organic compounds
5,5′-Dimethoxy-2,2′-[(nonane-1,9-diyldioxy)bis(nitrilomethylidyne)]diphenol
aSchool of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou 730070, People's Republic of China, bThe Five TBM, China Railway Tunnel Co. Ltd, Xinxiang 453000, People's Republic of China, and cSchool of Environmental Science and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, People's Republic of China
*Correspondence e-mail: dongwk@126.com
The molecule of the title compound, C25H34N2O6, adopts a fully extended configuration. The oxime (—CH=N—O—) group is coplanar with the aromatic ring and the two benzene rings are almost parallel, making a dihedral angle of 0.16 (3)°. In the strong intramolecular O—H⋯N hydrogen bonds generate six-membered S(6) ring motifs. Intermolecular C—H⋯O hydrogen bonds link each molecule to five others, forming an infinite three-dimensional supramolecular structure. The crystal is further stabilized by π–π stacking interactions between neighbouring benzene rings [centroid–centroid distance = 3.744 (2) Å].
Related literature
For related literature, see: Bernstein et al. (1995); Campbell et al. (2001); Desiraju (1996); Dong, He, Guan et al. (2008); Dong, He, Li et al. (2008); Dong, Li et al. (2008); Dong et al. (2009); Mohand et al. (1995); Sun et al. (2009).
Experimental
Crystal data
|
Refinement
|
Data collection: SMART (Siemens, 1996); cell SMART; data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536809041038/hg2576sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809041038/hg2576Isup2.hkl
5,5'-Dimethoxy-2,2'-[(nonane-1,9-diyldioxy)bis(nitrilomethylidyne)]diphenol was synthesized according to an analogous method reported earlier (Dong et al., 2008c; Dong et al., 2009). To an ethanol solution (5 ml) of 4-methoxy-2-hydroxybenzaldehyde (159.5 mg, 1.05 mmol) was added an ethanol solution (5 ml) of 1,9-bis(aminooxy)nonane (99.0 mg, 0.52 mmol). The reaction mixture was stirred at 328 K for 8 h. The formed precipitate was separated by filtration under reduced pressure, and washed successively with ethanol and ethanol-hexane (1:4), respectively. The product was dried under vacuum to yield 155.4 mg of the title compound. Yield, 32.3%. m. p. 465–467 K. Anal. Calcd. for C25H34N2O6: C, 62.67; H, 6.51; N, 9.96. Found: C, 62.79; H, 6.68; N, 9.83.
Colorless block-like single crystals suitable for X-ray diffraction studies were obtained after about three weeks by slow evaporation from an ethanol solution of the title compound.
Non-H atoms were refined anisotropically. H atoms were treated as riding atoms with distances C—H = 0.96 (CH3), C—H = 0.97 (CH2), 0.93 Å (CH), O—H = 0.82 Å and Uiso(H)= 1.20 1.2 Ueq(C) for methylene and methylidyne, 1.50 Ueq(C) for methyl, 1.50 Ueq(O) for hydroxy.
Schiff bases are one of most important mixed-donor ligands in the field of modern coordination chemistry. They play an important role in the development of coordination chemistry related to biochemistry, synthesis and catalysis (Mohand et al., 1995; Campbell et al., 2001), enzymatic reactions, magnetism, and supramolecular architectures. Our group are interested in the synthesis and structure of salen-type bisoxime compounds formed by Schiff base reactions (Dong et al., 2008a; Dong et al., 2008b). Herein, we report, the synthesis and
of a salen-type bisoxime compound containing nine-methene bridge, 5,5'-dimethoxy-2,2'-[(nonane-1,9-diyldioxy)bis(nitrilomethylidyne)]diphenol.The molecular structure of the title compound, C25H34N2O6, as shown in Fig. 1, adopts a linear configuration, which is similar to our previously reported compound (Sun et al., 2009). In the crystal unit, the oxime (–CH=N—O–) group is coplanar with the aromatic ring and the two benzene rings are approximately parallel, making a dihedral angle of 0.16 (3)°. The bond lengths and angles in the molecule are within normal ranges.
In the π-π stacking interactions between the neighbouring benzene rings (centroid-centroid distances = 3.744 (2) Å) (Fig. 4).
strong intramolecular O—H···N hydrogen bonds generate two six-membered rings, producing S(6) ring motifs (Fig. 1) (Bernstein et al., 1995). Intermolecular C—H···O hydrogen bonds (Fig. 2) link the each molecule to five others, foming an infinite three-dimensional supramolecular structure (Desiraju, 1996) (Fig. 3). The crystal is further stabilized byFor related literature, see: Bernstein et al. (1995); Campbell et al. (2001); Desiraju (1996); Dong, He, Guan et al. (2008); Dong, He, Li et al. (2008); Dong, Li et al. (2008); Dong et al. (2009); Mohand et al. (1995); Sun et al. (2009).
Data collection: SMART (Siemens, 1996); cell
SMART (Siemens, 1996); data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound with atom numbering scheme. Displacement ellipsoids for non-hydrogen atoms are drawn at the 30% probability level. | |
Fig. 2. Part of the supramolecular structure of the title compound. Intra- and intermolecular hydrogen bonds are shown as dashed lines. | |
Fig. 3. Three-dimensional packing diagram of the title compound, showing the layer configuration along b axis. | |
Fig. 4. Part π···π stacking interactions in the title compound (as shown as dashed lines). H atoms not involved in hydrogen bonding have been omitted for clarity. |
C25H34N2O6 | Z = 2 |
Mr = 458.54 | F(000) = 492 |
Triclinic, P1 | Dx = 1.231 Mg m−3 |
Hall symbol: -P 1 | Melting point = 465–467 K |
a = 10.4701 (10) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.1249 (12) Å | Cell parameters from 1465 reflections |
c = 12.7602 (14) Å | θ = 2.2–22.6° |
α = 65.544 (1)° | µ = 0.09 mm−1 |
β = 86.664 (2)° | T = 298 K |
γ = 67.085 (1)° | Block-like, colorless |
V = 1236.7 (2) Å3 | 0.48 × 0.46 × 0.21 mm |
Bruker SMART 1000 CCD area-detector diffractometer | 4303 independent reflections |
Radiation source: fine-focus sealed tube | 2050 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
φ and ω scans | θmax = 25.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→12 |
Tmin = 0.959, Tmax = 0.982 | k = −13→13 |
6463 measured reflections | l = −9→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0355P)2] where P = (Fo2 + 2Fc2)/3 |
4303 reflections | (Δ/σ)max < 0.001 |
300 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C25H34N2O6 | γ = 67.085 (1)° |
Mr = 458.54 | V = 1236.7 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.4701 (10) Å | Mo Kα radiation |
b = 11.1249 (12) Å | µ = 0.09 mm−1 |
c = 12.7602 (14) Å | T = 298 K |
α = 65.544 (1)° | 0.48 × 0.46 × 0.21 mm |
β = 86.664 (2)° |
Bruker SMART 1000 CCD area-detector diffractometer | 4303 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2050 reflections with I > 2σ(I) |
Tmin = 0.959, Tmax = 0.982 | Rint = 0.036 |
6463 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.125 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.16 e Å−3 |
4303 reflections | Δρmin = −0.18 e Å−3 |
300 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.2659 (2) | −0.4795 (2) | 0.60645 (19) | 0.0660 (6) | |
N2 | 0.7314 (2) | 0.4634 (2) | 0.87062 (18) | 0.0634 (6) | |
O1 | 0.34859 (18) | −0.40335 (19) | 0.59502 (16) | 0.0766 (6) | |
O2 | 0.72925 (18) | 0.37983 (19) | 0.81319 (15) | 0.0766 (6) | |
O3 | 0.07937 (17) | −0.58178 (17) | 0.68503 (15) | 0.0769 (6) | |
H3 | 0.1269 | −0.5362 | 0.6794 | 0.115* | |
O4 | 0.02223 (19) | −0.88667 (18) | 0.53611 (16) | 0.0767 (6) | |
O5 | 0.67807 (19) | 0.59846 (18) | 1.00861 (15) | 0.0830 (6) | |
H5 | 0.6699 | 0.5472 | 0.9805 | 0.124* | |
O6 | 0.9436 (2) | 0.87142 (19) | 0.98147 (17) | 0.0857 (6) | |
C1 | 0.3053 (3) | −0.3278 (3) | 0.6680 (2) | 0.0719 (8) | |
H1A | 0.3108 | −0.3948 | 0.7478 | 0.086* | |
H1B | 0.2098 | −0.2567 | 0.6422 | 0.086* | |
C2 | 0.4015 (3) | −0.2568 (3) | 0.6585 (2) | 0.0746 (8) | |
H2A | 0.3948 | −0.1920 | 0.5777 | 0.089* | |
H2B | 0.4963 | −0.3301 | 0.6813 | 0.089* | |
C3 | 0.3762 (3) | −0.1723 (3) | 0.7304 (2) | 0.0681 (8) | |
H3A | 0.2810 | −0.0999 | 0.7097 | 0.082* | |
H3B | 0.3871 | −0.2369 | 0.8119 | 0.082* | |
C4 | 0.4758 (2) | −0.0993 (3) | 0.7122 (2) | 0.0659 (7) | |
H4A | 0.5705 | −0.1727 | 0.7337 | 0.079* | |
H4B | 0.4661 | −0.0374 | 0.6302 | 0.079* | |
C5 | 0.4563 (2) | −0.0103 (2) | 0.7788 (2) | 0.0656 (7) | |
H5A | 0.4717 | −0.0727 | 0.8612 | 0.079* | |
H5B | 0.3605 | 0.0606 | 0.7605 | 0.079* | |
C6 | 0.5536 (3) | 0.0667 (2) | 0.7526 (2) | 0.0660 (7) | |
H6A | 0.6491 | −0.0045 | 0.7689 | 0.079* | |
H6B | 0.5367 | 0.1300 | 0.6703 | 0.079* | |
C7 | 0.5397 (3) | 0.1549 (3) | 0.8196 (2) | 0.0695 (8) | |
H7A | 0.5573 | 0.0922 | 0.9019 | 0.083* | |
H7B | 0.4446 | 0.2269 | 0.8032 | 0.083* | |
C8 | 0.6393 (3) | 0.2293 (3) | 0.7898 (2) | 0.0715 (8) | |
H8A | 0.7337 | 0.1568 | 0.8035 | 0.086* | |
H8B | 0.6196 | 0.2932 | 0.7076 | 0.086* | |
C9 | 0.6336 (3) | 0.3152 (3) | 0.8561 (2) | 0.0728 (8) | |
H9A | 0.5401 | 0.3885 | 0.8445 | 0.087* | |
H9B | 0.6594 | 0.2528 | 0.9384 | 0.087* | |
C10 | 0.2957 (2) | −0.5469 (3) | 0.5419 (2) | 0.0622 (7) | |
H10 | 0.3658 | −0.5407 | 0.4943 | 0.075* | |
C11 | 0.2216 (2) | −0.6325 (2) | 0.5424 (2) | 0.0525 (6) | |
C12 | 0.1170 (2) | −0.6471 (2) | 0.6125 (2) | 0.0510 (6) | |
C13 | 0.0470 (2) | −0.7291 (2) | 0.6116 (2) | 0.0565 (7) | |
H13 | −0.0242 | −0.7359 | 0.6578 | 0.068* | |
C14 | 0.0836 (3) | −0.8008 (2) | 0.5414 (2) | 0.0566 (7) | |
C15 | 0.1875 (3) | −0.7888 (3) | 0.4717 (2) | 0.0669 (8) | |
H15 | 0.2120 | −0.8371 | 0.4243 | 0.080* | |
C16 | 0.2542 (3) | −0.7060 (3) | 0.4726 (2) | 0.0656 (7) | |
H16 | 0.3239 | −0.6983 | 0.4248 | 0.079* | |
C17 | −0.0791 (3) | −0.9095 (3) | 0.6107 (2) | 0.0883 (9) | |
H17A | −0.0392 | −0.9493 | 0.6897 | 0.132* | |
H17B | −0.1096 | −0.9755 | 0.6006 | 0.132* | |
H17C | −0.1575 | −0.8194 | 0.5927 | 0.132* | |
C18 | 0.8248 (3) | 0.5120 (2) | 0.8369 (2) | 0.0580 (7) | |
H18 | 0.8792 | 0.4871 | 0.7829 | 0.070* | |
C19 | 0.8512 (2) | 0.6043 (2) | 0.8781 (2) | 0.0511 (6) | |
C20 | 0.7786 (2) | 0.6443 (3) | 0.9615 (2) | 0.0573 (7) | |
C21 | 0.8074 (3) | 0.7331 (3) | 0.9981 (2) | 0.0632 (7) | |
H21 | 0.7582 | 0.7594 | 1.0537 | 0.076* | |
C22 | 0.9084 (3) | 0.7820 (3) | 0.9523 (2) | 0.0606 (7) | |
C23 | 0.9834 (3) | 0.7427 (3) | 0.8705 (2) | 0.0670 (8) | |
H23 | 1.0532 | 0.7748 | 0.8405 | 0.080* | |
C24 | 0.9532 (3) | 0.6557 (2) | 0.8348 (2) | 0.0617 (7) | |
H24 | 1.0030 | 0.6301 | 0.7792 | 0.074* | |
C25 | 0.8799 (3) | 0.9062 (3) | 1.0714 (3) | 0.1070 (12) | |
H25A | 0.7806 | 0.9555 | 1.0499 | 0.161* | |
H25B | 0.9151 | 0.9673 | 1.0842 | 0.161* | |
H25C | 0.9005 | 0.8193 | 1.1412 | 0.161* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0605 (15) | 0.0674 (15) | 0.0816 (16) | −0.0295 (13) | 0.0040 (13) | −0.0379 (14) |
N2 | 0.0647 (15) | 0.0654 (14) | 0.0738 (15) | −0.0312 (13) | 0.0088 (13) | −0.0376 (13) |
O1 | 0.0729 (13) | 0.0867 (13) | 0.0998 (14) | −0.0434 (11) | 0.0196 (11) | −0.0570 (12) |
O2 | 0.0791 (13) | 0.0933 (14) | 0.0953 (14) | −0.0536 (12) | 0.0278 (12) | −0.0592 (12) |
O3 | 0.0862 (13) | 0.0910 (13) | 0.0914 (13) | −0.0466 (11) | 0.0382 (12) | −0.0665 (12) |
O4 | 0.0870 (14) | 0.0836 (14) | 0.0873 (14) | −0.0448 (12) | 0.0190 (12) | −0.0527 (12) |
O5 | 0.0860 (14) | 0.1028 (15) | 0.0933 (14) | −0.0538 (12) | 0.0403 (12) | −0.0610 (12) |
O6 | 0.1094 (16) | 0.0787 (13) | 0.0937 (15) | −0.0487 (13) | 0.0137 (13) | −0.0494 (12) |
C1 | 0.0660 (19) | 0.0783 (19) | 0.088 (2) | −0.0345 (16) | 0.0122 (17) | −0.0460 (18) |
C2 | 0.0654 (19) | 0.0794 (19) | 0.093 (2) | −0.0348 (17) | 0.0070 (17) | −0.0434 (18) |
C3 | 0.0597 (18) | 0.0706 (18) | 0.084 (2) | −0.0268 (16) | 0.0026 (16) | −0.0405 (17) |
C4 | 0.0593 (18) | 0.0659 (18) | 0.0772 (19) | −0.0237 (15) | −0.0022 (16) | −0.0347 (16) |
C5 | 0.0592 (17) | 0.0637 (17) | 0.0777 (19) | −0.0250 (15) | 0.0034 (15) | −0.0327 (16) |
C6 | 0.0649 (19) | 0.0628 (17) | 0.0726 (19) | −0.0252 (15) | 0.0001 (16) | −0.0303 (16) |
C7 | 0.0700 (19) | 0.0682 (18) | 0.0774 (19) | −0.0329 (16) | 0.0062 (17) | −0.0322 (16) |
C8 | 0.0739 (19) | 0.0740 (18) | 0.0771 (19) | −0.0367 (17) | 0.0091 (16) | −0.0352 (16) |
C9 | 0.075 (2) | 0.0714 (19) | 0.089 (2) | −0.0382 (17) | 0.0162 (18) | −0.0419 (18) |
C10 | 0.0551 (17) | 0.0641 (18) | 0.0634 (18) | −0.0177 (15) | 0.0060 (15) | −0.0289 (16) |
C11 | 0.0466 (16) | 0.0540 (16) | 0.0557 (17) | −0.0151 (14) | 0.0017 (14) | −0.0264 (14) |
C12 | 0.0492 (16) | 0.0474 (15) | 0.0514 (16) | −0.0089 (13) | 0.0013 (14) | −0.0256 (14) |
C13 | 0.0568 (17) | 0.0577 (16) | 0.0588 (17) | −0.0221 (14) | 0.0082 (14) | −0.0292 (15) |
C14 | 0.0582 (17) | 0.0511 (16) | 0.0594 (18) | −0.0185 (14) | 0.0016 (15) | −0.0251 (15) |
C15 | 0.0669 (19) | 0.080 (2) | 0.0701 (19) | −0.0280 (16) | 0.0146 (17) | −0.0486 (17) |
C16 | 0.0576 (18) | 0.0809 (19) | 0.0643 (18) | −0.0245 (16) | 0.0168 (15) | −0.0407 (17) |
C17 | 0.103 (2) | 0.091 (2) | 0.095 (2) | −0.059 (2) | 0.025 (2) | −0.0444 (19) |
C18 | 0.0515 (17) | 0.0588 (17) | 0.0602 (17) | −0.0166 (14) | 0.0030 (15) | −0.0268 (14) |
C19 | 0.0462 (15) | 0.0476 (15) | 0.0546 (16) | −0.0142 (13) | 0.0002 (14) | −0.0208 (14) |
C20 | 0.0490 (16) | 0.0572 (16) | 0.0580 (17) | −0.0191 (14) | 0.0094 (15) | −0.0201 (15) |
C21 | 0.074 (2) | 0.0568 (17) | 0.0601 (17) | −0.0202 (16) | 0.0069 (16) | −0.0315 (15) |
C22 | 0.0676 (19) | 0.0467 (16) | 0.0613 (18) | −0.0192 (15) | −0.0061 (16) | −0.0192 (15) |
C23 | 0.0651 (18) | 0.0658 (18) | 0.077 (2) | −0.0300 (16) | 0.0125 (17) | −0.0332 (17) |
C24 | 0.0611 (18) | 0.0617 (17) | 0.0643 (17) | −0.0230 (15) | 0.0104 (15) | −0.0307 (15) |
C25 | 0.161 (3) | 0.102 (2) | 0.091 (2) | −0.063 (2) | 0.028 (2) | −0.064 (2) |
N1—C10 | 1.280 (3) | C7—H7B | 0.9700 |
N1—O1 | 1.394 (2) | C8—C9 | 1.501 (3) |
N2—C18 | 1.266 (3) | C8—H8A | 0.9700 |
N2—O2 | 1.409 (2) | C8—H8B | 0.9700 |
O1—C1 | 1.443 (3) | C9—H9A | 0.9700 |
O2—C9 | 1.410 (3) | C9—H9B | 0.9700 |
O3—C12 | 1.353 (2) | C10—C11 | 1.441 (3) |
O3—H3 | 0.8200 | C10—H10 | 0.9300 |
O4—C14 | 1.366 (3) | C11—C16 | 1.390 (3) |
O4—C17 | 1.410 (3) | C11—C12 | 1.390 (3) |
O5—C20 | 1.349 (3) | C12—C13 | 1.379 (3) |
O5—H5 | 0.8200 | C13—C14 | 1.377 (3) |
O6—C22 | 1.369 (3) | C13—H13 | 0.9300 |
O6—C25 | 1.410 (3) | C14—C15 | 1.377 (3) |
C1—C2 | 1.476 (3) | C15—C16 | 1.358 (3) |
C1—H1A | 0.9700 | C15—H15 | 0.9300 |
C1—H1B | 0.9700 | C16—H16 | 0.9300 |
C2—C3 | 1.513 (3) | C17—H17A | 0.9600 |
C2—H2A | 0.9700 | C17—H17B | 0.9600 |
C2—H2B | 0.9700 | C17—H17C | 0.9600 |
C3—C4 | 1.509 (3) | C18—C19 | 1.446 (3) |
C3—H3A | 0.9700 | C18—H18 | 0.9300 |
C3—H3B | 0.9700 | C19—C24 | 1.385 (3) |
C4—C5 | 1.504 (3) | C19—C20 | 1.394 (3) |
C4—H4A | 0.9700 | C20—C21 | 1.384 (3) |
C4—H4B | 0.9700 | C21—C22 | 1.367 (3) |
C5—C6 | 1.512 (3) | C21—H21 | 0.9300 |
C5—H5A | 0.9700 | C22—C23 | 1.383 (3) |
C5—H5B | 0.9700 | C23—C24 | 1.366 (3) |
C6—C7 | 1.511 (3) | C23—H23 | 0.9300 |
C6—H6A | 0.9700 | C24—H24 | 0.9300 |
C6—H6B | 0.9700 | C25—H25A | 0.9600 |
C7—C8 | 1.512 (3) | C25—H25B | 0.9600 |
C7—H7A | 0.9700 | C25—H25C | 0.9600 |
C10—N1—O1 | 112.5 (2) | C8—C9—H9A | 110.4 |
C18—N2—O2 | 109.9 (2) | O2—C9—H9B | 110.4 |
N1—O1—C1 | 108.68 (18) | C8—C9—H9B | 110.4 |
N2—O2—C9 | 110.86 (18) | H9A—C9—H9B | 108.6 |
C12—O3—H3 | 109.5 | N1—C10—C11 | 120.6 (2) |
C14—O4—C17 | 118.41 (19) | N1—C10—H10 | 119.7 |
C20—O5—H5 | 109.5 | C11—C10—H10 | 119.7 |
C22—O6—C25 | 117.9 (2) | C16—C11—C12 | 117.1 (2) |
O1—C1—C2 | 106.5 (2) | C16—C11—C10 | 120.6 (2) |
O1—C1—H1A | 110.4 | C12—C11—C10 | 122.3 (2) |
C2—C1—H1A | 110.4 | O3—C12—C13 | 116.9 (2) |
O1—C1—H1B | 110.4 | O3—C12—C11 | 121.6 (2) |
C2—C1—H1B | 110.4 | C13—C12—C11 | 121.5 (2) |
H1A—C1—H1B | 108.6 | C14—C13—C12 | 119.3 (2) |
C1—C2—C3 | 115.4 (2) | C14—C13—H13 | 120.4 |
C1—C2—H2A | 108.4 | C12—C13—H13 | 120.4 |
C3—C2—H2A | 108.4 | O4—C14—C15 | 116.1 (2) |
C1—C2—H2B | 108.4 | O4—C14—C13 | 123.6 (2) |
C3—C2—H2B | 108.4 | C15—C14—C13 | 120.3 (2) |
H2A—C2—H2B | 107.5 | C16—C15—C14 | 119.7 (2) |
C4—C3—C2 | 111.8 (2) | C16—C15—H15 | 120.2 |
C4—C3—H3A | 109.3 | C14—C15—H15 | 120.2 |
C2—C3—H3A | 109.3 | C15—C16—C11 | 122.2 (2) |
C4—C3—H3B | 109.3 | C15—C16—H16 | 118.9 |
C2—C3—H3B | 109.3 | C11—C16—H16 | 118.9 |
H3A—C3—H3B | 107.9 | O4—C17—H17A | 109.5 |
C5—C4—C3 | 115.4 (2) | O4—C17—H17B | 109.5 |
C5—C4—H4A | 108.4 | H17A—C17—H17B | 109.5 |
C3—C4—H4A | 108.4 | O4—C17—H17C | 109.5 |
C5—C4—H4B | 108.4 | H17A—C17—H17C | 109.5 |
C3—C4—H4B | 108.4 | H17B—C17—H17C | 109.5 |
H4A—C4—H4B | 107.5 | N2—C18—C19 | 123.3 (2) |
C4—C5—C6 | 113.3 (2) | N2—C18—H18 | 118.3 |
C4—C5—H5A | 108.9 | C19—C18—H18 | 118.3 |
C6—C5—H5A | 108.9 | C24—C19—C20 | 117.4 (2) |
C4—C5—H5B | 108.9 | C24—C19—C18 | 119.8 (2) |
C6—C5—H5B | 108.9 | C20—C19—C18 | 122.8 (2) |
H5A—C5—H5B | 107.7 | O5—C20—C21 | 118.0 (2) |
C7—C6—C5 | 115.0 (2) | O5—C20—C19 | 121.3 (2) |
C7—C6—H6A | 108.5 | C21—C20—C19 | 120.8 (2) |
C5—C6—H6A | 108.5 | C22—C21—C20 | 119.7 (2) |
C7—C6—H6B | 108.5 | C22—C21—H21 | 120.1 |
C5—C6—H6B | 108.5 | C20—C21—H21 | 120.1 |
H6A—C6—H6B | 107.5 | C21—C22—O6 | 124.4 (3) |
C6—C7—C8 | 112.7 (2) | C21—C22—C23 | 120.8 (2) |
C6—C7—H7A | 109.1 | O6—C22—C23 | 114.8 (3) |
C8—C7—H7A | 109.1 | C24—C23—C22 | 118.7 (3) |
C6—C7—H7B | 109.1 | C24—C23—H23 | 120.7 |
C8—C7—H7B | 109.1 | C22—C23—H23 | 120.7 |
H7A—C7—H7B | 107.8 | C23—C24—C19 | 122.5 (2) |
C9—C8—C7 | 115.3 (2) | C23—C24—H24 | 118.7 |
C9—C8—H8A | 108.4 | C19—C24—H24 | 118.7 |
C7—C8—H8A | 108.4 | O6—C25—H25A | 109.5 |
C9—C8—H8B | 108.4 | O6—C25—H25B | 109.5 |
C7—C8—H8B | 108.4 | H25A—C25—H25B | 109.5 |
H8A—C8—H8B | 107.5 | O6—C25—H25C | 109.5 |
O2—C9—C8 | 106.6 (2) | H25A—C25—H25C | 109.5 |
O2—C9—H9A | 110.4 | H25B—C25—H25C | 109.5 |
C10—N1—O1—C1 | 178.4 (2) | C12—C13—C14—C15 | −1.0 (4) |
C18—N2—O2—C9 | 175.3 (2) | O4—C14—C15—C16 | −179.6 (2) |
N1—O1—C1—C2 | 176.5 (2) | C13—C14—C15—C16 | 0.1 (4) |
O1—C1—C2—C3 | −179.1 (2) | C14—C15—C16—C11 | 0.3 (4) |
C1—C2—C3—C4 | −178.0 (2) | C12—C11—C16—C15 | 0.1 (4) |
C2—C3—C4—C5 | 178.9 (2) | C10—C11—C16—C15 | 179.3 (2) |
C3—C4—C5—C6 | −176.9 (2) | O2—N2—C18—C19 | 178.71 (19) |
C4—C5—C6—C7 | −178.7 (2) | N2—C18—C19—C24 | −178.5 (2) |
C5—C6—C7—C8 | −180.0 (2) | N2—C18—C19—C20 | 2.1 (4) |
C6—C7—C8—C9 | −178.3 (2) | C24—C19—C20—O5 | −179.7 (2) |
N2—O2—C9—C8 | −179.98 (18) | C18—C19—C20—O5 | −0.2 (3) |
C7—C8—C9—O2 | −177.8 (2) | C24—C19—C20—C21 | 0.6 (3) |
O1—N1—C10—C11 | 179.65 (19) | C18—C19—C20—C21 | −179.9 (2) |
N1—C10—C11—C16 | −179.8 (2) | O5—C20—C21—C22 | −179.9 (2) |
N1—C10—C11—C12 | −0.7 (4) | C19—C20—C21—C22 | −0.2 (4) |
C16—C11—C12—O3 | 178.9 (2) | C20—C21—C22—O6 | 179.2 (2) |
C10—C11—C12—O3 | −0.3 (3) | C20—C21—C22—C23 | −0.7 (4) |
C16—C11—C12—C13 | −1.0 (3) | C25—O6—C22—C21 | 5.4 (4) |
C10—C11—C12—C13 | 179.8 (2) | C25—O6—C22—C23 | −174.7 (2) |
O3—C12—C13—C14 | −178.4 (2) | C21—C22—C23—C24 | 1.1 (4) |
C11—C12—C13—C14 | 1.5 (3) | O6—C22—C23—C24 | −178.8 (2) |
C17—O4—C14—C15 | 176.3 (2) | C22—C23—C24—C19 | −0.6 (4) |
C17—O4—C14—C13 | −3.4 (3) | C20—C19—C24—C23 | −0.2 (3) |
C12—C13—C14—O4 | 178.7 (2) | C18—C19—C24—C23 | −179.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17B···O4i | 0.96 | 2.68 | 3.369 (3) | 129 |
C18—H18···O3ii | 0.93 | 2.40 | 3.295 (3) | 160 |
C25—H25C···O3iii | 0.96 | 2.59 | 3.541 (4) | 170 |
C25—H25B···O6iv | 0.96 | 2.61 | 3.469 (4) | 150 |
O3—H3···N1 | 0.82 | 1.86 | 2.583 (4) | 147 |
O5—H5···N2 | 0.82 | 1.94 | 2.663 (4) | 147 |
Symmetry codes: (i) −x, −y−2, −z+1; (ii) x+1, y+1, z; (iii) −x+1, −y, −z+2; (iv) −x+2, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C25H34N2O6 |
Mr | 458.54 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 10.4701 (10), 11.1249 (12), 12.7602 (14) |
α, β, γ (°) | 65.544 (1), 86.664 (2), 67.085 (1) |
V (Å3) | 1236.7 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.48 × 0.46 × 0.21 |
Data collection | |
Diffractometer | Bruker SMART 1000 CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.959, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6463, 4303, 2050 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.125, 1.05 |
No. of reflections | 4303 |
No. of parameters | 300 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.18 |
Computer programs: SMART (Siemens, 1996), SAINT (Siemens, 1996), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17B···O4i | 0.96 | 2.68 | 3.369 (3) | 129.1 |
C18—H18···O3ii | 0.93 | 2.40 | 3.295 (3) | 160.4 |
C25—H25C···O3iii | 0.96 | 2.59 | 3.541 (4) | 170.1 |
C25—H25B···O6iv | 0.96 | 2.61 | 3.469 (4) | 149.8 |
O3—H3···N1 | 0.820 | 1.858 | 2.583 (4) | 146.69 |
O5—H5···N2 | 0.820 | 1.939 | 2.663 (4) | 146.83 |
Symmetry codes: (i) −x, −y−2, −z+1; (ii) x+1, y+1, z; (iii) −x+1, −y, −z+2; (iv) −x+2, −y+2, −z+2. |
Acknowledgements
This work was supported by the Foundation of the Education Department of Gansu Province (grant No. 0904-11) and the `Jing Lan' Talent Engineering Funds of Lanzhou Jiaotong University, which are gratefully acknowledged.
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Campbell, E. J., Zhou, H. & Nguyen, S. T. (2001). Org. Lett. 3, 2391–2393. Web of Science CrossRef PubMed CAS Google Scholar
Desiraju, G. R. (1996). Acc. Chem. Res. 29, 441–449. CrossRef CAS PubMed Web of Science Google Scholar
Dong, W.-K., He, X.-N., Guan, Y.-H., Xu, L. & Ren, Z.-L. (2008). Acta Cryst. E64, o1600–o1601. Web of Science CSD CrossRef IUCr Journals Google Scholar
Dong, W.-K., He, X.-N., Li, L., Lv, Z.-W. & Tong, J.-F. (2008). Acta Cryst. E64, o1405. Web of Science CSD CrossRef IUCr Journals Google Scholar
Dong, W.-K., Li, L., Li, C.-F., Xu, L. & Duan, J.-G. (2008). Spectrochim. Acta Part A, 71, 650–654. CrossRef Google Scholar
Dong, W.-K., Sun, Y.-X., Zhang, Y.-P., Li, L., He, X.-N. & Tang, X.-L. (2009). Inorg. Chim. Acta, 362, 117–124. Web of Science CSD CrossRef CAS Google Scholar
Mohand, S. A., Levina, A. & Muzart, J. (1995). J. Chem. Res. (S), 25, 2051–2058. CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Siemens (1996). SMART and SAINT. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA. Google Scholar
Sun, Y.-X., Li, L., Dong, W.-K., Wu, J.-C. & Tong, J.-F. (2009). Acta Cryst. E65, o1160. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Schiff bases are one of most important mixed-donor ligands in the field of modern coordination chemistry. They play an important role in the development of coordination chemistry related to biochemistry, synthesis and catalysis (Mohand et al., 1995; Campbell et al., 2001), enzymatic reactions, magnetism, and supramolecular architectures. Our group are interested in the synthesis and structure of salen-type bisoxime compounds formed by Schiff base reactions (Dong et al., 2008a; Dong et al., 2008b). Herein, we report, the synthesis and crystal structure of a salen-type bisoxime compound containing nine-methene bridge, 5,5'-dimethoxy-2,2'-[(nonane-1,9-diyldioxy)bis(nitrilomethylidyne)]diphenol.
The molecular structure of the title compound, C25H34N2O6, as shown in Fig. 1, adopts a linear configuration, which is similar to our previously reported compound (Sun et al., 2009). In the crystal unit, the oxime (–CH=N—O–) group is coplanar with the aromatic ring and the two benzene rings are approximately parallel, making a dihedral angle of 0.16 (3)°. The bond lengths and angles in the molecule are within normal ranges.
In the crystal structure, strong intramolecular O—H···N hydrogen bonds generate two six-membered rings, producing S(6) ring motifs (Fig. 1) (Bernstein et al., 1995). Intermolecular C—H···O hydrogen bonds (Fig. 2) link the each molecule to five others, foming an infinite three-dimensional supramolecular structure (Desiraju, 1996) (Fig. 3). The crystal is further stabilized by π-π stacking interactions between the neighbouring benzene rings (centroid-centroid distances = 3.744 (2) Å) (Fig. 4).