organic compounds
1-(2-Hydroxy-4,5-dimethoxyphenyl)propan-1-one
aHainan Provincial Key Laboratory of Tropical Pharmaceutical Herb Chemistry, College of Chemistry & Chemical Engineering, Hainan Normal University, Haikou 571158, People's Republic of China
*Correspondence e-mail: chgying123@163.com, hchr116@hainnu.edu.cn
In the title compound, C11H14O4, isolated from the stems of Trigonostemon xyphophylloides, an intramolecular O—H⋯O hydrogen bond helps to establish an essentially planar conformation for the molecule (r.m.s. deviation = 0.044 Å).
Related literature
For botanical and biochemical background, see: Tempeam et al. (2005); Chen et al. (2009). For medicinal applications of this family of compounds, see: Chuakul et al. (1997); Tempeam et al. (2002).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536809041798/hb5121sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809041798/hb5121Isup2.hkl
Air-dried stems of Trigonostemon xyphophylloides (5.9 kg) were ground and percolated (3 × 2.5 h) with 75% EtOH at 333 K, which was suspended in 1.5 l water and then partitioned with petroleum ether, chloroform, ethyl acetate and n-BuOH, successively, yielding a petroleum ether extract, a chloroform extract, an ethyl acetate extract and a n-BuOH extract, respectively. The petroleum ether extract was subjected to a silica gel CC column using petroleum ether as first
and then increasing the polarity with EtOAc, to afford 20 fractions (A—T). Fraction D was further separated by with a gradient of petroleum ether-EtOAc to give the title compound. The crude product was dissolved in small amount of ethyl acetate to obtain colourless blocks of (I) by slow evaporation of ethyl acetate solution at 298 K.H atoms bonded to C atoms were palced in geometrically calculated position and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C). H atoms attached to O atoms were found in a difference Fourier synthesis and were refined using a riding model, with the O—H distances fixed as initially found and with Uiso(H) values set at 1.5 Ueq(O).
Secondary metabolites in the plants of Trigonostemon xyphophylloides are mainly daphnane
phenanthrenones, and (Tempeam et al., 2005; Chen et al., 2009). The plants in this family were used in folk medicine such as an emetic for food poisoning, a laxative and an anti-asthmatic, has also been used in the treatment of bloody and mucous sputum or stool. It was applied to reduce abscesses and to alleviate sprains, swelling and bruizes, is particularly effective in treating snake bites especially against snake neurotoxins. (Chuakul et al., 1997; Tempeam et al., 2002). The title compound was isolated from the 75% EtOH extract of the stems of Trigonostemon xyphophylloides which were collected from Jianfengling County, Hainan Province, P. R. China. We have undertaken the X-ray analysis of the title compound in order to establish its molecular structure and relative stereochemistry.The hydrogen bonds and angles are listed in Table 1.
For botanical and biochemical background, see: Tempeam et al. (2005); Chen et al. (2009). For medicinal applications of this family of compounds, see: Chuakul et al. (1997); Tempeam et al. (2002).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXP-97 (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of (I) with displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. A view of the molecular packing for (I). |
C11H14O4 | F(000) = 448 |
Mr = 210.22 | Dx = 1.294 Mg m−3 |
Monoclinic, P21/c | Melting point: not measured K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1933 (7) Å | Cell parameters from 2673 reflections |
b = 9.4874 (12) Å | θ = 2.5–28.4° |
c = 17.198 (2) Å | µ = 0.10 mm−1 |
β = 113.164 (5)° | T = 293 K |
V = 1079.1 (2) Å3 | Block, colourless |
Z = 4 | 0.31 × 0.16 × 0.14 mm |
Bruker SMART CCD diffractometer | 2673 independent reflections |
Radiation source: fine-focus sealed tube | 1749 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.044 |
ω scans | θmax = 28.4°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −9→9 |
Tmin = 0.066, Tmax = 0.185 | k = −12→12 |
7549 measured reflections | l = −22→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.094 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.295 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.1225P)2 + 1.1131P] where P = (Fo2 + 2Fc2)/3 |
2673 reflections | (Δ/σ)max < 0.001 |
136 parameters | Δρmax = 0.41 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C11H14O4 | V = 1079.1 (2) Å3 |
Mr = 210.22 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.1933 (7) Å | µ = 0.10 mm−1 |
b = 9.4874 (12) Å | T = 293 K |
c = 17.198 (2) Å | 0.31 × 0.16 × 0.14 mm |
β = 113.164 (5)° |
Bruker SMART CCD diffractometer | 2673 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 1749 reflections with I > 2σ(I) |
Tmin = 0.066, Tmax = 0.185 | Rint = 0.044 |
7549 measured reflections |
R[F2 > 2σ(F2)] = 0.094 | 0 restraints |
wR(F2) = 0.295 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.41 e Å−3 |
2673 reflections | Δρmin = −0.28 e Å−3 |
136 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3767 (5) | 0.3553 (3) | 0.52714 (19) | 0.0723 (9) | |
H1 | 0.3323 | 0.3757 | 0.4768 | 0.080* | |
O2 | 0.1907 (5) | 0.3117 (3) | 0.36706 (18) | 0.0763 (9) | |
O3 | 0.2687 (4) | −0.2066 (3) | 0.58386 (15) | 0.0600 (8) | |
O4 | 0.4475 (4) | −0.0386 (3) | 0.71051 (14) | 0.0581 (7) | |
C1 | 0.3465 (5) | 0.2161 (4) | 0.5358 (2) | 0.0497 (8) | |
C2 | 0.2485 (5) | 0.1275 (3) | 0.4653 (2) | 0.0435 (7) | |
C3 | 0.2245 (5) | −0.0169 (4) | 0.48170 (19) | 0.0437 (7) | |
H3 | 0.1624 | −0.0776 | 0.4364 | 0.080* | |
C4 | 0.2907 (5) | −0.0694 (3) | 0.5629 (2) | 0.0432 (7) | |
C5 | 0.3876 (5) | 0.0225 (4) | 0.63263 (19) | 0.0441 (7) | |
C6 | 0.4134 (5) | 0.1631 (4) | 0.6178 (2) | 0.0499 (8) | |
H6 | 0.4764 | 0.2232 | 0.6633 | 0.080* | |
C7 | 0.1702 (5) | 0.1852 (4) | 0.3788 (2) | 0.0509 (8) | |
C8 | 0.0636 (6) | 0.0885 (4) | 0.3045 (2) | 0.0569 (9) | |
H8A | −0.0529 | 0.0476 | 0.3111 | 0.080* | |
H8B | 0.1545 | 0.0120 | 0.3061 | 0.080* | |
C9 | −0.0065 (8) | 0.1589 (5) | 0.2186 (3) | 0.0801 (14) | |
H9A | −0.0699 | 0.0902 | 0.1752 | 0.080* | |
H9B | 0.1077 | 0.1990 | 0.2110 | 0.080* | |
H9C | −0.1017 | 0.2319 | 0.2152 | 0.080* | |
C10 | 0.1800 (6) | −0.3028 (4) | 0.5156 (2) | 0.0600 (10) | |
H10A | 0.1714 | −0.3945 | 0.5376 | 0.080* | |
H10B | 0.2621 | −0.3079 | 0.4831 | 0.080* | |
H10C | 0.0469 | −0.2709 | 0.4801 | 0.080* | |
C11 | 0.5335 (7) | 0.0537 (5) | 0.7830 (2) | 0.0699 (12) | |
H11A | 0.5684 | −0.0003 | 0.8340 | 0.080* | |
H11B | 0.4364 | 0.1246 | 0.7809 | 0.080* | |
H11C | 0.6527 | 0.0980 | 0.7821 | 0.080* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.107 (2) | 0.0456 (15) | 0.0605 (17) | −0.0084 (14) | 0.0294 (16) | −0.0016 (13) |
O2 | 0.115 (3) | 0.0534 (17) | 0.0561 (16) | −0.0070 (16) | 0.0287 (17) | 0.0092 (13) |
O3 | 0.0858 (18) | 0.0402 (13) | 0.0372 (12) | −0.0007 (12) | 0.0062 (12) | 0.0020 (10) |
O4 | 0.0790 (17) | 0.0490 (14) | 0.0347 (12) | −0.0005 (12) | 0.0098 (11) | −0.0045 (10) |
C1 | 0.0556 (19) | 0.0434 (18) | 0.0509 (18) | 0.0009 (15) | 0.0219 (15) | −0.0022 (14) |
C2 | 0.0482 (17) | 0.0395 (16) | 0.0422 (16) | 0.0051 (13) | 0.0170 (13) | −0.0005 (13) |
C3 | 0.0472 (17) | 0.0426 (17) | 0.0377 (15) | 0.0044 (13) | 0.0129 (13) | −0.0046 (13) |
C4 | 0.0444 (16) | 0.0399 (16) | 0.0413 (16) | 0.0072 (13) | 0.0125 (13) | −0.0007 (13) |
C5 | 0.0459 (16) | 0.0452 (17) | 0.0371 (15) | 0.0061 (14) | 0.0120 (12) | −0.0036 (13) |
C6 | 0.0551 (19) | 0.0473 (19) | 0.0437 (17) | 0.0005 (15) | 0.0155 (15) | −0.0091 (14) |
C7 | 0.058 (2) | 0.048 (2) | 0.0461 (18) | 0.0053 (15) | 0.0200 (15) | 0.0048 (15) |
C8 | 0.069 (2) | 0.057 (2) | 0.0405 (17) | 0.0013 (17) | 0.0162 (16) | 0.0066 (15) |
C9 | 0.107 (4) | 0.073 (3) | 0.045 (2) | 0.001 (3) | 0.013 (2) | 0.012 (2) |
C10 | 0.078 (3) | 0.0443 (19) | 0.0439 (18) | 0.0030 (17) | 0.0091 (17) | −0.0015 (15) |
C11 | 0.098 (3) | 0.065 (3) | 0.0358 (17) | −0.002 (2) | 0.0149 (19) | −0.0100 (17) |
O1—C1 | 1.355 (4) | C6—H6 | 0.9300 |
O1—H1 | 0.8200 | C7—C8 | 1.513 (5) |
O2—C7 | 1.235 (4) | C8—C9 | 1.516 (5) |
O3—C4 | 1.376 (4) | C8—H8A | 0.9700 |
O3—C10 | 1.424 (4) | C8—H8B | 0.9700 |
O4—C5 | 1.364 (4) | C9—H9A | 0.9600 |
O4—C11 | 1.448 (4) | C9—H9B | 0.9600 |
C1—C6 | 1.393 (5) | C9—H9C | 0.9600 |
C1—C2 | 1.415 (5) | C10—H10A | 0.9600 |
C2—C3 | 1.423 (5) | C10—H10B | 0.9600 |
C2—C7 | 1.473 (5) | C10—H10C | 0.9600 |
C3—C4 | 1.379 (4) | C11—H11A | 0.9600 |
C3—H3 | 0.9300 | C11—H11B | 0.9600 |
C4—C5 | 1.423 (4) | C11—H11C | 0.9600 |
C5—C6 | 1.385 (5) | ||
C1—O1—H1 | 109.5 | C7—C8—C9 | 114.8 (3) |
C4—O3—C10 | 116.8 (3) | C7—C8—H8A | 108.6 |
C5—O4—C11 | 116.8 (3) | C9—C8—H8A | 108.6 |
O1—C1—C6 | 117.2 (3) | C7—C8—H8B | 108.6 |
O1—C1—C2 | 122.2 (3) | C9—C8—H8B | 108.6 |
C6—C1—C2 | 120.7 (3) | H8A—C8—H8B | 107.5 |
C1—C2—C3 | 117.4 (3) | C8—C9—H9A | 109.5 |
C1—C2—C7 | 120.5 (3) | C8—C9—H9B | 109.5 |
C3—C2—C7 | 122.0 (3) | H9A—C9—H9B | 109.5 |
C4—C3—C2 | 121.9 (3) | C8—C9—H9C | 109.5 |
C4—C3—H3 | 119.1 | H9A—C9—H9C | 109.5 |
C2—C3—H3 | 119.1 | H9B—C9—H9C | 109.5 |
O3—C4—C3 | 125.3 (3) | O3—C10—H10A | 109.5 |
O3—C4—C5 | 115.3 (3) | O3—C10—H10B | 109.5 |
C3—C4—C5 | 119.4 (3) | H10A—C10—H10B | 109.5 |
O4—C5—C6 | 125.2 (3) | O3—C10—H10C | 109.5 |
O4—C5—C4 | 115.3 (3) | H10A—C10—H10C | 109.5 |
C6—C5—C4 | 119.4 (3) | H10B—C10—H10C | 109.5 |
C5—C6—C1 | 121.1 (3) | O4—C11—H11A | 109.5 |
C5—C6—H6 | 119.4 | O4—C11—H11B | 109.5 |
C1—C6—H6 | 119.4 | H11A—C11—H11B | 109.5 |
O2—C7—C2 | 120.2 (3) | O4—C11—H11C | 109.5 |
O2—C7—C8 | 120.3 (3) | H11A—C11—H11C | 109.5 |
C2—C7—C8 | 119.5 (3) | H11B—C11—H11C | 109.5 |
Experimental details
Crystal data | |
Chemical formula | C11H14O4 |
Mr | 210.22 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 7.1933 (7), 9.4874 (12), 17.198 (2) |
β (°) | 113.164 (5) |
V (Å3) | 1079.1 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.31 × 0.16 × 0.14 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.066, 0.185 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7549, 2673, 1749 |
Rint | 0.044 |
(sin θ/λ)max (Å−1) | 0.669 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.094, 0.295, 1.12 |
No. of reflections | 2673 |
No. of parameters | 136 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.28 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXP-97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
This work was supported by the National Natural Science Foundation of China (20862005), the Program for New Century Excellent Talents in Universities (NCET-08–0656), the Natural Science Foundation of Hainan Province (No. 070207) and the University Graduate Student Innovation Science Research Project of Hainan Province (No. Hxwsy2008–17). We thank Bingjing Xin for collecting the crystal data.
References
Bruker (1997). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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Secondary metabolites in the plants of Trigonostemon xyphophylloides are mainly daphnane diterpenoids, phenanthrenones, alkaloids and coumarins (Tempeam et al., 2005; Chen et al., 2009). The plants in this family were used in folk medicine such as an emetic for food poisoning, a laxative and an anti-asthmatic, has also been used in the treatment of bloody and mucous sputum or stool. It was applied to reduce abscesses and to alleviate sprains, swelling and bruizes, is particularly effective in treating snake bites especially against snake neurotoxins. (Chuakul et al., 1997; Tempeam et al., 2002). The title compound was isolated from the 75% EtOH extract of the stems of Trigonostemon xyphophylloides which were collected from Jianfengling County, Hainan Province, P. R. China. We have undertaken the X-ray crystal structure analysis of the title compound in order to establish its molecular structure and relative stereochemistry.
The hydrogen bonds and angles are listed in Table 1.