organic compounds
An orthorhombic polymorph of 5-[(4-methylphenyl)diazenyl]salicylaldehyde
aDepartment of Chemistry, North-Eastern Hill University, NEHU Permanent Campus, Umshing, Shillong 793 022, India, bDepartment of Chemistry, The University of Texas at San Antonio, One UTSA Circle, San Antonio, Texas 78249-0698, USA, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The title compound, C14H12N2O2, is an orthorhombic polymorph of the previously reported monoclinic form [Bakir et al. (2005). Acta Cryst. E61, o1611–o1613]. The dihedral angle between the aromatic rings is 4.32 (13)°. The molecular structures of the two polymorphs, including short intramolecular O—H⋯O hydrogen bonds between the the hydroxy and keto groups, are quite similar but their crystal packings are distinct. Unlike the monoclinic form, in which centrosymmetrically related hydroxy and keto groups form {⋯H⋯O}2 synthons via weak O—H⋯O contacts, leading to dimeric aggregates, in the orthorhombic form, the hydrogen bonding between these groups leads to the formation of supramolecular chains orientated along the a axis.
Related literature
For the structure of the monoclinic polymorph, see: Bakir et al. (2005). For background and motivation for the synthesis of the title compound, see: Basu Baul et al. (2005). For the synthesis, see: Sarma et al. (1993).
Experimental
Crystal data
|
Data collection
|
Refinement
|
Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809046868/hb5215sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809046868/hb5215Isup2.hkl
Compound (I) was prepared by reacting p-tolyldiazonium chloride with o-hydroxybenzaldehyde using a previously reported method (Sarma et al., 1993). Orange crystals were obtained by slow evaporation of a methanol solution of (I); m.pt. 421–423 K.
Carbon-bound H-atoms were placed in calculated positions (C–H 0.95–0.98 Å) and were included in the
in the riding model approximation with Uiso(H) set to 1.2–1.5Ueq(C). The O–bound H-atom was located in a difference Fourier map and was refined with an O–H restraint of 0.840±0.001 Å, and with Uiso(H) = 1.5Ueq(O).Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C14H12N2O2 | F(000) = 1008 |
Mr = 240.26 | Dx = 1.380 Mg m−3 |
Orthorhombic, Pbna | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2b | Cell parameters from 8423 reflections |
a = 6.016 (4) Å | θ = 3.0–40.5° |
b = 14.299 (9) Å | µ = 0.09 mm−1 |
c = 26.878 (17) Å | T = 98 K |
V = 2312 (3) Å3 | Prism, orange |
Z = 8 | 0.25 × 0.18 × 0.15 mm |
Rigaku Saturn724 diffractometer | 1774 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.082 |
Graphite monochromator | θmax = 25.0°, θmin = 2.9° |
Detector resolution: 28.5714 pixels mm-1 | h = −5→7 |
ω scans | k = −17→17 |
12587 measured reflections | l = −31→31 |
2032 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.081 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.208 | H-atom parameters constrained |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0971P)2 + 2.61P] where P = (Fo2 + 2Fc2)/3 |
2032 reflections | (Δ/σ)max < 0.001 |
167 parameters | Δρmax = 0.40 e Å−3 |
1 restraint | Δρmin = −0.32 e Å−3 |
C14H12N2O2 | V = 2312 (3) Å3 |
Mr = 240.26 | Z = 8 |
Orthorhombic, Pbna | Mo Kα radiation |
a = 6.016 (4) Å | µ = 0.09 mm−1 |
b = 14.299 (9) Å | T = 98 K |
c = 26.878 (17) Å | 0.25 × 0.18 × 0.15 mm |
Rigaku Saturn724 diffractometer | 1774 reflections with I > 2σ(I) |
12587 measured reflections | Rint = 0.082 |
2032 independent reflections |
R[F2 > 2σ(F2)] = 0.081 | 1 restraint |
wR(F2) = 0.208 | H-atom parameters constrained |
S = 1.14 | Δρmax = 0.40 e Å−3 |
2032 reflections | Δρmin = −0.32 e Å−3 |
167 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.5504 (3) | 0.03566 (15) | 0.16786 (7) | 0.0290 (5) | |
H1O | 0.4957 | 0.0411 | 0.1965 | 0.043* | |
O2 | 0.2044 (3) | 0.07693 (15) | 0.22794 (7) | 0.0340 (6) | |
N1 | −0.0156 (4) | 0.13491 (16) | 0.01161 (7) | 0.0245 (6) | |
N2 | 0.0617 (4) | 0.12120 (16) | −0.03149 (8) | 0.0251 (6) | |
C1 | 0.4095 (4) | 0.0603 (2) | 0.13084 (9) | 0.0248 (6) | |
C2 | 0.1931 (4) | 0.09462 (19) | 0.13980 (9) | 0.0242 (6) | |
C3 | 0.0583 (4) | 0.12043 (19) | 0.09890 (9) | 0.0239 (6) | |
H3 | −0.0864 | 0.1446 | 0.1047 | 0.029* | |
C4 | 0.1341 (4) | 0.11101 (18) | 0.05081 (9) | 0.0226 (6) | |
C5 | 0.3522 (5) | 0.07589 (19) | 0.04248 (9) | 0.0250 (6) | |
H5 | 0.4058 | 0.0698 | 0.0094 | 0.030* | |
C6 | 0.4862 (4) | 0.0508 (2) | 0.08146 (9) | 0.0252 (6) | |
H6 | 0.6309 | 0.0269 | 0.0753 | 0.030* | |
C7 | 0.1029 (5) | 0.1000 (2) | 0.18997 (10) | 0.0285 (7) | |
H7 | −0.0444 | 0.1228 | 0.1938 | 0.034* | |
C8 | −0.0859 (4) | 0.14457 (19) | −0.07115 (9) | 0.0239 (6) | |
C9 | −0.0071 (5) | 0.12717 (19) | −0.11890 (9) | 0.0263 (7) | |
H9 | 0.1367 | 0.1010 | −0.1234 | 0.032* | |
C10 | −0.1380 (5) | 0.1479 (2) | −0.16010 (10) | 0.0276 (7) | |
H10 | −0.0824 | 0.1359 | −0.1926 | 0.033* | |
C11 | −0.3501 (5) | 0.18602 (19) | −0.15435 (9) | 0.0265 (7) | |
C12 | −0.4272 (5) | 0.20340 (19) | −0.10605 (9) | 0.0262 (6) | |
H12 | −0.5709 | 0.2297 | −0.1015 | 0.031* | |
C13 | −0.2985 (5) | 0.18306 (19) | −0.06474 (10) | 0.0256 (6) | |
H13 | −0.3537 | 0.1951 | −0.0323 | 0.031* | |
C14 | −0.4928 (5) | 0.2058 (2) | −0.19935 (10) | 0.0341 (7) | |
H14A | −0.4410 | 0.2631 | −0.2156 | 0.051* | |
H14B | −0.6477 | 0.2137 | −0.1889 | 0.051* | |
H14C | −0.4823 | 0.1533 | −0.2227 | 0.051* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0230 (11) | 0.0436 (13) | 0.0203 (10) | 0.0040 (9) | −0.0026 (7) | −0.0010 (8) |
O2 | 0.0260 (11) | 0.0533 (14) | 0.0227 (10) | 0.0007 (9) | −0.0016 (8) | 0.0003 (9) |
N1 | 0.0246 (12) | 0.0289 (13) | 0.0202 (12) | 0.0002 (10) | −0.0018 (9) | 0.0010 (9) |
N2 | 0.0238 (12) | 0.0293 (13) | 0.0221 (12) | −0.0007 (10) | −0.0029 (10) | 0.0001 (9) |
C1 | 0.0214 (14) | 0.0306 (15) | 0.0224 (13) | −0.0030 (11) | −0.0023 (10) | −0.0018 (11) |
C2 | 0.0223 (13) | 0.0280 (15) | 0.0222 (13) | −0.0001 (11) | 0.0021 (11) | −0.0006 (10) |
C3 | 0.0197 (13) | 0.0282 (14) | 0.0239 (14) | 0.0017 (11) | −0.0011 (11) | −0.0012 (10) |
C4 | 0.0212 (14) | 0.0248 (14) | 0.0217 (13) | −0.0024 (10) | −0.0033 (11) | 0.0005 (10) |
C5 | 0.0242 (14) | 0.0306 (15) | 0.0203 (12) | −0.0003 (11) | 0.0014 (11) | −0.0021 (11) |
C6 | 0.0191 (13) | 0.0312 (15) | 0.0252 (13) | 0.0002 (11) | 0.0008 (11) | −0.0021 (11) |
C7 | 0.0240 (14) | 0.0362 (16) | 0.0255 (14) | 0.0008 (12) | 0.0011 (12) | −0.0004 (11) |
C8 | 0.0231 (14) | 0.0267 (15) | 0.0219 (13) | −0.0015 (11) | −0.0026 (11) | 0.0001 (10) |
C9 | 0.0241 (14) | 0.0298 (15) | 0.0251 (14) | −0.0025 (11) | −0.0012 (11) | 0.0007 (11) |
C10 | 0.0273 (14) | 0.0350 (16) | 0.0204 (13) | −0.0023 (12) | 0.0020 (11) | −0.0014 (11) |
C11 | 0.0279 (15) | 0.0258 (15) | 0.0258 (14) | −0.0033 (11) | −0.0034 (12) | 0.0009 (11) |
C12 | 0.0223 (14) | 0.0277 (15) | 0.0285 (14) | −0.0005 (11) | −0.0004 (11) | 0.0007 (11) |
C13 | 0.0278 (15) | 0.0256 (15) | 0.0234 (13) | −0.0016 (11) | 0.0002 (11) | 0.0009 (10) |
C14 | 0.0369 (16) | 0.0407 (18) | 0.0248 (14) | 0.0037 (14) | −0.0051 (12) | 0.0033 (12) |
O1—C1 | 1.353 (3) | C7—H7 | 0.9500 |
O1—H1O | 0.8400 | C8—C9 | 1.391 (4) |
O2—C7 | 1.234 (3) | C8—C13 | 1.403 (4) |
N1—N2 | 1.264 (3) | C9—C10 | 1.391 (4) |
N1—C4 | 1.428 (3) | C9—H9 | 0.9500 |
N2—C8 | 1.427 (3) | C10—C11 | 1.396 (4) |
C1—C6 | 1.411 (4) | C10—H10 | 0.9500 |
C1—C2 | 1.413 (4) | C11—C12 | 1.401 (4) |
C2—C3 | 1.415 (4) | C11—C14 | 1.510 (4) |
C2—C7 | 1.455 (4) | C12—C13 | 1.385 (4) |
C3—C4 | 1.377 (4) | C12—H12 | 0.9500 |
C3—H3 | 0.9500 | C13—H13 | 0.9500 |
C4—C5 | 1.423 (4) | C14—H14A | 0.9800 |
C5—C6 | 1.370 (4) | C14—H14B | 0.9800 |
C5—H5 | 0.9500 | C14—H14C | 0.9800 |
C6—H6 | 0.9500 | ||
C1—O1—H1O | 113.8 | C9—C8—C13 | 119.6 (2) |
N2—N1—C4 | 114.0 (2) | C9—C8—N2 | 115.8 (2) |
N1—N2—C8 | 114.8 (2) | C13—C8—N2 | 124.6 (2) |
O1—C1—C6 | 117.5 (2) | C8—C9—C10 | 120.2 (3) |
O1—C1—C2 | 122.8 (2) | C8—C9—H9 | 119.9 |
C6—C1—C2 | 119.7 (2) | C10—C9—H9 | 119.9 |
C1—C2—C3 | 119.1 (2) | C9—C10—C11 | 120.8 (2) |
C1—C2—C7 | 121.3 (2) | C9—C10—H10 | 119.6 |
C3—C2—C7 | 119.5 (2) | C11—C10—H10 | 119.6 |
C4—C3—C2 | 120.9 (2) | C10—C11—C12 | 118.3 (2) |
C4—C3—H3 | 119.5 | C10—C11—C14 | 120.3 (2) |
C2—C3—H3 | 119.5 | C12—C11—C14 | 121.4 (3) |
C3—C4—C5 | 119.2 (2) | C13—C12—C11 | 121.4 (3) |
C3—C4—N1 | 117.4 (2) | C13—C12—H12 | 119.3 |
C5—C4—N1 | 123.4 (2) | C11—C12—H12 | 119.3 |
C6—C5—C4 | 121.0 (2) | C12—C13—C8 | 119.6 (2) |
C6—C5—H5 | 119.5 | C12—C13—H13 | 120.2 |
C4—C5—H5 | 119.5 | C8—C13—H13 | 120.2 |
C5—C6—C1 | 120.1 (2) | C11—C14—H14A | 109.5 |
C5—C6—H6 | 119.9 | C11—C14—H14B | 109.5 |
C1—C6—H6 | 119.9 | H14A—C14—H14B | 109.5 |
O2—C7—C2 | 124.6 (3) | C11—C14—H14C | 109.5 |
O2—C7—H7 | 117.7 | H14A—C14—H14C | 109.5 |
C2—C7—H7 | 117.7 | H14B—C14—H14C | 109.5 |
C4—N1—N2—C8 | 179.9 (2) | C2—C1—C6—C5 | 0.8 (4) |
O1—C1—C2—C3 | 178.8 (2) | C1—C2—C7—O2 | 0.9 (5) |
C6—C1—C2—C3 | −1.1 (4) | C3—C2—C7—O2 | 178.1 (3) |
O1—C1—C2—C7 | −4.0 (4) | N1—N2—C8—C9 | −178.0 (2) |
C6—C1—C2—C7 | 176.1 (3) | N1—N2—C8—C13 | 2.2 (4) |
C1—C2—C3—C4 | 1.1 (4) | C13—C8—C9—C10 | 0.1 (4) |
C7—C2—C3—C4 | −176.2 (3) | N2—C8—C9—C10 | −179.8 (2) |
C2—C3—C4—C5 | −0.8 (4) | C8—C9—C10—C11 | −0.2 (4) |
C2—C3—C4—N1 | 177.4 (2) | C9—C10—C11—C12 | 0.3 (4) |
N2—N1—C4—C3 | −177.4 (2) | C9—C10—C11—C14 | −178.4 (3) |
N2—N1—C4—C5 | 0.7 (4) | C10—C11—C12—C13 | −0.4 (4) |
C3—C4—C5—C6 | 0.6 (4) | C14—C11—C12—C13 | 178.3 (3) |
N1—C4—C5—C6 | −177.6 (3) | C11—C12—C13—C8 | 0.2 (4) |
C4—C5—C6—C1 | −0.6 (4) | C9—C8—C13—C12 | −0.1 (4) |
O1—C1—C6—C5 | −179.0 (2) | N2—C8—C13—C12 | 179.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···O2 | 0.84 | 2.01 | 2.700 (3) | 139 |
O1—H1o···O2i | 0.84 | 2.44 | 3.008 (3) | 125 |
Symmetry code: (i) x+1/2, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H12N2O2 |
Mr | 240.26 |
Crystal system, space group | Orthorhombic, Pbna |
Temperature (K) | 98 |
a, b, c (Å) | 6.016 (4), 14.299 (9), 26.878 (17) |
V (Å3) | 2312 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.25 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Rigaku Saturn724 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12587, 2032, 1774 |
Rint | 0.082 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.081, 0.208, 1.14 |
No. of reflections | 2032 |
No. of parameters | 167 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.40, −0.32 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···O2 | 0.84 | 2.01 | 2.700 (3) | 139 |
O1—H1o···O2i | 0.84 | 2.44 | 3.008 (3) | 125 |
Symmetry code: (i) x+1/2, y, −z+1/2. |
Footnotes
‡Additional correspondence author, e-mail: basubaul@hotmail.com.
Acknowledgements
The financial support of the Department of Science & Technology, New Delhi, India (grant No. SR/S1/IC-03/2005, TSBB) and the University Grants Commission, New Delhi, India, through SAP–DSA (Phase-III), is gratefully acknowledged.
References
Bakir, M., Harewood, G. R., Holder, A., Hassan, I., Dasgupta, T. P., Maragh, P. & Singh-Wilmot, M. (2005). Acta Cryst. E61, o1611–o1613. Web of Science CSD CrossRef IUCr Journals Google Scholar
Basu Baul, T. S., Singh, K. S., Holčapek, M., Jirásko, R., Linden, A., Song, X., Zapata, A. & Eng, G. (2005). Appl. Organomet. Chem. 19, 935–944. Web of Science CSD CrossRef CAS Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Rigaku/MSC (2005). CrystalClear. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sarma, K., Basu Baul, T. S., Basaiawmoit, W. L. & Saran, R. (1993). Spectrochim. Acta Part A, 49, 1027. CrossRef Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound, (I), was isolated during on-going studies into the biological activities of their organotin complexes (Basu Baul et al., 2005). The structure of (I) represents an orthorhombic polymorph of a previously reported monoclinic form (Bakir et al., 2005). The molecular structure of (I), Fig. 1, closely resembles that of the monoclinic form, with comparable geometric parameters being equal within experimental error. The overall molecule of (I) is planar as seen in the values of the C1/C2/C3/O2, C5/C4/N1/N2 and C9/C8/N2/N1 torsion angles of 0.9 (4), 0.7 (4) and -178.0 (2) °, respectively. In each of the polymorphs, a short intramolecular O–H···O hydrogen bond is formed between the hydroxyl and keto groups, Table 1. The key difference between the polymorphs rests with the nature of the weaker O–H···O intermolecular interactions formed between these groups. Thus, in the previously reported monoclinic form, the crystal structure comprises the packing of centrosymmetric dimers linked by a four-membered {···H···O}2 synthon. By contrast, in (I) the intermolecular hydrogen bonding between these groups leads to 1-D supramolecular chains aligned along the a direction, Table 1 and Fig. 2. The crystal structure comprises packing of these chains as illustrated in Fig. 3.