metal-organic compounds
Aquabis[1-hydroxy-2-(imidazol-3-ium-1-yl)-1,1′-ethylidenediphophonato-κ2O,O′]zinc(II) dihydrate
aGerencia de Investigación y Aplicaciones, Centro Atómico Constituyentes, Comisión Nacional de Energía Atómica and, Escuela de Ciencia y Tecnología, Universidad Nacional General San Martín, Buenos Aires, Argentina
*Correspondence e-mail: freire@tandar.cnea.gov.ar
In the title complex, [Zn(C5H9NO7P2)2(H2O)]·2H2O, the zinc atom is coordinated by two zoledronate anions [zoledronate = (2-(1-imidazole)-1-hydroxy-1,1′-ethylidenediphophonate)] and one water molecule. The is 5. There is one half-molecule in the the zinc atom being located on a twofold rotation axis passing through the metal centre and the coordinating water O atom. The anion exists as a zwitterion with an overall charge of −1; the protonated nitrogen in the ring has a positive charge and the two phosphonates groups each have a single negative charge. Intermolecular O—H⋯O hydrogen bonds link the molecules. An N—H⋯O interaction is also present.
Related literature
For general background to bisphosphonates, see: Fleisch et al. (1968); Green et al. (1994); Fleisch (2000); Ross et al. (2004); Smith (2005); Ralston et al. (1989); Reid et al. (2005); Rauch & Glorieux (2005); Chesnut et al. (2004). For structures of transition metal (Ni, Co and Cu) complexes with the zoledronate anion, see: Cao et al. (2007, 2008). For metal complexes of other bisphosphonates (Etidronate and Pamidronate), see: Fernández et al. (2002); Li et al. (2008); Chen et al. (2008); Uchtman (1972). For a hexacoordinated zinc(II)–zoledronate complex, see: Freire & Vega (2009).
Experimental
Crystal data
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Refinement
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Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988); cell MSC/AFC Diffractometer Control Software; data reduction: MSC/AFC Diffractometer Control Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S160053680904286X/bq2166sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053680904286X/bq2166Isup2.hkl
Zoledronic Acid was obtained from Gador S. A. laboratory. Compound (II) was obtained by direct mix of a water solution of Zoledronic Acid and a water solution of ZnCl2. Colorless prismatic crystals were grown after a few days.
The H atoms attached to O were found in a difference Fourier map, further idealized (O—H: 0.82 Å - 0.90 Å) and finally allowed to ride. Those attached to C and N were placed at calculated positions (C—H: 0.93 Å; C—H2: 0.97 Å; N—H2: 0.90 Å) and allowed to ride. Displacement factors were taken as U(H)isot = x.U(host), x: 1.2 (C—H); 1.5 (C—H2, N—H2, O—H).
The following work is part of a project directed to the preparation and characterization of coordination complexes obtained by the interaction among metals and organic molecules of relevant pharmacological interest like bisphosphonates. An informative introduction on bisphosphonates has been made in the previous paper (Freire & Vega, 2009). Although few metal derivatives of Zoledronic acid have been reported in CSD (Allen, 2002), an isostructural compound of copper has been synthesized (Cao et al., 2008).
So, we present herein the
of a Zinc-Zoledronate complex: monozinc dizoledronate trihydrate, (I), Zn.(H2O).2(P2O7N2C5H9).2H2O. In (I), as in the similar hexacoordinated compound (Freire & Vega, 2009), the zoledronate anion exists as a zwitterion with an overall charge of -1; the protonated nitrogen in the ring has a positive charge and the two phosphonates groups each have a single negative charge.The
of Zn is 5 (Fig. 1) and the resulting is a trigonal bipiramid defined by O21, O21A, O11, O11A and O1W. Atoms O11A and O21A are generated by the (1 - x, y, 3/2 - z). The equatorial plane is defined by O11, O11A and O1W, the apexes are defined by and O21 and O21A. The apical Zn—O distance is 2.041 (2) Å while in the equatorial plane the mean value for the Zn—O distance is 2.004 (4) Å. The coordination angles in the equatorial plane are a little turned aside from the expected 120 ° theoretically due to the "bite" of the ligand: O11—Zn—O11A 134.08 (15)°, O11—Zn—O1W and O11A—Zn—O1W are 112.96 (8) °. The angle between the line defined by O21 and O21A with the normal to the equatorial plane (O11, O11A, O1W and Zn1) is 2.3 °.Considering the bisphosphonates groups, there are two distinct types of P—O bonds, as shown by the mean value in the following bond distances and angles: P—OH 1,576 (8), P - O 1.505 (5) Å, O—P—OH 109.4° (11), O—P—O 116.4° (14). The
of PO3 groups in compound (II) is more prominent than in the hexacoordinated complex (Freire & Vega, 2009), the non bonded torsion angle O12—P1···P2 O22 is -16.1°. In (I), the imidazol ring is planar, maximum deviation from the L. S. mean plane is 0.0026 Å for C3, and it is not coplanar with C2, between the plane of the ring and the bond N1—C2 is 3.4 ° and C2 is 0.0837 Å far from the ring. The torsion angle C1—C2—N1—C3 is of -78.62 ° and it is possible to describe it like - Syn-Clinal (-sc).Five hydrogen bonds, involving, H22, H1W, H1, H2WA and H2WB, provide intermolecular cohesion, defining a two-dimensional arrangement, while the three-dimensional net completes with two more hydrogen bonds, involving H2 from the aromatic ring and H12 from the bisphosphonate group (Fig. 2 and Table 2).
For general background to bisphosphonates, see: Fleisch et al. (1968); Green et al. (1994); Fleisch (2000); Ross et al. (2004); Smith (2005); Ralston et al. (1989); Reid et al. (2005); Rauch et al. (2005); Chesnut et al. (2004). For structures of transition metal (Ni, Co and Cu) complexes with the zoledronate anion, see: Cao et al. (2007, 2008). For metal complexes of other bisphosphonates (Etidronate and Pamidronate), see: Fernández et al. (2002); Li et al. (2008); Chen et al. (2008); Uchtman (1972). For a pentacoordinated zinc(II)—zoledronate complex, see: Freire & Vega (2009).
Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988); cell
MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988); data reduction: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. : Molecular view of (I), showing the labeling scheme used. Hydrogen bonding is shown in dashed lines. | |
Fig. 2. : Full packing diagram of (I). |
[Zn(C5H9N2O7P2)2(H2O)]·2H2O | F(000) = 1352 |
Mr = 661.58 | Dx = 1.966 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 42 reflections |
a = 12.089 (2) Å | θ = 8–25° |
b = 9.858 (2) Å | µ = 1.48 mm−1 |
c = 18.831 (4) Å | T = 293 K |
β = 95.09 (3)° | Prism, colorless |
V = 2235.3 (8) Å3 | 0.20 × 0.18 × 0.09 mm |
Z = 4 |
Rigaku AFC6 diffractometer | 1528 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.054 |
Graphite monochromator | θmax = 26.0°, θmin = 2.2° |
ω/2θ scans | h = −1→14 |
Absorption correction: ψ scan (North et al., 1968) | k = −1→12 |
Tmin = 0.75, Tmax = 0.87 | l = −23→23 |
2847 measured reflections | 3 standard reflections every 150 reflections |
2208 independent reflections | intensity decay: <3% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0521P)2 + 1.3378P] where P = (Fo2 + 2Fc2)/3 |
2208 reflections | (Δ/σ)max = 0.001 |
167 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.87 e Å−3 |
[Zn(C5H9N2O7P2)2(H2O)]·2H2O | V = 2235.3 (8) Å3 |
Mr = 661.58 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 12.089 (2) Å | µ = 1.48 mm−1 |
b = 9.858 (2) Å | T = 293 K |
c = 18.831 (4) Å | 0.20 × 0.18 × 0.09 mm |
β = 95.09 (3)° |
Rigaku AFC6 diffractometer | 1528 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.054 |
Tmin = 0.75, Tmax = 0.87 | 3 standard reflections every 150 reflections |
2847 measured reflections | intensity decay: <3% |
2208 independent reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.35 e Å−3 |
2208 reflections | Δρmin = −0.87 e Å−3 |
167 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.5000 | 0.50532 (5) | 0.7500 | 0.02015 (15) | |
P1 | 0.64482 (6) | 0.41327 (8) | 0.61862 (4) | 0.01916 (19) | |
P2 | 0.76934 (6) | 0.48891 (8) | 0.75923 (4) | 0.01749 (19) | |
O1 | 0.71512 (19) | 0.6590 (2) | 0.64590 (11) | 0.0237 (5) | |
H1 | 0.7154 | 0.7093 | 0.6806 | 0.043 (12)* | |
O11 | 0.54208 (18) | 0.4259 (3) | 0.65807 (12) | 0.0299 (5) | |
O12 | 0.6205 (2) | 0.4826 (2) | 0.54319 (13) | 0.0288 (5) | |
H12 | 0.6271 | 0.4369 | 0.5075 | 0.050 (14)* | |
O13 | 0.68721 (19) | 0.2707 (2) | 0.61059 (12) | 0.0277 (5) | |
O21 | 0.66152 (17) | 0.5108 (2) | 0.79201 (11) | 0.0253 (5) | |
O22 | 0.85809 (18) | 0.5945 (2) | 0.79009 (12) | 0.0269 (5) | |
H22 | 0.8339 | 0.6491 | 0.8177 | 0.051 (14)* | |
O23 | 0.81904 (19) | 0.3498 (2) | 0.76479 (12) | 0.0280 (5) | |
O1W | 0.5000 | 0.7080 (4) | 0.7500 | 0.0727 (17) | |
H1W | 0.5565 | 0.7530 | 0.7470 | 0.109* | |
O2W | 0.6191 (2) | 0.3463 (3) | 0.42704 (13) | 0.0394 (6) | |
H2WA | 0.5899 | 0.3910 | 0.3937 | 0.059* | |
H2WB | 0.6790 | 0.3124 | 0.4196 | 0.059* | |
N1 | 0.8788 (2) | 0.5706 (3) | 0.56618 (13) | 0.0218 (5) | |
N2 | 0.8895 (2) | 0.7275 (3) | 0.48801 (15) | 0.0328 (7) | |
H2 | 0.8972 | 0.8060 | 0.4691 | 0.039* | |
C1 | 0.7536 (2) | 0.5248 (3) | 0.66243 (16) | 0.0183 (6) | |
C2 | 0.8707 (2) | 0.5064 (3) | 0.63530 (16) | 0.0216 (6) | |
H2A | 0.9262 | 0.5453 | 0.6698 | 0.026* | |
H2B | 0.8865 | 0.4103 | 0.6315 | 0.026* | |
C3 | 0.8930 (3) | 0.7035 (3) | 0.55705 (18) | 0.0278 (7) | |
H3 | 0.9034 | 0.7680 | 0.5931 | 0.033* | |
C4 | 0.8718 (3) | 0.6092 (4) | 0.45095 (19) | 0.0351 (8) | |
H4 | 0.8657 | 0.5991 | 0.4017 | 0.042* | |
C5 | 0.8649 (3) | 0.5096 (4) | 0.49990 (17) | 0.0282 (7) | |
H5 | 0.8530 | 0.4178 | 0.4907 | 0.034* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0189 (2) | 0.0212 (3) | 0.0206 (3) | 0.000 | 0.00281 (18) | 0.000 |
P1 | 0.0201 (4) | 0.0188 (4) | 0.0187 (4) | −0.0007 (3) | 0.0023 (3) | −0.0026 (3) |
P2 | 0.0181 (4) | 0.0171 (4) | 0.0172 (4) | 0.0010 (3) | 0.0010 (3) | 0.0012 (3) |
O1 | 0.0348 (12) | 0.0148 (10) | 0.0211 (11) | 0.0063 (9) | −0.0003 (9) | 0.0005 (9) |
O11 | 0.0207 (11) | 0.0397 (14) | 0.0304 (13) | −0.0072 (10) | 0.0080 (9) | −0.0142 (11) |
O12 | 0.0363 (13) | 0.0275 (12) | 0.0217 (11) | 0.0036 (10) | −0.0033 (10) | −0.0023 (10) |
O13 | 0.0378 (13) | 0.0175 (11) | 0.0282 (11) | 0.0015 (10) | 0.0044 (10) | −0.0035 (10) |
O21 | 0.0190 (10) | 0.0362 (13) | 0.0208 (11) | 0.0021 (9) | 0.0029 (8) | −0.0011 (10) |
O22 | 0.0231 (11) | 0.0291 (13) | 0.0284 (12) | −0.0052 (9) | 0.0019 (9) | −0.0081 (11) |
O23 | 0.0360 (13) | 0.0193 (11) | 0.0296 (12) | 0.0064 (9) | 0.0072 (10) | 0.0062 (9) |
O1W | 0.025 (2) | 0.0195 (19) | 0.177 (6) | 0.000 | 0.027 (3) | 0.000 |
O2W | 0.0535 (17) | 0.0414 (15) | 0.0233 (12) | 0.0094 (13) | 0.0041 (11) | −0.0019 (11) |
N1 | 0.0212 (12) | 0.0244 (13) | 0.0203 (13) | −0.0008 (10) | 0.0051 (10) | −0.0006 (12) |
N2 | 0.0363 (16) | 0.0302 (15) | 0.0324 (15) | −0.0009 (12) | 0.0062 (13) | 0.0132 (14) |
C1 | 0.0207 (14) | 0.0144 (13) | 0.0197 (14) | 0.0035 (11) | 0.0020 (11) | 0.0013 (11) |
C2 | 0.0193 (14) | 0.0239 (16) | 0.0217 (15) | −0.0002 (12) | 0.0025 (12) | 0.0034 (13) |
C3 | 0.0288 (17) | 0.0252 (16) | 0.0304 (18) | −0.0040 (13) | 0.0073 (13) | 0.0004 (14) |
C4 | 0.0333 (19) | 0.049 (2) | 0.0230 (17) | 0.0047 (16) | 0.0012 (14) | 0.0041 (17) |
C5 | 0.0291 (17) | 0.0322 (18) | 0.0237 (16) | −0.0001 (14) | 0.0044 (13) | −0.0070 (15) |
Zn1—O1W | 1.999 (4) | O1W—H1W | 0.8200 |
Zn1—O11 | 2.006 (2) | O2W—H2WA | 0.8200 |
Zn1—O11i | 2.006 (2) | O2W—H2WB | 0.8200 |
Zn1—O21i | 2.041 (2) | N1—C3 | 1.335 (4) |
Zn1—O21 | 2.041 (2) | N1—C5 | 1.382 (4) |
P1—O13 | 1.508 (2) | N1—C2 | 1.458 (4) |
P1—O11 | 1.508 (2) | N2—C3 | 1.318 (4) |
P1—O12 | 1.580 (2) | N2—C4 | 1.366 (5) |
P1—C1 | 1.851 (3) | N2—H2 | 0.8600 |
P2—O23 | 1.497 (2) | C1—C2 | 1.558 (4) |
P2—O21 | 1.506 (2) | C2—H2A | 0.9700 |
P2—O22 | 1.569 (2) | C2—H2B | 0.9700 |
P2—C1 | 1.850 (3) | C3—H3 | 0.9300 |
O1—C1 | 1.427 (3) | C4—C5 | 1.355 (5) |
O1—H1 | 0.8200 | C4—H4 | 0.9300 |
O12—H12 | 0.8200 | C5—H5 | 0.9300 |
O22—H22 | 0.8200 | ||
O1W—Zn1—O11 | 112.97 (8) | H2WA—O2W—H2WB | 114.6 |
O1W—Zn1—O11i | 112.97 (7) | C3—N1—C5 | 108.5 (3) |
O11—Zn1—O11i | 134.06 (15) | C3—N1—C2 | 124.1 (3) |
O1W—Zn1—O21i | 88.48 (7) | C5—N1—C2 | 127.2 (3) |
O11—Zn1—O21i | 89.03 (9) | C3—N2—C4 | 109.9 (3) |
O11i—Zn1—O21i | 92.16 (9) | C3—N2—H2 | 125.0 |
O1W—Zn1—O21 | 88.48 (7) | C4—N2—H2 | 125.0 |
O11—Zn1—O21 | 92.16 (9) | O1—C1—C2 | 108.9 (2) |
O11i—Zn1—O21 | 89.03 (9) | O1—C1—P2 | 113.3 (2) |
O21i—Zn1—O21 | 176.96 (14) | C2—C1—P2 | 106.45 (19) |
O13—P1—O11 | 115.37 (14) | O1—C1—P1 | 104.41 (18) |
O13—P1—O12 | 110.54 (13) | C2—C1—P1 | 114.5 (2) |
O11—P1—O12 | 108.12 (14) | P2—C1—P1 | 109.42 (15) |
O13—P1—C1 | 111.36 (13) | N1—C2—C1 | 112.1 (2) |
O11—P1—C1 | 108.35 (13) | N1—C2—H2A | 109.2 |
O12—P1—C1 | 102.23 (13) | C1—C2—H2A | 109.2 |
O23—P2—O21 | 117.33 (14) | N1—C2—H2B | 109.2 |
O23—P2—O22 | 108.95 (14) | C1—C2—H2B | 109.2 |
O21—P2—O22 | 109.95 (13) | H2A—C2—H2B | 107.9 |
O23—P2—C1 | 104.47 (13) | N2—C3—N1 | 108.1 (3) |
O21—P2—C1 | 111.03 (13) | N2—C3—H3 | 126.0 |
O22—P2—C1 | 104.20 (13) | N1—C3—H3 | 126.0 |
C1—O1—H1 | 114.1 | C5—C4—N2 | 106.7 (3) |
P1—O11—Zn1 | 137.76 (14) | C5—C4—H4 | 126.6 |
P1—O12—H12 | 118.4 | N2—C4—H4 | 126.6 |
P2—O21—Zn1 | 132.07 (13) | C4—C5—N1 | 106.8 (3) |
P2—O22—H22 | 113.5 | C4—C5—H5 | 126.6 |
Zn1—O1W—H1W | 122.7 | N1—C5—H5 | 126.6 |
O13—P1—O11—Zn1 | 114.0 (2) | O13—P1—C1—O1 | 162.06 (18) |
O12—P1—O11—Zn1 | −121.6 (2) | O11—P1—C1—O1 | −70.0 (2) |
C1—P1—O11—Zn1 | −11.6 (3) | O12—P1—C1—O1 | 44.0 (2) |
O1W—Zn1—O11—P1 | 70.5 (2) | O13—P1—C1—C2 | 43.0 (2) |
O11i—Zn1—O11—P1 | −109.5 (2) | O11—P1—C1—C2 | 170.9 (2) |
O21i—Zn1—O11—P1 | 158.5 (2) | O12—P1—C1—C2 | −75.0 (2) |
O21—Zn1—O11—P1 | −18.7 (2) | O13—P1—C1—P2 | −76.38 (17) |
O23—P2—O21—Zn1 | −95.2 (2) | O11—P1—C1—P2 | 51.53 (18) |
O22—P2—O21—Zn1 | 139.62 (18) | O12—P1—C1—P2 | 165.57 (14) |
C1—P2—O21—Zn1 | 24.8 (2) | C3—N1—C2—C1 | 78.5 (4) |
O1W—Zn1—O21—P2 | −102.54 (19) | C5—N1—C2—C1 | −96.1 (3) |
O11—Zn1—O21—P2 | 10.4 (2) | O1—C1—C2—N1 | −39.8 (3) |
O11i—Zn1—O21—P2 | 144.5 (2) | P2—C1—C2—N1 | −162.3 (2) |
O23—P2—C1—O1 | −175.2 (2) | P1—C1—C2—N1 | 76.6 (3) |
O21—P2—C1—O1 | 57.4 (2) | C4—N2—C3—N1 | 0.6 (4) |
O22—P2—C1—O1 | −60.9 (2) | C5—N1—C3—N2 | −0.6 (4) |
O23—P2—C1—C2 | −55.5 (2) | C2—N1—C3—N2 | −176.1 (3) |
O21—P2—C1—C2 | 177.09 (19) | C3—N2—C4—C5 | −0.3 (4) |
O22—P2—C1—C2 | 58.8 (2) | N2—C4—C5—N1 | 0.0 (4) |
O23—P2—C1—P1 | 68.72 (17) | C3—N1—C5—C4 | 0.4 (4) |
O21—P2—C1—P1 | −58.67 (18) | C2—N1—C5—C4 | 175.7 (3) |
O22—P2—C1—P1 | −176.99 (13) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O2W | 0.82 | 1.75 | 2.566 (3) | 171 |
O22—H22···O13ii | 0.82 | 1.84 | 2.645 (3) | 167 |
O2W—H2WA···O21iii | 0.82 | 2.38 | 2.990 (3) | 132 |
O2W—H2WB···O13iv | 0.82 | 1.94 | 2.758 (4) | 173 |
N2—H2···O12v | 0.86 | 2.11 | 2.917 (4) | 157 |
O1W—H1W···O23ii | 0.82 | 1.81 | 2.632 (3) | 177 |
O1—H1···O23ii | 0.82 | 1.80 | 2.581 (3) | 160 |
Symmetry codes: (ii) −x+3/2, y+1/2, −z+3/2; (iii) x, −y+1, z−1/2; (iv) −x+3/2, −y+1/2, −z+1; (v) −x+3/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C5H9N2O7P2)2(H2O)]·2H2O |
Mr | 661.58 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 12.089 (2), 9.858 (2), 18.831 (4) |
β (°) | 95.09 (3) |
V (Å3) | 2235.3 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.48 |
Crystal size (mm) | 0.20 × 0.18 × 0.09 |
Data collection | |
Diffractometer | Rigaku AFC6 diffractometer |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.75, 0.87 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2847, 2208, 1528 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.096, 1.00 |
No. of reflections | 2208 |
No. of parameters | 167 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.87 |
Computer programs: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Zn1—O1W | 1.999 (4) | Zn1—O21 | 2.041 (2) |
Zn1—O11 | 2.006 (2) | ||
O1W—Zn1—O11 | 112.97 (8) | O1W—Zn1—O21 | 88.48 (7) |
O11—Zn1—O11i | 134.06 (15) | O11—Zn1—O21 | 92.16 (9) |
O11—Zn1—O21i | 89.03 (9) | O21i—Zn1—O21 | 176.96 (14) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O2W | 0.82 | 1.75 | 2.566 (3) | 170.8 |
O22—H22···O13ii | 0.82 | 1.84 | 2.645 (3) | 166.7 |
O2W—H2WA···O21iii | 0.82 | 2.38 | 2.990 (3) | 132.2 |
O2W—H2WB···O13iv | 0.82 | 1.94 | 2.758 (4) | 172.6 |
N2—H2···O12v | 0.86 | 2.11 | 2.917 (4) | 157.2 |
O1W—H1W···O23ii | 0.82 | 1.81 | 2.632 (3) | 176.8 |
O1—H1···O23ii | 0.82 | 1.80 | 2.581 (3) | 159.7 |
Symmetry codes: (ii) −x+3/2, y+1/2, −z+3/2; (iii) x, −y+1, z−1/2; (iv) −x+3/2, −y+1/2, −z+1; (v) −x+3/2, −y+3/2, −z+1. |
Footnotes
‡Member of Consejo Nacional de Ciencia y Técnica, Conicet.
Acknowledgements
We acknowledge PICT 25409, the Spanish Research Council (CSIC) for providing us with a free-of-charge licence to use the CSD system (Allen, 2002) and Professor Judith Howard for the donation of a Rigaku AFC6S four-circle diffractometer. EF is a member of the research staff of Conicet. The authors are grateful to Laboratorios Gador for providing the zoledronic acid.
References
Allen, F. H. (2002). Acta Cryst. B58, 380–388. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Cao, D.-K., Li, Y.-Z. & Zheng, L.-M. (2007). Inorg. Chem. 46, 7571–7578. Web of Science CSD CrossRef PubMed CAS Google Scholar
Cao, D.-K., Xie, X.-J., Li, Y.-Z. & Zheng, L.-M. (2008). Dalton Trans. pp. 5008–5015. Web of Science CSD CrossRef Google Scholar
Chen, H., Sun, Z., Dong, D., Meng, L., Zheng, X., Zhu, Y., Zha, Y. & Zhang, J. (2008). J. Coord. Chem. 61, 1316–1324. Web of Science CSD CrossRef CAS Google Scholar
Chesnut, C. H. III, Skag, A., Christiansen, C., Recker, R., Stakkestad, J. A., Hoiseth, A., Felsenberg, D., Huss, H., Gilbride, J., Schimmer, R. C. & Delmas, P. D. (2004). J. Bone Miner. Res. 19, 1241–1249. Web of Science CrossRef PubMed CAS Google Scholar
Fernández, D., Vega, D. & Goeta, A. (2002). Acta Cryst. C58, m494–m497. Web of Science CSD CrossRef IUCr Journals Google Scholar
Fleisch, H. (2000). Bisphosphonates in Bone Disease. From the Laboratory to the Patient, 4th ed. New York: Academic Press. Google Scholar
Fleisch, H., Russell, R. G. G., Bisaz, S., Termine, J. D. & Posner, A. S. (1968). Calcif. Tissue Res. 2, 49–59. CrossRef CAS Web of Science Google Scholar
Freire, E. & Vega, D. R. (2009). Acta Cryst. E65, m1428–m1429. Web of Science CrossRef IUCr Journals Google Scholar
Green, J. R., Mueller, K. & Jaeggi, K. A. (1994). J. Bone Miner. Res. 9, 745–751. CrossRef CAS PubMed Web of Science Google Scholar
Li, G., Fan, Y., Zhang, T., Ge, T. & Hou, H. (2008). J. Coord. Chem. 61, 540–549. Web of Science CSD CrossRef CAS Google Scholar
Molecular Structure Corporation (1988). MSC/AFC Diffractometer Control Software. MSC, The Woodlands, Texas, USA. Google Scholar
North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359. CrossRef IUCr Journals Web of Science Google Scholar
Ralston, S. H., Patel, U., Fraser, W. D., Gallacher, S. J., Dryburgh, F. J., Cowan, R. A. & Boyle, I. T. (1989). Lancet, 334, 1180–1182. CrossRef Google Scholar
Rauch, F. & Glorieux, F. H. (2005). Am. J. Med. Genet. C. Semin. Med. Genet. 139, 31–37. CrossRef Google Scholar
Reid, I. R., Miller, P., Lyles, K., Fraser, W., Brown, J. P., Saidi, Y., Mesenbrink, P., Su, G., Pak, J., Zelenakas, K., Luchi, M., Richardson, P. & Hosking, D. (2005). N. Engl. J. Med. 353, 898–908. Web of Science CrossRef PubMed CAS Google Scholar
Ross, J. R., Saunders, Y., Edmonds, P. M., Wonderling, D., Normand, C. & Broadley, K. (2004). Health Technol. Assess. 8, 1–176. CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Smith, M. R. (2005). Cancer Treat. Rev. 31 (Suppl 3), 19–25. Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Uchtman, V. A. (1972). J. Phys. Chem. 76, 1298–1304. CSD CrossRef CAS Web of Science Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The following work is part of a project directed to the preparation and characterization of coordination complexes obtained by the interaction among metals and organic molecules of relevant pharmacological interest like bisphosphonates. An informative introduction on bisphosphonates has been made in the previous paper (Freire & Vega, 2009). Although few metal derivatives of Zoledronic acid have been reported in CSD (Allen, 2002), an isostructural compound of copper has been synthesized (Cao et al., 2008).
So, we present herein the crystal structure of a Zinc-Zoledronate complex: monozinc dizoledronate trihydrate, (I), Zn.(H2O).2(P2O7N2C5H9).2H2O. In (I), as in the similar hexacoordinated compound (Freire & Vega, 2009), the zoledronate anion exists as a zwitterion with an overall charge of -1; the protonated nitrogen in the ring has a positive charge and the two phosphonates groups each have a single negative charge.
The coordination number of Zn is 5 (Fig. 1) and the resulting coordination polyhedron is a trigonal bipiramid defined by O21, O21A, O11, O11A and O1W. Atoms O11A and O21A are generated by the symmetry operation (1 - x, y, 3/2 - z). The equatorial plane is defined by O11, O11A and O1W, the apexes are defined by and O21 and O21A. The apical Zn—O distance is 2.041 (2) Å while in the equatorial plane the mean value for the Zn—O distance is 2.004 (4) Å. The coordination angles in the equatorial plane are a little turned aside from the expected 120 ° theoretically due to the "bite" of the ligand: O11—Zn—O11A 134.08 (15)°, O11—Zn—O1W and O11A—Zn—O1W are 112.96 (8) °. The angle between the line defined by O21 and O21A with the normal to the equatorial plane (O11, O11A, O1W and Zn1) is 2.3 °.
Considering the bisphosphonates groups, there are two distinct types of P—O bonds, as shown by the mean value in the following bond distances and angles: P—OH 1,576 (8), P - O 1.505 (5) Å, O—P—OH 109.4° (11), O—P—O 116.4° (14). The staggered conformation of PO3 groups in compound (II) is more prominent than in the hexacoordinated complex (Freire & Vega, 2009), the non bonded torsion angle O12—P1···P2 O22 is -16.1°. In (I), the imidazol ring is planar, maximum deviation from the L. S. mean plane is 0.0026 Å for C3, and it is not coplanar with C2, between the plane of the ring and the bond N1—C2 is 3.4 ° and C2 is 0.0837 Å far from the ring. The torsion angle C1—C2—N1—C3 is of -78.62 ° and it is possible to describe it like - Syn-Clinal (-sc).
Five hydrogen bonds, involving, H22, H1W, H1, H2WA and H2WB, provide intermolecular cohesion, defining a two-dimensional arrangement, while the three-dimensional net completes with two more hydrogen bonds, involving H2 from the aromatic ring and H12 from the bisphosphonate group (Fig. 2 and Table 2).