organic compounds
Diethyl 2,2′-[(5-dimethylamino-1-naphthyl)sulfonylimino]diacetate
aSchool of Chemical and Materials Engineering, Huangshi Institute of Technology, Huangshi 435003, People's Republic of China
*Correspondence e-mail: zy0340907@yahoo.com.cn
In the title compound, C20H26N2O6S, the N atom of the dimethylamino group is displaced by 0.113 (2) Å from the plane of the naphthalene ring system. The two ethoxy groups adopt zigzag conformations. In the weak intermolecular C—H⋯O hydrogen bonds link the molecules, forming a three-dimensional network. Both ethyl groups are disordered over two sites with the ratios of refined occupancies being 0.857 (16):0.143 (16) and 0.517 (14):0.483 (14).
Related literature
For applications of ligands containing the 5-(dimethylamino) naphthalene-1-sulfonyl (dansyl) group, see: Corradini et al. (1997); Christoforou et al. (2006); Zhang et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
https://doi.org/10.1107/S1600536809041476/lh2912sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809041476/lh2912Isup2.hkl
Diethyl iminodiacetate(0.38 g, 2 mmol) was added to a stirred solution of dansyl chloride(0.27 g, 1 mmol) in dry acetonitrile(40 ml). The reaction mixture was allowed to stir for 12 hr at 353 K. The progress of the reaction was monitored by TLC, untill the completion of reaction. The solvent was evaporated and the residue was purified by
(hexane-ethyl acetate,1:5 v/v) to afford the title compound as a yellow solid. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in ethyl acetate at room temperature.Both the C15/C16 and C18/C19 ethyl groups are disordered over two positions with the final refined occupancies of 0.857 (16):0.143 (16) and 0.517 (14):0.483 (14) for the major and minor components, respectively. In the
commands 'DFIX' and 'SADI' were used (Sheldrick, 2008). Some B-level alert using PLATON were resulted from the disorder.All H atoms were placed in idealized positions [C–H=0.96 Å (methyl), 0.97Å (methylene) and 0.93 Å (aromatic)] and included in the
in the riding-model approximation, with Uiso(H)= 1.5Ueq(methyl C) and 1.2Ueq(methylene and aromatic C).Dansyl (5-(dimethylamino)naphthalene-1-sulfonyl) derivatives are of considerable interest because of their good fluorescent properties. Many fluorescent ligands bearing dansyl group have been reported in recent years (e.g. Corradini et al., 1997; Christoforou et al., 2006; Zhang et al., 2009). We are interested in preparing fluorescent ligands that are expected to bind to hydrophobic sites in proteins or membranes. With this in mind, the title compound, (I), was prepared and we report herein the crystal stucture.
In the molecular structure (Fig. 1), the N atom of the dimethylamino group is displaced by 0.113 (2) Å from the plane of the naphthalene ring system. The two ethoxycarbonyl groups adopt coiled conformations with C14—O4—C15—C16 and C18—O6—C119—C20 torsion angles of 90.1 (10)° and 159.6 (9)°, respectively. All bond lengths and bond angles are as expected. In the
(Fig.2) weak intermolecular C—H···O hydrogen bonds lead to the formation of a three-dimension network.For applications of ligands containing the 5-(dimethylamino) naphthalene-1-sulfonyl (dansyl) group, see: Corradini et al. (1997); Christoforou et al. (2006); Zhang et al. (2009).
Data collection: SMART (Bruker, 2007); cell
SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C20H26N2O6S | F(000) = 896 |
Mr = 422.49 | Dx = 1.311 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7099 reflections |
a = 13.1266 (9) Å | θ = 2.4–27.8° |
b = 8.4592 (5) Å | µ = 0.19 mm−1 |
c = 19.3206 (12) Å | T = 298 K |
β = 93.530 (1)° | Block, yellow |
V = 2141.3 (2) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 4201 independent reflections |
Radiation source: fine-focus sealed tube | 3705 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.040 |
φ and ω scans | θmax = 26.0°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −15→16 |
Tmin = 0.970, Tmax = 0.981 | k = −10→10 |
16359 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0753P)2 + 0.7093P] where P = (Fo2 + 2Fc2)/3 |
4201 reflections | (Δ/σ)max < 0.001 |
306 parameters | Δρmax = 0.35 e Å−3 |
12 restraints | Δρmin = −0.27 e Å−3 |
C20H26N2O6S | V = 2141.3 (2) Å3 |
Mr = 422.49 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.1266 (9) Å | µ = 0.19 mm−1 |
b = 8.4592 (5) Å | T = 298 K |
c = 19.3206 (12) Å | 0.20 × 0.20 × 0.20 mm |
β = 93.530 (1)° |
Bruker SMART CCD diffractometer | 4201 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3705 reflections with I > 2σ(I) |
Tmin = 0.970, Tmax = 0.981 | Rint = 0.040 |
16359 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 12 restraints |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.35 e Å−3 |
4201 reflections | Δρmin = −0.27 e Å−3 |
306 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.95264 (17) | 0.5912 (3) | 0.37909 (11) | 0.0578 (5) | |
C2 | 1.02352 (18) | 0.4871 (3) | 0.35796 (14) | 0.0715 (7) | |
H2 | 1.0911 | 0.4969 | 0.3750 | 0.086* | |
C3 | 0.99669 (18) | 0.3659 (3) | 0.31122 (15) | 0.0737 (7) | |
H3 | 1.0466 | 0.2959 | 0.2981 | 0.088* | |
C4 | 0.89929 (16) | 0.3482 (3) | 0.28453 (13) | 0.0622 (6) | |
H4 | 0.8836 | 0.2689 | 0.2523 | 0.075* | |
C5 | 0.82149 (15) | 0.4499 (2) | 0.30558 (10) | 0.0466 (4) | |
C6 | 0.71621 (15) | 0.4373 (2) | 0.28232 (10) | 0.0446 (4) | |
C7 | 0.64297 (16) | 0.5326 (2) | 0.30780 (11) | 0.0522 (5) | |
H7 | 0.5752 | 0.5227 | 0.2912 | 0.063* | |
C8 | 0.67007 (17) | 0.6443 (3) | 0.35867 (12) | 0.0588 (5) | |
H8 | 0.6200 | 0.7065 | 0.3771 | 0.071* | |
C9 | 0.76932 (17) | 0.6628 (3) | 0.38138 (12) | 0.0575 (5) | |
H9 | 0.7861 | 0.7382 | 0.4153 | 0.069* | |
C10 | 0.84776 (15) | 0.5708 (2) | 0.35492 (10) | 0.0490 (5) | |
C11 | 0.9684 (3) | 0.8725 (4) | 0.39713 (18) | 0.0941 (10) | |
H11A | 1.0269 | 0.8936 | 0.3712 | 0.141* | |
H11B | 0.9651 | 0.9487 | 0.4337 | 0.141* | |
H11C | 0.9076 | 0.8794 | 0.3669 | 0.141* | |
C12 | 1.0732 (2) | 0.6972 (5) | 0.46859 (16) | 0.0957 (10) | |
H12A | 1.0791 | 0.5906 | 0.4854 | 0.144* | |
H12B | 1.0742 | 0.7688 | 0.5072 | 0.144* | |
H12C | 1.1293 | 0.7203 | 0.4406 | 0.144* | |
C13 | 0.59995 (17) | 0.1130 (3) | 0.32052 (11) | 0.0548 (5) | |
H13A | 0.5668 | 0.0108 | 0.3159 | 0.066* | |
H13B | 0.5478 | 0.1937 | 0.3136 | 0.066* | |
C14 | 0.64919 (19) | 0.1283 (3) | 0.39272 (12) | 0.0588 (5) | |
C15 | 0.6061 (8) | 0.1733 (7) | 0.5102 (2) | 0.0874 (19) | 0.857 (16) |
H15A | 0.6740 | 0.1337 | 0.5230 | 0.105* | 0.857 (16) |
H15B | 0.5583 | 0.1241 | 0.5399 | 0.105* | 0.857 (16) |
C16 | 0.6032 (10) | 0.3472 (8) | 0.5176 (3) | 0.149 (4) | 0.857 (16) |
H16A | 0.6565 | 0.3935 | 0.4925 | 0.223* | 0.857 (16) |
H16B | 0.6128 | 0.3748 | 0.5658 | 0.223* | 0.857 (16) |
H16C | 0.5383 | 0.3861 | 0.4994 | 0.223* | 0.857 (16) |
C17 | 0.73411 (17) | −0.0060 (3) | 0.24933 (12) | 0.0552 (5) | |
H17A | 0.7484 | −0.0699 | 0.2905 | 0.066* | |
H17B | 0.7988 | 0.0315 | 0.2339 | 0.066* | |
C18 | 0.68302 (16) | −0.1075 (2) | 0.19336 (11) | 0.0520 (5) | |
C19 | 0.7087 (7) | −0.2942 (12) | 0.1072 (5) | 0.073 (3) | 0.517 (14) |
H19A | 0.6722 | −0.2204 | 0.0762 | 0.088* | 0.517 (14) |
H19B | 0.6624 | −0.3784 | 0.1185 | 0.088* | 0.517 (14) |
C20 | 0.8001 (6) | −0.3609 (15) | 0.0734 (5) | 0.100 (3) | 0.517 (14) |
H20A | 0.8432 | −0.2759 | 0.0600 | 0.150* | 0.517 (14) |
H20B | 0.7776 | −0.4207 | 0.0331 | 0.150* | 0.517 (14) |
H20C | 0.8378 | −0.4285 | 0.1057 | 0.150* | 0.517 (14) |
C15' | 0.626 (2) | 0.223 (5) | 0.4978 (12) | 0.069 (9) | 0.143 (16) |
H15C | 0.6659 | 0.3117 | 0.4825 | 0.083* | 0.143 (16) |
H15D | 0.6711 | 0.1531 | 0.5253 | 0.083* | 0.143 (16) |
C16' | 0.539 (3) | 0.281 (6) | 0.5403 (16) | 0.122 (14) | 0.143 (16) |
H16D | 0.5088 | 0.3735 | 0.5189 | 0.182* | 0.143 (16) |
H16E | 0.5652 | 0.3060 | 0.5864 | 0.182* | 0.143 (16) |
H16F | 0.4883 | 0.1993 | 0.5421 | 0.182* | 0.143 (16) |
C19' | 0.7221 (11) | −0.3420 (9) | 0.1268 (4) | 0.069 (3) | 0.483 (14) |
H19C | 0.6507 | −0.3697 | 0.1290 | 0.083* | 0.483 (14) |
H19D | 0.7638 | −0.4342 | 0.1382 | 0.083* | 0.483 (14) |
C20' | 0.7438 (12) | −0.2768 (12) | 0.0564 (4) | 0.101 (4) | 0.483 (14) |
H20D | 0.7039 | −0.1831 | 0.0474 | 0.152* | 0.483 (14) |
H20E | 0.7263 | −0.3544 | 0.0215 | 0.152* | 0.483 (14) |
H20F | 0.8150 | −0.2515 | 0.0556 | 0.152* | 0.483 (14) |
N1 | 0.97658 (16) | 0.7153 (3) | 0.42652 (11) | 0.0706 (6) | |
N2 | 0.67264 (13) | 0.1287 (2) | 0.26716 (9) | 0.0524 (4) | |
O1 | 0.74296 (13) | 0.2660 (2) | 0.16995 (8) | 0.0631 (4) | |
O2 | 0.56924 (12) | 0.3303 (2) | 0.20057 (8) | 0.0635 (4) | |
O3 | 0.73809 (15) | 0.1308 (3) | 0.40732 (10) | 0.0988 (7) | |
O4 | 0.57813 (15) | 0.1376 (3) | 0.43757 (9) | 0.0934 (7) | |
O5 | 0.59653 (12) | −0.0973 (2) | 0.17180 (10) | 0.0751 (5) | |
O6 | 0.74949 (13) | −0.2111 (2) | 0.17216 (11) | 0.0783 (6) | |
S1 | 0.67202 (4) | 0.28980 (6) | 0.22222 (3) | 0.04759 (18) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0469 (12) | 0.0728 (14) | 0.0531 (12) | −0.0099 (10) | −0.0019 (9) | 0.0004 (10) |
C2 | 0.0377 (12) | 0.0952 (19) | 0.0807 (17) | −0.0057 (12) | −0.0047 (11) | −0.0049 (14) |
C3 | 0.0409 (12) | 0.0834 (18) | 0.0969 (19) | 0.0088 (12) | 0.0039 (12) | −0.0136 (15) |
C4 | 0.0439 (12) | 0.0645 (13) | 0.0783 (15) | 0.0032 (10) | 0.0028 (10) | −0.0126 (12) |
C5 | 0.0390 (10) | 0.0492 (10) | 0.0516 (11) | −0.0017 (8) | 0.0024 (8) | 0.0026 (9) |
C6 | 0.0416 (10) | 0.0439 (10) | 0.0479 (10) | −0.0013 (8) | −0.0012 (8) | 0.0002 (8) |
C7 | 0.0409 (11) | 0.0525 (11) | 0.0625 (12) | 0.0024 (9) | −0.0020 (9) | −0.0013 (10) |
C8 | 0.0492 (12) | 0.0585 (12) | 0.0691 (14) | 0.0070 (10) | 0.0073 (10) | −0.0115 (11) |
C9 | 0.0574 (13) | 0.0585 (12) | 0.0567 (12) | −0.0042 (10) | 0.0027 (10) | −0.0115 (10) |
C10 | 0.0433 (11) | 0.0553 (11) | 0.0481 (11) | −0.0033 (9) | −0.0003 (8) | 0.0032 (9) |
C11 | 0.094 (2) | 0.086 (2) | 0.100 (2) | −0.0227 (17) | −0.0109 (18) | −0.0207 (18) |
C12 | 0.0681 (18) | 0.139 (3) | 0.0770 (18) | −0.0235 (18) | −0.0197 (14) | −0.0136 (18) |
C13 | 0.0504 (12) | 0.0551 (12) | 0.0586 (12) | −0.0068 (9) | 0.0010 (9) | −0.0018 (10) |
C14 | 0.0591 (14) | 0.0581 (13) | 0.0587 (13) | 0.0007 (11) | 0.0002 (11) | −0.0021 (10) |
C15 | 0.106 (4) | 0.108 (4) | 0.048 (2) | 0.013 (3) | 0.008 (2) | 0.010 (2) |
C16 | 0.252 (12) | 0.115 (4) | 0.075 (3) | 0.068 (5) | −0.026 (4) | −0.014 (3) |
C17 | 0.0509 (12) | 0.0492 (11) | 0.0642 (13) | 0.0078 (9) | −0.0064 (10) | −0.0050 (9) |
C18 | 0.0450 (12) | 0.0507 (11) | 0.0612 (12) | −0.0067 (9) | 0.0104 (9) | −0.0046 (9) |
C19 | 0.070 (4) | 0.055 (5) | 0.093 (7) | 0.002 (4) | −0.003 (5) | −0.027 (5) |
C20 | 0.091 (5) | 0.108 (7) | 0.103 (5) | 0.003 (4) | 0.019 (4) | −0.038 (5) |
C15' | 0.078 (16) | 0.09 (2) | 0.044 (12) | 0.002 (13) | 0.007 (11) | 0.002 (13) |
C16' | 0.11 (3) | 0.13 (3) | 0.12 (2) | 0.04 (2) | −0.006 (19) | 0.01 (2) |
C19' | 0.092 (7) | 0.044 (4) | 0.074 (4) | −0.011 (4) | 0.018 (4) | −0.005 (3) |
C20' | 0.153 (11) | 0.085 (6) | 0.067 (4) | −0.032 (6) | 0.025 (5) | −0.010 (4) |
N1 | 0.0575 (12) | 0.0899 (16) | 0.0630 (12) | −0.0152 (11) | −0.0086 (9) | −0.0105 (11) |
N2 | 0.0545 (10) | 0.0458 (9) | 0.0570 (10) | 0.0032 (8) | 0.0041 (8) | −0.0042 (8) |
O1 | 0.0666 (10) | 0.0730 (10) | 0.0499 (8) | 0.0011 (8) | 0.0046 (7) | −0.0043 (7) |
O2 | 0.0521 (9) | 0.0667 (9) | 0.0688 (10) | 0.0086 (7) | −0.0194 (7) | −0.0052 (8) |
O3 | 0.0622 (12) | 0.161 (2) | 0.0711 (12) | 0.0146 (13) | −0.0128 (9) | −0.0102 (13) |
O4 | 0.0767 (13) | 0.1434 (19) | 0.0607 (11) | −0.0036 (13) | 0.0095 (9) | −0.0127 (12) |
O5 | 0.0455 (9) | 0.0878 (12) | 0.0910 (12) | −0.0035 (8) | −0.0051 (8) | −0.0257 (10) |
O6 | 0.0566 (10) | 0.0703 (11) | 0.1090 (14) | −0.0017 (8) | 0.0126 (9) | −0.0396 (10) |
S1 | 0.0445 (3) | 0.0501 (3) | 0.0474 (3) | 0.0023 (2) | −0.0045 (2) | −0.0020 (2) |
C1—C2 | 1.362 (4) | C15—H15A | 0.9700 |
C1—N1 | 1.416 (3) | C15—H15B | 0.9700 |
C1—C10 | 1.437 (3) | C16—H16A | 0.9600 |
C2—C3 | 1.397 (4) | C16—H16B | 0.9600 |
C2—H2 | 0.9300 | C16—H16C | 0.9600 |
C3—C4 | 1.357 (3) | C17—N2 | 1.450 (3) |
C3—H3 | 0.9300 | C17—C18 | 1.506 (3) |
C4—C5 | 1.414 (3) | C17—H17A | 0.9700 |
C4—H4 | 0.9300 | C17—H17B | 0.9700 |
C5—C10 | 1.426 (3) | C18—O5 | 1.188 (3) |
C5—C6 | 1.431 (3) | C18—O6 | 1.319 (3) |
C6—C7 | 1.369 (3) | C19—O6 | 1.509 (7) |
C6—S1 | 1.777 (2) | C19—C20 | 1.510 (8) |
C7—C8 | 1.394 (3) | C19—H19A | 0.9700 |
C7—H7 | 0.9300 | C19—H19B | 0.9700 |
C8—C9 | 1.358 (3) | C20—H20A | 0.9600 |
C8—H8 | 0.9300 | C20—H20B | 0.9600 |
C9—C10 | 1.412 (3) | C20—H20C | 0.9600 |
C9—H9 | 0.9300 | C15'—O4 | 1.477 (10) |
C11—N1 | 1.447 (4) | C15'—C16' | 1.529 (10) |
C11—H11A | 0.9600 | C15'—H15C | 0.9700 |
C11—H11B | 0.9600 | C15'—H15D | 0.9700 |
C11—H11C | 0.9600 | C16'—H16D | 0.9600 |
C12—N1 | 1.472 (3) | C16'—H16E | 0.9600 |
C12—H12A | 0.9600 | C16'—H16F | 0.9600 |
C12—H12B | 0.9600 | C19'—O6 | 1.444 (8) |
C12—H12C | 0.9600 | C19'—C20' | 1.511 (8) |
C13—N2 | 1.453 (3) | C19'—H19C | 0.9700 |
C13—C14 | 1.506 (3) | C19'—H19D | 0.9700 |
C13—H13A | 0.9700 | C20'—H20D | 0.9600 |
C13—H13B | 0.9700 | C20'—H20E | 0.9600 |
C14—O3 | 1.184 (3) | C20'—H20F | 0.9600 |
C14—O4 | 1.314 (3) | N2—S1 | 1.6160 (18) |
C15—O4 | 1.460 (5) | O1—S1 | 1.4295 (17) |
C15—C16 | 1.478 (7) | O2—S1 | 1.4292 (15) |
C2—C1—N1 | 123.0 (2) | H15A—C15—H15B | 108.6 |
C2—C1—C10 | 118.9 (2) | N2—C17—C18 | 112.89 (18) |
N1—C1—C10 | 118.0 (2) | N2—C17—H17A | 109.0 |
C1—C2—C3 | 121.2 (2) | C18—C17—H17A | 109.0 |
C1—C2—H2 | 119.4 | N2—C17—H17B | 109.0 |
C3—C2—H2 | 119.4 | C18—C17—H17B | 109.0 |
C4—C3—C2 | 121.4 (2) | H17A—C17—H17B | 107.8 |
C4—C3—H3 | 119.3 | O5—C18—O6 | 125.1 (2) |
C2—C3—H3 | 119.3 | O5—C18—C17 | 125.7 (2) |
C3—C4—C5 | 120.2 (2) | O6—C18—C17 | 109.14 (19) |
C3—C4—H4 | 119.9 | O6—C19—C20 | 106.4 (6) |
C5—C4—H4 | 119.9 | O6—C19—H19A | 110.4 |
C4—C5—C10 | 118.66 (19) | C20—C19—H19A | 110.4 |
C4—C5—C6 | 124.39 (19) | O6—C19—H19B | 110.4 |
C10—C5—C6 | 116.92 (18) | C20—C19—H19B | 110.4 |
C7—C6—C5 | 121.96 (18) | H19A—C19—H19B | 108.6 |
C7—C6—S1 | 116.10 (15) | O4—C15'—C16' | 106.3 (13) |
C5—C6—S1 | 121.85 (15) | O4—C15'—H15C | 110.5 |
C6—C7—C8 | 119.89 (19) | C16'—C15'—H15C | 110.5 |
C6—C7—H7 | 120.1 | O4—C15'—H15D | 110.5 |
C8—C7—H7 | 120.1 | C16'—C15'—H15D | 110.5 |
C9—C8—C7 | 120.3 (2) | H15C—C15'—H15D | 108.7 |
C9—C8—H8 | 119.9 | C15'—C16'—H16D | 109.5 |
C7—C8—H8 | 119.9 | C15'—C16'—H16E | 109.5 |
C8—C9—C10 | 121.7 (2) | H16D—C16'—H16E | 109.5 |
C8—C9—H9 | 119.1 | C15'—C16'—H16F | 109.5 |
C10—C9—H9 | 119.1 | H16D—C16'—H16F | 109.5 |
C9—C10—C5 | 119.07 (18) | H16E—C16'—H16F | 109.5 |
C9—C10—C1 | 121.5 (2) | O6—C19'—C20' | 102.3 (6) |
C5—C10—C1 | 119.39 (19) | O6—C19'—H19C | 111.3 |
N1—C11—H11A | 109.5 | C20'—C19'—H19C | 111.3 |
N1—C11—H11B | 109.5 | O6—C19'—H19D | 111.3 |
H11A—C11—H11B | 109.5 | C20'—C19'—H19D | 111.3 |
N1—C11—H11C | 109.5 | H19C—C19'—H19D | 109.2 |
H11A—C11—H11C | 109.5 | C19'—C20'—H20D | 109.5 |
H11B—C11—H11C | 109.5 | C19'—C20'—H20E | 109.5 |
N1—C12—H12A | 109.5 | H20D—C20'—H20E | 109.5 |
N1—C12—H12B | 109.5 | C19'—C20'—H20F | 109.5 |
H12A—C12—H12B | 109.5 | H20D—C20'—H20F | 109.5 |
N1—C12—H12C | 109.5 | H20E—C20'—H20F | 109.5 |
H12A—C12—H12C | 109.5 | C1—N1—C11 | 114.8 (2) |
H12B—C12—H12C | 109.5 | C1—N1—C12 | 115.4 (2) |
N2—C13—C14 | 112.71 (18) | C11—N1—C12 | 110.7 (2) |
N2—C13—H13A | 109.0 | C17—N2—C13 | 119.76 (18) |
C14—C13—H13A | 109.0 | C17—N2—S1 | 121.31 (15) |
N2—C13—H13B | 109.0 | C13—N2—S1 | 118.44 (14) |
C14—C13—H13B | 109.0 | C14—O4—C15 | 120.0 (4) |
H13A—C13—H13B | 107.8 | C14—O4—C15' | 105.2 (9) |
O3—C14—O4 | 124.8 (2) | C18—O6—C19' | 123.6 (6) |
O3—C14—C13 | 125.6 (2) | C18—O6—C19 | 111.1 (4) |
O4—C14—C13 | 109.5 (2) | O2—S1—O1 | 118.12 (10) |
O4—C15—C16 | 107.0 (4) | O2—S1—N2 | 109.44 (10) |
O4—C15—H15A | 110.3 | O1—S1—N2 | 106.18 (9) |
C16—C15—H15A | 110.3 | O2—S1—C6 | 106.70 (9) |
O4—C15—H15B | 110.3 | O1—S1—C6 | 111.09 (10) |
C16—C15—H15B | 110.3 | N2—S1—C6 | 104.51 (9) |
N1—C1—C2—C3 | 179.8 (2) | C18—C17—N2—C13 | 88.7 (2) |
C10—C1—C2—C3 | 2.7 (4) | C18—C17—N2—S1 | −83.1 (2) |
C1—C2—C3—C4 | 0.7 (4) | C14—C13—N2—C17 | 81.6 (2) |
C2—C3—C4—C5 | −2.2 (4) | C14—C13—N2—S1 | −106.41 (19) |
C3—C4—C5—C10 | 0.2 (4) | O3—C14—O4—C15 | 8.1 (5) |
C3—C4—C5—C6 | −177.7 (2) | C13—C14—O4—C15 | −172.2 (3) |
C4—C5—C6—C7 | 175.7 (2) | O3—C14—O4—C15' | 26 (2) |
C10—C5—C6—C7 | −2.3 (3) | C13—C14—O4—C15' | −155 (2) |
C4—C5—C6—S1 | −0.8 (3) | C16—C15—O4—C14 | 90.1 (10) |
C10—C5—C6—S1 | −178.75 (15) | C16—C15—O4—C15' | 39 (4) |
C5—C6—C7—C8 | −1.0 (3) | C16'—C15'—O4—C14 | 163 (3) |
S1—C6—C7—C8 | 175.69 (17) | C16'—C15'—O4—C15 | −62 (3) |
C6—C7—C8—C9 | 2.2 (3) | O5—C18—O6—C19' | −9.6 (5) |
C7—C8—C9—C10 | −0.2 (4) | C17—C18—O6—C19' | 170.0 (4) |
C8—C9—C10—C5 | −3.2 (3) | O5—C18—O6—C19 | 11.4 (6) |
C8—C9—C10—C1 | 179.9 (2) | C17—C18—O6—C19 | −169.0 (6) |
C4—C5—C10—C9 | −173.8 (2) | C20'—C19'—O6—C18 | 95.9 (12) |
C6—C5—C10—C9 | 4.3 (3) | C20'—C19'—O6—C19 | 34.6 (15) |
C4—C5—C10—C1 | 3.2 (3) | C20—C19—O6—C18 | 159.6 (9) |
C6—C5—C10—C1 | −178.75 (18) | C20—C19—O6—C19' | −72.0 (19) |
C2—C1—C10—C9 | 172.3 (2) | C17—N2—S1—O2 | 126.11 (17) |
N1—C1—C10—C9 | −4.9 (3) | C13—N2—S1—O2 | −45.80 (18) |
C2—C1—C10—C5 | −4.6 (3) | C17—N2—S1—O1 | −2.41 (19) |
N1—C1—C10—C5 | 178.17 (19) | C13—N2—S1—O1 | −174.32 (15) |
N2—C13—C14—O3 | −10.0 (4) | C17—N2—S1—C6 | −119.93 (17) |
N2—C13—C14—O4 | 170.3 (2) | C13—N2—S1—C6 | 68.16 (17) |
N2—C17—C18—O5 | −10.7 (3) | C7—C6—S1—O2 | 14.37 (19) |
N2—C17—C18—O6 | 169.75 (19) | C5—C6—S1—O2 | −168.98 (16) |
C2—C1—N1—C11 | 111.9 (3) | C7—C6—S1—O1 | 144.39 (16) |
C10—C1—N1—C11 | −71.0 (3) | C5—C6—S1—O1 | −38.95 (19) |
C2—C1—N1—C12 | −18.7 (4) | C7—C6—S1—N2 | −101.51 (17) |
C10—C1—N1—C12 | 158.4 (2) | C5—C6—S1—N2 | 75.14 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O1 | 0.93 | 2.36 | 3.006 (3) | 126 |
C13—H13A···O2i | 0.97 | 2.36 | 3.272 (3) | 157 |
Symmetry code: (i) −x+1, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H26N2O6S |
Mr | 422.49 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 13.1266 (9), 8.4592 (5), 19.3206 (12) |
β (°) | 93.530 (1) |
V (Å3) | 2141.3 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.19 |
Crystal size (mm) | 0.20 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.970, 0.981 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16359, 4201, 3705 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.145, 1.05 |
No. of reflections | 4201 |
No. of parameters | 306 |
No. of restraints | 12 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.35, −0.27 |
Computer programs: SMART (Bruker, 2007), SAINT-Plus (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O1 | 0.93 | 2.36 | 3.006 (3) | 126.1 |
C13—H13A···O2i | 0.97 | 2.36 | 3.272 (3) | 157.3 |
Symmetry code: (i) −x+1, y−1/2, −z+1/2. |
References
Bruker (2007). SAINT-Plus and SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Christoforou, A. M., Marzilli, P. A. & Marzilli, L. G. (2006). Inorg. Chem. 45, 6771–6781. Web of Science CrossRef PubMed CAS Google Scholar
Corradini, R., Dossena, A., Galaverna, G., Marchelli, R., Panagia, A. & Sarto, G. (1997). J. Org. Chem. 62, 6283–6289. CrossRef CAS Web of Science Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Zhang, S., Zhao, B., Su, Z., Xia, X. & Zhang, Y. (2009). Acta Cryst. E65, o1452. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dansyl (5-(dimethylamino)naphthalene-1-sulfonyl) derivatives are of considerable interest because of their good fluorescent properties. Many fluorescent ligands bearing dansyl group have been reported in recent years (e.g. Corradini et al., 1997; Christoforou et al., 2006; Zhang et al., 2009). We are interested in preparing fluorescent ligands that are expected to bind to hydrophobic sites in proteins or membranes. With this in mind, the title compound, (I), was prepared and we report herein the crystal stucture.
In the molecular structure (Fig. 1), the N atom of the dimethylamino group is displaced by 0.113 (2) Å from the plane of the naphthalene ring system. The two ethoxycarbonyl groups adopt coiled conformations with C14—O4—C15—C16 and C18—O6—C119—C20 torsion angles of 90.1 (10)° and 159.6 (9)°, respectively. All bond lengths and bond angles are as expected. In the crystal structure (Fig.2) weak intermolecular C—H···O hydrogen bonds lead to the formation of a three-dimension network.