metal-organic compounds
Bis(2-methyl-1H-imidazole-κN3)silver(I) nitrate dihydrate
aDepartment of Basic Science, Tianjin Agricultural University, Tjianjin 300384, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: congfangdi666@yahoo.com.cn
The AgI atom in the salt, [Ag(C4H6N2)2]NO3·2H2O, shows a nearly linear coordination [N—Ag—N = 178.26 (7)°]. The cation, anion and water molecules are linked by N—H⋯O and O—H⋯O hydrogen bonds into a layer motif extending parallel to (101).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
10.1107/S1600536809045838/bt5122sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809045838/bt5122Isup2.hkl
Silver nitrate (0.5 mmol, 0.085 g) and 2-methyl-1H-imidazole (0.5 mmol, 0.041 g) in water (15 ml) were heated in a Parr bomb at 433 K for three days. Crystals of the adduct were isolated from the cool mixture in 30% yield.
Carbon-bound H-atoms were placed in calculated positions (C—H 0.93–0.97 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2–1.5U(C). The amino and water H atoms were located in a difference Fourier map, and were refined with a distance restraint of N–H = O–H = 0.85±0.01 Å; their displacement parameters were refined.The final difference Fourier map had a peak that was displaced by 0.5 along y relative to Ag1. Thus, for the reflections with k odd a scale factor was refined to 1.035 (2) with respect to the reflections with k even. Although the
was not significantly improved, the final difference Fourier map now did not have any large peaks.Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).Fig. 1. Anisotropic displacement ellipsoid plot (Barbour, 2001) of [Ag(C4H6N2)2][NO3].2H2O at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
[Ag(C4H6N2)2]NO3·2H2O | F(000) = 744 |
Mr = 370.13 | Dx = 1.786 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 3827 reflections |
a = 6.8001 (4) Å | θ = 2.9–26.1° |
b = 17.0196 (9) Å | µ = 1.49 mm−1 |
c = 12.1453 (7) Å | T = 295 K |
β = 101.691 (1)° | Block, colorless |
V = 1376.48 (13) Å3 | 0.21 × 0.19 × 0.17 mm |
Z = 4 |
Bruker APEX2 diffractometer | 2721 independent reflections |
Radiation source: fine-focus sealed tube | 2083 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ϕ and ω scans | θmax = 26.1°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −4→8 |
Tmin = 0.745, Tmax = 0.786 | k = −19→21 |
7483 measured reflections | l = −15→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.073 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0441P)2 + 0.0379P] where P = (Fo2 + 2Fc2)/3 |
2721 reflections | (Δ/σ)max = 0.001 |
198 parameters | Δρmax = 0.54 e Å−3 |
6 restraints | Δρmin = −0.34 e Å−3 |
[Ag(C4H6N2)2]NO3·2H2O | V = 1376.48 (13) Å3 |
Mr = 370.13 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.8001 (4) Å | µ = 1.49 mm−1 |
b = 17.0196 (9) Å | T = 295 K |
c = 12.1453 (7) Å | 0.21 × 0.19 × 0.17 mm |
β = 101.691 (1)° |
Bruker APEX2 diffractometer | 2721 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2083 reflections with I > 2σ(I) |
Tmin = 0.745, Tmax = 0.786 | Rint = 0.020 |
7483 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 6 restraints |
wR(F2) = 0.073 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | Δρmax = 0.54 e Å−3 |
2721 reflections | Δρmin = −0.34 e Å−3 |
198 parameters |
x | y | z | Uiso*/Ueq | ||
Ag1 | 0.63346 (3) | 0.501978 (10) | 0.882866 (16) | 0.02240 (9) | |
O1 | −0.1909 (3) | 0.26078 (11) | 0.44924 (15) | 0.0315 (5) | |
O2 | −0.0592 (3) | 0.30353 (12) | 0.61645 (17) | 0.0404 (5) | |
O3 | −0.2399 (3) | 0.19831 (13) | 0.59642 (18) | 0.0458 (6) | |
O1w | 0.1172 (3) | 0.35094 (12) | 0.38606 (16) | 0.0266 (4) | |
O2w | 0.3941 (3) | 0.24560 (11) | 0.34310 (17) | 0.0292 (4) | |
N1 | 0.4754 (4) | 0.49985 (11) | 0.7163 (2) | 0.0217 (5) | |
N2 | 0.2877 (3) | 0.45702 (14) | 0.55959 (19) | 0.0257 (5) | |
H2 | 0.228 (4) | 0.4222 (13) | 0.514 (2) | 0.043 (9)* | |
N3 | 0.7904 (3) | 0.50045 (10) | 1.0498 (2) | 0.0201 (5) | |
N4 | 0.9606 (3) | 0.45734 (13) | 1.21030 (19) | 0.0219 (5) | |
H4 | 1.010 (4) | 0.4257 (12) | 1.2620 (16) | 0.025 (8)* | |
N5 | −0.1639 (3) | 0.25410 (13) | 0.55457 (19) | 0.0275 (5) | |
C1 | 0.3998 (4) | 0.56352 (16) | 0.6500 (2) | 0.0242 (6) | |
H1 | 0.4245 | 0.6160 | 0.6694 | 0.029* | |
C2 | 0.2853 (4) | 0.53782 (17) | 0.5535 (2) | 0.0267 (6) | |
H2A | 0.2177 | 0.5685 | 0.4944 | 0.032* | |
C3 | 0.4044 (4) | 0.43623 (15) | 0.6586 (2) | 0.0230 (6) | |
C4 | 0.4422 (4) | 0.35360 (15) | 0.6951 (3) | 0.0344 (7) | |
H4A | 0.5512 | 0.3517 | 0.7592 | 0.052* | |
H4B | 0.4764 | 0.3235 | 0.6349 | 0.052* | |
H4C | 0.3236 | 0.3321 | 0.7150 | 0.052* | |
C5 | 0.8772 (4) | 0.56384 (16) | 1.1123 (2) | 0.0232 (6) | |
H5 | 0.8652 | 0.6160 | 1.0893 | 0.028* | |
C6 | 0.9816 (4) | 0.53821 (16) | 1.2118 (2) | 0.0243 (6) | |
H6 | 1.0535 | 0.5687 | 1.2698 | 0.029* | |
C7 | 0.8427 (3) | 0.43705 (16) | 1.1119 (2) | 0.0206 (6) | |
C8 | 0.7814 (4) | 0.35502 (14) | 1.0811 (2) | 0.0318 (7) | |
H8A | 0.6674 | 0.3552 | 1.0198 | 0.048* | |
H8B | 0.7466 | 0.3290 | 1.1447 | 0.048* | |
H8C | 0.8906 | 0.3277 | 1.0589 | 0.048* | |
H11 | 0.192 (5) | 0.3164 (18) | 0.366 (3) | 0.089 (16)* | |
H12 | 0.029 (4) | 0.3258 (17) | 0.412 (3) | 0.052 (11)* | |
H21 | 0.517 (2) | 0.2499 (19) | 0.374 (3) | 0.060 (11)* | |
H22 | 0.392 (5) | 0.2426 (19) | 0.2737 (10) | 0.066 (12)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ag1 | 0.01779 (13) | 0.02855 (14) | 0.01956 (14) | −0.00075 (8) | 0.00074 (9) | −0.00051 (8) |
O1 | 0.0306 (10) | 0.0386 (11) | 0.0230 (11) | −0.0041 (9) | 0.0001 (8) | −0.0002 (8) |
O2 | 0.0438 (12) | 0.0364 (12) | 0.0350 (13) | −0.0013 (10) | −0.0064 (10) | −0.0126 (10) |
O3 | 0.0549 (14) | 0.0491 (13) | 0.0362 (13) | −0.0194 (11) | 0.0157 (11) | −0.0026 (10) |
O1w | 0.0270 (11) | 0.0253 (11) | 0.0268 (11) | 0.0008 (9) | 0.0038 (9) | 0.0015 (8) |
O2w | 0.0280 (11) | 0.0296 (11) | 0.0276 (12) | 0.0012 (9) | 0.0001 (9) | −0.0027 (9) |
N1 | 0.0174 (11) | 0.0250 (12) | 0.0218 (12) | −0.0016 (8) | 0.0017 (9) | −0.0017 (9) |
N2 | 0.0221 (12) | 0.0310 (14) | 0.0230 (13) | 0.0004 (10) | 0.0023 (10) | −0.0050 (11) |
N3 | 0.0196 (12) | 0.0203 (11) | 0.0203 (12) | 0.0006 (8) | 0.0036 (9) | −0.0008 (8) |
N4 | 0.0223 (12) | 0.0226 (12) | 0.0204 (12) | 0.0018 (10) | 0.0037 (10) | 0.0034 (10) |
N5 | 0.0212 (11) | 0.0294 (12) | 0.0305 (14) | 0.0031 (10) | 0.0019 (10) | −0.0050 (10) |
C1 | 0.0249 (14) | 0.0219 (14) | 0.0254 (15) | 0.0006 (11) | 0.0038 (12) | 0.0017 (11) |
C2 | 0.0258 (15) | 0.0308 (15) | 0.0239 (15) | 0.0043 (12) | 0.0060 (12) | 0.0043 (12) |
C3 | 0.0171 (13) | 0.0274 (14) | 0.0251 (15) | −0.0001 (11) | 0.0056 (11) | −0.0034 (11) |
C4 | 0.0351 (16) | 0.0227 (15) | 0.0426 (18) | 0.0058 (12) | 0.0008 (14) | −0.0025 (12) |
C5 | 0.0247 (15) | 0.0183 (13) | 0.0258 (16) | −0.0015 (10) | 0.0033 (12) | −0.0043 (11) |
C6 | 0.0223 (14) | 0.0264 (15) | 0.0247 (15) | −0.0048 (12) | 0.0058 (11) | −0.0056 (12) |
C7 | 0.0167 (13) | 0.0229 (14) | 0.0242 (15) | 0.0025 (10) | 0.0088 (11) | 0.0005 (11) |
C8 | 0.0326 (15) | 0.0213 (14) | 0.0416 (18) | −0.0033 (12) | 0.0075 (13) | −0.0019 (12) |
Ag1—N1 | 2.090 (2) | N4—C6 | 1.384 (4) |
Ag1—N3 | 2.091 (2) | N4—H4 | 0.844 (10) |
O1—N5 | 1.260 (3) | C1—C2 | 1.342 (4) |
O2—N5 | 1.250 (3) | C1—H1 | 0.9300 |
O3—N5 | 1.238 (3) | C2—H2A | 0.9300 |
O1w—H11 | 0.845 (10) | C3—C4 | 1.481 (4) |
O1w—H12 | 0.848 (10) | C4—H4A | 0.9600 |
O2w—H21 | 0.844 (10) | C4—H4B | 0.9600 |
O2w—H22 | 0.842 (10) | C4—H4C | 0.9600 |
N1—C3 | 1.326 (3) | C5—C6 | 1.344 (4) |
N1—C1 | 1.385 (3) | C5—H5 | 0.9300 |
N2—C3 | 1.347 (4) | C6—H6 | 0.9300 |
N2—C2 | 1.377 (4) | C7—C8 | 1.483 (3) |
N2—H2 | 0.856 (10) | C8—H8A | 0.9600 |
N3—C7 | 1.323 (3) | C8—H8B | 0.9600 |
N3—C5 | 1.381 (3) | C8—H8C | 0.9600 |
N4—C7 | 1.342 (3) | ||
N1—Ag1—N3 | 178.27 (7) | N1—C3—N2 | 110.0 (2) |
H11—O1w—H12 | 106 (4) | N1—C3—C4 | 126.5 (2) |
H21—O2w—H22 | 105 (3) | N2—C3—C4 | 123.5 (2) |
C3—N1—C1 | 106.2 (2) | C3—C4—H4A | 109.5 |
C3—N1—Ag1 | 125.87 (18) | C3—C4—H4B | 109.5 |
C1—N1—Ag1 | 127.32 (17) | H4A—C4—H4B | 109.5 |
C3—N2—C2 | 108.0 (2) | C3—C4—H4C | 109.5 |
C3—N2—H2 | 121 (2) | H4A—C4—H4C | 109.5 |
C2—N2—H2 | 131 (2) | H4B—C4—H4C | 109.5 |
C7—N3—C5 | 106.7 (2) | C6—C5—N3 | 109.3 (2) |
C7—N3—Ag1 | 126.03 (17) | C6—C5—H5 | 125.4 |
C5—N3—Ag1 | 126.92 (16) | N3—C5—H5 | 125.4 |
C7—N4—C6 | 108.0 (2) | C5—C6—N4 | 106.1 (2) |
C7—N4—H4 | 125.1 (18) | C5—C6—H6 | 127.0 |
C6—N4—H4 | 126.9 (19) | N4—C6—H6 | 127.0 |
O3—N5—O2 | 120.2 (2) | N3—C7—N4 | 109.9 (2) |
O3—N5—O1 | 119.9 (2) | N3—C7—C8 | 126.5 (2) |
O2—N5—O1 | 119.9 (2) | N4—C7—C8 | 123.6 (2) |
C2—C1—N1 | 109.5 (2) | C7—C8—H8A | 109.5 |
C2—C1—H1 | 125.3 | C7—C8—H8B | 109.5 |
N1—C1—H1 | 125.3 | H8A—C8—H8B | 109.5 |
C1—C2—N2 | 106.3 (2) | C7—C8—H8C | 109.5 |
C1—C2—H2A | 126.9 | H8A—C8—H8C | 109.5 |
N2—C2—H2A | 126.9 | H8B—C8—H8C | 109.5 |
C3—N1—C1—C2 | −0.2 (3) | C7—N3—C5—C6 | 0.1 (3) |
Ag1—N1—C1—C2 | −171.9 (2) | Ag1—N3—C5—C6 | −173.71 (19) |
N1—C1—C2—N2 | 0.4 (3) | N3—C5—C6—N4 | 0.5 (3) |
C3—N2—C2—C1 | −0.5 (3) | C7—N4—C6—C5 | −1.0 (3) |
C1—N1—C3—N2 | −0.1 (3) | C5—N3—C7—N4 | −0.8 (3) |
Ag1—N1—C3—N2 | 171.74 (19) | Ag1—N3—C7—N4 | 173.13 (18) |
C1—N1—C3—C4 | −179.5 (3) | C5—N3—C7—C8 | 178.6 (2) |
Ag1—N1—C3—C4 | −7.7 (4) | Ag1—N3—C7—C8 | −7.5 (4) |
C2—N2—C3—N1 | 0.4 (3) | C6—N4—C7—N3 | 1.1 (3) |
C2—N2—C3—C4 | 179.8 (2) | C6—N4—C7—C8 | −178.2 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1w | 0.86 (1) | 1.99 (1) | 2.838 (3) | 169 (3) |
N4—H4···O1wi | 0.84 (1) | 1.99 (1) | 2.837 (3) | 178 (3) |
O1w—H11···O2w | 0.85 (1) | 1.89 (1) | 2.726 (3) | 170 (4) |
O1w—H12···O1 | 0.85 (1) | 1.99 (1) | 2.826 (3) | 171 (3) |
O2w—H21···O1ii | 0.84 (1) | 2.02 (1) | 2.867 (3) | 179 (4) |
O2w—H22···O2iii | 0.84 (1) | 2.15 (2) | 2.955 (3) | 159 (3) |
Symmetry codes: (i) x+1, y, z+1; (ii) x+1, y, z; (iii) x+1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ag(C4H6N2)2]NO3·2H2O |
Mr | 370.13 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 295 |
a, b, c (Å) | 6.8001 (4), 17.0196 (9), 12.1453 (7) |
β (°) | 101.691 (1) |
V (Å3) | 1376.48 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.49 |
Crystal size (mm) | 0.21 × 0.19 × 0.17 |
Data collection | |
Diffractometer | Bruker APEX2 diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.745, 0.786 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7483, 2721, 2083 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.618 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.073, 0.99 |
No. of reflections | 2721 |
No. of parameters | 198 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.54, −0.34 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1w | 0.86 (1) | 1.99 (1) | 2.838 (3) | 169 (3) |
N4—H4···O1wi | 0.84 (1) | 1.99 (1) | 2.837 (3) | 178 (3) |
O1w—H11···O2w | 0.85 (1) | 1.89 (1) | 2.726 (3) | 170 (4) |
O1w—H12···O1 | 0.85 (1) | 1.99 (1) | 2.826 (3) | 171 (3) |
O2w—H21···O1ii | 0.84 (1) | 2.02 (1) | 2.867 (3) | 179 (4) |
O2w—H22···O2iii | 0.84 (1) | 2.15 (2) | 2.955 (3) | 159 (3) |
Symmetry codes: (i) x+1, y, z+1; (ii) x+1, y, z; (iii) x+1/2, −y+1/2, z−1/2. |
Acknowledgements
We thank Tianjin Agricultural University and the University of Malaya for supporting this study.
References
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Liu, J., Su, X.-Y., Wang, W.-H., Mao, Z.-H. & Xie, R.-G. (2006). Acta Cryst. E62, m1173–m1174. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2009). publCIF. In preparation. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.