organic compounds
2-Carboxy-1-phenylethanaminium nitrate
aOrdered Matter Science Research Center, College of Chemistry and Chemical, Engineering, Southeast University, Nanjing 210096, People's Republic of China
*Correspondence e-mail: quzr@seu.edu.cn
In the title salt, C9H12NO2+·NO3−, the cation and anion are linked by a bifurcated N—H⋯(O,O) hydrogen bond. The crystal packing is stabilized by intermolecular N—H⋯O, O—H⋯O and C—H⋯O hydrogen bonds, which connect neighbouring cations and anions, resulting in a two-dimensional network.
Related literature
For details of the preparation of β-amino acids, see: Cohen et al. (2002); Qu et al. (2004).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: PRPKAPPA (Ferguson, 1999).
Supporting information
https://doi.org/10.1107/S1600536809042792/sj2656sup1.cif
contains datablocks I, New_Global_Publ_Block. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809042792/sj2656Isup2.hkl
Benzaldehyde (1.59 g, 15 mmol), malonic acid (2.5 g, 24 mmol) and ammonium acetate (3.0 g, 39 mmol) were added in a flask under nitrogen and refluxed for 24 h yielding a white precipitate. After cooling to room temperature, the solution was filtered to yield 3-3mino-3-phenylpropionic acid. This was dissolved in ethanol and nitric acid. After slowly evaporating over a period of 5 d, colorless prism-like crystals of the title compound, suitable for X-ray diffraction experiments were isolated.
Positional parameters of all the H atoms were calculated geometrically and were allowed to ride on the C, N atoms to which they are bonded, with C—H = 0.93 to 1.00 Å, Uiso(H) = 1.2 Ueq(C), N—H = 0.88 Å, Uiso(H)= 1.5 Ueq(N).
β-Amino acids are important molecules due to their pharmacological properties. Recently, there has been an increased interest in the enantiomeric preparation of β-amino acids as precursors for the synthesis of novel biologically active compounds (Cohen et al., 2002; Qu et al. 2004).
The title compound C9H12NO2+.NO3- exists as two independent ions linked by bifurcated N—H···O hydrogen bonds (Fig. 1). The
is stabilized by intermolecular N—H···O, O—H···O and C—H ···O hydrogen bonds (Table 1) which connect neighbouring cations and anions, resulting in a two-dimensional network (Fig. 2).For details of the preparation of β-amino acids, see: Cohen et al. (2002); Qu et al. (2004).
Data collection: CrystalClear (Rigaku 2005); cell
CrystalClear (Rigaku 2005); data reduction: CrystalClear (Rigaku 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: PRPKAPPA (Ferguson, 1999).Fig. 1. The asymmetric unit of the title compound, with displacement ellipsoids drawn at the 30% probability level. Intramolecular hydrogen bonds are drawn as a dashed lines. | |
Fig. 2. Packing diagram of the title compound, showing the structure along the b axis. Hydrogen bonds are drawn as dashed lines. |
C9H12NO2+·NO3− | F(000) = 480 |
Mr = 228.21 | Dx = 1.360 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1797 reflections |
a = 6.2017 (12) Å | θ = 3.1–27.5° |
b = 10.313 (2) Å | µ = 0.11 mm−1 |
c = 18.077 (4) Å | T = 293 K |
β = 105.36 (3)° | Prism, colorless |
V = 1114.9 (4) Å3 | 0.50 × 0.30 × 0.15 mm |
Z = 4 |
Rigaku SCXmini diffractometer | 2549 independent reflections |
Radiation source: fine-focus sealed tube | 1652 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.061 |
Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
CCD_Profile_fitting scans | h = −8→8 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −13→13 |
Tmin = 0.960, Tmax = 0.982 | l = −23→23 |
11050 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.080 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.231 | H-atom parameters constrained |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0829P)2 + 1.0943P] where P = (Fo2 + 2Fc2)/3 |
2549 reflections | (Δ/σ)max < 0.001 |
149 parameters | Δρmax = 0.59 e Å−3 |
1 restraint | Δρmin = −0.23 e Å−3 |
C9H12NO2+·NO3− | V = 1114.9 (4) Å3 |
Mr = 228.21 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.2017 (12) Å | µ = 0.11 mm−1 |
b = 10.313 (2) Å | T = 293 K |
c = 18.077 (4) Å | 0.50 × 0.30 × 0.15 mm |
β = 105.36 (3)° |
Rigaku SCXmini diffractometer | 2549 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 1652 reflections with I > 2σ(I) |
Tmin = 0.960, Tmax = 0.982 | Rint = 0.061 |
11050 measured reflections |
R[F2 > 2σ(F2)] = 0.080 | 1 restraint |
wR(F2) = 0.231 | H-atom parameters constrained |
S = 1.11 | Δρmax = 0.59 e Å−3 |
2549 reflections | Δρmin = −0.23 e Å−3 |
149 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 1.1549 (5) | 0.1241 (2) | 0.30410 (14) | 0.0613 (8) | |
O2 | 0.8967 (5) | 0.2333 (3) | 0.34151 (16) | 0.0631 (8) | |
H2 | 0.9252 | 0.1813 | 0.3771 | 0.095* | |
N1 | 0.7398 (5) | 0.3900 (2) | 0.11238 (14) | 0.0382 (6) | |
H1A | 0.6020 | 0.3868 | 0.0823 | 0.066 (12)* | |
H1B | 0.7688 | 0.4697 | 0.1305 | 0.050 (10)* | |
H1C | 0.8352 | 0.3690 | 0.0856 | 0.050 (11)* | |
C3 | 1.0254 (6) | 0.2102 (3) | 0.29593 (19) | 0.0466 (8) | |
C4 | 0.6953 (6) | 0.1620 (3) | 0.14746 (19) | 0.0442 (8) | |
C1 | 0.7597 (6) | 0.2980 (3) | 0.17750 (18) | 0.0434 (8) | |
H1 | 0.6540 | 0.3255 | 0.2063 | 0.052* | |
C2 | 0.9930 (6) | 0.3062 (3) | 0.23070 (19) | 0.0505 (9) | |
H2A | 1.1015 | 0.2890 | 0.2019 | 0.061* | |
H2B | 1.0190 | 0.3933 | 0.2514 | 0.061* | |
C7 | 0.5759 (11) | −0.0891 (4) | 0.0971 (3) | 0.0857 (17) | |
H7 | 0.5361 | −0.1733 | 0.0805 | 0.103* | |
C8 | 0.4647 (9) | −0.0261 (5) | 0.1410 (4) | 0.0903 (18) | |
H8 | 0.3468 | −0.0675 | 0.1541 | 0.108* | |
C5 | 0.8088 (8) | 0.0973 (4) | 0.1026 (2) | 0.0620 (11) | |
H5 | 0.9274 | 0.1374 | 0.0892 | 0.074* | |
C9 | 0.5224 (7) | 0.1002 (4) | 0.1675 (3) | 0.0649 (11) | |
H9 | 0.4448 | 0.1417 | 0.1982 | 0.078* | |
C6 | 0.7458 (10) | −0.0285 (5) | 0.0774 (3) | 0.0817 (16) | |
H6 | 0.8219 | −0.0711 | 0.0466 | 0.098* | |
O3 | 0.3218 (4) | 0.3769 (3) | −0.01018 (15) | 0.0562 (7) | |
O4 | 0.2293 (5) | 0.3826 (3) | 0.09586 (15) | 0.0706 (9) | |
O5 | −0.0245 (4) | 0.3499 (3) | −0.00958 (16) | 0.0597 (7) | |
N2 | 0.1772 (5) | 0.3697 (3) | 0.02545 (17) | 0.0457 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.094 (2) | 0.0400 (14) | 0.0476 (15) | 0.0168 (14) | 0.0138 (14) | 0.0082 (11) |
O2 | 0.0649 (18) | 0.0546 (16) | 0.0658 (18) | 0.0237 (13) | 0.0100 (14) | 0.0187 (13) |
N1 | 0.0436 (15) | 0.0318 (14) | 0.0352 (14) | −0.0020 (11) | 0.0035 (12) | 0.0044 (11) |
C3 | 0.060 (2) | 0.0397 (18) | 0.0345 (17) | 0.0015 (16) | 0.0034 (15) | −0.0028 (14) |
C4 | 0.053 (2) | 0.0337 (16) | 0.0381 (17) | −0.0049 (14) | −0.0023 (15) | 0.0075 (14) |
C1 | 0.0523 (19) | 0.0366 (17) | 0.0377 (17) | −0.0064 (14) | 0.0055 (14) | 0.0062 (13) |
C2 | 0.059 (2) | 0.0430 (19) | 0.043 (2) | −0.0033 (16) | 0.0017 (17) | 0.0061 (15) |
C7 | 0.110 (4) | 0.037 (2) | 0.079 (3) | −0.010 (3) | −0.028 (3) | 0.002 (2) |
C8 | 0.081 (3) | 0.058 (3) | 0.110 (4) | −0.032 (3) | −0.012 (3) | 0.022 (3) |
C5 | 0.078 (3) | 0.046 (2) | 0.056 (2) | 0.0012 (19) | 0.009 (2) | 0.0072 (18) |
C9 | 0.058 (2) | 0.051 (2) | 0.082 (3) | −0.0113 (18) | 0.012 (2) | 0.011 (2) |
C6 | 0.125 (5) | 0.052 (3) | 0.054 (3) | 0.017 (3) | −0.001 (3) | −0.002 (2) |
O3 | 0.0519 (15) | 0.0685 (17) | 0.0521 (15) | −0.0016 (12) | 0.0203 (12) | 0.0067 (13) |
O4 | 0.0683 (18) | 0.105 (2) | 0.0385 (15) | 0.0053 (16) | 0.0137 (13) | 0.0178 (15) |
O5 | 0.0421 (14) | 0.0672 (17) | 0.0668 (18) | −0.0069 (12) | 0.0093 (12) | −0.0081 (14) |
N2 | 0.0524 (17) | 0.0380 (15) | 0.0472 (17) | 0.0036 (12) | 0.0142 (14) | 0.0113 (13) |
O1—C3 | 1.180 (4) | C2—H2B | 0.9700 |
O2—C3 | 1.312 (4) | C7—C8 | 1.349 (8) |
O2—H2 | 0.8200 | C7—C6 | 1.352 (8) |
N1—C1 | 1.492 (4) | C7—H7 | 0.9300 |
N1—H1A | 0.8837 | C8—C9 | 1.401 (7) |
N1—H1B | 0.8848 | C8—H8 | 0.9300 |
N1—H1C | 0.8849 | C5—C6 | 1.396 (6) |
C3—C2 | 1.512 (5) | C5—H5 | 0.9300 |
C4—C9 | 1.375 (5) | C9—H9 | 0.9300 |
C4—C5 | 1.378 (5) | C6—H6 | 0.9300 |
C4—C1 | 1.519 (5) | O3—N2 | 1.237 (4) |
C1—C2 | 1.513 (5) | O4—N2 | 1.235 (4) |
C1—H1 | 0.9800 | O5—N2 | 1.260 (4) |
C2—H2A | 0.9700 | ||
C3—O2—H2 | 109.5 | C3—C2—H2B | 109.3 |
C1—N1—H1A | 109.0 | C1—C2—H2B | 109.3 |
C1—N1—H1B | 109.4 | H2A—C2—H2B | 108.0 |
H1A—N1—H1B | 109.4 | C8—C7—C6 | 119.2 (4) |
C1—N1—H1C | 110.4 | C8—C7—H7 | 120.4 |
H1A—N1—H1C | 109.4 | C6—C7—H7 | 120.4 |
H1B—N1—H1C | 109.3 | C7—C8—C9 | 121.7 (5) |
O1—C3—O2 | 124.4 (3) | C7—C8—H8 | 119.2 |
O1—C3—C2 | 122.4 (3) | C9—C8—H8 | 119.2 |
O2—C3—C2 | 113.2 (3) | C4—C5—C6 | 120.0 (5) |
C9—C4—C5 | 119.1 (4) | C4—C5—H5 | 120.0 |
C9—C4—C1 | 118.9 (4) | C6—C5—H5 | 120.0 |
C5—C4—C1 | 122.0 (3) | C4—C9—C8 | 119.2 (5) |
N1—C1—C2 | 109.3 (3) | C4—C9—H9 | 120.4 |
N1—C1—C4 | 110.3 (3) | C8—C9—H9 | 120.4 |
C2—C1—C4 | 113.3 (3) | C7—C6—C5 | 121.0 (5) |
N1—C1—H1 | 107.9 | C7—C6—H6 | 119.5 |
C2—C1—H1 | 107.9 | C5—C6—H6 | 119.5 |
C4—C1—H1 | 107.9 | O4—N2—O3 | 120.2 (3) |
C3—C2—C1 | 111.5 (3) | O4—N2—O5 | 119.3 (3) |
C3—C2—H2A | 109.3 | O3—N2—O5 | 120.5 (3) |
C1—C2—H2A | 109.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8···O2i | 0.93 | 2.56 | 3.414 (5) | 152 |
C2—H2A···O4ii | 0.97 | 2.46 | 3.256 (5) | 140 |
O2—H2···O5iii | 0.82 | 2.01 | 2.743 (4) | 148 |
N1—H1C···O5ii | 0.88 | 2.13 | 2.979 (4) | 160 |
N1—H1C···O4ii | 0.88 | 2.41 | 3.129 (4) | 139 |
N1—H1B···O1iv | 0.88 | 1.97 | 2.830 (4) | 166 |
N1—H1A···O4 | 0.88 | 2.39 | 3.101 (4) | 138 |
N1—H1A···O3 | 0.88 | 2.07 | 2.933 (4) | 165 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x+1, y, z; (iii) x+1, −y+1/2, z+1/2; (iv) −x+2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C9H12NO2+·NO3− |
Mr | 228.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 6.2017 (12), 10.313 (2), 18.077 (4) |
β (°) | 105.36 (3) |
V (Å3) | 1114.9 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.50 × 0.30 × 0.15 |
Data collection | |
Diffractometer | Rigaku SCXmini |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.960, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11050, 2549, 1652 |
Rint | 0.061 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.080, 0.231, 1.11 |
No. of reflections | 2549 |
No. of parameters | 149 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.59, −0.23 |
Computer programs: CrystalClear (Rigaku 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), PRPKAPPA (Ferguson, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8···O2i | 0.93 | 2.56 | 3.414 (5) | 152.3 |
C2—H2A···O4ii | 0.97 | 2.46 | 3.256 (5) | 139.5 |
O2—H2···O5iii | 0.82 | 2.01 | 2.743 (4) | 147.7 |
N1—H1C···O5ii | 0.88 | 2.13 | 2.979 (4) | 159.8 |
N1—H1C···O4ii | 0.88 | 2.41 | 3.129 (4) | 139.2 |
N1—H1B···O1iv | 0.88 | 1.97 | 2.830 (4) | 165.5 |
N1—H1A···O4 | 0.88 | 2.39 | 3.101 (4) | 137.9 |
N1—H1A···O3 | 0.88 | 2.07 | 2.933 (4) | 165.2 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x+1, y, z; (iii) x+1, −y+1/2, z+1/2; (iv) −x+2, y+1/2, −z+1/2. |
Acknowledgements
This work was supported by the Technical Fund Financing Projects (No. 9207042464 and 9207041482) from Southeast University to ZRQ.
References
Cohen, J. H., Abdel-Magid, A. F., Almond, H. R. Jr & Maryanoff, C. A. (2002). Tetrahedron Lett. 43, 1977–1981. Web of Science CrossRef CAS Google Scholar
Ferguson, G. (1999). PRPKAPPA. University of Guelph, Canada. Google Scholar
Qu, Z.-R., Zhao, H., Wang, Y.-P., Wang, X.-S., Ye, Q., Li, Y.-H., Xiong, R.-G., Abrahams, B. F., Liu, Z.-G. & Xue, Z.-L. (2004). Chem. Eur. J. 10, 54–60. Google Scholar
Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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β-Amino acids are important molecules due to their pharmacological properties. Recently, there has been an increased interest in the enantiomeric preparation of β-amino acids as precursors for the synthesis of novel biologically active compounds (Cohen et al., 2002; Qu et al. 2004).
The title compound C9H12NO2+.NO3- exists as two independent ions linked by bifurcated N—H···O hydrogen bonds (Fig. 1). The crystal structure is stabilized by intermolecular N—H···O, O—H···O and C—H ···O hydrogen bonds (Table 1) which connect neighbouring cations and anions, resulting in a two-dimensional network (Fig. 2).