organic compounds
2-(3-Oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetic acid monohydrate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangothri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
In the title compound, C10H9NO3S·H2O, the thiomorpholine ring exists in a conformation intermediate between twist-boat and half-chair. An intermolecular O—H⋯O hydrogen bond links the acid and water molecules together. In the crystal packing, intermolecular O—H⋯O and C—H⋯O hydrogen bonds link the molecules into a three-dimensional network.
Related literature
For the biological activity of 4H-benzo(1,4)thiazine, see: Armenise et al. (1991); Gupta et al. (1993); Fringuelli et al. (2005). For medical applications of sulfone derivatives of 4H-benzo(1,4)thiazine, see: Shinji & Koshiro (1995); Szule et al. (1988); Culbertson (1991). For a related structure, see: Zhang et al. (2008). For bond-length data, see: Allen et al. (1987). For ring puckering parameters, see: Cremer & Pople (1975). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809034977/sj2641sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809034977/sj2641Isup2.hkl
A solution of potassium hydroxide (5.85 mmol) in water (10 ml) was added to the solution of ethyl (3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetate (3.9 mmol) in ethanol (10 ml). The resulting reaction mixture was stirred at room temperature for 24 h and the reaction completion was checked by TLC. The reaction mixture was poured into water and acidified with 4 M HCl to form (3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetic acid as colourless solid. Single crystals suitable for X-ray analysis were obtained by crystallization from dichloromethane under slow evaporation (M.p. 338 K).
Atom H1O2, H1W1 and H2W1 were located in a difference map and were refined freely. Other H atoms were positioned geometrically [C—H = 0.93 or 0.97 Å] and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids and the atom numbering scheme. The hydrogen bond is drawn as a dashed line. | |
Fig. 2. The crystal packing of the title compound, viewed along b axis. Intermolecular hydrogen bonds are shown by dashed lines. |
C10H9NO3S·H2O | F(000) = 504 |
Mr = 241.26 | Dx = 1.465 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7672 reflections |
a = 7.5897 (1) Å | θ = 3.4–33.1° |
b = 9.2208 (2) Å | µ = 0.29 mm−1 |
c = 15.6701 (3) Å | T = 100 K |
β = 94.336 (1)° | Block, colourless |
V = 1093.50 (3) Å3 | 0.49 × 0.34 × 0.11 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 4859 independent reflections |
Radiation source: fine-focus sealed tube | 3833 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ϕ and ω scans | θmax = 35.1°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −12→12 |
Tmin = 0.870, Tmax = 0.969 | k = −14→13 |
25955 measured reflections | l = −23→25 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.128 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.83 | w = 1/[σ2(Fo2) + (0.0915P)2 + 0.3956P] where P = (Fo2 + 2Fc2)/3 |
4859 reflections | (Δ/σ)max = 0.001? |
157 parameters | Δρmax = 0.54 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C10H9NO3S·H2O | V = 1093.50 (3) Å3 |
Mr = 241.26 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.5897 (1) Å | µ = 0.29 mm−1 |
b = 9.2208 (2) Å | T = 100 K |
c = 15.6701 (3) Å | 0.49 × 0.34 × 0.11 mm |
β = 94.336 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 4859 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 3833 reflections with I > 2σ(I) |
Tmin = 0.870, Tmax = 0.969 | Rint = 0.036 |
25955 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.128 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.83 | Δρmax = 0.54 e Å−3 |
4859 reflections | Δρmin = −0.26 e Å−3 |
157 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.25290 (3) | 0.20298 (3) | 0.368735 (18) | 0.02391 (8) | |
O1W | 0.17478 (12) | 0.72939 (10) | 0.31220 (6) | 0.02515 (17) | |
O1 | 0.47141 (12) | 0.56427 (9) | 0.33767 (6) | 0.02699 (18) | |
O2 | 0.94362 (11) | 0.62615 (9) | 0.40417 (6) | 0.02360 (16) | |
O3 | 0.90204 (12) | 0.44113 (9) | 0.31220 (6) | 0.02548 (17) | |
C1 | 0.46033 (14) | 0.11958 (11) | 0.38793 (6) | 0.01900 (18) | |
C2 | 0.47444 (16) | −0.03074 (12) | 0.39590 (7) | 0.0233 (2) | |
H2A | 0.3733 | −0.0879 | 0.3900 | 0.028* | |
C3 | 0.63845 (17) | −0.09543 (12) | 0.41263 (7) | 0.0247 (2) | |
H3A | 0.6469 | −0.1955 | 0.4193 | 0.030* | |
C4 | 0.78984 (16) | −0.01067 (12) | 0.41946 (7) | 0.0246 (2) | |
H4A | 0.8999 | −0.0544 | 0.4296 | 0.030* | |
C5 | 0.77815 (14) | 0.13934 (12) | 0.41127 (7) | 0.02197 (19) | |
H5A | 0.8801 | 0.1956 | 0.4156 | 0.026* | |
C6 | 0.61270 (13) | 0.20523 (11) | 0.39649 (6) | 0.01770 (17) | |
N1 | 0.59863 (11) | 0.35987 (9) | 0.39215 (6) | 0.01904 (16) | |
C7 | 0.46962 (14) | 0.43038 (12) | 0.34290 (7) | 0.02067 (19) | |
C8 | 0.32911 (14) | 0.33868 (13) | 0.29697 (7) | 0.0234 (2) | |
H8A | 0.3764 | 0.2918 | 0.2482 | 0.028* | |
H8B | 0.2309 | 0.3995 | 0.2760 | 0.028* | |
C9 | 0.73286 (14) | 0.45083 (11) | 0.43631 (7) | 0.02047 (18) | |
H9A | 0.7934 | 0.3959 | 0.4825 | 0.025* | |
H9B | 0.6764 | 0.5333 | 0.4613 | 0.025* | |
C10 | 0.86713 (13) | 0.50482 (11) | 0.37642 (7) | 0.01941 (18) | |
H1O2 | 1.028 (3) | 0.652 (3) | 0.3672 (15) | 0.064 (7)* | |
H2W1 | 0.155 (3) | 0.784 (2) | 0.2691 (15) | 0.056 (6)* | |
H1W1 | 0.270 (3) | 0.672 (2) | 0.3095 (13) | 0.043 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01398 (12) | 0.03081 (15) | 0.02713 (14) | −0.00430 (9) | 0.00291 (9) | 0.00246 (9) |
O1W | 0.0185 (4) | 0.0229 (4) | 0.0340 (4) | 0.0004 (3) | 0.0017 (3) | 0.0072 (3) |
O1 | 0.0224 (4) | 0.0214 (4) | 0.0371 (5) | 0.0033 (3) | 0.0020 (3) | 0.0071 (3) |
O2 | 0.0222 (4) | 0.0184 (3) | 0.0304 (4) | −0.0051 (3) | 0.0030 (3) | −0.0026 (3) |
O3 | 0.0231 (4) | 0.0232 (4) | 0.0306 (4) | −0.0046 (3) | 0.0049 (3) | −0.0046 (3) |
C1 | 0.0179 (4) | 0.0209 (4) | 0.0184 (4) | −0.0039 (3) | 0.0028 (3) | −0.0002 (3) |
C2 | 0.0279 (5) | 0.0217 (5) | 0.0208 (4) | −0.0064 (4) | 0.0046 (4) | −0.0016 (3) |
C3 | 0.0358 (6) | 0.0175 (4) | 0.0211 (4) | −0.0004 (4) | 0.0050 (4) | −0.0006 (3) |
C4 | 0.0264 (5) | 0.0226 (5) | 0.0251 (5) | 0.0052 (4) | 0.0030 (4) | 0.0020 (4) |
C5 | 0.0169 (4) | 0.0206 (4) | 0.0284 (5) | 0.0016 (3) | 0.0019 (3) | 0.0028 (4) |
C6 | 0.0162 (4) | 0.0169 (4) | 0.0201 (4) | −0.0009 (3) | 0.0022 (3) | 0.0013 (3) |
N1 | 0.0136 (3) | 0.0176 (4) | 0.0256 (4) | −0.0004 (3) | −0.0006 (3) | 0.0029 (3) |
C7 | 0.0150 (4) | 0.0233 (5) | 0.0239 (4) | 0.0020 (3) | 0.0027 (3) | 0.0048 (3) |
C8 | 0.0169 (4) | 0.0296 (5) | 0.0233 (5) | −0.0003 (4) | −0.0008 (3) | 0.0047 (4) |
C9 | 0.0172 (4) | 0.0196 (4) | 0.0243 (4) | −0.0020 (3) | −0.0001 (3) | 0.0002 (3) |
C10 | 0.0147 (4) | 0.0169 (4) | 0.0262 (5) | 0.0000 (3) | −0.0009 (3) | 0.0000 (3) |
S1—C1 | 1.7575 (11) | C4—C5 | 1.3914 (16) |
S1—C8 | 1.8064 (12) | C4—H4A | 0.9300 |
O1W—H2W1 | 0.85 (2) | C5—C6 | 1.3984 (15) |
O1W—H1W1 | 0.90 (2) | C5—H5A | 0.9300 |
O1—C7 | 1.2374 (13) | C6—N1 | 1.4311 (13) |
O2—C10 | 1.3189 (13) | N1—C7 | 1.3648 (13) |
O2—H1O2 | 0.93 (3) | N1—C9 | 1.4539 (13) |
O3—C10 | 1.2116 (14) | C7—C8 | 1.5014 (16) |
C1—C2 | 1.3951 (15) | C8—H8A | 0.9700 |
C1—C6 | 1.3985 (14) | C8—H8B | 0.9700 |
C2—C3 | 1.3873 (17) | C9—C10 | 1.5205 (16) |
C2—H2A | 0.9300 | C9—H9A | 0.9700 |
C3—C4 | 1.3871 (17) | C9—H9B | 0.9700 |
C3—H3A | 0.9300 | ||
C1—S1—C8 | 94.86 (5) | C7—N1—C6 | 123.32 (9) |
H2W1—O1W—H1W1 | 114 (2) | C7—N1—C9 | 116.19 (8) |
C10—O2—H1O2 | 108.8 (14) | C6—N1—C9 | 120.33 (8) |
C2—C1—C6 | 119.68 (10) | O1—C7—N1 | 120.11 (10) |
C2—C1—S1 | 120.78 (8) | O1—C7—C8 | 122.76 (10) |
C6—C1—S1 | 119.53 (8) | N1—C7—C8 | 117.12 (9) |
C3—C2—C1 | 120.38 (10) | C7—C8—S1 | 109.94 (7) |
C3—C2—H2A | 119.8 | C7—C8—H8A | 109.7 |
C1—C2—H2A | 119.8 | S1—C8—H8A | 109.7 |
C4—C3—C2 | 119.90 (10) | C7—C8—H8B | 109.7 |
C4—C3—H3A | 120.0 | S1—C8—H8B | 109.7 |
C2—C3—H3A | 120.0 | H8A—C8—H8B | 108.2 |
C3—C4—C5 | 120.42 (11) | N1—C9—C10 | 111.92 (9) |
C3—C4—H4A | 119.8 | N1—C9—H9A | 109.2 |
C5—C4—H4A | 119.8 | C10—C9—H9A | 109.2 |
C4—C5—C6 | 119.83 (10) | N1—C9—H9B | 109.2 |
C4—C5—H5A | 120.1 | C10—C9—H9B | 109.2 |
C6—C5—H5A | 120.1 | H9A—C9—H9B | 107.9 |
C1—C6—C5 | 119.75 (9) | O3—C10—O2 | 124.51 (10) |
C1—C6—N1 | 119.99 (9) | O3—C10—C9 | 123.56 (9) |
C5—C6—N1 | 120.24 (9) | O2—C10—C9 | 111.90 (9) |
C8—S1—C1—C2 | −142.00 (9) | C5—C6—N1—C7 | 149.31 (11) |
C8—S1—C1—C6 | 38.91 (9) | C1—C6—N1—C9 | 152.60 (10) |
C6—C1—C2—C3 | 0.30 (16) | C5—C6—N1—C9 | −25.91 (14) |
S1—C1—C2—C3 | −178.80 (8) | C6—N1—C7—O1 | −175.33 (10) |
C1—C2—C3—C4 | −1.55 (16) | C9—N1—C7—O1 | 0.07 (15) |
C2—C3—C4—C5 | 1.24 (17) | C6—N1—C7—C8 | 4.85 (15) |
C3—C4—C5—C6 | 0.33 (17) | C9—N1—C7—C8 | −179.75 (9) |
C2—C1—C6—C5 | 1.27 (15) | O1—C7—C8—S1 | −134.43 (10) |
S1—C1—C6—C5 | −179.63 (8) | N1—C7—C8—S1 | 45.39 (12) |
C2—C1—C6—N1 | −177.25 (9) | C1—S1—C8—C7 | −60.65 (8) |
S1—C1—C6—N1 | 1.86 (13) | C7—N1—C9—C10 | −77.23 (12) |
C4—C5—C6—C1 | −1.58 (16) | C6—N1—C9—C10 | 98.32 (11) |
C4—C5—C6—N1 | 176.93 (10) | N1—C9—C10—O3 | −26.48 (14) |
C1—C6—N1—C7 | −32.18 (15) | N1—C9—C10—O2 | 155.33 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1Wi | 0.93 (2) | 1.62 (2) | 2.5384 (13) | 168 (3) |
O1W—H2W1···O3ii | 0.85 (2) | 1.96 (2) | 2.7893 (13) | 168 (2) |
O1W—H1W1···O1 | 0.90 (2) | 1.85 (2) | 2.7221 (13) | 163.4 (19) |
C2—H2A···O1Wiii | 0.93 | 2.51 | 3.3666 (15) | 153 |
C9—H9A···O2iv | 0.97 | 2.58 | 3.4429 (14) | 149 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) x, y−1, z; (iv) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H9NO3S·H2O |
Mr | 241.26 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 7.5897 (1), 9.2208 (2), 15.6701 (3) |
β (°) | 94.336 (1) |
V (Å3) | 1093.50 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.49 × 0.34 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.870, 0.969 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 25955, 4859, 3833 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.809 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.128, 0.83 |
No. of reflections | 4859 |
No. of parameters | 157 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.54, −0.26 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1Wi | 0.93 (2) | 1.62 (2) | 2.5384 (13) | 168 (3) |
O1W—H2W1···O3ii | 0.85 (2) | 1.96 (2) | 2.7893 (13) | 168 (2) |
O1W—H1W1···O1 | 0.90 (2) | 1.85 (2) | 2.7221 (13) | 163.4 (19) |
C2—H2A···O1Wiii | 0.9300 | 2.5100 | 3.3666 (15) | 153.00 |
C9—H9A···O2iv | 0.9700 | 2.5800 | 3.4429 (14) | 149.00 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) x, y−1, z; (iv) −x+2, −y+1, −z+1. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
HKF thanks Universiti Sains Malaysia (USM) for the Research University Golden Goose Grant (No. 1001/PFIZIK/811012). WSL thanks the Malaysian government and USM for the award of the post of Assistant Research Officer under the Research University Golden Goose Grant (No. 1001/PFIZIK/811012).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
A number of molecules containing the 4H-benzo(1,4)thiazine nucleus in their structures exhibit a broad spectrum of biological activity, including antibacterial (Armenise et al., 1991), anticancer (Gupta et al., 1993), anti-rheumatic, anti-allergic, vasorelaxant, anti-arrhythmic and anti-hypertensive (Fringuelli et al., 2005) properties. The sulfone derivatives of 4H-benzo(1,4)thiazine have been reported to find a number of applications in medicine (Shinji & Koshiro, 1995; Szule et al., 1988; Culbertson, 1991). On the basis of these considerations, our particular attention was paid to the preparation of derivatives of (3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetic acid and we report here the structure of the title 4-benzothiazine derivative.
The asymmetric unit of the title compound (Fig. 1), contains one (3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetic acid and one water molecule. The bond lengths (Allen et al., 1987) and angles in the molecule are within normal ranges. The thiomorpholine ring (C1/C6–C8/N1/S1) exists in a conformation intermediate between twist-boat and half-chair and it is comparable to a closely related structure (Zhang et al., 2008). The puckering parameters (Cremer & Pople, 1975) are Q = 0.6852 (9) Å; Θ = 112.69 (8)° and ϕ = 152.79 (10)°. An intermolecular O1W1—H1W1···O1 hydrogen bond links the acid and water molecules together. In the crystal packing (Fig. 2), intermolecular O2—H1O2···O1W, O1W—H2W1···O3, C2—H2A···O1W and C9—H10A···O2 hydrogen bonds (Table 1) link the molecules into three-dimensional network.