H6CB | 0.9900 |
C4A—C5A | 1.4066 (17) | C7C—C8C | 1.3840 (17) |
C4A—H4AA | 0.9500 | C7C—C12C | 1.3928 (18) |
C5A—C6A | 1.3639 (17) | C8C—C9C | 1.3920 (18) |
C5A—H5AA | 0.9500 | C8C—H8CA | 0.9500 |
C6A—C7A | 1.4174 (16) | C9C—C10C | 1.3880 (19) |
C6A—H6AA | 0.9500 | C9C—H9CA | 0.9500 |
C7A—C8A | 1.4325 (17) | C10C—C11C | 1.3818 (19) |
C8A—H8AA | 0.9500 | C10C—H10B | 0.9500 |
C1B—C2B | 1.3709 (17) | C11C—C12C | 1.3845 (19) |
C1B—H1BA | 0.9500 | C11C—H11B | 0.9500 |
C2B—C3B | 1.3958 (18) | C12C—H12B | 0.9500 |
C2B—H2BA | 0.9500 | ||
O1A—Ni—N1B | 102.30 (4) | C2B—C3B—H3BA | 120.0 |
O1A—Ni—O2A | 90.37 (3) | C3B—C4B—C5B | 119.57 (12) |
N1B—Ni—O2A | 88.57 (3) | C3B—C4B—H4BA | 120.2 |
O1A—Ni—O1 | 158.65 (3) | C5B—C4B—H4BA | 120.2 |
N1B—Ni—O1 | 98.59 (4) | N2B—C5B—N1B | 116.67 (11) |
O2A—Ni—O1 | 85.76 (3) | N2B—C5B—C4B | 122.99 (11) |
O1A—Ni—N1C | 93.19 (3) | N1B—C5B—C4B | 120.30 (11) |
N1B—Ni—N1C | 92.92 (4) | N2B—C6B—C7B | 114.90 (11) |
O2A—Ni—N1C | 175.76 (3) | N2B—C6B—H6BA | 108.5 |
O1—Ni—N1C | 90.09 (3) | C7B—C6B—H6BA | 108.5 |
O1A—Ni—O2 | 97.83 (3) | N2B—C6B—H6BB | 108.5 |
N1B—Ni—O2 | 159.29 (4) | C7B—C6B—H6BB | 108.5 |
O2A—Ni—O2 | 86.49 (3) | H6BA—C6B—H6BB | 107.5 |
O1—Ni—O2 | 61.01 (3) | C12B—C7B—C8B | 118.26 (12) |
N1C—Ni—O2 | 90.74 (3) | C12B—C7B—C6B | 123.69 (11) |
N—O1—Ni | 92.38 (6) | C8B—C7B—C6B | 118.05 (11) |
N—O2—Ni | 90.93 (6) | C9B—C8B—C7B | 120.45 (13) |
C1A—O1A—Ni | 126.23 (7) | C9B—C8B—H8BA | 119.8 |
C8A—O2A—Ni | 124.12 (8) | C7B—C8B—H8BA | 119.8 |
C2A—O3A—C3A | 116.64 (9) | C8B—C9B—C10B | 120.75 (12) |
O3—N—O2 | 122.38 (10) | C8B—C9B—H9BA | 119.6 |
O3—N—O1 | 121.97 (10) | C10B—C9B—H9BA | 119.6 |
O2—N—O1 | 115.65 (10) | C9B—C10B—C11B | 119.33 (13) |
C1B—N1B—C5B | 118.41 (10) | C9B—C10B—H10A | 120.3 |
C1B—N1B—Ni | 115.38 (8) | C11B—C10B—H10A | 120.3 |
C5B—N1B—Ni | 126.14 (8) | C10B—C11B—C12B | 120.17 (13) |
C5B—N2B—C6B | 124.80 (11) | C10B—C11B—H11A | 119.9 |
C5B—N2B—H2BN | 117.1 (9) | C12B—C11B—H11A | 119.9 |
C6B—N2B—H2BN | 116.0 (9) | C7B—C12B—C11B | 121.02 (11) |
C1C—N1C—C5C | 117.93 (10) | C7B—C12B—H12A | 119.5 |
C1C—N1C—Ni | 114.83 (8) | C11B—C12B—H12A | 119.5 |
C5C—N1C—Ni | 126.99 (8) | N1C—C1C—C2C | 124.33 (12) |
C5C—N2C—C6C | 124.47 (10) | N1C—C1C—H1CA | 117.8 |
C5C—N2C—H2CN | 117.6 (12) | C2C—C1C—H1CA | 117.8 |
C6C—N2C—H2CN | 116.0 (12) | C1C—C2C—C3C | 117.60 (12) |
O1A—C1A—C7A | 124.58 (10) | C1C—C2C—H2CA | 121.2 |
O1A—C1A—C2A | 118.33 (10) | C3C—C2C—H2CA | 121.2 |
C7A—C1A—C2A | 117.09 (10) | C4C—C3C—C2C | 119.97 (12) |
O3A—C2A—C4A | 124.92 (11) | C4C—C3C—H3CA | 120.0 |
O3A—C2A—C1A | 113.64 (9) | C2C—C3C—H3CA | 120.0 |
C4A—C2A—C1A | 121.43 (10) | C3C—C4C—C5C | 119.38 (12) |
O3A—C3A—H3AA | 109.5 | C3C—C4C—H4CA | 120.3 |
O3A—C3A—H3AB | 109.5 | C5C—C4C—H4CA | 120.3 |
H3AA—C3A—H3AB | 109.5 | N2C—C5C—N1C | 117.11 (10) |
O3A—C3A—H3AC | 109.5 | N2C—C5C—C4C | 122.10 (11) |
H3AA—C3A—H3AC | 109.5 | N1C—C5C—C4C | 120.77 (11) |
H3AB—C3A—H3AC | 109.5 | N2C—C6C—C7C | 116.06 (10) |
C2A—C4A—C5A | 120.41 (11) | N2C—C6C—H6CA | 108.3 |
C2A—C4A—H4AA | 119.8 | C7C—C6C—H6CA | 108.3 |
C5A—C4A—H4AA | 119.8 | N2C—C6C—H6CB | 108.3 |
C6A—C5A—C4A | 119.96 (11) | C7C—C6C—H6CB | 108.3 |
C6A—C5A—H5AA | 120.0 | H6CA—C6C—H6CB | 107.4 |
C4A—C5A—H5AA | 120.0 | C8C—C7C—C12C | 118.51 (12) |
C5A—C6A—C7A | 120.77 (11) | C8C—C7C—C6C | 122.73 (11) |
C5A—C6A—H6AA | 119.6 | C12C—C7C—C6C | 118.70 (11) |
C7A—C6A—H6AA | 119.6 | C7C—C8C—C9C | 120.85 (12) |
C6A—C7A—C1A | 120.29 (11) | C7C—C8C—H8CA | 119.6 |
C6A—C7A—C8A | 117.17 (10) | C9C—C8C—H8CA | 119.6 |
C1A—C7A—C8A | 122.53 (10) | C10C—C9C—C8C | 119.83 (12) |
O2A—C8A—C7A | 128.59 (10) | C10C—C9C—H9CA | 120.1 |
O2A—C8A—H8AA | 115.7 | C8C—C9C—H9CA | 120.1 |
C7A—C8A—H8AA | 115.7 | C11C—C10C—C9C | 119.83 (12) |
N1B—C1B—C2B | 123.88 (12) | C11C—C10C—H10B | 120.1 |
N1B—C1B—H1BA | 118.1 | C9C—C10C—H10B | 120.1 |
C2B—C1B—H1BA | 118.1 | C10C—C11C—C12C | 119.91 (12) |
C1B—C2B—C3B | 117.65 (12) | C10C—C11C—H11B | 120.0 |
C1B—C2B—H2BA | 121.2 | C12C—C11C—H11B | 120.0 |
C3B—C2B—H2BA | 121.2 | C11C—C12C—C7C | 121.07 (12) |
C4B—C3B—C2B | 119.99 (12) | C11C—C12C—H12B | 119.5 |
C4B—C3B—H3BA | 120.0 | C7C—C12C—H12B | 119.5 |
O1A—Ni—O1—N | 7.28 (12) | C5A—C6A—C7A—C8A | −178.42 (11) |
N1B—Ni—O1—N | 175.29 (6) | O1A—C1A—C7A—C6A | 177.56 (10) |
O2A—Ni—O1—N | 87.39 (6) | C2A—C1A—C7A—C6A | −2.26 (16) |
N1C—Ni—O1—N | −91.74 (6) | O1A—C1A—C7A—C8A | −2.82 (17) |
O2—Ni—O1—N | −0.94 (6) | C2A—C1A—C7A—C8A | 177.37 (10) |
O1A—Ni—O2—N | −176.04 (6) | Ni—O2A—C8A—C7A | −0.24 (17) |
N1B—Ni—O2—N | −9.64 (12) | C6A—C7A—C8A—O2A | 171.95 (11) |
O2A—Ni—O2—N | −86.15 (6) | C1A—C7A—C8A—O2A | −7.68 (19) |
O1—Ni—O2—N | 0.94 (6) | C5B—N1B—C1B—C2B | −2.57 (17) |
N1C—Ni—O2—N | 90.63 (6) | Ni—N1B—C1B—C2B | 174.60 (10) |
N1B—Ni—O1A—C1A | −109.42 (9) | N1B—C1B—C2B—C3B | −1.00 (18) |
O2A—Ni—O1A—C1A | −20.80 (9) | C1B—C2B—C3B—C4B | 1.98 (18) |
O1—Ni—O1A—C1A | 58.45 (13) | C2B—C3B—C4B—C5B | 0.50 (18) |
N1C—Ni—O1A—C1A | 156.89 (9) | C6B—N2B—C5B—N1B | −163.03 (12) |
O2—Ni—O1A—C1A | 65.70 (9) | C6B—N2B—C5B—C4B | 19.34 (19) |
O1A—Ni—O2A—C8A | 11.28 (9) | C1B—N1B—C5B—N2B | −172.60 (10) |
N1B—Ni—O2A—C8A | 113.58 (9) | Ni—N1B—C5B—N2B | 10.56 (14) |
O1—Ni—O2A—C8A | −147.70 (9) | C1B—N1B—C5B—C4B | 5.09 (16) |
N1C—Ni—O2A—C8A | −135.8 (5) | Ni—N1B—C5B—C4B | −171.74 (8) |
O2—Ni—O2A—C8A | −86.54 (9) | C3B—C4B—C5B—N2B | 173.40 (11) |
Ni—O2—N—O3 | 178.85 (10) | C3B—C4B—C5B—N1B | −4.15 (17) |
Ni—O2—N—O1 | −1.51 (9) | C5B—N2B—C6B—C7B | −144.38 (12) |
Ni—O1—N—O3 | −178.82 (10) | N2B—C6B—C7B—C12B | −6.64 (19) |
Ni—O1—N—O2 | 1.54 (9) | N2B—C6B—C7B—C8B | 174.19 (12) |
O1A—Ni—N1B—C1B | 146.82 (8) | C12B—C7B—C8B—C9B | 0.47 (18) |
O2A—Ni—N1B—C1B | 56.75 (8) | C6B—C7B—C8B—C9B | 179.68 (13) |
O1—Ni—N1B—C1B | −28.74 (8) | C7B—C8B—C9B—C10B | 0.7 (2) |
N1C—Ni—N1B—C1B | −119.28 (8) | C8B—C9B—C10B—C11B | −1.3 (2) |
O2—Ni—N1B—C1B | −19.40 (14) | C9B—C10B—C11B—C12B | 0.7 (2) |
O1A—Ni—N1B—C5B | −36.26 (9) | C8B—C7B—C12B—C11B | −1.06 (18) |
O2A—Ni—N1B—C5B | −126.33 (9) | C6B—C7B—C12B—C11B | 179.78 (13) |
O1—Ni—N1B—C5B | 148.18 (9) | C10B—C11B—C12B—C7B | 0.49 (19) |
N1C—Ni—N1B—C5B | 57.64 (9) | C5C—N1C—C1C—C2C | −1.05 (18) |
O2—Ni—N1B—C5B | 157.52 (9) | Ni—N1C—C1C—C2C | 173.49 (10) |
O1A—Ni—N1C—C1C | 150.18 (8) | N1C—C1C—C2C—C3C | 0.46 (19) |
N1B—Ni—N1C—C1C | 47.67 (8) | C1C—C2C—C3C—C4C | 0.72 (19) |
O2A—Ni—N1C—C1C | −62.8 (5) | C2C—C3C—C4C—C5C | −1.24 (19) |
O1—Ni—N1C—C1C | −50.93 (8) | C6C—N2C—C5C—N1C | 179.54 (10) |
O2—Ni—N1C—C1C | −111.94 (8) | C6C—N2C—C5C—C4C | −1.87 (19) |
O1A—Ni—N1C—C5C | −35.87 (10) | C1C—N1C—C5C—N2C | 179.08 (10) |
N1B—Ni—N1C—C5C | −138.37 (10) | Ni—N1C—C5C—N2C | 5.29 (15) |
O2A—Ni—N1C—C5C | 111.2 (5) | C1C—N1C—C5C—C4C | 0.48 (16) |
O1—Ni—N1C—C5C | 123.02 (10) | Ni—N1C—C5C—C4C | −173.31 (9) |
O2—Ni—N1C—C5C | 62.02 (10) | C3C—C4C—C5C—N2C | −177.89 (12) |
Ni—O1A—C1A—C7A | 19.94 (15) | C3C—C4C—C5C—N1C | 0.64 (18) |
Ni—O1A—C1A—C2A | −160.25 (8) | C5C—N2C—C6C—C7C | −79.83 (15) |
C3A—O3A—C2A—C4A | 0.89 (17) | N2C—C6C—C7C—C8C | −1.43 (17) |
C3A—O3A—C2A—C1A | −179.98 (10) | N2C—C6C—C7C—C12C | −178.40 (11) |
O1A—C1A—C2A—O3A | 3.61 (15) | C12C—C7C—C8C—C9C | 0.57 (18) |
C7A—C1A—C2A—O3A | −176.56 (10) | C6C—C7C—C8C—C9C | −176.41 (11) |
O1A—C1A—C2A—C4A | −177.22 (11) | C7C—C8C—C9C—C10C | −0.49 (18) |
C7A—C1A—C2A—C4A | 2.60 (16) | C8C—C9C—C10C—C11C | 0.38 (19) |
O3A—C2A—C4A—C5A | 177.20 (11) | C9C—C10C—C11C—C12C | −0.37 (19) |
C1A—C2A—C4A—C5A | −1.86 (18) | C10C—C11C—C12C—C7C | 0.5 (2) |
C2A—C4A—C5A—C6A | 0.70 (18) | C8C—C7C—C12C—C11C | −0.56 (19) |
C4A—C5A—C6A—C7A | −0.39 (18) | C6C—C7C—C12C—C11C | 176.54 (12) |
C5A—C6A—C7A—C1A | 1.23 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3A—H3AC···O1i | 0.98 | 2.57 | 3.3537 (15) | 137 |
C4A—H4AA···O1i | 0.95 | 2.55 | 3.4357 (15) | 155 |
C4B—H4BA···O2ii | 0.95 | 2.54 | 3.4308 (15) | 157 |
C6B—H6BB···O2ii | 0.99 | 2.57 | 3.4670 (17) | 151 |
N2B—H2BN···O1A | 0.893 (15) | 2.088 (15) | 2.9215 (14) | 154.9 (12) |
N2C—H2CN···O1A | 0.754 (14) | 2.056 (14) | 2.7655 (13) | 156.8 (16) |
N2C—H2CN···O3A | 0.754 (14) | 2.669 (14) | 3.2124 (13) | 130.8 (13) |
Symmetry codes: (i) x+1, y, z; (ii) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C8H7O3)(NO3)(C12H12N2)2] |
Mr | 640.33 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 110 |
a, b, c (Å) | 10.3522 (2), 16.7539 (3), 16.8132 (3) |
β (°) | 95.5831 (17) |
V (Å3) | 2902.25 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.72 |
Crystal size (mm) | 0.48 × 0.41 × 0.22 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur with a Ruby (Gemini Mo) detector diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.724, 0.861 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21278, 9636, 6913 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.761 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.071, 0.92 |
No. of reflections | 9636 |
No. of parameters | 404 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.37, −0.42 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Ni—O1A | 1.9690 (8) | Ni—O1 | 2.1148 (8) |
Ni—N1B | 2.0555 (10) | Ni—N1C | 2.1230 (9) |
Ni—O2A | 2.0565 (8) | Ni—O2 | 2.1476 (9) |
O1A—Ni—N1B | 102.30 (4) | O1—Ni—N1C | 90.09 (3) |
O1A—Ni—O2A | 90.37 (3) | O1A—Ni—O2 | 97.83 (3) |
N1B—Ni—O2A | 88.57 (3) | N1B—Ni—O2 | 159.29 (4) |
O1A—Ni—O1 | 158.65 (3) | O2A—Ni—O2 | 86.49 (3) |
N1B—Ni—O1 | 98.59 (4) | O1—Ni—O2 | 61.01 (3) |
O2A—Ni—O1 | 85.76 (3) | N1C—Ni—O2 | 90.74 (3) |
O1A—Ni—N1C | 93.19 (3) | N—O1—Ni | 92.38 (6) |
N1B—Ni—N1C | 92.92 (4) | N—O2—Ni | 90.93 (6) |
O2A—Ni—N1C | 175.76 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3A—H3AC···O1i | 0.98 | 2.57 | 3.3537 (15) | 137.2 |
C4A—H4AA···O1i | 0.95 | 2.55 | 3.4357 (15) | 154.5 |
C4B—H4BA···O2ii | 0.95 | 2.54 | 3.4308 (15) | 156.6 |
C6B—H6BB···O2ii | 0.99 | 2.57 | 3.4670 (17) | 150.8 |
N2B—H2BN···O1A | 0.893 (15) | 2.088 (15) | 2.9215 (14) | 154.9 (12) |
N2C—H2CN···O1A | 0.754 (14) | 2.056 (14) | 2.7655 (13) | 156.8 (16) |
N2C—H2CN···O3A | 0.754 (14) | 2.669 (14) | 3.2124 (13) | 130.8 (13) |
Symmetry codes: (i) x+1, y, z; (ii) x, −y+3/2, z−1/2. |
Acknowledgements
RJB wishes to acknowledge the NSF-MRI program (grant No. CHE-0619278) for funds to purchase the diffractometer.
References
Allen, F. H. (2002). Acta Cryst. B58, 380–388. Web of Science CrossRef CAS IUCr Journals Google Scholar
Fernández-Fernández, M., Bastida, R., Maćias, A., Valencia, L. & Pérez-Lourido, P. (2006). Polyhedron, 25, 783–792. Google Scholar
Gao, H., Huang, Z., Song, K., Liu, F., Long, J., Hu, H. & Wu, Q. (2008). J. Polym. Sci. Part A Polym. Chem. 46, 1618–1628. Google Scholar
Gultneh, Y., Khan, A. R., Ahvazi, B. & Butcher, R. J. (2008). Polyhedron, 17, 3351–3360. Web of Science CSD CrossRef Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As part of our continuing studies (Gultneh et al. 2008) of nickel(II) complexes with relevance to the nickel containing metalloenzymes we wish to report the structure of the mixed ligand complex, bis(2-(benzylamino)pyridine-κN)(3-methoxysalicylaldehydo- κ2O,O')nitrato-κ2O,O' nickel(II). The title compound, C32H31N5NiO6, contains two 2-(benzylamino)pyridine ligands (2-BAP), a bidentate nitrate anion, and a deprotonated o-vanillin moiety coordinated to nickel. The nickel atom is six coordinated by two pyridine N atoms from 2-(benzylamino)pyridine, two O from o-vanillin and two O atoms from the nitrate anion. Thus in the title complex, the 2-BAP (2 molecules) coordinate to Ni individually forming pendant arms that render the structure flexible. Similar mixed ligand complexes have been synthesized (Fernández-Fernández et al. 2006), however, in this case, the nitrate coordinated to the metal through only one O donor atom as a monodentate ligand. 2-Aminopyridine containing N-aryl subsituents (a ligand with both an amine donor and a pyridine donor similar to the donors in 2-BAP) has been used (Gao et al. 2008) along with halogens such as bromide, to synthesize a series nickel(II) complexes with potential use as precatalysts for ethylene polymerization. A combination of bidentate nitrate ions and tridentate Schiff bases have been used to synthesize dinuclear nickel complex with ligands derived from salicylaldehydes and N-substituted trimethylenediamines (Tokii et al., 1979).
The Ni—O (nitrate) bond distances (see Table 1) [Ni—O(1), 2.1148 (8) Å; Ni—O(2), 2.1476 (9) Å], Ni—O (o-vanillin) bond distances [Ni—O(1 A), 1.9690 (8) Å; Ni—O(2 A), 2.0565 (8) Å] and Ni—N (2-BAP) bond distances [Ni—N(1B), 2.0555 (10) Å; Ni—N(1 C), 2.1230 (9) Å] are within the normal ranges observed in other Ni complexes containing similar ligands (Allen, 2002). The geometry about the central Ni is distorted octahedral due to the small bite angle (see Table 1) subtended by the bidentate nitrate anion (O1—Ni—O2, 61.01 (3)°). This causes some re-orientation of the two 2-(benzylamino)pyridine groups. As a result, this coordination environment of the Ni is distorted octahedral as the trans angles range from 158.65 (3)° to 175.76 (3)° and the cis angles range from 61.01 (3)° (for the bidentate nitrate anion O's) to 102.30 (4)°.
N—H···O hydrogen bonds and weak C—H···O secondary interactions link the molecules into ribbons in the c direction (see Table 2).