metal-organic compounds
Tetrakis[μ-4-(methylamino)benzoato-κ2O:O′]bis[(N,N-diethylnicotinamide-N1)zinc(II)] dihydrate
aDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey, bDepartment of Physics, Faculty of Science, Anadolu University, Department of Chemistry, 26470 Yenibağlar, Eskişehir, Turkey, cDepartment of Physics, Karabük University, 78050 Karabük, Turkey, and dDepartment of Chemistry, Kafkas University, 63100 Kars, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
The title molecule, [Zn2(C8H8NO2)4(C10H14N2O)2]·2H2O, is a centrosymmetric binuclear complex, with two ZnII ions [Zn⋯Zn' = 2.9301 (4) Å] bridged by four methylaminobenzoate (MAB) ligands. The four nearest O atoms around each ZnII ion form a distorted square-planar arrangement with the distorted square-pyramidal coordination completed by the pyridine N atom of the N,N-diethylnicotinamide (DENA) ligand. Each ZnII ion is displaced by 0.3519 (2) Å from the plane of the four O atoms, with an average Zn—O distance of 2.030 Å. The dihedral angles between carboxylate groups and adjacent benzene rings are 10.57 (10) and 16.63 (12)°, while the benzene rings are oriented at a dihedral angle of 81.84 (5)°. The pyridine ring is oriented at dihedral angles of 40.49 (6) and 51.25 (6)° with respect to the benzene rings. In the intermolecular O—H⋯O and N—H⋯O hydrogen bonds link the molecules into a three-dimensional network. The π–π contact between the inversion-related pyridine rings [centroid–centroid distance = 3.633 (1) Å] may further stabilize the crystal structure.
Related literature
For niacin, see: Krishnamachari (1974) and for the nicotinic acid derivative N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Hökelek et al. (1995, 2009); Speier & Fulop (1989); Usubaliev et al. (1980).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536809040409/ci2912sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809040409/ci2912Isup2.hkl
The title compound was prepared by the reaction of ZnSO4.H2O (0.9 g, 5 mmol) in H2O (30 ml) and DENA (1.78 g, 10 mmol) in H2O (20 ml) with sodium p-methylaminobenzoate (1.74 g, 10 mmol) in H2O (50 ml). The mixture was filtered and set aside to crystallize at ambient temperature for one week, giving colourless single crystals.
Atoms H61 and H62 (for H2O) were located in a difference Fourier map and refined isotropically. The remaining H atoms were positioned geometrically with N-H = 0.86 Å and C-H = 0.93, 0.97 and 0.96 Å, for aromatic, methylene and methyl H atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its
is reported herein.The title compound is a binuclear compound, consisting of two DENA and four methylaminobenzoate (MAB) ligands. The crystal structures of similar complexes of Cu2+ and Zn2+ ions, [Cu(C6H5COO)2(C5H5N)]2 (Usubaliev et al., 1980), [Cu(C6H5CO2)2(py)]2 (Speier & Fulop, 1989), [Cu2(C6H5COO)4(C10H14N2O)2] (Hökelek et al., 1995) and [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009) have also been reported. In these structures, the benzoate ion acts as a bidentate ligand.
The title dimeric complex, [Zn2(MAB)4(DENA)2].H2O, has a centre of symmetry and the two ZnII ions are surrounded by four MAB groups and two DENA ligands. The DENA ligands are coordinated to ZnII ions through pyridine N atoms only. The MAB groups act as bridging ligands. The Zn···Zn' distance is 2.9301 (4) Å. The average Zn—O distance is 2.0297 (13) Å (Table 1), and four O atoms of the bridging MAB ligands around each ZnII ion form a distorted square plane. The ZnII ion lies 0.3519 (2) Å below the least-squares plane. The average O—Zn—O bond angle is 88.30 (6)°. A distorted square-pyramidal arrangement around each ZnII ion is completed by the pyridine N atom of DENA ligand at 2.0516 (14) Å (Table 1) from the Zn atom. The N1—Zn1···Zn1' angle is 159.67 (4)° and the dihedral angle between plane through atoms Zn1, O1, O2, C1, Zn1', O1', O2'and C1' and the plane through Zn1, O3, O4, C8, Zn1', O3', O4', and C8' atoms is 89.00 (7)°. The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2—C7) and B (C9—C14) are 10.57 (10)° and 16.63 (12)°, respectively, while that between rings A and B is A/B = 81.84 (5)°. Ring C (N1/C15-C19) is oriented with respect to rings A and B at dihedral angles A/C = 40.49 (6) and B/C = 51.25 (6) °.
In the π–π contact between the pyridine rings, Cg1—Cg1i, [symmetry code (i): 2 - x, -y, 1 - z, where Cg1 is centroid of the ring C (N1/C15—C19)] may further stabilize the structure, with centroid-centroid distance of 3.633 (1) Å.
intermolecular O—H···O and N—H···O interactions (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. TheFor niacin, see: Krishnamachari (1974) and for the nicotinic acid derivative N,N-diethylnicotinamidegeneral background, see: Bigoli et al. (1972). For related structures, see: Hökelek et al. (1995, 2009); Speier & Fulop (1989); Usubaliev et al. (1980).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms have been omitted for clarity. Primed atoms are generated by the symmetry operator: (') 1 - x, -y, -z. |
[Zn2(C8H8NO2)4(C10H14N2O)2]·2H2O | F(000) = 1176 |
Mr = 1123.89 | Dx = 1.399 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 8651 reflections |
a = 10.1384 (2) Å | θ = 3.0–28.2° |
b = 25.6931 (3) Å | µ = 0.97 mm−1 |
c = 10.5170 (4) Å | T = 100 K |
β = 103.061 (2)° | Plate, colorless |
V = 2668.67 (12) Å3 | 0.52 × 0.52 × 0.10 mm |
Z = 2 |
Bruker Kappa APEXII CCD area-detector diffractometer | 6638 independent reflections |
Radiation source: fine-focus sealed tube | 5562 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
φ and ω scans | θmax = 28.3°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −13→10 |
Tmin = 0.609, Tmax = 0.905 | k = −30→34 |
23512 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.086 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0383P)2 + 2.063P] where P = (Fo2 + 2Fc2)/3 |
6638 reflections | (Δ/σ)max = 0.001 |
346 parameters | Δρmax = 0.74 e Å−3 |
0 restraints | Δρmin = −0.54 e Å−3 |
[Zn2(C8H8NO2)4(C10H14N2O)2]·2H2O | V = 2668.67 (12) Å3 |
Mr = 1123.89 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 10.1384 (2) Å | µ = 0.97 mm−1 |
b = 25.6931 (3) Å | T = 100 K |
c = 10.5170 (4) Å | 0.52 × 0.52 × 0.10 mm |
β = 103.061 (2)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 6638 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5562 reflections with I > 2σ(I) |
Tmin = 0.609, Tmax = 0.905 | Rint = 0.029 |
23512 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.086 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.74 e Å−3 |
6638 reflections | Δρmin = −0.54 e Å−3 |
346 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | −0.04338 (2) | −0.014479 (8) | 0.118981 (18) | 0.01584 (6) | |
O1 | −0.20843 (14) | 0.01538 (5) | −0.00434 (12) | 0.0240 (3) | |
O2 | 0.14508 (13) | −0.04361 (5) | 0.18309 (12) | 0.0202 (3) | |
O3 | 0.03250 (15) | 0.06111 (5) | 0.13786 (14) | 0.0268 (3) | |
O4 | −0.09993 (14) | −0.08625 (5) | 0.04128 (12) | 0.0225 (3) | |
O5 | −0.19322 (15) | 0.13404 (5) | 0.50417 (14) | 0.0281 (3) | |
O6 | 0.95980 (18) | 0.15202 (7) | 0.75046 (18) | 0.0397 (4) | |
H61 | 0.967 (4) | 0.1239 (15) | 0.808 (4) | 0.087 (12)* | |
H62 | 0.904 (4) | 0.1385 (15) | 0.671 (4) | 0.088 (13)* | |
N1 | −0.12123 (15) | −0.00735 (6) | 0.28204 (14) | 0.0166 (3) | |
N2 | −0.39214 (16) | 0.12268 (6) | 0.35808 (15) | 0.0201 (3) | |
N3 | −0.73560 (17) | 0.14248 (7) | −0.25237 (16) | 0.0279 (4) | |
H3A | −0.7889 | 0.1404 | −0.1995 | 0.033* | |
N4 | 0.2505 (2) | 0.28515 (7) | 0.3274 (2) | 0.0434 (5) | |
H4A | 0.3067 | 0.3035 | 0.2962 | 0.052* | |
C1 | −0.23030 (18) | 0.03966 (7) | −0.11144 (16) | 0.0168 (3) | |
C2 | −0.36417 (18) | 0.06493 (7) | −0.15463 (16) | 0.0162 (3) | |
C3 | −0.39620 (19) | 0.09599 (7) | −0.26573 (17) | 0.0194 (4) | |
H3 | −0.3338 | 0.0997 | −0.3178 | 0.023* | |
C4 | −0.5190 (2) | 0.12146 (7) | −0.29995 (17) | 0.0217 (4) | |
H4 | −0.5382 | 0.1421 | −0.3744 | 0.026* | |
C5 | −0.61546 (19) | 0.11639 (7) | −0.22320 (17) | 0.0204 (4) | |
C6 | −0.58436 (19) | 0.08385 (7) | −0.11255 (18) | 0.0217 (4) | |
H6 | −0.6477 | 0.0789 | −0.0620 | 0.026* | |
C7 | −0.46113 (19) | 0.05944 (7) | −0.07914 (17) | 0.0194 (4) | |
H7 | −0.4413 | 0.0388 | −0.0047 | 0.023* | |
C8 | 0.08144 (18) | 0.09445 (7) | 0.07307 (17) | 0.0196 (4) | |
C9 | 0.1199 (2) | 0.14569 (7) | 0.13448 (17) | 0.0212 (4) | |
C10 | 0.2042 (2) | 0.17976 (7) | 0.0866 (2) | 0.0248 (4) | |
H10 | 0.2328 | 0.1713 | 0.0112 | 0.030* | |
C11 | 0.2458 (2) | 0.22608 (8) | 0.1502 (2) | 0.0298 (4) | |
H11 | 0.3032 | 0.2481 | 0.1178 | 0.036* | |
C12 | 0.2017 (2) | 0.24024 (8) | 0.2638 (2) | 0.0304 (5) | |
C13 | 0.1107 (2) | 0.20754 (8) | 0.3067 (2) | 0.0321 (5) | |
H13 | 0.0755 | 0.2173 | 0.3776 | 0.038* | |
C14 | 0.0728 (2) | 0.16080 (8) | 0.24425 (19) | 0.0274 (4) | |
H14 | 0.0147 | 0.1388 | 0.2758 | 0.033* | |
C15 | −0.10860 (18) | −0.04226 (7) | 0.37916 (16) | 0.0170 (3) | |
H15 | −0.0671 | −0.0740 | 0.3710 | 0.020* | |
C16 | −0.15508 (19) | −0.03269 (7) | 0.49092 (17) | 0.0195 (4) | |
H16 | −0.1474 | −0.0580 | 0.5555 | 0.023* | |
C17 | −0.21321 (18) | 0.01504 (7) | 0.50527 (17) | 0.0189 (3) | |
H17 | −0.2428 | 0.0227 | 0.5807 | 0.023* | |
C18 | −0.22681 (18) | 0.05145 (7) | 0.40509 (16) | 0.0166 (3) | |
C19 | −0.18061 (18) | 0.03849 (7) | 0.29495 (16) | 0.0174 (3) | |
H19 | −0.1911 | 0.0625 | 0.2272 | 0.021* | |
C20 | −0.27156 (19) | 0.10611 (7) | 0.42525 (17) | 0.0190 (4) | |
C21 | −0.4910 (2) | 0.09017 (8) | 0.26852 (18) | 0.0238 (4) | |
H21A | −0.4441 | 0.0615 | 0.2379 | 0.029* | |
H21B | −0.5342 | 0.1108 | 0.1933 | 0.029* | |
C22 | −0.5985 (2) | 0.06864 (9) | 0.3335 (2) | 0.0320 (5) | |
H22A | −0.6640 | 0.0495 | 0.2707 | 0.048* | |
H22B | −0.6426 | 0.0968 | 0.3672 | 0.048* | |
H22C | −0.5570 | 0.0460 | 0.4037 | 0.048* | |
C23 | −0.4330 (2) | 0.17653 (7) | 0.3789 (2) | 0.0264 (4) | |
H23A | −0.3975 | 0.1861 | 0.4695 | 0.032* | |
H23B | −0.5310 | 0.1784 | 0.3616 | 0.032* | |
C24 | −0.3819 (3) | 0.21482 (9) | 0.2916 (3) | 0.0398 (6) | |
H24A | −0.4139 | 0.2491 | 0.3050 | 0.060* | |
H24B | −0.4147 | 0.2049 | 0.2020 | 0.060* | |
H24C | −0.2847 | 0.2147 | 0.3124 | 0.060* | |
C25 | −0.7761 (2) | 0.17342 (9) | −0.3688 (2) | 0.0345 (5) | |
H25A | −0.8664 | 0.1862 | −0.3752 | 0.052* | |
H25B | −0.7740 | 0.1524 | −0.4438 | 0.052* | |
H25C | −0.7151 | 0.2022 | −0.3650 | 0.052* | |
C26 | 0.2125 (4) | 0.30333 (9) | 0.4443 (2) | 0.0561 (8) | |
H26A | 0.2589 | 0.3353 | 0.4726 | 0.084* | |
H26B | 0.2368 | 0.2776 | 0.5118 | 0.084* | |
H26C | 0.1165 | 0.3091 | 0.4261 | 0.084* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01825 (11) | 0.01770 (11) | 0.01276 (10) | 0.00284 (8) | 0.00601 (7) | 0.00051 (7) |
O1 | 0.0237 (7) | 0.0314 (7) | 0.0170 (6) | 0.0086 (6) | 0.0049 (5) | 0.0050 (5) |
O2 | 0.0183 (6) | 0.0244 (7) | 0.0186 (6) | 0.0045 (5) | 0.0054 (5) | 0.0017 (5) |
O3 | 0.0310 (8) | 0.0206 (7) | 0.0336 (7) | 0.0001 (6) | 0.0176 (6) | −0.0022 (6) |
O4 | 0.0273 (7) | 0.0194 (6) | 0.0198 (6) | −0.0003 (5) | 0.0036 (5) | −0.0022 (5) |
O5 | 0.0265 (8) | 0.0257 (7) | 0.0314 (7) | −0.0034 (6) | 0.0053 (6) | −0.0094 (6) |
O6 | 0.0400 (10) | 0.0393 (9) | 0.0388 (9) | −0.0006 (8) | 0.0065 (8) | 0.0140 (8) |
N1 | 0.0162 (7) | 0.0194 (7) | 0.0142 (6) | 0.0017 (6) | 0.0035 (5) | −0.0004 (5) |
N2 | 0.0231 (8) | 0.0165 (7) | 0.0222 (7) | 0.0021 (6) | 0.0080 (6) | 0.0000 (6) |
N3 | 0.0219 (9) | 0.0358 (10) | 0.0256 (8) | 0.0091 (7) | 0.0048 (7) | −0.0014 (7) |
N4 | 0.0683 (15) | 0.0228 (9) | 0.0382 (11) | −0.0077 (9) | 0.0102 (10) | −0.0057 (8) |
C1 | 0.0204 (9) | 0.0164 (8) | 0.0134 (7) | 0.0007 (7) | 0.0032 (6) | −0.0038 (6) |
C2 | 0.0172 (8) | 0.0170 (8) | 0.0141 (7) | 0.0002 (7) | 0.0031 (6) | −0.0016 (6) |
C3 | 0.0222 (9) | 0.0218 (9) | 0.0156 (8) | 0.0010 (7) | 0.0072 (7) | −0.0015 (7) |
C4 | 0.0249 (10) | 0.0235 (9) | 0.0161 (8) | 0.0043 (7) | 0.0036 (7) | 0.0021 (7) |
C5 | 0.0176 (9) | 0.0221 (9) | 0.0203 (8) | 0.0027 (7) | 0.0017 (7) | −0.0051 (7) |
C6 | 0.0189 (9) | 0.0268 (9) | 0.0207 (8) | −0.0022 (7) | 0.0074 (7) | −0.0020 (7) |
C7 | 0.0214 (9) | 0.0203 (9) | 0.0167 (8) | −0.0016 (7) | 0.0048 (7) | 0.0010 (6) |
C8 | 0.0166 (9) | 0.0202 (9) | 0.0213 (8) | 0.0039 (7) | 0.0026 (7) | −0.0008 (7) |
C9 | 0.0240 (10) | 0.0180 (8) | 0.0194 (8) | 0.0033 (7) | 0.0003 (7) | 0.0000 (7) |
C10 | 0.0232 (10) | 0.0223 (9) | 0.0278 (9) | 0.0021 (8) | 0.0033 (8) | −0.0008 (7) |
C11 | 0.0294 (11) | 0.0216 (10) | 0.0373 (11) | −0.0022 (8) | 0.0050 (9) | 0.0027 (8) |
C12 | 0.0376 (12) | 0.0219 (10) | 0.0272 (10) | 0.0044 (9) | −0.0024 (9) | −0.0031 (8) |
C13 | 0.0516 (14) | 0.0230 (10) | 0.0230 (10) | 0.0044 (9) | 0.0114 (9) | −0.0005 (8) |
C14 | 0.0381 (12) | 0.0209 (9) | 0.0246 (9) | 0.0031 (8) | 0.0100 (8) | 0.0016 (7) |
C15 | 0.0177 (9) | 0.0158 (8) | 0.0177 (8) | 0.0011 (7) | 0.0045 (7) | −0.0003 (6) |
C16 | 0.0219 (9) | 0.0211 (8) | 0.0163 (8) | −0.0013 (7) | 0.0056 (7) | 0.0021 (7) |
C17 | 0.0200 (9) | 0.0234 (9) | 0.0147 (8) | −0.0027 (7) | 0.0067 (7) | −0.0019 (7) |
C18 | 0.0144 (8) | 0.0189 (8) | 0.0166 (8) | 0.0002 (7) | 0.0035 (6) | −0.0010 (6) |
C19 | 0.0177 (9) | 0.0196 (8) | 0.0152 (8) | 0.0023 (7) | 0.0039 (6) | 0.0017 (6) |
C20 | 0.0215 (9) | 0.0198 (8) | 0.0181 (8) | −0.0012 (7) | 0.0098 (7) | −0.0008 (7) |
C21 | 0.0232 (10) | 0.0249 (9) | 0.0221 (9) | 0.0059 (8) | 0.0022 (7) | −0.0018 (7) |
C22 | 0.0265 (11) | 0.0347 (11) | 0.0333 (11) | −0.0057 (9) | 0.0036 (9) | −0.0037 (9) |
C23 | 0.0299 (11) | 0.0181 (9) | 0.0340 (10) | 0.0057 (8) | 0.0134 (9) | 0.0020 (8) |
C24 | 0.0483 (15) | 0.0235 (11) | 0.0517 (14) | 0.0038 (10) | 0.0199 (12) | 0.0103 (10) |
C25 | 0.0324 (12) | 0.0353 (12) | 0.0332 (11) | 0.0149 (10) | 0.0019 (9) | −0.0003 (9) |
C26 | 0.113 (3) | 0.0223 (11) | 0.0298 (12) | −0.0021 (14) | 0.0087 (14) | −0.0038 (9) |
Zn1—Zn1i | 2.9301 (4) | C10—C11 | 1.383 (3) |
Zn1—O1 | 2.0224 (13) | C10—H10 | 0.93 |
Zn1—O2 | 2.0207 (13) | C11—H11 | 0.93 |
Zn1—O4 | 2.0459 (13) | C12—N4 | 1.369 (3) |
Zn1—N1 | 2.0516 (14) | C12—C11 | 1.415 (3) |
O1—C1 | 1.263 (2) | C12—C13 | 1.396 (3) |
O2—C1i | 1.272 (2) | C13—H13 | 0.93 |
O3—Zn1 | 2.0819 (14) | C14—C13 | 1.381 (3) |
O3—C8 | 1.264 (2) | C14—H14 | 0.93 |
O4—C8i | 1.276 (2) | C15—C16 | 1.384 (2) |
O5—C20 | 1.240 (2) | C15—H15 | 0.93 |
O6—H61 | 0.94 (4) | C16—H16 | 0.93 |
O6—H62 | 0.96 (4) | C17—C16 | 1.384 (3) |
N1—C15 | 1.344 (2) | C17—C18 | 1.392 (2) |
N1—C19 | 1.343 (2) | C17—H17 | 0.93 |
N2—C20 | 1.336 (2) | C18—C19 | 1.385 (2) |
N2—C21 | 1.471 (2) | C19—H19 | 0.93 |
N2—C23 | 1.475 (2) | C20—C18 | 1.505 (2) |
N3—H3A | 0.86 | C21—C22 | 1.516 (3) |
N4—C26 | 1.447 (3) | C21—H21A | 0.97 |
N4—H4A | 0.86 | C21—H21B | 0.97 |
C1—O2i | 1.272 (2) | C22—H22A | 0.96 |
C2—C1 | 1.480 (2) | C22—H22B | 0.96 |
C2—C3 | 1.391 (2) | C22—H22C | 0.96 |
C3—H3 | 0.93 | C23—C24 | 1.515 (3) |
C4—C3 | 1.381 (3) | C23—H23A | 0.97 |
C4—C5 | 1.407 (3) | C23—H23B | 0.97 |
C4—H4 | 0.93 | C24—H24A | 0.96 |
C5—N3 | 1.363 (2) | C24—H24B | 0.96 |
C6—C5 | 1.410 (3) | C24—H24C | 0.96 |
C6—H6 | 0.93 | C25—N3 | 1.440 (3) |
C7—C2 | 1.403 (2) | C25—H25A | 0.96 |
C7—C6 | 1.371 (3) | C25—H25B | 0.96 |
C7—H7 | 0.93 | C25—H25C | 0.96 |
C8—O4i | 1.276 (2) | C26—H26A | 0.96 |
C8—C9 | 1.479 (2) | C26—H26B | 0.96 |
C9—C10 | 1.394 (3) | C26—H26C | 0.96 |
C9—C14 | 1.400 (3) | ||
O1—Zn1—Zn1i | 73.77 (4) | C12—C11—H11 | 119.7 |
O1—Zn1—O3 | 86.65 (6) | N4—C12—C11 | 118.8 (2) |
O1—Zn1—O4 | 88.23 (6) | N4—C12—C13 | 122.8 (2) |
O1—Zn1—N1 | 94.78 (5) | C13—C12—C11 | 118.43 (19) |
O2—Zn1—Zn1i | 86.29 (4) | C12—C13—H13 | 119.9 |
O2—Zn1—O1 | 159.63 (5) | C14—C13—C12 | 120.18 (19) |
O2—Zn1—O3 | 90.72 (6) | C14—C13—H13 | 119.9 |
O2—Zn1—O4 | 87.59 (5) | C9—C14—H14 | 119.2 |
O2—Zn1—N1 | 105.52 (5) | C13—C14—C9 | 121.57 (19) |
O3—Zn1—Zn1i | 70.66 (4) | C13—C14—H14 | 119.2 |
O4—Zn1—Zn1i | 89.93 (4) | N1—C15—C16 | 122.34 (16) |
O4—Zn1—O3 | 160.59 (5) | N1—C15—H15 | 118.8 |
O4—Zn1—N1 | 106.76 (6) | C16—C15—H15 | 118.8 |
N1—Zn1—Zn1i | 159.67 (4) | C15—C16—H16 | 120.5 |
N1—Zn1—O3 | 92.33 (6) | C17—C16—C15 | 119.04 (16) |
C1—O1—Zn1 | 135.44 (13) | C17—C16—H16 | 120.5 |
C1i—O2—Zn1 | 119.36 (11) | C16—C17—C18 | 119.00 (16) |
C8—O3—Zn1 | 139.69 (12) | C16—C17—H17 | 120.5 |
C8i—O4—Zn1 | 115.95 (12) | C18—C17—H17 | 120.5 |
H62—O6—H61 | 103 (3) | C17—C18—C20 | 120.11 (15) |
C15—N1—Zn1 | 125.96 (12) | C19—C18—C17 | 118.48 (16) |
C19—N1—Zn1 | 115.38 (11) | C19—C18—C20 | 120.80 (15) |
C19—N1—C15 | 118.45 (15) | N1—C19—C18 | 122.65 (16) |
C20—N2—C21 | 124.58 (15) | N1—C19—H19 | 118.7 |
C20—N2—C23 | 118.32 (16) | C18—C19—H19 | 118.7 |
C21—N2—C23 | 117.04 (16) | O5—C20—N2 | 122.74 (17) |
C5—N3—C25 | 122.12 (17) | O5—C20—C18 | 117.80 (17) |
C5—N3—H3A | 118.9 | N2—C20—C18 | 119.45 (16) |
C25—N3—H3A | 118.9 | N2—C21—C22 | 111.97 (16) |
C12—N4—C26 | 123.4 (2) | N2—C21—H21A | 109.2 |
C12—N4—H4A | 118.3 | N2—C21—H21B | 109.2 |
C26—N4—H4A | 118.3 | C22—C21—H21A | 109.2 |
O1—C1—O2i | 124.19 (17) | C22—C21—H21B | 109.2 |
O1—C1—C2 | 117.03 (15) | H21A—C21—H21B | 107.9 |
O2i—C1—C2 | 118.78 (15) | C21—C22—H22A | 109.5 |
C3—C2—C1 | 122.21 (16) | C21—C22—H22B | 109.5 |
C3—C2—C7 | 118.19 (16) | C21—C22—H22C | 109.5 |
C7—C2—C1 | 119.55 (15) | H22A—C22—H22B | 109.5 |
C2—C3—H3 | 119.5 | H22A—C22—H22C | 109.5 |
C4—C3—C2 | 121.08 (17) | H22B—C22—H22C | 109.5 |
C4—C3—H3 | 119.5 | N2—C23—C24 | 111.91 (16) |
C3—C4—C5 | 120.62 (17) | N2—C23—H23A | 109.2 |
C3—C4—H4 | 119.7 | N2—C23—H23B | 109.2 |
C5—C4—H4 | 119.7 | C24—C23—H23A | 109.2 |
N3—C5—C4 | 121.78 (17) | C24—C23—H23B | 109.2 |
N3—C5—C6 | 119.95 (17) | H23A—C23—H23B | 107.9 |
C4—C5—C6 | 118.26 (17) | C23—C24—H24A | 109.5 |
C5—C6—H6 | 119.9 | C23—C24—H24B | 109.5 |
C7—C6—C5 | 120.25 (17) | C23—C24—H24C | 109.5 |
C7—C6—H6 | 119.9 | H24A—C24—H24B | 109.5 |
C2—C7—H7 | 119.2 | H24A—C24—H24C | 109.5 |
C6—C7—C2 | 121.56 (17) | H24B—C24—H24C | 109.5 |
C6—C7—H7 | 119.2 | N3—C25—H25A | 109.5 |
O3—C8—O4i | 123.76 (17) | N3—C25—H25B | 109.5 |
O3—C8—C9 | 117.69 (16) | N3—C25—H25C | 109.5 |
O4i—C8—C9 | 118.55 (16) | H25A—C25—H25B | 109.5 |
C10—C9—C8 | 121.59 (17) | H25A—C25—H25C | 109.5 |
C10—C9—C14 | 118.31 (18) | H25B—C25—H25C | 109.5 |
C14—C9—C8 | 120.10 (17) | N4—C26—H26A | 109.5 |
C9—C10—H10 | 119.6 | N4—C26—H26B | 109.5 |
C11—C10—C9 | 120.71 (19) | N4—C26—H26C | 109.5 |
C11—C10—H10 | 119.6 | H26A—C26—H26B | 109.5 |
C10—C11—C12 | 120.6 (2) | H26A—C26—H26C | 109.5 |
C10—C11—H11 | 119.7 | H26B—C26—H26C | 109.5 |
Zn1i—Zn1—O1—C1 | −10.58 (16) | C20—N2—C23—C24 | 86.7 (2) |
O2—Zn1—O1—C1 | −22.8 (3) | C21—N2—C23—C24 | −96.1 (2) |
O3—Zn1—O1—C1 | 60.23 (17) | C3—C2—C1—O1 | 175.07 (16) |
O4—Zn1—O1—C1 | −101.03 (17) | C3—C2—C1—O2i | −4.9 (3) |
N1—Zn1—O1—C1 | 152.30 (17) | C7—C2—C1—O1 | −2.3 (2) |
Zn1i—Zn1—O2—C1i | 1.39 (12) | C7—C2—C1—O2i | 177.77 (16) |
O1—Zn1—O2—C1i | 13.1 (2) | C1—C2—C3—C4 | −176.37 (17) |
O3—Zn1—O2—C1i | −69.17 (13) | C7—C2—C3—C4 | 1.0 (3) |
O4—Zn1—O2—C1i | 91.48 (13) | C3—C4—C5—N3 | 177.78 (18) |
N1—Zn1—O2—C1i | −161.79 (12) | C5—C4—C3—C2 | −0.3 (3) |
Zn1i—Zn1—O4—C8i | −0.04 (12) | C3—C4—C5—C6 | −1.3 (3) |
O1—Zn1—O4—C8i | 73.72 (13) | C4—C5—N3—C25 | 5.1 (3) |
O2—Zn1—O4—C8i | −86.33 (13) | C6—C5—N3—C25 | −175.77 (19) |
O3—Zn1—O4—C8i | −1.0 (2) | C7—C6—C5—N3 | −176.90 (18) |
N1—Zn1—O4—C8i | 168.18 (12) | C7—C6—C5—C4 | 2.2 (3) |
Zn1i—Zn1—N1—C15 | −165.91 (10) | C6—C7—C2—C1 | 177.35 (17) |
Zn1i—Zn1—N1—C19 | 8.7 (2) | C6—C7—C2—C3 | −0.1 (3) |
O1—Zn1—N1—C15 | 139.65 (15) | C2—C7—C6—C5 | −1.5 (3) |
O1—Zn1—N1—C19 | −45.76 (13) | O3—C8—C9—C10 | 163.73 (18) |
O2—Zn1—N1—C15 | −42.11 (16) | O3—C8—C9—C14 | −15.5 (3) |
O2—Zn1—N1—C19 | 132.48 (12) | O4i—C8—C9—C10 | −15.9 (3) |
O3—Zn1—N1—C15 | −133.51 (15) | O4i—C8—C9—C14 | 164.81 (18) |
O3—Zn1—N1—C19 | 41.08 (13) | C8—C9—C10—C11 | −175.97 (18) |
O4—Zn1—N1—C15 | 50.06 (15) | C14—C9—C10—C11 | 3.3 (3) |
O4—Zn1—N1—C19 | −135.35 (12) | C8—C9—C14—C13 | 177.63 (19) |
Zn1—O1—C1—O2i | 13.4 (3) | C10—C9—C14—C13 | −1.6 (3) |
Zn1—O1—C1—C2 | −166.52 (12) | C9—C10—C11—C12 | −1.1 (3) |
C8—O3—Zn1—Zn1i | 1.03 (19) | C13—C12—N4—C26 | −0.3 (4) |
C8—O3—Zn1—O1 | −72.9 (2) | C11—C12—N4—C26 | −180.0 (2) |
C8—O3—Zn1—O2 | 86.8 (2) | N4—C12—C11—C10 | 176.8 (2) |
C8—O3—Zn1—O4 | 2.1 (3) | C13—C12—C11—C10 | −2.9 (3) |
C8—O3—Zn1—N1 | −167.6 (2) | N4—C12—C13—C14 | −175.2 (2) |
Zn1—O3—C8—O4i | −1.4 (3) | C11—C12—C13—C14 | 4.5 (3) |
Zn1—O3—C8—C9 | 178.98 (14) | C9—C14—C13—C12 | −2.3 (3) |
Zn1—N1—C15—C16 | 174.78 (13) | N1—C15—C16—C17 | −1.9 (3) |
C19—N1—C15—C16 | 0.3 (3) | C18—C17—C16—C15 | 1.9 (3) |
Zn1—N1—C19—C18 | −173.78 (14) | C16—C17—C18—C19 | −0.4 (3) |
C15—N1—C19—C18 | 1.2 (3) | C16—C17—C18—C20 | −171.52 (17) |
C21—N2—C20—O5 | −176.81 (17) | C17—C18—C19—N1 | −1.2 (3) |
C21—N2—C20—C18 | 3.5 (3) | C20—C18—C19—N1 | 169.86 (16) |
C23—N2—C20—O5 | 0.2 (3) | O5—C20—C18—C17 | 67.7 (2) |
C23—N2—C20—C18 | −179.51 (15) | O5—C20—C18—C19 | −103.2 (2) |
C20—N2—C21—C22 | 97.4 (2) | N2—C20—C18—C17 | −112.63 (19) |
C23—N2—C21—C22 | −79.6 (2) | N2—C20—C18—C19 | 76.5 (2) |
Symmetry code: (i) −x, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O6ii | 0.86 | 2.50 | 3.105 (3) | 128 |
N4—H4A···O6iii | 0.86 | 2.07 | 2.922 (3) | 171 |
O6—H61···O4iv | 0.93 (4) | 2.07 (4) | 2.875 (2) | 143 (3) |
O6—H61···O2iv | 0.93 (4) | 2.37 (4) | 3.117 (2) | 137 (3) |
O6—H62···O5v | 0.96 (4) | 1.81 (4) | 2.741 (2) | 162 (3) |
Symmetry codes: (ii) x−2, y, z−1; (iii) x−1/2, −y+1/2, z−1/2; (iv) −x+1, −y, −z+1; (v) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn2(C8H8NO2)4(C10H14N2O)2]·2H2O |
Mr | 1123.89 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 10.1384 (2), 25.6931 (3), 10.5170 (4) |
β (°) | 103.061 (2) |
V (Å3) | 2668.67 (12) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.97 |
Crystal size (mm) | 0.52 × 0.52 × 0.10 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.609, 0.905 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23512, 6638, 5562 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.086, 1.02 |
No. of reflections | 6638 |
No. of parameters | 346 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.74, −0.54 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O6i | 0.86 | 2.50 | 3.105 (3) | 128 |
N4—H4A···O6ii | 0.86 | 2.07 | 2.922 (3) | 171 |
O6—H61···O4iii | 0.93 (4) | 2.07 (4) | 2.875 (2) | 143 (3) |
O6—H61···O2iii | 0.93 (4) | 2.37 (4) | 3.117 (2) | 137 (3) |
O6—H62···O5iv | 0.96 (4) | 1.81 (4) | 2.741 (2) | 162 (3) |
Symmetry codes: (i) x−2, y, z−1; (ii) x−1/2, −y+1/2, z−1/2; (iii) −x+1, −y, −z+1; (iv) x+1, y, z. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer.
References
Bigoli, F., Braibanti, A., Pellinghelli, M. A. & Tiripicchio, A. (1972). Acta Cryst. B28, 962–966. CSD CrossRef CAS IUCr Journals Web of Science Google Scholar
Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Hökelek, T., Necefoğlu, H. & Balcı, M. (1995). Acta Cryst. C51, 2020–2023. CSD CrossRef Web of Science IUCr Journals Google Scholar
Hökelek, T., Yılmaz, F., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009). Acta Cryst. E65, m955–m956. Web of Science CSD CrossRef IUCr Journals Google Scholar
Krishnamachari, K. A. V. R. (1974). Am. J. Clin. Nutr. 27, 108–111. CAS PubMed Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Speier, G. & Fulop, V. (1989). J. Chem. Soc. Dalton Trans. pp. 2331–2333. CSD CrossRef Web of Science Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Usubaliev, B. T., Movsumov, E. M., Musaev, F. N., Nadzhafov, G. N., Amiraslanov, I. R. & Mamedov, Kh. S. (1980). Koord. Khim. 6, 1091–1096. CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
The title compound is a binuclear compound, consisting of two DENA and four methylaminobenzoate (MAB) ligands. The crystal structures of similar complexes of Cu2+ and Zn2+ ions, [Cu(C6H5COO)2(C5H5N)]2 (Usubaliev et al., 1980), [Cu(C6H5CO2)2(py)]2 (Speier & Fulop, 1989), [Cu2(C6H5COO)4(C10H14N2O)2] (Hökelek et al., 1995) and [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009) have also been reported. In these structures, the benzoate ion acts as a bidentate ligand.
The title dimeric complex, [Zn2(MAB)4(DENA)2].H2O, has a centre of symmetry and the two ZnII ions are surrounded by four MAB groups and two DENA ligands. The DENA ligands are coordinated to ZnII ions through pyridine N atoms only. The MAB groups act as bridging ligands. The Zn···Zn' distance is 2.9301 (4) Å. The average Zn—O distance is 2.0297 (13) Å (Table 1), and four O atoms of the bridging MAB ligands around each ZnII ion form a distorted square plane. The ZnII ion lies 0.3519 (2) Å below the least-squares plane. The average O—Zn—O bond angle is 88.30 (6)°. A distorted square-pyramidal arrangement around each ZnII ion is completed by the pyridine N atom of DENA ligand at 2.0516 (14) Å (Table 1) from the Zn atom. The N1—Zn1···Zn1' angle is 159.67 (4)° and the dihedral angle between plane through atoms Zn1, O1, O2, C1, Zn1', O1', O2'and C1' and the plane through Zn1, O3, O4, C8, Zn1', O3', O4', and C8' atoms is 89.00 (7)°. The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2—C7) and B (C9—C14) are 10.57 (10)° and 16.63 (12)°, respectively, while that between rings A and B is A/B = 81.84 (5)°. Ring C (N1/C15-C19) is oriented with respect to rings A and B at dihedral angles A/C = 40.49 (6) and B/C = 51.25 (6) °.
In the crystal structure, intermolecular O—H···O and N—H···O interactions (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The π–π contact between the pyridine rings, Cg1—Cg1i, [symmetry code (i): 2 - x, -y, 1 - z, where Cg1 is centroid of the ring C (N1/C15—C19)] may further stabilize the structure, with centroid-centroid distance of 3.633 (1) Å.