organic compounds
(5R)-Ethyl 6-benzyl-8,8-dimethyl-7,9-dioxo-1-oxa-2,6-diazaspiro[4.4]non-2-ene-3-carboxylate
aInstitute of Science, Universiti Teknologi MARA, 40450 Shah Alam, Selangor, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C18H20N2O5, the pyrrolidine ring adopts an with the C atom bonded to the methyl groups as the flap. The dihydroisoxazole ring is essentially planar (r.m.s. deviation = 0.041 Å) and forms a dihedral angle of 65.19 (6)° with the phenyl ring. In the crystal, neighbouring molecules are linked into chains along [110] by intermolecular C—H⋯O hydrogen bonds and weak C—H⋯π interactions involving the phenyl ring.
Related literature
For general background and applications of the title compound, see: Carmely et al. (1990); Manero et al. (2006); Sauleau & Bourguet-Kondracki (2005). For a related structure, see: Hamzah et al. (2006). For ring conformations and ring puckering analysis, see: Boeyens (1978); Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536809042433/ci2940sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809042433/ci2940Isup2.hkl
Hydroximoyl chloride (800 mg, 5.28 mmol) was dissolved in diethyl ether (100 ml) at 273 K. N-protected-5-methylene-pyrrolidine-2,4-dione (1.00 g, 4.36 mmol) was then added. To this mixture 5.28 ml (0.5 M, 10.56 mmol) of triethylamine solution in ether was added dropwise at a rate of 8 to 10 drops/min over 4 h, then kept stirring overnight. The mixture was then quenched by addition of HCl (100 ml, 2.0 N) and partitioned against ether (4 x 60 ml). The combined organic phases were washed with NaHCO3 (100 ml) and water (2 x 100 ml), then dried with MgSO4, and concentrated in vacuo (15 mbar) to give a yellowish oil, which was chromatographed to give 960 mg of colourless solid. Crystallization from diethyl ether gave analytically and spectroscopically pure spiroisoxazoline (860 mg, 57%) as colourless crystals (m.p. 372–373 K).
H atoms were placed in calculated positions, with C—H = 0.93–0.97 Å, and refined using a riding model, with Uiso = 1.2 or 1.5 Ueq(C). A rotating group model was used for the methyl groups.
Dysidamide is a novel metabolite from a red sea sponge Lamellodysidea herbacea (Carmely et al., 1990; Manero et al., 2006; Sauleau & Bourguet-Kondracki, 2005). This hexachloro pyrrolidinone metabolite displayed remarkable biological activities such as cytotoxic activity for mesencephalic and cortical murine neuronal cell culture. We have synthesized the title compound with a spiro structure in the ring which is rare in nature, which eventually can be used as a multi-step syntheses of this marine metabolite, dysidamide, and its structure is reported here.
In the title compound (Fig. 1), the pyrrolidine ring (N1/C8–C11) adopts an φ = 80.1 (5)°. Atom C9 deviates from the least-square plane through the remaining four atoms by 0.222 (2) Å. In contrast, the pyrrolidine ring is approximately planar in the molecular structure of 3,3-dimethylpyrrolidine-2,4-dione (Hamzah et al., 2006) due to the absence of bulky groups. The dihydroisoxazole ring (C11—C13/N2/O3) is essentially planar, with a maximum deviation of 0.041 (1) Å for atom C11, and a N2–O3–C11–C12 torsion angle of -6.70 (11)°. The benzene ring (C1–C6) forms a dihedral angle of 65.19 (6)° with the dihydroisoxazole ring. Bond lengths (Allen et al., 1987) and angles are within normal ranges.
(Boeyens, 1978; Cremer & Pople, 1975) with puckering parameters of Q = 0.1375 (12) Å andIn the
(Fig. 2), neighbouring molecules are linked into one-dimensional chains along the [1 1 0] by intermolecular C16—H16A···O1 hydrogen bonds and weak C16—H16A···Cg1 interactions (Table 1).For general background and applications of the title compound, see: Carmely et al. (1990); Manero et al. (2006); Sauleau & Bourguet-Kondracki (2005). For a related structure, see: Hamzah et al. (2006). For ring conformations and ring puckering analysis, see: Boeyens (1978); Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). Cg1 is the centroid of the C1–C6 phenyl ring.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C18H20N2O5 | Z = 2 |
Mr = 344.36 | F(000) = 364 |
Triclinic, P1 | Dx = 1.358 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.5727 (1) Å | Cell parameters from 6232 reflections |
b = 10.8497 (1) Å | θ = 2.2–31.8° |
c = 14.2803 (2) Å | µ = 0.10 mm−1 |
α = 100.911 (1)° | T = 100 K |
β = 96.532 (1)° | Plate, colourless |
γ = 90.237 (1)° | 0.36 × 0.20 × 0.17 mm |
V = 842.01 (2) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 4888 independent reflections |
Radiation source: fine-focus sealed tube | 3893 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
φ and ω scans | θmax = 30.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −7→7 |
Tmin = 0.965, Tmax = 0.983 | k = −15→15 |
21972 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0442P)2 + 0.2829P] where P = (Fo2 + 2Fc2)/3 |
4888 reflections | (Δ/σ)max = 0.001 |
229 parameters | Δρmax = 0.40 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C18H20N2O5 | γ = 90.237 (1)° |
Mr = 344.36 | V = 842.01 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.5727 (1) Å | Mo Kα radiation |
b = 10.8497 (1) Å | µ = 0.10 mm−1 |
c = 14.2803 (2) Å | T = 100 K |
α = 100.911 (1)° | 0.36 × 0.20 × 0.17 mm |
β = 96.532 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 4888 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 3893 reflections with I > 2σ(I) |
Tmin = 0.965, Tmax = 0.983 | Rint = 0.038 |
21972 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.40 e Å−3 |
4888 reflections | Δρmin = −0.23 e Å−3 |
229 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.53030 (15) | 0.76962 (8) | 0.26077 (6) | 0.01793 (18) | |
O2 | 0.1624 (2) | 0.63031 (10) | 0.50066 (7) | 0.0355 (3) | |
O3 | −0.11125 (14) | 0.55167 (8) | 0.30096 (6) | 0.01750 (18) | |
O4 | 0.06035 (17) | 0.15205 (8) | 0.32887 (7) | 0.0278 (2) | |
O5 | −0.30443 (15) | 0.17804 (8) | 0.25016 (6) | 0.01902 (18) | |
N1 | 0.27928 (17) | 0.60309 (9) | 0.26453 (7) | 0.01435 (19) | |
N2 | −0.20831 (17) | 0.42836 (9) | 0.28294 (7) | 0.0160 (2) | |
C1 | −0.0217 (2) | 0.69660 (12) | 0.10602 (9) | 0.0202 (2) | |
H1A | −0.1142 | 0.6866 | 0.1545 | 0.024* | |
C2 | −0.0965 (2) | 0.77651 (13) | 0.04324 (10) | 0.0243 (3) | |
H2A | −0.2382 | 0.8205 | 0.0505 | 0.029* | |
C3 | 0.0384 (2) | 0.79100 (13) | −0.03008 (9) | 0.0243 (3) | |
H3A | −0.0132 | 0.8441 | −0.0720 | 0.029* | |
C4 | 0.2504 (2) | 0.72606 (12) | −0.04063 (9) | 0.0214 (2) | |
H4A | 0.3410 | 0.7349 | −0.0899 | 0.026* | |
C5 | 0.3269 (2) | 0.64765 (11) | 0.02275 (8) | 0.0172 (2) | |
H5A | 0.4704 | 0.6052 | 0.0161 | 0.021* | |
C6 | 0.1919 (2) | 0.63167 (11) | 0.09602 (8) | 0.0155 (2) | |
C7 | 0.2811 (2) | 0.54453 (11) | 0.16325 (8) | 0.0170 (2) | |
H7A | 0.1793 | 0.4690 | 0.1490 | 0.020* | |
H7B | 0.4443 | 0.5202 | 0.1522 | 0.020* | |
C8 | 0.39757 (19) | 0.71552 (10) | 0.30263 (8) | 0.0135 (2) | |
C9 | 0.3302 (2) | 0.76286 (10) | 0.40337 (8) | 0.0145 (2) | |
C10 | 0.2086 (2) | 0.64820 (11) | 0.42404 (8) | 0.0181 (2) | |
C11 | 0.1512 (2) | 0.55087 (10) | 0.33003 (8) | 0.0141 (2) | |
C12 | 0.2001 (2) | 0.41513 (11) | 0.33980 (9) | 0.0160 (2) | |
H12A | 0.3234 | 0.3795 | 0.3007 | 0.019* | |
H12B | 0.2479 | 0.4085 | 0.4061 | 0.019* | |
C13 | −0.0410 (2) | 0.35410 (10) | 0.30338 (8) | 0.0137 (2) | |
C14 | −0.0892 (2) | 0.21729 (11) | 0.29615 (8) | 0.0161 (2) | |
C15 | −0.3570 (2) | 0.04300 (11) | 0.23740 (9) | 0.0218 (3) | |
H15A | −0.3953 | 0.0220 | 0.2972 | 0.026* | |
H15B | −0.2181 | −0.0044 | 0.2177 | 0.026* | |
C16 | −0.5689 (2) | 0.01234 (12) | 0.16140 (10) | 0.0248 (3) | |
H16A | −0.6069 | −0.0760 | 0.1504 | 0.037* | |
H16B | −0.5296 | 0.0347 | 0.1029 | 0.037* | |
H16C | −0.7059 | 0.0587 | 0.1822 | 0.037* | |
C17 | 0.1416 (2) | 0.86566 (12) | 0.39864 (10) | 0.0217 (2) | |
H17A | 0.0040 | 0.8322 | 0.3542 | 0.033* | |
H17B | 0.2116 | 0.9352 | 0.3776 | 0.033* | |
H17C | 0.0917 | 0.8936 | 0.4612 | 0.033* | |
C18 | 0.5478 (2) | 0.80908 (12) | 0.47626 (9) | 0.0214 (2) | |
H18A | 0.6656 | 0.7446 | 0.4745 | 0.032* | |
H18B | 0.4975 | 0.8291 | 0.5394 | 0.032* | |
H18C | 0.6177 | 0.8827 | 0.4609 | 0.032* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0182 (4) | 0.0173 (4) | 0.0202 (4) | −0.0018 (3) | 0.0037 (3) | 0.0074 (3) |
O2 | 0.0614 (7) | 0.0298 (5) | 0.0160 (5) | −0.0177 (5) | 0.0121 (5) | 0.0021 (4) |
O3 | 0.0153 (4) | 0.0126 (4) | 0.0253 (4) | −0.0012 (3) | 0.0016 (3) | 0.0058 (3) |
O4 | 0.0284 (5) | 0.0157 (4) | 0.0369 (6) | −0.0009 (4) | −0.0106 (4) | 0.0078 (4) |
O5 | 0.0207 (4) | 0.0128 (4) | 0.0229 (4) | −0.0043 (3) | −0.0033 (3) | 0.0053 (3) |
N1 | 0.0194 (4) | 0.0124 (4) | 0.0119 (4) | −0.0020 (3) | 0.0032 (3) | 0.0030 (3) |
N2 | 0.0186 (5) | 0.0126 (5) | 0.0170 (5) | −0.0030 (3) | 0.0018 (4) | 0.0037 (4) |
C1 | 0.0182 (5) | 0.0228 (6) | 0.0203 (6) | −0.0005 (4) | 0.0030 (4) | 0.0049 (5) |
C2 | 0.0185 (6) | 0.0255 (7) | 0.0281 (7) | 0.0033 (5) | −0.0019 (5) | 0.0062 (5) |
C3 | 0.0293 (6) | 0.0235 (6) | 0.0197 (6) | −0.0010 (5) | −0.0063 (5) | 0.0089 (5) |
C4 | 0.0284 (6) | 0.0218 (6) | 0.0145 (5) | −0.0033 (5) | 0.0013 (5) | 0.0051 (5) |
C5 | 0.0197 (5) | 0.0166 (5) | 0.0148 (5) | 0.0004 (4) | 0.0025 (4) | 0.0018 (4) |
C6 | 0.0190 (5) | 0.0140 (5) | 0.0128 (5) | −0.0022 (4) | −0.0001 (4) | 0.0019 (4) |
C7 | 0.0238 (6) | 0.0148 (5) | 0.0128 (5) | 0.0005 (4) | 0.0039 (4) | 0.0024 (4) |
C8 | 0.0141 (5) | 0.0118 (5) | 0.0151 (5) | 0.0011 (4) | 0.0004 (4) | 0.0043 (4) |
C9 | 0.0159 (5) | 0.0134 (5) | 0.0140 (5) | −0.0021 (4) | 0.0016 (4) | 0.0022 (4) |
C10 | 0.0218 (5) | 0.0166 (5) | 0.0159 (5) | −0.0020 (4) | 0.0037 (4) | 0.0026 (4) |
C11 | 0.0153 (5) | 0.0140 (5) | 0.0138 (5) | −0.0016 (4) | 0.0014 (4) | 0.0048 (4) |
C12 | 0.0168 (5) | 0.0135 (5) | 0.0186 (5) | −0.0009 (4) | −0.0001 (4) | 0.0066 (4) |
C13 | 0.0165 (5) | 0.0135 (5) | 0.0117 (5) | −0.0013 (4) | 0.0024 (4) | 0.0032 (4) |
C14 | 0.0193 (5) | 0.0150 (5) | 0.0142 (5) | −0.0019 (4) | 0.0013 (4) | 0.0034 (4) |
C15 | 0.0288 (6) | 0.0115 (5) | 0.0242 (6) | −0.0051 (5) | −0.0043 (5) | 0.0053 (5) |
C16 | 0.0271 (6) | 0.0180 (6) | 0.0269 (7) | −0.0045 (5) | −0.0058 (5) | 0.0041 (5) |
C17 | 0.0201 (6) | 0.0181 (6) | 0.0261 (6) | 0.0038 (4) | 0.0036 (5) | 0.0019 (5) |
C18 | 0.0198 (5) | 0.0246 (6) | 0.0179 (6) | −0.0032 (5) | −0.0007 (4) | 0.0014 (5) |
O1—C8 | 1.2160 (13) | C7—H7B | 0.97 |
O2—C10 | 1.2022 (15) | C8—C9 | 1.5228 (16) |
O3—N2 | 1.4074 (12) | C9—C10 | 1.5072 (16) |
O3—C11 | 1.4748 (13) | C9—C18 | 1.5218 (16) |
O4—C14 | 1.2065 (14) | C9—C17 | 1.5413 (16) |
O5—C14 | 1.3273 (14) | C10—C11 | 1.5436 (16) |
O5—C15 | 1.4659 (14) | C11—C12 | 1.5281 (16) |
N1—C8 | 1.3708 (14) | C12—C13 | 1.4891 (16) |
N1—C11 | 1.4333 (14) | C12—H12A | 0.97 |
N1—C7 | 1.4666 (14) | C12—H12B | 0.97 |
N2—C13 | 1.2793 (15) | C13—C14 | 1.4894 (16) |
C1—C2 | 1.3933 (18) | C15—C16 | 1.5006 (17) |
C1—C6 | 1.3935 (16) | C15—H15A | 0.97 |
C1—H1A | 0.93 | C15—H15B | 0.97 |
C2—C3 | 1.3882 (19) | C16—H16A | 0.96 |
C2—H2A | 0.93 | C16—H16B | 0.96 |
C3—C4 | 1.3861 (19) | C16—H16C | 0.96 |
C3—H3A | 0.93 | C17—H17A | 0.96 |
C4—C5 | 1.3897 (17) | C17—H17B | 0.96 |
C4—H4A | 0.93 | C17—H17C | 0.96 |
C5—C6 | 1.3918 (16) | C18—H18A | 0.96 |
C5—H5A | 0.93 | C18—H18B | 0.96 |
C6—C7 | 1.5170 (16) | C18—H18C | 0.96 |
C7—H7A | 0.97 | ||
N2—O3—C11 | 109.86 (8) | N1—C11—O3 | 110.01 (9) |
C14—O5—C15 | 115.70 (9) | N1—C11—C12 | 117.91 (9) |
C8—N1—C11 | 115.03 (9) | O3—C11—C12 | 104.33 (9) |
C8—N1—C7 | 121.36 (9) | N1—C11—C10 | 102.13 (9) |
C11—N1—C7 | 123.59 (9) | O3—C11—C10 | 107.65 (9) |
C13—N2—O3 | 108.85 (9) | C12—C11—C10 | 114.56 (9) |
C2—C1—C6 | 119.84 (11) | C13—C12—C11 | 101.13 (9) |
C2—C1—H1A | 120.1 | C13—C12—H12A | 111.5 |
C6—C1—H1A | 120.1 | C11—C12—H12A | 111.5 |
C3—C2—C1 | 120.60 (12) | C13—C12—H12B | 111.5 |
C3—C2—H2A | 119.7 | C11—C12—H12B | 111.5 |
C1—C2—H2A | 119.7 | H12A—C12—H12B | 109.4 |
C4—C3—C2 | 119.76 (11) | N2—C13—C12 | 115.35 (10) |
C4—C3—H3A | 120.1 | N2—C13—C14 | 121.88 (10) |
C2—C3—H3A | 120.1 | C12—C13—C14 | 122.68 (10) |
C3—C4—C5 | 119.69 (11) | O4—C14—O5 | 125.57 (11) |
C3—C4—H4A | 120.2 | O4—C14—C13 | 120.96 (10) |
C5—C4—H4A | 120.2 | O5—C14—C13 | 113.47 (10) |
C4—C5—C6 | 121.01 (11) | O5—C15—C16 | 107.20 (10) |
C4—C5—H5A | 119.5 | O5—C15—H15A | 110.3 |
C6—C5—H5A | 119.5 | C16—C15—H15A | 110.3 |
C5—C6—C1 | 119.10 (11) | O5—C15—H15B | 110.3 |
C5—C6—C7 | 119.32 (10) | C16—C15—H15B | 110.3 |
C1—C6—C7 | 121.58 (10) | H15A—C15—H15B | 108.5 |
N1—C7—C6 | 112.30 (9) | C15—C16—H16A | 109.5 |
N1—C7—H7A | 109.1 | C15—C16—H16B | 109.5 |
C6—C7—H7A | 109.1 | H16A—C16—H16B | 109.5 |
N1—C7—H7B | 109.1 | C15—C16—H16C | 109.5 |
C6—C7—H7B | 109.1 | H16A—C16—H16C | 109.5 |
H7A—C7—H7B | 107.9 | H16B—C16—H16C | 109.5 |
O1—C8—N1 | 124.73 (10) | C9—C17—H17A | 109.5 |
O1—C8—C9 | 125.87 (10) | C9—C17—H17B | 109.5 |
N1—C8—C9 | 109.37 (9) | H17A—C17—H17B | 109.5 |
C10—C9—C18 | 112.41 (10) | C9—C17—H17C | 109.5 |
C10—C9—C8 | 101.90 (9) | H17A—C17—H17C | 109.5 |
C18—C9—C8 | 113.02 (9) | H17B—C17—H17C | 109.5 |
C10—C9—C17 | 108.72 (9) | C9—C18—H18A | 109.5 |
C18—C9—C17 | 111.74 (10) | C9—C18—H18B | 109.5 |
C8—C9—C17 | 108.54 (9) | H18A—C18—H18B | 109.5 |
O2—C10—C9 | 127.32 (11) | C9—C18—H18C | 109.5 |
O2—C10—C11 | 123.09 (11) | H18A—C18—H18C | 109.5 |
C9—C10—C11 | 109.58 (9) | H18B—C18—H18C | 109.5 |
C11—O3—N2—C13 | 4.15 (12) | C8—N1—C11—O3 | 112.65 (10) |
C6—C1—C2—C3 | 0.8 (2) | C7—N1—C11—O3 | −65.65 (13) |
C1—C2—C3—C4 | −0.4 (2) | C8—N1—C11—C12 | −127.96 (11) |
C2—C3—C4—C5 | −0.45 (19) | C7—N1—C11—C12 | 53.74 (15) |
C3—C4—C5—C6 | 0.98 (18) | C8—N1—C11—C10 | −1.45 (12) |
C4—C5—C6—C1 | −0.62 (18) | C7—N1—C11—C10 | −179.76 (10) |
C4—C5—C6—C7 | 179.60 (11) | N2—O3—C11—N1 | 120.68 (9) |
C2—C1—C6—C5 | −0.26 (18) | N2—O3—C11—C12 | −6.70 (11) |
C2—C1—C6—C7 | 179.51 (11) | N2—O3—C11—C10 | −128.80 (9) |
C8—N1—C7—C6 | −55.05 (14) | O2—C10—C11—N1 | −169.17 (13) |
C11—N1—C7—C6 | 123.15 (11) | C9—C10—C11—N1 | 10.03 (12) |
C5—C6—C7—N1 | 130.98 (11) | O2—C10—C11—O3 | 75.00 (15) |
C1—C6—C7—N1 | −48.79 (15) | C9—C10—C11—O3 | −105.80 (10) |
C11—N1—C8—O1 | 174.18 (10) | O2—C10—C11—C12 | −40.52 (17) |
C7—N1—C8—O1 | −7.48 (17) | C9—C10—C11—C12 | 138.68 (10) |
C11—N1—C8—C9 | −7.56 (13) | N1—C11—C12—C13 | −116.02 (10) |
C7—N1—C8—C9 | 170.79 (9) | O3—C11—C12—C13 | 6.31 (11) |
O1—C8—C9—C10 | −168.78 (11) | C10—C11—C12—C13 | 123.75 (10) |
N1—C8—C9—C10 | 12.98 (12) | O3—N2—C13—C12 | 0.42 (13) |
O1—C8—C9—C18 | −47.93 (15) | O3—N2—C13—C14 | 177.19 (9) |
N1—C8—C9—C18 | 133.83 (10) | C11—C12—C13—N2 | −4.48 (13) |
O1—C8—C9—C17 | 76.60 (14) | C11—C12—C13—C14 | 178.79 (10) |
N1—C8—C9—C17 | −101.64 (10) | C15—O5—C14—O4 | −1.42 (17) |
C18—C9—C10—O2 | 44.01 (18) | C15—O5—C14—C13 | 177.48 (9) |
C8—C9—C10—O2 | 165.29 (13) | N2—C13—C14—O4 | −168.93 (12) |
C17—C9—C10—O2 | −80.23 (16) | C12—C13—C14—O4 | 7.60 (17) |
C18—C9—C10—C11 | −135.14 (10) | N2—C13—C14—O5 | 12.11 (16) |
C8—C9—C10—C11 | −13.86 (12) | C12—C13—C14—O5 | −171.37 (10) |
C17—C9—C10—C11 | 100.62 (11) | C14—O5—C15—C16 | −163.82 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16A···O1i | 0.96 | 2.57 | 3.2408 (16) | 127 |
C16—H16A···Cg1i | 0.96 | 2.91 | 3.7511 (14) | 147 |
Symmetry code: (i) x−1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C18H20N2O5 |
Mr | 344.36 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 5.5727 (1), 10.8497 (1), 14.2803 (2) |
α, β, γ (°) | 100.911 (1), 96.532 (1), 90.237 (1) |
V (Å3) | 842.01 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.36 × 0.20 × 0.17 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.965, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21972, 4888, 3893 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.103, 1.03 |
No. of reflections | 4888 |
No. of parameters | 229 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.40, −0.23 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16A···O1i | 0.96 | 2.57 | 3.2408 (16) | 127 |
C16—H16A···Cg1i | 0.96 | 2.91 | 3.7511 (14) | 147 |
Symmetry code: (i) x−1, y−1, z. |
Acknowledgements
The authors are grateful to the Ministry of Higher Education (MOHE) and Universiti Teknologi MARA for financial support. HKF and JHG thank Universiti Sains Malaysia (USM) for the Research University Golden Goose grant (No. 1001/PFIZIK/811012). JHG also thanks USM for the award of a USM fellowship.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dysidamide is a novel metabolite from a red sea sponge Lamellodysidea herbacea (Carmely et al., 1990; Manero et al., 2006; Sauleau & Bourguet-Kondracki, 2005). This hexachloro pyrrolidinone metabolite displayed remarkable biological activities such as cytotoxic activity for mesencephalic and cortical murine neuronal cell culture. We have synthesized the title compound with a spiro structure in the ring which is rare in nature, which eventually can be used as a multi-step syntheses of this marine metabolite, dysidamide, and its structure is reported here.
In the title compound (Fig. 1), the pyrrolidine ring (N1/C8–C11) adopts an envelope conformation (Boeyens, 1978; Cremer & Pople, 1975) with puckering parameters of Q = 0.1375 (12) Å and φ = 80.1 (5)°. Atom C9 deviates from the least-square plane through the remaining four atoms by 0.222 (2) Å. In contrast, the pyrrolidine ring is approximately planar in the molecular structure of 3,3-dimethylpyrrolidine-2,4-dione (Hamzah et al., 2006) due to the absence of bulky groups. The dihydroisoxazole ring (C11—C13/N2/O3) is essentially planar, with a maximum deviation of 0.041 (1) Å for atom C11, and a N2–O3–C11–C12 torsion angle of -6.70 (11)°. The benzene ring (C1–C6) forms a dihedral angle of 65.19 (6)° with the dihydroisoxazole ring. Bond lengths (Allen et al., 1987) and angles are within normal ranges.
In the crystal structure (Fig. 2), neighbouring molecules are linked into one-dimensional chains along the [1 1 0] by intermolecular C16—H16A···O1 hydrogen bonds and weak C16—H16A···Cg1 interactions (Table 1).