organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

(5R)-Ethyl 6-benzyl-8,8-di­methyl-7,9-dioxo-1-oxa-2,6-di­aza­spiro­[4.4]non-2-ene-3-carboxyl­ate

aInstitute of Science, Universiti Teknologi MARA, 40450 Shah Alam, Selangor, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my

(Received 15 October 2009; accepted 15 October 2009; online 28 October 2009)

In the title compound, C18H20N2O5, the pyrrolidine ring adopts an envelope conformation with the C atom bonded to the methyl groups as the flap. The dihydro­isoxazole ring is essentially planar (r.m.s. deviation = 0.041 Å) and forms a dihedral angle of 65.19 (6)° with the phenyl ring. In the crystal, neighbouring mol­ecules are linked into chains along [110] by inter­molecular C—H⋯O hydrogen bonds and weak C—H⋯π inter­actions involving the phenyl ring.

Related literature

For general background and applications of the title compound, see: Carmely et al. (1990[Carmely, S., Gebreyesus, T., Kashman, Y., Skelton, B. W., White, A. H. & Yosief, T. (1990). Aust. J. Chem. 43, 1881-1888.]); Manero et al. (2006[Manero, F., Sauleau, P., Juin, P., Vallette, F. M. & Bourguet-Kondracki, M.-L. (2006). Electron. J. Nat. Substances, SI 1, 46.]); Sauleau & Bourguet-Kondracki (2005[Sauleau, P. & Bourguet-Kondracki, M.-L. (2005). Steroids, 70, 954-959.]). For a related structure, see: Hamzah et al. (2006[Hamzah, A. S., Shaameri, Z. & Yamin, B. M. (2006). Acta Cryst. E62, o1795-o1797.]). For ring conformations and ring puckering analysis, see: Boeyens (1978[Boeyens, J. C. A. (1978). J. Cryst. Mol. Struct. 8, 317-320.]); Cremer & Pople (1975[Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354-1358.]). For bond-length data, see: Allen et al. (1987[Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1-19.]). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986[Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105-107.]).

[Scheme 1]

Experimental

Crystal data
  • C18H20N2O5

  • Mr = 344.36

  • Triclinic, [P \overline 1]

  • a = 5.5727 (1) Å

  • b = 10.8497 (1) Å

  • c = 14.2803 (2) Å

  • α = 100.911 (1)°

  • β = 96.532 (1)°

  • γ = 90.237 (1)°

  • V = 842.01 (2) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 100 K

  • 0.36 × 0.20 × 0.17 mm

Data collection
  • Bruker SMART APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005[Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]) Tmin = 0.965, Tmax = 0.983

  • 21972 measured reflections

  • 4888 independent reflections

  • 3893 reflections with I > 2σ(I)

  • Rint = 0.038

Refinement
  • R[F2 > 2σ(F2)] = 0.041

  • wR(F2) = 0.103

  • S = 1.03

  • 4888 reflections

  • 229 parameters

  • H-atom parameters constrained

  • Δρmax = 0.40 e Å−3

  • Δρmin = −0.23 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
C16—H16A⋯O1i 0.96 2.57 3.2408 (16) 127
C16—H16ACg1i 0.96 2.91 3.7511 (14) 147
Symmetry code: (i) x-1, y-1, z. Cg1 is the centroid of the C1–C6 phenyl ring.

Data collection: APEX2 (Bruker, 2005[Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2005[Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009[Spek, A. L. (2009). Acta Cryst. D65, 148-155.]).

Supporting information


Comment top

Dysidamide is a novel metabolite from a red sea sponge Lamellodysidea herbacea (Carmely et al., 1990; Manero et al., 2006; Sauleau & Bourguet-Kondracki, 2005). This hexachloro pyrrolidinone metabolite displayed remarkable biological activities such as cytotoxic activity for mesencephalic and cortical murine neuronal cell culture. We have synthesized the title compound with a spiro structure in the ring which is rare in nature, which eventually can be used as a multi-step syntheses of this marine metabolite, dysidamide, and its structure is reported here.

In the title compound (Fig. 1), the pyrrolidine ring (N1/C8–C11) adopts an envelope conformation (Boeyens, 1978; Cremer & Pople, 1975) with puckering parameters of Q = 0.1375 (12) Å and φ = 80.1 (5)°. Atom C9 deviates from the least-square plane through the remaining four atoms by 0.222 (2) Å. In contrast, the pyrrolidine ring is approximately planar in the molecular structure of 3,3-dimethylpyrrolidine-2,4-dione (Hamzah et al., 2006) due to the absence of bulky groups. The dihydroisoxazole ring (C11—C13/N2/O3) is essentially planar, with a maximum deviation of 0.041 (1) Å for atom C11, and a N2–O3–C11–C12 torsion angle of -6.70 (11)°. The benzene ring (C1–C6) forms a dihedral angle of 65.19 (6)° with the dihydroisoxazole ring. Bond lengths (Allen et al., 1987) and angles are within normal ranges.

In the crystal structure (Fig. 2), neighbouring molecules are linked into one-dimensional chains along the [1 1 0] by intermolecular C16—H16A···O1 hydrogen bonds and weak C16—H16A···Cg1 interactions (Table 1).

Related literature top

For general background and applications of the title compound, see: Carmely et al. (1990); Manero et al. (2006); Sauleau & Bourguet-Kondracki (2005). For a related structure, see: Hamzah et al. (2006). For ring conformations and ring puckering analysis, see: Boeyens (1978); Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). Cg1 is the centroid of the C1–C6 phenyl ring.

Experimental top

Hydroximoyl chloride (800 mg, 5.28 mmol) was dissolved in diethyl ether (100 ml) at 273 K. N-protected-5-methylene-pyrrolidine-2,4-dione (1.00 g, 4.36 mmol) was then added. To this mixture 5.28 ml (0.5 M, 10.56 mmol) of triethylamine solution in ether was added dropwise at a rate of 8 to 10 drops/min over 4 h, then kept stirring overnight. The mixture was then quenched by addition of HCl (100 ml, 2.0 N) and partitioned against ether (4 x 60 ml). The combined organic phases were washed with NaHCO3 (100 ml) and water (2 x 100 ml), then dried with MgSO4, and concentrated in vacuo (15 mbar) to give a yellowish oil, which was chromatographed to give 960 mg of colourless solid. Crystallization from diethyl ether gave analytically and spectroscopically pure spiroisoxazoline (860 mg, 57%) as colourless crystals (m.p. 372–373 K).

Refinement top

H atoms were placed in calculated positions, with C—H = 0.93–0.97 Å, and refined using a riding model, with Uiso = 1.2 or 1.5 Ueq(C). A rotating group model was used for the methyl groups.

Structure description top

Dysidamide is a novel metabolite from a red sea sponge Lamellodysidea herbacea (Carmely et al., 1990; Manero et al., 2006; Sauleau & Bourguet-Kondracki, 2005). This hexachloro pyrrolidinone metabolite displayed remarkable biological activities such as cytotoxic activity for mesencephalic and cortical murine neuronal cell culture. We have synthesized the title compound with a spiro structure in the ring which is rare in nature, which eventually can be used as a multi-step syntheses of this marine metabolite, dysidamide, and its structure is reported here.

In the title compound (Fig. 1), the pyrrolidine ring (N1/C8–C11) adopts an envelope conformation (Boeyens, 1978; Cremer & Pople, 1975) with puckering parameters of Q = 0.1375 (12) Å and φ = 80.1 (5)°. Atom C9 deviates from the least-square plane through the remaining four atoms by 0.222 (2) Å. In contrast, the pyrrolidine ring is approximately planar in the molecular structure of 3,3-dimethylpyrrolidine-2,4-dione (Hamzah et al., 2006) due to the absence of bulky groups. The dihydroisoxazole ring (C11—C13/N2/O3) is essentially planar, with a maximum deviation of 0.041 (1) Å for atom C11, and a N2–O3–C11–C12 torsion angle of -6.70 (11)°. The benzene ring (C1–C6) forms a dihedral angle of 65.19 (6)° with the dihydroisoxazole ring. Bond lengths (Allen et al., 1987) and angles are within normal ranges.

In the crystal structure (Fig. 2), neighbouring molecules are linked into one-dimensional chains along the [1 1 0] by intermolecular C16—H16A···O1 hydrogen bonds and weak C16—H16A···Cg1 interactions (Table 1).

For general background and applications of the title compound, see: Carmely et al. (1990); Manero et al. (2006); Sauleau & Bourguet-Kondracki (2005). For a related structure, see: Hamzah et al. (2006). For ring conformations and ring puckering analysis, see: Boeyens (1978); Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). Cg1 is the centroid of the C1–C6 phenyl ring.

Computing details top

Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids for non-H atoms and the atom-numbering scheme.
[Figure 2] Fig. 2. The crystal structure of the title compound, viewed along the c axis, showing chains along the [110]. Hydrogen bonds are shown as dashed lines.
(5R)-Ethyl 6-benzyl-8,8-dimethyl-7,9-dioxo-1-oxa-2,6-diazaspiro[4.4]non-2-ene-3-carboxylate top
Crystal data top
C18H20N2O5Z = 2
Mr = 344.36F(000) = 364
Triclinic, P1Dx = 1.358 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.5727 (1) ÅCell parameters from 6232 reflections
b = 10.8497 (1) Åθ = 2.2–31.8°
c = 14.2803 (2) ŵ = 0.10 mm1
α = 100.911 (1)°T = 100 K
β = 96.532 (1)°Plate, colourless
γ = 90.237 (1)°0.36 × 0.20 × 0.17 mm
V = 842.01 (2) Å3
Data collection top
Bruker SMART APEXII CCD area-detector
diffractometer
4888 independent reflections
Radiation source: fine-focus sealed tube3893 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.038
φ and ω scansθmax = 30.0°, θmin = 1.9°
Absorption correction: multi-scan
(SADABS; Bruker, 2005)
h = 77
Tmin = 0.965, Tmax = 0.983k = 1515
21972 measured reflectionsl = 2020
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0442P)2 + 0.2829P]
where P = (Fo2 + 2Fc2)/3
4888 reflections(Δ/σ)max = 0.001
229 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = 0.23 e Å3
Crystal data top
C18H20N2O5γ = 90.237 (1)°
Mr = 344.36V = 842.01 (2) Å3
Triclinic, P1Z = 2
a = 5.5727 (1) ÅMo Kα radiation
b = 10.8497 (1) ŵ = 0.10 mm1
c = 14.2803 (2) ÅT = 100 K
α = 100.911 (1)°0.36 × 0.20 × 0.17 mm
β = 96.532 (1)°
Data collection top
Bruker SMART APEXII CCD area-detector
diffractometer
4888 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2005)
3893 reflections with I > 2σ(I)
Tmin = 0.965, Tmax = 0.983Rint = 0.038
21972 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0410 restraints
wR(F2) = 0.103H-atom parameters constrained
S = 1.03Δρmax = 0.40 e Å3
4888 reflectionsΔρmin = 0.23 e Å3
229 parameters
Special details top

Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.53030 (15)0.76962 (8)0.26077 (6)0.01793 (18)
O20.1624 (2)0.63031 (10)0.50066 (7)0.0355 (3)
O30.11125 (14)0.55167 (8)0.30096 (6)0.01750 (18)
O40.06035 (17)0.15205 (8)0.32887 (7)0.0278 (2)
O50.30443 (15)0.17804 (8)0.25016 (6)0.01902 (18)
N10.27928 (17)0.60309 (9)0.26453 (7)0.01435 (19)
N20.20831 (17)0.42836 (9)0.28294 (7)0.0160 (2)
C10.0217 (2)0.69660 (12)0.10602 (9)0.0202 (2)
H1A0.11420.68660.15450.024*
C20.0965 (2)0.77651 (13)0.04324 (10)0.0243 (3)
H2A0.23820.82050.05050.029*
C30.0384 (2)0.79100 (13)0.03008 (9)0.0243 (3)
H3A0.01320.84410.07200.029*
C40.2504 (2)0.72606 (12)0.04063 (9)0.0214 (2)
H4A0.34100.73490.08990.026*
C50.3269 (2)0.64765 (11)0.02275 (8)0.0172 (2)
H5A0.47040.60520.01610.021*
C60.1919 (2)0.63167 (11)0.09602 (8)0.0155 (2)
C70.2811 (2)0.54453 (11)0.16325 (8)0.0170 (2)
H7A0.17930.46900.14900.020*
H7B0.44430.52020.15220.020*
C80.39757 (19)0.71552 (10)0.30263 (8)0.0135 (2)
C90.3302 (2)0.76286 (10)0.40337 (8)0.0145 (2)
C100.2086 (2)0.64820 (11)0.42404 (8)0.0181 (2)
C110.1512 (2)0.55087 (10)0.33003 (8)0.0141 (2)
C120.2001 (2)0.41513 (11)0.33980 (9)0.0160 (2)
H12A0.32340.37950.30070.019*
H12B0.24790.40850.40610.019*
C130.0410 (2)0.35410 (10)0.30338 (8)0.0137 (2)
C140.0892 (2)0.21729 (11)0.29615 (8)0.0161 (2)
C150.3570 (2)0.04300 (11)0.23740 (9)0.0218 (3)
H15A0.39530.02200.29720.026*
H15B0.21810.00440.21770.026*
C160.5689 (2)0.01234 (12)0.16140 (10)0.0248 (3)
H16A0.60690.07600.15040.037*
H16B0.52960.03470.10290.037*
H16C0.70590.05870.18220.037*
C170.1416 (2)0.86566 (12)0.39864 (10)0.0217 (2)
H17A0.00400.83220.35420.033*
H17B0.21160.93520.37760.033*
H17C0.09170.89360.46120.033*
C180.5478 (2)0.80908 (12)0.47626 (9)0.0214 (2)
H18A0.66560.74460.47450.032*
H18B0.49750.82910.53940.032*
H18C0.61770.88270.46090.032*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0182 (4)0.0173 (4)0.0202 (4)0.0018 (3)0.0037 (3)0.0074 (3)
O20.0614 (7)0.0298 (5)0.0160 (5)0.0177 (5)0.0121 (5)0.0021 (4)
O30.0153 (4)0.0126 (4)0.0253 (4)0.0012 (3)0.0016 (3)0.0058 (3)
O40.0284 (5)0.0157 (4)0.0369 (6)0.0009 (4)0.0106 (4)0.0078 (4)
O50.0207 (4)0.0128 (4)0.0229 (4)0.0043 (3)0.0033 (3)0.0053 (3)
N10.0194 (4)0.0124 (4)0.0119 (4)0.0020 (3)0.0032 (3)0.0030 (3)
N20.0186 (5)0.0126 (5)0.0170 (5)0.0030 (3)0.0018 (4)0.0037 (4)
C10.0182 (5)0.0228 (6)0.0203 (6)0.0005 (4)0.0030 (4)0.0049 (5)
C20.0185 (6)0.0255 (7)0.0281 (7)0.0033 (5)0.0019 (5)0.0062 (5)
C30.0293 (6)0.0235 (6)0.0197 (6)0.0010 (5)0.0063 (5)0.0089 (5)
C40.0284 (6)0.0218 (6)0.0145 (5)0.0033 (5)0.0013 (5)0.0051 (5)
C50.0197 (5)0.0166 (5)0.0148 (5)0.0004 (4)0.0025 (4)0.0018 (4)
C60.0190 (5)0.0140 (5)0.0128 (5)0.0022 (4)0.0001 (4)0.0019 (4)
C70.0238 (6)0.0148 (5)0.0128 (5)0.0005 (4)0.0039 (4)0.0024 (4)
C80.0141 (5)0.0118 (5)0.0151 (5)0.0011 (4)0.0004 (4)0.0043 (4)
C90.0159 (5)0.0134 (5)0.0140 (5)0.0021 (4)0.0016 (4)0.0022 (4)
C100.0218 (5)0.0166 (5)0.0159 (5)0.0020 (4)0.0037 (4)0.0026 (4)
C110.0153 (5)0.0140 (5)0.0138 (5)0.0016 (4)0.0014 (4)0.0048 (4)
C120.0168 (5)0.0135 (5)0.0186 (5)0.0009 (4)0.0001 (4)0.0066 (4)
C130.0165 (5)0.0135 (5)0.0117 (5)0.0013 (4)0.0024 (4)0.0032 (4)
C140.0193 (5)0.0150 (5)0.0142 (5)0.0019 (4)0.0013 (4)0.0034 (4)
C150.0288 (6)0.0115 (5)0.0242 (6)0.0051 (5)0.0043 (5)0.0053 (5)
C160.0271 (6)0.0180 (6)0.0269 (7)0.0045 (5)0.0058 (5)0.0041 (5)
C170.0201 (6)0.0181 (6)0.0261 (6)0.0038 (4)0.0036 (5)0.0019 (5)
C180.0198 (5)0.0246 (6)0.0179 (6)0.0032 (5)0.0007 (4)0.0014 (5)
Geometric parameters (Å, º) top
O1—C81.2160 (13)C7—H7B0.97
O2—C101.2022 (15)C8—C91.5228 (16)
O3—N21.4074 (12)C9—C101.5072 (16)
O3—C111.4748 (13)C9—C181.5218 (16)
O4—C141.2065 (14)C9—C171.5413 (16)
O5—C141.3273 (14)C10—C111.5436 (16)
O5—C151.4659 (14)C11—C121.5281 (16)
N1—C81.3708 (14)C12—C131.4891 (16)
N1—C111.4333 (14)C12—H12A0.97
N1—C71.4666 (14)C12—H12B0.97
N2—C131.2793 (15)C13—C141.4894 (16)
C1—C21.3933 (18)C15—C161.5006 (17)
C1—C61.3935 (16)C15—H15A0.97
C1—H1A0.93C15—H15B0.97
C2—C31.3882 (19)C16—H16A0.96
C2—H2A0.93C16—H16B0.96
C3—C41.3861 (19)C16—H16C0.96
C3—H3A0.93C17—H17A0.96
C4—C51.3897 (17)C17—H17B0.96
C4—H4A0.93C17—H17C0.96
C5—C61.3918 (16)C18—H18A0.96
C5—H5A0.93C18—H18B0.96
C6—C71.5170 (16)C18—H18C0.96
C7—H7A0.97
N2—O3—C11109.86 (8)N1—C11—O3110.01 (9)
C14—O5—C15115.70 (9)N1—C11—C12117.91 (9)
C8—N1—C11115.03 (9)O3—C11—C12104.33 (9)
C8—N1—C7121.36 (9)N1—C11—C10102.13 (9)
C11—N1—C7123.59 (9)O3—C11—C10107.65 (9)
C13—N2—O3108.85 (9)C12—C11—C10114.56 (9)
C2—C1—C6119.84 (11)C13—C12—C11101.13 (9)
C2—C1—H1A120.1C13—C12—H12A111.5
C6—C1—H1A120.1C11—C12—H12A111.5
C3—C2—C1120.60 (12)C13—C12—H12B111.5
C3—C2—H2A119.7C11—C12—H12B111.5
C1—C2—H2A119.7H12A—C12—H12B109.4
C4—C3—C2119.76 (11)N2—C13—C12115.35 (10)
C4—C3—H3A120.1N2—C13—C14121.88 (10)
C2—C3—H3A120.1C12—C13—C14122.68 (10)
C3—C4—C5119.69 (11)O4—C14—O5125.57 (11)
C3—C4—H4A120.2O4—C14—C13120.96 (10)
C5—C4—H4A120.2O5—C14—C13113.47 (10)
C4—C5—C6121.01 (11)O5—C15—C16107.20 (10)
C4—C5—H5A119.5O5—C15—H15A110.3
C6—C5—H5A119.5C16—C15—H15A110.3
C5—C6—C1119.10 (11)O5—C15—H15B110.3
C5—C6—C7119.32 (10)C16—C15—H15B110.3
C1—C6—C7121.58 (10)H15A—C15—H15B108.5
N1—C7—C6112.30 (9)C15—C16—H16A109.5
N1—C7—H7A109.1C15—C16—H16B109.5
C6—C7—H7A109.1H16A—C16—H16B109.5
N1—C7—H7B109.1C15—C16—H16C109.5
C6—C7—H7B109.1H16A—C16—H16C109.5
H7A—C7—H7B107.9H16B—C16—H16C109.5
O1—C8—N1124.73 (10)C9—C17—H17A109.5
O1—C8—C9125.87 (10)C9—C17—H17B109.5
N1—C8—C9109.37 (9)H17A—C17—H17B109.5
C10—C9—C18112.41 (10)C9—C17—H17C109.5
C10—C9—C8101.90 (9)H17A—C17—H17C109.5
C18—C9—C8113.02 (9)H17B—C17—H17C109.5
C10—C9—C17108.72 (9)C9—C18—H18A109.5
C18—C9—C17111.74 (10)C9—C18—H18B109.5
C8—C9—C17108.54 (9)H18A—C18—H18B109.5
O2—C10—C9127.32 (11)C9—C18—H18C109.5
O2—C10—C11123.09 (11)H18A—C18—H18C109.5
C9—C10—C11109.58 (9)H18B—C18—H18C109.5
C11—O3—N2—C134.15 (12)C8—N1—C11—O3112.65 (10)
C6—C1—C2—C30.8 (2)C7—N1—C11—O365.65 (13)
C1—C2—C3—C40.4 (2)C8—N1—C11—C12127.96 (11)
C2—C3—C4—C50.45 (19)C7—N1—C11—C1253.74 (15)
C3—C4—C5—C60.98 (18)C8—N1—C11—C101.45 (12)
C4—C5—C6—C10.62 (18)C7—N1—C11—C10179.76 (10)
C4—C5—C6—C7179.60 (11)N2—O3—C11—N1120.68 (9)
C2—C1—C6—C50.26 (18)N2—O3—C11—C126.70 (11)
C2—C1—C6—C7179.51 (11)N2—O3—C11—C10128.80 (9)
C8—N1—C7—C655.05 (14)O2—C10—C11—N1169.17 (13)
C11—N1—C7—C6123.15 (11)C9—C10—C11—N110.03 (12)
C5—C6—C7—N1130.98 (11)O2—C10—C11—O375.00 (15)
C1—C6—C7—N148.79 (15)C9—C10—C11—O3105.80 (10)
C11—N1—C8—O1174.18 (10)O2—C10—C11—C1240.52 (17)
C7—N1—C8—O17.48 (17)C9—C10—C11—C12138.68 (10)
C11—N1—C8—C97.56 (13)N1—C11—C12—C13116.02 (10)
C7—N1—C8—C9170.79 (9)O3—C11—C12—C136.31 (11)
O1—C8—C9—C10168.78 (11)C10—C11—C12—C13123.75 (10)
N1—C8—C9—C1012.98 (12)O3—N2—C13—C120.42 (13)
O1—C8—C9—C1847.93 (15)O3—N2—C13—C14177.19 (9)
N1—C8—C9—C18133.83 (10)C11—C12—C13—N24.48 (13)
O1—C8—C9—C1776.60 (14)C11—C12—C13—C14178.79 (10)
N1—C8—C9—C17101.64 (10)C15—O5—C14—O41.42 (17)
C18—C9—C10—O244.01 (18)C15—O5—C14—C13177.48 (9)
C8—C9—C10—O2165.29 (13)N2—C13—C14—O4168.93 (12)
C17—C9—C10—O280.23 (16)C12—C13—C14—O47.60 (17)
C18—C9—C10—C11135.14 (10)N2—C13—C14—O512.11 (16)
C8—C9—C10—C1113.86 (12)C12—C13—C14—O5171.37 (10)
C17—C9—C10—C11100.62 (11)C14—O5—C15—C16163.82 (10)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C16—H16A···O1i0.962.573.2408 (16)127
C16—H16A···Cg1i0.962.913.7511 (14)147
Symmetry code: (i) x1, y1, z.

Experimental details

Crystal data
Chemical formulaC18H20N2O5
Mr344.36
Crystal system, space groupTriclinic, P1
Temperature (K)100
a, b, c (Å)5.5727 (1), 10.8497 (1), 14.2803 (2)
α, β, γ (°)100.911 (1), 96.532 (1), 90.237 (1)
V3)842.01 (2)
Z2
Radiation typeMo Kα
µ (mm1)0.10
Crystal size (mm)0.36 × 0.20 × 0.17
Data collection
DiffractometerBruker SMART APEXII CCD area-detector
Absorption correctionMulti-scan
(SADABS; Bruker, 2005)
Tmin, Tmax0.965, 0.983
No. of measured, independent and
observed [I > 2σ(I)] reflections
21972, 4888, 3893
Rint0.038
(sin θ/λ)max1)0.703
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.041, 0.103, 1.03
No. of reflections4888
No. of parameters229
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.40, 0.23

Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C16—H16A···O1i0.962.573.2408 (16)127
C16—H16A···Cg1i0.962.913.7511 (14)147
Symmetry code: (i) x1, y1, z.
 

Footnotes

Thomson Reuters ResearcherID: C-7576-2009.

§Thomson Reuters ResearcherID: A-3561-2009.

Acknowledgements

The authors are grateful to the Ministry of Higher Education (MOHE) and Universiti Teknologi MARA for financial support. HKF and JHG thank Universiti Sains Malaysia (USM) for the Research University Golden Goose grant (No. 1001/PFIZIK/811012). JHG also thanks USM for the award of a USM fellowship.

References

First citationAllen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.  CSD CrossRef Web of Science Google Scholar
First citationBoeyens, J. C. A. (1978). J. Cryst. Mol. Struct. 8, 317–320.  CrossRef Web of Science Google Scholar
First citationBruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.  Google Scholar
First citationCarmely, S., Gebreyesus, T., Kashman, Y., Skelton, B. W., White, A. H. & Yosief, T. (1990). Aust. J. Chem. 43, 1881–1888.  CrossRef CAS Google Scholar
First citationCosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.  CrossRef CAS Web of Science IUCr Journals Google Scholar
First citationCremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358.  CrossRef CAS Web of Science Google Scholar
First citationHamzah, A. S., Shaameri, Z. & Yamin, B. M. (2006). Acta Cryst. E62, o1795–o1797.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationManero, F., Sauleau, P., Juin, P., Vallette, F. M. & Bourguet-Kondracki, M.-L. (2006). Electron. J. Nat. Substances, SI 1, 46.  Google Scholar
First citationSauleau, P. & Bourguet-Kondracki, M.-L. (2005). Steroids, 70, 954–959.  Web of Science CrossRef PubMed CAS Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationSpek, A. L. (2009). Acta Cryst. D65, 148–155.  Web of Science CrossRef CAS IUCr Journals Google Scholar

This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds