metal-organic compounds
Bis{2-(5-hydroxy-2-[1-(hydroxyimino)ethyl]phenolato-κ2O1,N}nickel(II) N,N-dimethylformamide disolvate
aDepartment of Chemistry & Chemical Engineering, Binzhou University, Binzhou 256600, People's Republic of China
*Correspondence e-mail: yanqiudang@163.com
The Ni atom of the title complex, [Ni(C8H8NO3)2]·2C3H7NO, lies on a center of inversion in a square-planar N2O2 coordination environment. An intramolecular O—H⋯O hydrogen bond exists between the oximic hydroxy group of one ligand and the metal-coordinated O atom of the symmetry-related ligand. The dimethylformamide solvent molecules are connected to the phenolate groups of the complex via O—H⋯O hydrogen bonds.
Related literature
For general background to the applications of 2-hydroxyaryloxime complexes in extractive metallurgy and biology, see: Keeney et al. (1984); Elo & Lumme (1985); Chaudhuri (2003); Milios et al. (2007). For related structures, see: Hatzidimitriou et al. (1997); Voutsas et al. (1999).
Experimental
Crystal data
|
Refinement
|
Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536809039257/tk2537sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809039257/tk2537Isup2.hkl
Nickel perchlorate hexahydrate (0.36 g, 1 mmol), 1-(2,4-dihydroxyphenyl)ethanone oxime (0.17 g, 1 mmol), H2O (6 ml) and DMF (6 ml) were placed in a 20 ml Teflon-lined autoclave. The autoclave was heated at 393 K for 2 days. The autoclave was cooled over a period of 5 h at a rate of 20 K per hour. Green crystals were collected by filtration, washed with methanol, and dried in air; yield 38% based on Ni.
H atoms were placed at calculated positions (C—H = 0.93–0.96 Å and O—H = 0.82 Å) and refined in the riding model approximation with Uiso(H) = 1.2–1.5Ueq(C or O).
2-Hydroxyaryloximes are important organic ligands and their complexes found to have many applications, especially in extractive metallurgy and biology (Chaudhuri, 2003; Elo & Lumme, 1985; Keeney et al., 1984; Milios et al., 2007). Structures of nickel complexes based on the hydroxyoxime ligands 2-[1-(hydroxyimino)ethyl]phenol, bis[2-(1-(hydroxyimino)ethyl)phenolato]nickel (Hatzidimitriou et al., 1997), and bis[2-(5-methyl-1-(hydroxyimino)ethyl)phenolato]nickel (Voutsas et al., 1999), have been reported. As a continuation of these studies, the structure of the title complex, (I), is described herein.
The Ni atom in (I), Fig. 1, is four-coordinate and lies on a center of inversion in a square-planar coordination geometry with the O2—Ni1—N1 angle = 91.84 (6)° and O2—Ni1—N1i = 88.16 (6)°; i: -x, -y, -z. The distances of the Ni1—O2 and Ni1—N1 bonds is similar to those observed in the Ni complexes cited above. The deprotonated phenolato oxygen atom O2 is intramolecularly hydrogen bonded to the oximic hydroxyl group of the opposite ligand, Table 1. The complex and the solvent N,N-dimethylformamide molecules are linked by the O—H···O hydrogen bonds, Table 1.
For general background to the applications of 2-hydroxyaryloxime complexes in extractive metallurgy and biology, see: Keeney et al. (1984); Elo & Lumme (1985); Chaudhuri (2003); Milios et al. (2007). For related structures, see: Hatzidimitriou et al. (1997); Voutsas et al. (1999).
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Ni(C8H8NO3)2]·2C3H7NO | F(000) = 564 |
Mr = 537.21 | Dx = 1.455 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5624 reflections |
a = 13.2905 (10) Å | θ = 2.2–26.5° |
b = 5.8649 (4) Å | µ = 0.85 mm−1 |
c = 15.9345 (12) Å | T = 295 K |
β = 99.129 (1)° | Block, brown |
V = 1226.32 (16) Å3 | 0.50 × 0.40 × 0.30 mm |
Z = 2 |
Bruker SMART APEX area-detector diffractometer | 2398 independent reflections |
Radiation source: fine-focus sealed tube | 2067 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
φ and ω scans | θmax = 26.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS, Bruker, 2002) | h = −16→14 |
Tmin = 0.677, Tmax = 0.786 | k = −7→6 |
6243 measured reflections | l = −19→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.083 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0436P)2 + 0.4293P] where P = (Fo2 + 2Fc2)/3 |
2398 reflections | (Δ/σ)max < 0.001 |
160 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
[Ni(C8H8NO3)2]·2C3H7NO | V = 1226.32 (16) Å3 |
Mr = 537.21 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.2905 (10) Å | µ = 0.85 mm−1 |
b = 5.8649 (4) Å | T = 295 K |
c = 15.9345 (12) Å | 0.50 × 0.40 × 0.30 mm |
β = 99.129 (1)° |
Bruker SMART APEX area-detector diffractometer | 2398 independent reflections |
Absorption correction: multi-scan (SADABS, Bruker, 2002) | 2067 reflections with I > 2σ(I) |
Tmin = 0.677, Tmax = 0.786 | Rint = 0.017 |
6243 measured reflections |
R[F2 > 2σ(F2)] = 0.028 | 0 restraints |
wR(F2) = 0.083 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.25 e Å−3 |
2398 reflections | Δρmin = −0.20 e Å−3 |
160 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.0000 | 0.0000 | 0.0000 | 0.03529 (12) | |
O1 | 0.36927 (11) | 0.3031 (3) | 0.28775 (9) | 0.0573 (4) | |
H1 | 0.3831 | 0.4080 | 0.3217 | 0.086* | |
O2 | 0.11298 (11) | 0.0218 (2) | 0.08068 (10) | 0.0512 (4) | |
O3 | −0.16273 (10) | 0.2912 (3) | 0.00960 (10) | 0.0600 (4) | |
H3 | −0.1806 | 0.1977 | −0.0281 | 0.090* | |
O4 | 0.45924 (14) | 0.6291 (3) | 0.38447 (11) | 0.0733 (5) | |
N1 | −0.06182 (11) | 0.2487 (3) | 0.04612 (10) | 0.0401 (4) | |
N2 | 0.57279 (13) | 0.9128 (3) | 0.41807 (11) | 0.0477 (4) | |
C1 | 0.14012 (14) | 0.1839 (3) | 0.13806 (11) | 0.0370 (4) | |
C2 | 0.23725 (14) | 0.1673 (3) | 0.18586 (11) | 0.0412 (4) | |
H2 | 0.2786 | 0.0444 | 0.1773 | 0.049* | |
C3 | 0.27296 (14) | 0.3301 (3) | 0.24559 (12) | 0.0412 (4) | |
C4 | 0.21144 (16) | 0.5124 (3) | 0.26013 (14) | 0.0472 (5) | |
H4 | 0.2350 | 0.6225 | 0.3005 | 0.057* | |
C5 | 0.11510 (16) | 0.5279 (3) | 0.21400 (13) | 0.0444 (4) | |
H5 | 0.0744 | 0.6507 | 0.2241 | 0.053* | |
C6 | 0.07536 (14) | 0.3672 (3) | 0.15236 (11) | 0.0359 (4) | |
C7 | −0.02770 (14) | 0.3901 (3) | 0.10657 (11) | 0.0371 (4) | |
C8 | −0.09685 (17) | 0.5748 (4) | 0.12913 (15) | 0.0539 (5) | |
H8A | −0.1664 | 0.5247 | 0.1164 | 0.081* | |
H8B | −0.0880 | 0.7094 | 0.0968 | 0.081* | |
H8C | −0.0804 | 0.6085 | 0.1887 | 0.081* | |
C9 | 0.62892 (19) | 0.7952 (4) | 0.49118 (15) | 0.0622 (6) | |
H9A | 0.6381 | 0.8958 | 0.5393 | 0.093* | |
H9B | 0.6943 | 0.7492 | 0.4787 | 0.093* | |
H9C | 0.5914 | 0.6631 | 0.5038 | 0.093* | |
C10 | 0.60887 (19) | 1.1364 (4) | 0.39838 (18) | 0.0678 (7) | |
H10A | 0.6067 | 1.2368 | 0.4456 | 0.102* | |
H10B | 0.5662 | 1.1957 | 0.3490 | 0.102* | |
H10C | 0.6777 | 1.1248 | 0.3875 | 0.102* | |
C11 | 0.49409 (16) | 0.8175 (4) | 0.37059 (14) | 0.0533 (5) | |
H11 | 0.4626 | 0.8977 | 0.3233 | 0.064* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.03338 (19) | 0.0364 (2) | 0.03341 (19) | 0.00408 (13) | −0.00300 (12) | −0.00579 (13) |
O1 | 0.0471 (8) | 0.0590 (9) | 0.0575 (9) | 0.0005 (7) | −0.0175 (7) | −0.0137 (7) |
O2 | 0.0461 (8) | 0.0486 (8) | 0.0520 (8) | 0.0128 (6) | −0.0136 (6) | −0.0206 (6) |
O3 | 0.0393 (8) | 0.0685 (10) | 0.0646 (10) | 0.0185 (7) | −0.0148 (7) | −0.0263 (8) |
O4 | 0.0707 (11) | 0.0620 (11) | 0.0790 (12) | −0.0240 (9) | −0.0133 (9) | −0.0079 (9) |
N1 | 0.0331 (8) | 0.0433 (8) | 0.0408 (8) | 0.0070 (6) | −0.0033 (6) | −0.0046 (7) |
N2 | 0.0420 (9) | 0.0450 (9) | 0.0548 (10) | −0.0038 (7) | 0.0031 (7) | −0.0094 (8) |
C1 | 0.0397 (9) | 0.0376 (9) | 0.0319 (9) | −0.0009 (8) | 0.0000 (7) | −0.0030 (7) |
C2 | 0.0403 (10) | 0.0417 (10) | 0.0394 (10) | 0.0037 (8) | −0.0005 (8) | −0.0039 (8) |
C3 | 0.0404 (10) | 0.0440 (10) | 0.0364 (9) | −0.0059 (8) | −0.0018 (8) | 0.0010 (8) |
C4 | 0.0500 (11) | 0.0434 (11) | 0.0453 (11) | −0.0072 (9) | −0.0013 (9) | −0.0120 (8) |
C5 | 0.0466 (11) | 0.0396 (10) | 0.0460 (11) | 0.0014 (8) | 0.0041 (9) | −0.0084 (8) |
C6 | 0.0391 (9) | 0.0363 (9) | 0.0319 (9) | −0.0004 (7) | 0.0046 (7) | −0.0007 (7) |
C7 | 0.0415 (10) | 0.0370 (10) | 0.0330 (9) | 0.0036 (8) | 0.0069 (7) | −0.0004 (7) |
C8 | 0.0506 (12) | 0.0528 (12) | 0.0563 (13) | 0.0135 (10) | 0.0025 (10) | −0.0134 (10) |
C9 | 0.0567 (13) | 0.0743 (16) | 0.0517 (13) | −0.0062 (12) | −0.0034 (10) | −0.0073 (11) |
C10 | 0.0595 (14) | 0.0498 (13) | 0.0917 (19) | −0.0088 (11) | 0.0048 (13) | −0.0066 (12) |
C11 | 0.0470 (11) | 0.0536 (12) | 0.0553 (12) | −0.0024 (10) | −0.0046 (9) | −0.0093 (10) |
Ni1—O2i | 1.8197 (14) | C3—C4 | 1.387 (3) |
Ni1—O2 | 1.8197 (14) | C4—C5 | 1.375 (3) |
Ni1—N1i | 1.8801 (15) | C4—H4 | 0.9300 |
Ni1—N1 | 1.8801 (15) | C5—C6 | 1.403 (3) |
O1—C3 | 1.357 (2) | C5—H5 | 0.9300 |
O1—H1 | 0.8200 | C6—C7 | 1.452 (2) |
O2—C1 | 1.328 (2) | C7—C8 | 1.501 (3) |
O3—N1 | 1.3970 (19) | C8—H8A | 0.9600 |
O3—H3 | 0.8200 | C8—H8B | 0.9600 |
O4—C11 | 1.232 (3) | C8—H8C | 0.9600 |
N1—C7 | 1.297 (2) | C9—H9A | 0.9600 |
N2—C11 | 1.315 (3) | C9—H9B | 0.9600 |
N2—C10 | 1.447 (3) | C9—H9C | 0.9600 |
N2—C9 | 1.454 (3) | C10—H10A | 0.9600 |
C1—C2 | 1.394 (2) | C10—H10B | 0.9600 |
C1—C6 | 1.418 (2) | C10—H10C | 0.9600 |
C2—C3 | 1.378 (3) | C11—H11 | 0.9300 |
C2—H2 | 0.9300 | ||
O2i—Ni1—O2 | 180.00 (14) | C6—C5—H5 | 118.5 |
O2i—Ni1—N1i | 91.84 (6) | C5—C6—C1 | 116.83 (17) |
O2—Ni1—N1i | 88.16 (6) | C5—C6—C7 | 120.64 (16) |
O2i—Ni1—N1 | 88.16 (6) | C1—C6—C7 | 122.52 (16) |
O2—Ni1—N1 | 91.84 (6) | N1—C7—C6 | 120.30 (16) |
N1i—Ni1—N1 | 180.00 (11) | N1—C7—C8 | 118.96 (17) |
C3—O1—H1 | 109.5 | C6—C7—C8 | 120.74 (16) |
C1—O2—Ni1 | 129.80 (12) | C7—C8—H8A | 109.5 |
N1—O3—H3 | 109.5 | C7—C8—H8B | 109.5 |
C7—N1—O3 | 113.25 (14) | H8A—C8—H8B | 109.5 |
C7—N1—Ni1 | 131.56 (13) | C7—C8—H8C | 109.5 |
O3—N1—Ni1 | 115.19 (11) | H8A—C8—H8C | 109.5 |
C11—N2—C10 | 121.4 (2) | H8B—C8—H8C | 109.5 |
C11—N2—C9 | 121.3 (2) | N2—C9—H9A | 109.5 |
C10—N2—C9 | 117.25 (18) | N2—C9—H9B | 109.5 |
O2—C1—C2 | 116.94 (16) | H9A—C9—H9B | 109.5 |
O2—C1—C6 | 123.20 (16) | N2—C9—H9C | 109.5 |
C2—C1—C6 | 119.86 (16) | H9A—C9—H9C | 109.5 |
C3—C2—C1 | 121.11 (17) | H9B—C9—H9C | 109.5 |
C3—C2—H2 | 119.4 | N2—C10—H10A | 109.5 |
C1—C2—H2 | 119.4 | N2—C10—H10B | 109.5 |
O1—C3—C2 | 117.08 (17) | H10A—C10—H10B | 109.5 |
O1—C3—C4 | 122.81 (17) | N2—C10—H10C | 109.5 |
C2—C3—C4 | 120.11 (17) | H10A—C10—H10C | 109.5 |
C5—C4—C3 | 119.03 (17) | H10B—C10—H10C | 109.5 |
C5—C4—H4 | 120.5 | O4—C11—N2 | 124.5 (2) |
C3—C4—H4 | 120.5 | O4—C11—H11 | 117.8 |
C4—C5—C6 | 123.04 (18) | N2—C11—H11 | 117.8 |
C4—C5—H5 | 118.5 |
Symmetry code: (i) −x, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O4 | 0.82 | 1.84 | 2.622 (2) | 159 |
O3—H3···O2i | 0.82 | 1.85 | 2.4857 (19) | 134 |
Symmetry code: (i) −x, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C8H8NO3)2]·2C3H7NO |
Mr | 537.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 13.2905 (10), 5.8649 (4), 15.9345 (12) |
β (°) | 99.129 (1) |
V (Å3) | 1226.32 (16) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.85 |
Crystal size (mm) | 0.50 × 0.40 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART APEX area-detector |
Absorption correction | Multi-scan (SADABS, Bruker, 2002) |
Tmin, Tmax | 0.677, 0.786 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6243, 2398, 2067 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.028, 0.083, 1.04 |
No. of reflections | 2398 |
No. of parameters | 160 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.20 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O4 | 0.82 | 1.84 | 2.622 (2) | 159 |
O3—H3···O2i | 0.82 | 1.85 | 2.4857 (19) | 134 |
Symmetry code: (i) −x, −y, −z. |
Acknowledgements
The author thanks the Science Foundation of Binzhou University for supporting this work (BZXYG0901 and BZXYQNLG200820).
References
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2-Hydroxyaryloximes are important organic ligands and their complexes found to have many applications, especially in extractive metallurgy and biology (Chaudhuri, 2003; Elo & Lumme, 1985; Keeney et al., 1984; Milios et al., 2007). Structures of nickel complexes based on the hydroxyoxime ligands 2-[1-(hydroxyimino)ethyl]phenol, bis[2-(1-(hydroxyimino)ethyl)phenolato]nickel (Hatzidimitriou et al., 1997), and bis[2-(5-methyl-1-(hydroxyimino)ethyl)phenolato]nickel (Voutsas et al., 1999), have been reported. As a continuation of these studies, the structure of the title complex, (I), is described herein.
The Ni atom in (I), Fig. 1, is four-coordinate and lies on a center of inversion in a square-planar coordination geometry with the O2—Ni1—N1 angle = 91.84 (6)° and O2—Ni1—N1i = 88.16 (6)°; i: -x, -y, -z. The distances of the Ni1—O2 and Ni1—N1 bonds is similar to those observed in the Ni complexes cited above. The deprotonated phenolato oxygen atom O2 is intramolecularly hydrogen bonded to the oximic hydroxyl group of the opposite ligand, Table 1. The complex and the solvent N,N-dimethylformamide molecules are linked by the O—H···O hydrogen bonds, Table 1.