organic compounds
Ethyl 4-(3-hydroxyphenyl)-2,7,7-trimethyl-5-oxo-1,4,5,6,7,8-hexahydroquinoline-3-carboxylate
aDepartment of Physics, Thiagarajar College, Madurai 625 009, India, bOrganic Chemistry Division, School of Science, VIT University, Vellore 632 014, India, cMaterials Research Centre, Indian Institute of Science, Bangalore 560 012, India, and dOrganic Chemistry Division, School of Science, VIT University, Vellore 632 014, India
*Correspondence e-mail: vasan692000@yahoo.co.in
In the molecular structure of the title compound, C21H25NO4, the dihydropyridine ring adopts a flattened boat conformation while the cyclohexenone ring is in an In the molecules are linked into a two-dimensional network parallel to (10) by N—H⋯O and O—H⋯O hydrogen bonds. The network is generated by R44(30) and R44(34) graph-set motifs.
Related literature
For general background to oxoquinoline derivatives, see: Baba (1997); Baba et al. (1997,1998); Koga et al. (1980); Qi et al. (2007). For a related structure, see: Czaun et al. (2002); For graph-set motifs, see: Etter et al. (1990).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536809039877/ci2916sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809039877/ci2916Isup2.hkl
A 50 ml round-bottomed flask was charged with 3-hydroxybenzaldehyde (1.221 g, 10 mmol), 5,5-dimethyl-1,3-cyclohexanedione (1.402 g, 10 mmol), ethyl acetoacetate (1.265 ml, 10 mmol) and ammonium acetate (0.771 g, 10 mmol) followed by ethanol (10 ml). The mixture was stirred at 343 K for 1.5 h and left aside for a day. The solid separated out was filtered and washed with ethanol-diethyl ether mixture (1:4). It was recrystalyzed from 100% chloroform. Light yellow prismatic crystals of the title compound were obtained by slow evaporation of a methonolic solution. Pale yellow crystals with slab morphology were obtained by slow evaporation of a methonol-chloroform solution.
H atoms were positioned geometrically [O-H = 0.82 Å, N-H = 0.86 Å and C-H = 0.93–0.98 Å] and refined using a riding model with Uiso(H) = 1.2Ueq(C) and 1.2Ueq(O and Cmethyl).
Some oxoquinoline derivatives viz. 8-difluoromethoxy-1-ethyl-6-fluoro-1,4-dihydro-7-[4-(2-methoxyphenyl)- 1-πiperazinyl]- 4-oxoquinoline-3-carboxylic acid (K-12), 7-(3,4-dehydro-4-phenyl-1-piperidinyl)-1,4-dihydro-6-fluoro-1-methyl- 8-trifluoromethyl-4-oxoquinoline-3-carboxylic acid (K-37), 8-difluoromethoxy-1,4-dihydro-6-fluoro-7-(3,4-dehydro-4-phenyl- 1-piperidinyl)-1-[4,(1,2,4-triazol-1-yl)methylphenyl]-4-oxoquinoline- 3-carboxylic acid (K-38) act as potent and selective inhibitor of human immunodeficiency virus type I (HIV-1) transcription (Baba, 1997; Baba et al., 1997,1998). Structure-activity relationships of antibacterial oxoquinolone-3-carboxylic acids have been studied (Koga et al., 1980). In view of the signficicant biological activitiy, precise single determinations of these derivatives are expcted to provide insights in their design and function. The of 1H-2-phenyl-3-hydroxy-4-oxoquinoline-dimethylsulfoxide has already been reported (Czaun et al., 2002). The expression, purification and crystallization of 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase are reported elsewhere (Qi et al., 2007).
The dihydropyridine ring of the title molecule (Fig.1) adopts a flattened boat conformation. The cyclohexenone ring is in an
with atom C4 at the flap. The 4-methoxyphenyl ring and the planar part of the dihydropyridine ring (C2/C7/C9/C10) are nearly perpendicular to each other, with a dihedral angle of 89.37 (6)°.In the 1) by N—H···O and O—H···O hydrogen bonds (Table 1). The two-deimensional layer, resembiling a corrugated sheet, contains R44(30) and R44(34) graph-set motifs (Etter et al., 1990) as its fundamental repeating units. It is observed that these rings are assembled through centrosymmetrically related pairs of molecules with no direct hydrogen bonding between them.
molecules are linked into a two-dimensional network (Fig.2) parallel to the (10For general background to oxoquinoline derivatives, see: Baba (1997); Baba et al. (1997,1998); Koga et al. (1980); Qi et al. (2007). For a related structure, see: Czaun et al. (2002); For graph-set motifs, see: Etter et al. (1990).
Data collection: APEX2 (Bruker, 2004); cell
SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C21H25NO4 | F(000) = 760 |
Mr = 355.42 | Dx = 1.236 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 5123 reflections |
a = 10.8721 (4) Å | θ = 2.0–30.0° |
b = 16.1255 (7) Å | µ = 0.09 mm−1 |
c = 11.0856 (4) Å | T = 296 K |
β = 100.682 (2)° | Prism, yellow |
V = 1909.83 (13) Å3 | 0.26 × 0.15 × 0.12 mm |
Z = 4 |
Bruker Kappa APEXII area-detector diffractometer | 3163 independent reflections |
Radiation source: fine-focus sealed tube | 2137 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.041 |
ω and φ scans | θmax = 24.5°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | h = −12→12 |
Tmin = 0.93, Tmax = 0.95 | k = −18→17 |
14667 measured reflections | l = −11→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.115 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.048P)2 + 0.4479P] where P = (Fo2 + 2Fc2)/3 |
3163 reflections | (Δ/σ)max = 0.001 |
236 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.15 e Å−3 |
C21H25NO4 | V = 1909.83 (13) Å3 |
Mr = 355.42 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 10.8721 (4) Å | µ = 0.09 mm−1 |
b = 16.1255 (7) Å | T = 296 K |
c = 11.0856 (4) Å | 0.26 × 0.15 × 0.12 mm |
β = 100.682 (2)° |
Bruker Kappa APEXII area-detector diffractometer | 3163 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | 2137 reflections with I > 2σ(I) |
Tmin = 0.93, Tmax = 0.95 | Rint = 0.041 |
14667 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.115 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.15 e Å−3 |
3163 reflections | Δρmin = −0.15 e Å−3 |
236 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O9A | 1.01275 (14) | 0.04777 (9) | 0.71484 (12) | 0.0559 (4) | |
O6A | 1.21908 (13) | 0.29658 (10) | 0.59297 (11) | 0.0577 (4) | |
O9B | 0.84079 (15) | −0.01070 (9) | 0.60571 (13) | 0.0618 (4) | |
O8C | 0.72595 (19) | 0.37790 (12) | 0.71929 (17) | 0.0969 (7) | |
H8C | 0.7098 | 0.4009 | 0.7804 | 0.145* | |
N1 | 0.85621 (15) | 0.18610 (10) | 0.34959 (13) | 0.0444 (4) | |
H1 | 0.7990 | 0.1933 | 0.2857 | 0.053* | |
C7 | 1.03735 (16) | 0.23880 (11) | 0.47694 (14) | 0.0346 (4) | |
C2 | 0.95697 (17) | 0.23874 (11) | 0.36798 (15) | 0.0365 (4) | |
C8 | 1.01637 (17) | 0.18488 (12) | 0.58296 (15) | 0.0376 (5) | |
H8 | 1.0962 | 0.1583 | 0.6176 | 0.045* | |
C9 | 0.92188 (17) | 0.11633 (11) | 0.53752 (15) | 0.0368 (4) | |
C6 | 1.14473 (17) | 0.29327 (12) | 0.49410 (15) | 0.0394 (5) | |
C10 | 0.84203 (17) | 0.12208 (12) | 0.42851 (15) | 0.0384 (5) | |
C9A | 0.91749 (19) | 0.04511 (13) | 0.61867 (17) | 0.0433 (5) | |
C4 | 1.04698 (18) | 0.37054 (12) | 0.29899 (16) | 0.0435 (5) | |
C8B | 0.8704 (2) | 0.28573 (13) | 0.65967 (17) | 0.0509 (6) | |
H8B | 0.8260 | 0.2893 | 0.5796 | 0.061* | |
C3 | 0.97318 (19) | 0.29188 (13) | 0.26167 (15) | 0.0471 (5) | |
H3A | 0.8913 | 0.3068 | 0.2159 | 0.057* | |
H3B | 1.0157 | 0.2600 | 0.2075 | 0.057* | |
C5 | 1.16617 (19) | 0.34564 (14) | 0.38772 (17) | 0.0537 (6) | |
H5A | 1.2199 | 0.3154 | 0.3424 | 0.064* | |
H5B | 1.2103 | 0.3956 | 0.4196 | 0.064* | |
C8A | 0.97467 (19) | 0.23549 (12) | 0.68484 (15) | 0.0421 (5) | |
C10A | 0.7372 (2) | 0.06394 (14) | 0.37939 (18) | 0.0536 (6) | |
H10A | 0.7707 | 0.0101 | 0.3675 | 0.080* | |
H10B | 0.6924 | 0.0845 | 0.3024 | 0.080* | |
H10C | 0.6813 | 0.0600 | 0.4368 | 0.080* | |
C8F | 1.0398 (2) | 0.23138 (15) | 0.80510 (17) | 0.0608 (6) | |
H8F | 1.1111 | 0.1986 | 0.8241 | 0.073* | |
C8C | 0.8307 (2) | 0.33082 (14) | 0.7515 (2) | 0.0608 (6) | |
C9B | 1.0157 (2) | −0.01484 (16) | 0.8081 (2) | 0.0682 (7) | |
H91B | 1.0250 | −0.0694 | 0.7740 | 0.082* | |
H92B | 0.9384 | −0.0139 | 0.8400 | 0.082* | |
C4A | 1.0813 (2) | 0.41285 (15) | 0.18658 (18) | 0.0673 (7) | |
H41A | 1.1279 | 0.4625 | 0.2115 | 0.101* | |
H42A | 1.0063 | 0.4268 | 0.1298 | 0.101* | |
H43A | 1.1313 | 0.3759 | 0.1477 | 0.101* | |
C8E | 0.9988 (3) | 0.27565 (18) | 0.8960 (2) | 0.0777 (8) | |
H8E | 1.0422 | 0.2714 | 0.9763 | 0.093* | |
C8D | 0.8956 (3) | 0.32578 (17) | 0.8710 (2) | 0.0717 (8) | |
H8D | 0.8697 | 0.3559 | 0.9333 | 0.086* | |
C4B | 0.9704 (3) | 0.43009 (15) | 0.3613 (2) | 0.0796 (8) | |
H41B | 1.0181 | 0.4796 | 0.3844 | 0.119* | |
H42B | 0.9502 | 0.4043 | 0.4332 | 0.119* | |
H43B | 0.8947 | 0.4440 | 0.3056 | 0.119* | |
C9C | 1.1234 (3) | 0.0034 (2) | 0.9074 (2) | 0.0993 (11) | |
H91C | 1.1276 | −0.0374 | 0.9710 | 0.149* | |
H92C | 1.1130 | 0.0574 | 0.9407 | 0.149* | |
H93C | 1.1993 | 0.0022 | 0.8749 | 0.149* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O9A | 0.0679 (10) | 0.0550 (9) | 0.0430 (7) | 0.0030 (7) | 0.0057 (7) | 0.0178 (7) |
O6A | 0.0501 (9) | 0.0749 (11) | 0.0390 (7) | −0.0106 (8) | −0.0157 (7) | 0.0038 (7) |
O9B | 0.0681 (11) | 0.0521 (10) | 0.0667 (10) | −0.0076 (8) | 0.0164 (8) | 0.0124 (8) |
O8C | 0.1049 (15) | 0.1028 (16) | 0.0858 (13) | 0.0344 (13) | 0.0246 (11) | −0.0337 (11) |
N1 | 0.0460 (10) | 0.0493 (10) | 0.0313 (8) | −0.0099 (8) | −0.0099 (7) | 0.0028 (8) |
C7 | 0.0365 (10) | 0.0380 (11) | 0.0272 (9) | 0.0017 (8) | 0.0006 (7) | −0.0014 (8) |
C2 | 0.0402 (11) | 0.0380 (11) | 0.0286 (9) | −0.0024 (9) | −0.0005 (8) | −0.0028 (8) |
C8 | 0.0390 (11) | 0.0427 (11) | 0.0282 (9) | 0.0027 (9) | −0.0011 (8) | 0.0036 (8) |
C9 | 0.0438 (11) | 0.0356 (11) | 0.0325 (9) | 0.0021 (9) | 0.0107 (8) | −0.0012 (8) |
C6 | 0.0375 (11) | 0.0456 (12) | 0.0312 (9) | 0.0008 (9) | −0.0034 (8) | −0.0018 (9) |
C10 | 0.0438 (11) | 0.0374 (11) | 0.0338 (9) | −0.0024 (9) | 0.0068 (8) | −0.0046 (9) |
C9A | 0.0479 (12) | 0.0432 (12) | 0.0418 (11) | 0.0067 (10) | 0.0160 (10) | 0.0002 (9) |
C4 | 0.0519 (12) | 0.0440 (12) | 0.0312 (9) | −0.0051 (10) | −0.0009 (9) | 0.0020 (9) |
C8B | 0.0619 (14) | 0.0548 (14) | 0.0351 (10) | 0.0008 (11) | 0.0063 (10) | −0.0091 (10) |
C3 | 0.0542 (13) | 0.0540 (13) | 0.0282 (9) | −0.0119 (10) | −0.0052 (9) | 0.0032 (9) |
C5 | 0.0508 (13) | 0.0627 (14) | 0.0429 (11) | −0.0151 (11) | −0.0037 (10) | 0.0060 (10) |
C8A | 0.0538 (13) | 0.0429 (12) | 0.0285 (9) | −0.0071 (10) | 0.0046 (8) | −0.0019 (8) |
C10A | 0.0579 (14) | 0.0541 (14) | 0.0472 (11) | −0.0153 (11) | 0.0058 (10) | −0.0075 (10) |
C8F | 0.0772 (16) | 0.0680 (15) | 0.0326 (11) | −0.0053 (13) | −0.0016 (10) | −0.0034 (11) |
C8C | 0.0738 (16) | 0.0540 (15) | 0.0586 (14) | −0.0031 (13) | 0.0229 (12) | −0.0155 (12) |
C9B | 0.0835 (18) | 0.0674 (16) | 0.0571 (13) | 0.0206 (13) | 0.0220 (13) | 0.0296 (12) |
C4A | 0.0850 (18) | 0.0689 (16) | 0.0438 (12) | −0.0258 (14) | 0.0008 (11) | 0.0110 (11) |
C8E | 0.109 (2) | 0.089 (2) | 0.0303 (11) | −0.0111 (18) | 0.0015 (13) | −0.0135 (12) |
C8D | 0.101 (2) | 0.0724 (18) | 0.0468 (13) | −0.0194 (16) | 0.0261 (14) | −0.0260 (13) |
C4B | 0.117 (2) | 0.0556 (16) | 0.0675 (15) | 0.0266 (15) | 0.0204 (15) | 0.0067 (13) |
C9C | 0.0805 (19) | 0.148 (3) | 0.0679 (16) | 0.0255 (19) | 0.0092 (15) | 0.0560 (19) |
O9A—C9A | 1.342 (2) | C3—H3A | 0.97 |
O9A—C9B | 1.442 (2) | C3—H3B | 0.97 |
O6A—C6 | 1.237 (2) | C5—H5A | 0.97 |
O9B—C9A | 1.217 (2) | C5—H5B | 0.97 |
O8C—C8C | 1.361 (3) | C8A—C8F | 1.390 (3) |
O8C—H8C | 0.82 | C10A—H10A | 0.96 |
N1—C2 | 1.371 (2) | C10A—H10B | 0.96 |
N1—C10 | 1.380 (2) | C10A—H10C | 0.96 |
N1—H1 | 0.86 | C8F—C8E | 1.374 (3) |
C7—C2 | 1.353 (2) | C8F—H8F | 0.93 |
C7—C6 | 1.445 (3) | C8C—C8D | 1.383 (3) |
C7—C8 | 1.513 (2) | C9B—C9C | 1.480 (3) |
C2—C3 | 1.494 (3) | C9B—H91B | 0.97 |
C8—C9 | 1.529 (3) | C9B—H92B | 0.97 |
C8—C8A | 1.529 (3) | C4A—H41A | 0.96 |
C8—H8 | 0.98 | C4A—H42A | 0.96 |
C9—C10 | 1.354 (2) | C4A—H43A | 0.96 |
C9—C9A | 1.465 (3) | C8E—C8D | 1.369 (4) |
C6—C5 | 1.503 (3) | C8E—H8E | 0.93 |
C10—C10A | 1.498 (3) | C8D—H8D | 0.93 |
C4—C3 | 1.517 (3) | C4B—H41B | 0.96 |
C4—C4B | 1.518 (3) | C4B—H42B | 0.96 |
C4—C4A | 1.526 (3) | C4B—H43B | 0.96 |
C4—C5 | 1.528 (3) | C9C—H91C | 0.96 |
C8B—C8A | 1.379 (3) | C9C—H92C | 0.96 |
C8B—C8C | 1.383 (3) | C9C—H93C | 0.96 |
C8B—H8B | 0.93 | ||
C9A—O9A—C9B | 117.31 (17) | C4—C5—H5B | 108.6 |
C8C—O8C—H8C | 109.5 | H5A—C5—H5B | 107.6 |
C2—N1—C10 | 123.30 (14) | C8B—C8A—C8F | 118.38 (19) |
C2—N1—H1 | 118.4 | C8B—C8A—C8 | 120.62 (15) |
C10—N1—H1 | 118.4 | C8F—C8A—C8 | 120.99 (19) |
C2—C7—C6 | 119.35 (16) | C10—C10A—H10A | 109.5 |
C2—C7—C8 | 121.84 (17) | C10—C10A—H10B | 109.5 |
C6—C7—C8 | 118.79 (14) | H10A—C10A—H10B | 109.5 |
C7—C2—N1 | 119.95 (17) | C10—C10A—H10C | 109.5 |
C7—C2—C3 | 123.56 (17) | H10A—C10A—H10C | 109.5 |
N1—C2—C3 | 116.47 (14) | H10B—C10A—H10C | 109.5 |
C7—C8—C9 | 110.38 (14) | C8E—C8F—C8A | 120.1 (2) |
C7—C8—C8A | 112.04 (15) | C8E—C8F—H8F | 120.0 |
C9—C8—C8A | 110.86 (15) | C8A—C8F—H8F | 120.0 |
C7—C8—H8 | 107.8 | O8C—C8C—C8B | 117.4 (2) |
C9—C8—H8 | 107.8 | O8C—C8C—C8D | 122.5 (2) |
C8A—C8—H8 | 107.8 | C8B—C8C—C8D | 120.1 (2) |
C10—C9—C9A | 120.87 (17) | O9A—C9B—C9C | 107.7 (2) |
C10—C9—C8 | 121.66 (16) | O9A—C9B—H91B | 110.2 |
C9A—C9—C8 | 117.43 (15) | C9C—C9B—H91B | 110.2 |
O6A—C6—C7 | 121.49 (17) | O9A—C9B—H92B | 110.2 |
O6A—C6—C5 | 120.01 (17) | C9C—C9B—H92B | 110.2 |
C7—C6—C5 | 118.50 (14) | H91B—C9B—H92B | 108.5 |
C9—C10—N1 | 119.23 (16) | C4—C4A—H41A | 109.5 |
C9—C10—C10A | 126.89 (18) | C4—C4A—H42A | 109.5 |
N1—C10—C10A | 113.86 (15) | H41A—C4A—H42A | 109.5 |
O9B—C9A—O9A | 121.89 (18) | C4—C4A—H43A | 109.5 |
O9B—C9A—C9 | 127.35 (18) | H41A—C4A—H43A | 109.5 |
O9A—C9A—C9 | 110.76 (17) | H42A—C4A—H43A | 109.5 |
C3—C4—C4B | 110.26 (19) | C8D—C8E—C8F | 121.6 (2) |
C3—C4—C4A | 110.37 (15) | C8D—C8E—H8E | 119.2 |
C4B—C4—C4A | 109.04 (18) | C8F—C8E—H8E | 119.2 |
C3—C4—C5 | 107.36 (16) | C8E—C8D—C8C | 118.8 (2) |
C4B—C4—C5 | 110.14 (17) | C8E—C8D—H8D | 120.6 |
C4A—C4—C5 | 109.66 (17) | C8C—C8D—H8D | 120.6 |
C8A—C8B—C8C | 121.09 (19) | C4—C4B—H41B | 109.5 |
C8A—C8B—H8B | 119.5 | C4—C4B—H42B | 109.5 |
C8C—C8B—H8B | 119.5 | H41B—C4B—H42B | 109.5 |
C2—C3—C4 | 113.47 (14) | C4—C4B—H43B | 109.5 |
C2—C3—H3A | 108.9 | H41B—C4B—H43B | 109.5 |
C4—C3—H3A | 108.9 | H42B—C4B—H43B | 109.5 |
C2—C3—H3B | 108.9 | C9B—C9C—H91C | 109.5 |
C4—C3—H3B | 108.9 | C9B—C9C—H92C | 109.5 |
H3A—C3—H3B | 107.7 | H91C—C9C—H92C | 109.5 |
C6—C5—C4 | 114.60 (16) | C9B—C9C—H93C | 109.5 |
C6—C5—H5A | 108.6 | H91C—C9C—H93C | 109.5 |
C4—C5—H5A | 108.6 | H92C—C9C—H93C | 109.5 |
C6—C5—H5B | 108.6 | ||
C6—C7—C2—N1 | 178.61 (17) | C10—C9—C9A—O9A | 173.47 (17) |
C8—C7—C2—N1 | −3.0 (3) | C8—C9—C9A—O9A | −8.8 (2) |
C6—C7—C2—C3 | 0.7 (3) | C7—C2—C3—C4 | −26.3 (3) |
C8—C7—C2—C3 | 179.07 (17) | N1—C2—C3—C4 | 155.73 (17) |
C10—N1—C2—C7 | −11.5 (3) | C4B—C4—C3—C2 | −70.4 (2) |
C10—N1—C2—C3 | 166.61 (17) | C4A—C4—C3—C2 | 169.08 (18) |
C2—C7—C8—C9 | 17.0 (2) | C5—C4—C3—C2 | 49.6 (2) |
C6—C7—C8—C9 | −164.56 (16) | O6A—C6—C5—C4 | −150.90 (19) |
C2—C7—C8—C8A | −107.0 (2) | C7—C6—C5—C4 | 30.1 (3) |
C6—C7—C8—C8A | 71.4 (2) | C3—C4—C5—C6 | −52.3 (2) |
C7—C8—C9—C10 | −19.7 (2) | C4B—C4—C5—C6 | 67.8 (2) |
C8A—C8—C9—C10 | 105.08 (19) | C4A—C4—C5—C6 | −172.20 (18) |
C7—C8—C9—C9A | 162.58 (16) | C8C—C8B—C8A—C8F | −0.2 (3) |
C8A—C8—C9—C9A | −72.7 (2) | C8C—C8B—C8A—C8 | 179.03 (19) |
C2—C7—C6—O6A | 178.46 (18) | C7—C8—C8A—C8B | 55.7 (2) |
C8—C7—C6—O6A | 0.0 (3) | C9—C8—C8A—C8B | −68.1 (2) |
C2—C7—C6—C5 | −2.5 (3) | C7—C8—C8A—C8F | −125.0 (2) |
C8—C7—C6—C5 | 179.01 (17) | C9—C8—C8A—C8F | 111.2 (2) |
C9A—C9—C10—N1 | −174.18 (17) | C8B—C8A—C8F—C8E | 1.0 (3) |
C8—C9—C10—N1 | 8.1 (3) | C8—C8A—C8F—C8E | −178.3 (2) |
C9A—C9—C10—C10A | 4.3 (3) | C8A—C8B—C8C—O8C | −179.0 (2) |
C8—C9—C10—C10A | −173.38 (18) | C8A—C8B—C8C—C8D | −0.2 (4) |
C2—N1—C10—C9 | 8.7 (3) | C9A—O9A—C9B—C9C | −176.61 (19) |
C2—N1—C10—C10A | −169.93 (18) | C8A—C8F—C8E—C8D | −1.3 (4) |
C9B—O9A—C9A—O9B | −4.7 (3) | C8F—C8E—C8D—C8C | 0.8 (4) |
C9B—O9A—C9A—C9 | 175.31 (17) | O8C—C8C—C8D—C8E | 178.7 (2) |
C10—C9—C9A—O9B | −6.5 (3) | C8B—C8C—C8D—C8E | 0.0 (4) |
C8—C9—C9A—O9B | 171.30 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
O8C—H8C···O9Bi | 0.82 | 2.05 | 2.835 (2) | 162 |
N1—H1···O6Aii | 0.86 | 2.16 | 2.970 (2) | 157 |
Symmetry codes: (i) −x+3/2, y+1/2, −z+3/2; (ii) x−1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C21H25NO4 |
Mr | 355.42 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 10.8721 (4), 16.1255 (7), 11.0856 (4) |
β (°) | 100.682 (2) |
V (Å3) | 1909.83 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.26 × 0.15 × 0.12 |
Data collection | |
Diffractometer | Bruker Kappa APEXII area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2004) |
Tmin, Tmax | 0.93, 0.95 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14667, 3163, 2137 |
Rint | 0.041 |
(sin θ/λ)max (Å−1) | 0.583 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.115, 1.02 |
No. of reflections | 3163 |
No. of parameters | 236 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.15 |
Computer programs: APEX2 (Bruker, 2004), SAINT-Plus (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O8C—H8C···O9Bi | 0.82 | 2.05 | 2.835 (2) | 162 |
N1—H1···O6Aii | 0.86 | 2.16 | 2.970 (2) | 157 |
Symmetry codes: (i) −x+3/2, y+1/2, −z+3/2; (ii) x−1/2, −y+1/2, z−1/2. |
References
Baba, M. (1997). Antivir. Res. 33, 141–152. CrossRef CAS PubMed Web of Science Google Scholar
Baba, M., Okamoto, M., Kawamura, M., Makino, M., Higashida, T., Takashi, T., Kimura, Y., Ikeuchi, T., Tetsuka, T. & Okamoto, T. (1998). Mol. Pharm. 53, 1097–1103. CAS Google Scholar
Baba, M., Okamoto, M., Makino, M., Kimura, Y., Ikeuchi, T., Sakaguchi, T. & Okamoto, T. (1997). Antimicrob. Agents Chemother. 41, 1250–1255. CAS PubMed Web of Science Google Scholar
Bruker (2004). APEX2 and SAINT-Plus. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Czaun, M., Ganszky, I., Speier, G. & Parkanyi, L. (2002). Z. Kristallogr. New Cryst. Struct. 217, 379–380. CAS Google Scholar
Etter, M. C., MacDonald, J. C. & Bernstein, J. (1990). Acta Cryst. B46, 256–262. CrossRef CAS Web of Science IUCr Journals Google Scholar
Koga, H., Itoh, A., murayama, S., Suzue, S. & Irikura, T. (1980). J. Med. Chem. 23, 1358–1363. CrossRef CAS PubMed Web of Science Google Scholar
Qi, R., Fetzner, S. & Oakley, A. J. (2007). Acta Cryst. F63, 378–381. CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2004). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Some oxoquinoline derivatives viz. 8-difluoromethoxy-1-ethyl-6-fluoro-1,4-dihydro-7-[4-(2-methoxyphenyl)- 1-πiperazinyl]- 4-oxoquinoline-3-carboxylic acid (K-12), 7-(3,4-dehydro-4-phenyl-1-piperidinyl)-1,4-dihydro-6-fluoro-1-methyl- 8-trifluoromethyl-4-oxoquinoline-3-carboxylic acid (K-37), 8-difluoromethoxy-1,4-dihydro-6-fluoro-7-(3,4-dehydro-4-phenyl- 1-piperidinyl)-1-[4,(1,2,4-triazol-1-yl)methylphenyl]-4-oxoquinoline- 3-carboxylic acid (K-38) act as potent and selective inhibitor of human immunodeficiency virus type I (HIV-1) transcription (Baba, 1997; Baba et al., 1997,1998). Structure-activity relationships of antibacterial oxoquinolone-3-carboxylic acids have been studied (Koga et al., 1980). In view of the signficicant biological activitiy, precise single crystal structure determinations of these derivatives are expcted to provide insights in their design and function. The crystal structure of 1H-2-phenyl-3-hydroxy-4-oxoquinoline-dimethylsulfoxide has already been reported (Czaun et al., 2002). The expression, purification and crystallization of 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase are reported elsewhere (Qi et al., 2007).
The dihydropyridine ring of the title molecule (Fig.1) adopts a flattened boat conformation. The cyclohexenone ring is in an envelope conformation with atom C4 at the flap. The 4-methoxyphenyl ring and the planar part of the dihydropyridine ring (C2/C7/C9/C10) are nearly perpendicular to each other, with a dihedral angle of 89.37 (6)°.
In the crystal structure, molecules are linked into a two-dimensional network (Fig.2) parallel to the (101) by N—H···O and O—H···O hydrogen bonds (Table 1). The two-deimensional layer, resembiling a corrugated sheet, contains R44(30) and R44(34) graph-set motifs (Etter et al., 1990) as its fundamental repeating units. It is observed that these rings are assembled through centrosymmetrically related pairs of molecules with no direct hydrogen bonding between them.