organic compounds
(S)-6-Chloro-4-cyclopropylethynyl-4-trifluoromethyl-1H-3,1-benzoxazin-2(4H)-one
aSubsecretaria Ceprocor, Ministerio de Ciência y Tecnologia de Córdoba, Alvarez de Arenales 230, 5014 Córdoba, Argentina, bDepartment of Chemistry, University of Aberdeen, Old Aberdeen, AB15 5NY, Scotland, cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, dCentro de Desenvolvimento Tecnológico em Saúde (CDTS), Fundação Oswald Cruz (FIOCRUZ), Casa Amarela, Campus de Manguinhos Av. Brasil 4365, 21040-900, Rio de Janeiro, RJ, Brazil, and eCHEMSOL, 1 Harcourt Road, Aberdeen AB15 5NY, Scotland
*Correspondence e-mail: edward.tiekink@gmail.com
Two independent molecules comprise the crystallographic 14H9ClF3NO2, and these have noteworthy differences in conformation. The major difference relates to the orientation of the 2-cyclopropylethynyl residue relative to the six-membered heterocycle: this approaches an orthogonal disposition in molecule a compared to a more flattened conformation in molecule b, the difference being reflected in the Oring—C—C—Cethyne torsion angles of 65 (4) and 159 (5)°, respectively. The independent molecules are connected via the eight-membered {⋯HNC (O)}2 amide synthon. Disorder is noted in the cyclopropane ring of molecule b in that two orientations of equal weight were discerned.
in the title antiretroviral agent Efavirenz, CRelated literature
For background to the use of Efavirenz, see: Adkins & Noble (1998); Gazzard (1999); de Clercq et al. (2009); Markowitz et al. (2009); Young et al. (2009).
Experimental
Crystal data
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Data collection: COLLECT (Hooft, 1998); cell DENZO (Otwinowski & Minor, 1997) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
10.1107/S1600536809049101/hg2596sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809049101/hg2596Isup2.hkl
Crystals used in the crystallographic study were grown from aqueous methanol solution of (I).
The C-bound H atoms were geometrically placed (C–H = 0.95–1.00 Å) and refined as riding with Uiso(H) = 1.2Ueq(C). The amide-N H atoms were refined freely, see Table 1 for distances. Disorder was resolved for the cyclopropane ring of molecule b in that two positions, of equal weight (from refinement), were discerned for one of wing C atoms, C14b, so that each component of the disordered ring shared two atoms, C12b and C13b.
Data collection: COLLECT (Hooft, 1998); cell
DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); data reduction: DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2009).C14H9ClF3NO2 | F(000) = 1280 |
Mr = 315.67 | Dx = 1.519 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 3202 reflections |
a = 8.1403 (4) Å | θ = 2.9–27.5° |
b = 13.5859 (11) Å | µ = 0.31 mm−1 |
c = 24.962 (2) Å | T = 120 K |
V = 2760.6 (3) Å3 | Rod, colourless |
Z = 8 | 0.28 × 0.08 × 0.04 mm |
Bruker–Nonius 95mm CCD camera on κ-goniostat diffractometer | 6099 independent reflections |
Radiation source: Bruker-Nonius FR591 rotating anode | 3675 reflections with I > 2σ(I) |
10 cm confocal mirrors monochromator | Rint = 0.064 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 2.9° |
ϕ and ω scans | h = −10→6 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | k = −10→17 |
Tmin = 0.917, Tmax = 0.988 | l = −32→30 |
18370 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.062 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.127 | w = 1/[σ2(Fo2) + (0.0502P)2 + 0.0117P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
6099 reflections | Δρmax = 0.26 e Å−3 |
395 parameters | Δρmin = −0.25 e Å−3 |
5 restraints | Absolute structure: Flack (1983), 2598 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.14 (8) |
C14H9ClF3NO2 | V = 2760.6 (3) Å3 |
Mr = 315.67 | Z = 8 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 8.1403 (4) Å | µ = 0.31 mm−1 |
b = 13.5859 (11) Å | T = 120 K |
c = 24.962 (2) Å | 0.28 × 0.08 × 0.04 mm |
Bruker–Nonius 95mm CCD camera on κ-goniostat diffractometer | 6099 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 3675 reflections with I > 2σ(I) |
Tmin = 0.917, Tmax = 0.988 | Rint = 0.064 |
18370 measured reflections |
R[F2 > 2σ(F2)] = 0.062 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.127 | Δρmax = 0.26 e Å−3 |
S = 1.03 | Δρmin = −0.25 e Å−3 |
6099 reflections | Absolute structure: Flack (1983), 2598 Friedel pairs |
395 parameters | Absolute structure parameter: 0.14 (8) |
5 restraints |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1A | −0.51005 (11) | 0.32715 (8) | 0.73151 (5) | 0.0602 (3) | |
O2A | 0.3501 (3) | 0.5959 (2) | 0.74717 (10) | 0.0507 (8) | |
O3A | 0.1228 (3) | 0.59292 (19) | 0.69880 (10) | 0.0370 (6) | |
N1A | 0.1615 (4) | 0.4768 (2) | 0.76479 (13) | 0.0358 (8) | |
H1A | 0.207 (5) | 0.457 (3) | 0.7936 (15) | 0.043* | |
F1A | −0.0025 (3) | 0.65810 (18) | 0.60948 (9) | 0.0526 (6) | |
F2A | −0.1987 (3) | 0.55204 (18) | 0.60690 (8) | 0.0512 (6) | |
F3A | −0.1848 (3) | 0.65650 (16) | 0.67151 (8) | 0.0497 (6) | |
C2A | 0.2190 (5) | 0.5547 (3) | 0.73799 (15) | 0.0377 (9) | |
C4A | 0.0094 (5) | 0.5259 (3) | 0.67159 (14) | 0.0348 (9) | |
C4AA | −0.0859 (4) | 0.4654 (3) | 0.71220 (14) | 0.0334 (9) | |
C5A | −0.2433 (4) | 0.4314 (3) | 0.70474 (15) | 0.0343 (9) | |
H5A | −0.3042 | 0.4503 | 0.6739 | 0.045* | |
C6A | −0.3118 (4) | 0.3698 (3) | 0.74239 (17) | 0.0434 (10) | |
C7A | −0.2254 (4) | 0.3397 (3) | 0.78715 (16) | 0.0426 (10) | |
H7A | −0.2726 | 0.2948 | 0.8119 | 0.055* | |
C8A | −0.0678 (4) | 0.3764 (3) | 0.79520 (16) | 0.0369 (9) | |
H8A | −0.0077 | 0.3583 | 0.8263 | 0.048* | |
C8AA | 0.0015 (4) | 0.4393 (3) | 0.75789 (14) | 0.0326 (9) | |
C9A | −0.0952 (5) | 0.5989 (3) | 0.63969 (15) | 0.0398 (10) | |
C10A | 0.1021 (4) | 0.4604 (3) | 0.63575 (16) | 0.0366 (9) | |
C11A | 0.1844 (5) | 0.4037 (3) | 0.61164 (16) | 0.0411 (10) | |
C12A | 0.2841 (5) | 0.3343 (3) | 0.58197 (16) | 0.0507 (11) | |
H12A | 0.2696 | 0.2635 | 0.5919 | 0.061* | |
C13A | 0.3236 (5) | 0.3538 (3) | 0.52437 (17) | 0.0530 (12) | |
H13A | 0.3292 | 0.2967 | 0.4998 | 0.064* | |
H13B | 0.2802 | 0.4150 | 0.5081 | 0.064* | |
C14A | 0.4533 (5) | 0.3634 (4) | 0.56533 (18) | 0.0597 (13) | |
H14A | 0.4909 | 0.4306 | 0.5746 | 0.072* | |
H14B | 0.5400 | 0.3123 | 0.5663 | 0.072* | |
Cl1B | 1.21317 (12) | 0.70229 (9) | 0.86981 (4) | 0.0532 (3) | |
O2B | 0.3568 (3) | 0.4274 (2) | 0.85483 (11) | 0.0607 (9) | |
O3B | 0.5822 (3) | 0.4297 (2) | 0.90321 (11) | 0.0470 (8) | |
N1B | 0.5495 (4) | 0.5424 (3) | 0.83487 (13) | 0.0392 (9) | |
H1C | 0.498 (5) | 0.566 (3) | 0.8061 (15) | 0.047* | |
F1B | 0.7286 (3) | 0.60158 (18) | 1.00057 (9) | 0.0534 (6) | |
F2B | 0.5402 (3) | 0.49001 (19) | 1.00565 (9) | 0.0612 (7) | |
F3B | 0.5136 (3) | 0.61081 (19) | 0.95046 (9) | 0.0539 (6) | |
C2B | 0.4865 (5) | 0.4670 (3) | 0.86305 (16) | 0.0445 (10) | |
C4B | 0.7093 (5) | 0.4883 (3) | 0.92846 (15) | 0.0388 (9) | |
C4BA | 0.7914 (4) | 0.5559 (3) | 0.88837 (14) | 0.0333 (9) | |
C5B | 0.9506 (4) | 0.5922 (3) | 0.89599 (15) | 0.0360 (9) | |
H5C | 1.0124 | 0.5729 | 0.9265 | 0.047* | |
C6B | 1.0174 (4) | 0.6561 (3) | 0.85898 (15) | 0.0375 (9) | |
C7B | 0.9312 (4) | 0.6826 (3) | 0.81354 (15) | 0.0372 (10) | |
H7C | 0.9780 | 0.7271 | 0.7885 | 0.048* | |
C8B | 0.7766 (4) | 0.6439 (3) | 0.80484 (15) | 0.0356 (9) | |
H8C | 0.7182 | 0.6598 | 0.7731 | 0.046* | |
C8BA | 0.7071 (4) | 0.5820 (3) | 0.84245 (15) | 0.0344 (9) | |
C9B | 0.6220 (5) | 0.5474 (3) | 0.97213 (15) | 0.0440 (11) | |
C10B | 0.8249 (5) | 0.4199 (3) | 0.95367 (16) | 0.0461 (11) | |
C11B | 0.9272 (6) | 0.3707 (3) | 0.97389 (19) | 0.0599 (13) | |
C12B | 1.0542 (6) | 0.3081 (4) | 0.9974 (2) | 0.0782 (17) | |
H12C | 1.0219 | 0.2386 | 1.0052 | 0.094* | 0.50 |
H12E | 1.0798 | 0.2445 | 0.9791 | 0.094* | 0.50 |
C13B | 1.1770 (9) | 0.3495 (4) | 1.0313 (4) | 0.120 (3) | |
H13C | 1.2225 | 0.3075 | 1.0601 | 0.144* | 0.50 |
H13D | 1.1678 | 0.4202 | 1.0404 | 0.144* | 0.50 |
H13E | 1.1876 | 0.4221 | 1.0312 | 0.144* | 0.50 |
H13F | 1.2834 | 0.3143 | 1.0332 | 0.144* | 0.50 |
C14B | 1.2189 (13) | 0.3225 (12) | 0.9731 (6) | 0.135 (6) | 0.50 |
H14C | 1.2329 | 0.3767 | 0.9470 | 0.162* | 0.50 |
H14D | 1.2878 | 0.2637 | 0.9667 | 0.162* | 0.50 |
C14C | 1.0387 (19) | 0.3074 (14) | 1.0626 (5) | 0.165 (9) | 0.50 |
H14E | 0.9600 | 0.3532 | 1.0796 | 0.198* | 0.50 |
H14F | 1.0567 | 0.2444 | 1.0817 | 0.198* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.0346 (5) | 0.0526 (7) | 0.0935 (9) | −0.0044 (5) | 0.0009 (5) | 0.0029 (7) |
O2A | 0.0581 (18) | 0.0487 (19) | 0.0454 (18) | −0.0176 (14) | −0.0172 (14) | 0.0066 (15) |
O3A | 0.0439 (15) | 0.0350 (17) | 0.0321 (15) | −0.0036 (12) | −0.0100 (12) | 0.0013 (13) |
N1A | 0.0408 (19) | 0.034 (2) | 0.033 (2) | −0.0030 (14) | −0.0090 (14) | 0.0037 (17) |
F1A | 0.0536 (13) | 0.0630 (16) | 0.0411 (14) | 0.0041 (13) | 0.0026 (11) | 0.0163 (13) |
F2A | 0.0464 (13) | 0.0691 (17) | 0.0380 (13) | 0.0053 (12) | −0.0114 (11) | −0.0007 (13) |
F3A | 0.0596 (14) | 0.0504 (15) | 0.0393 (13) | 0.0158 (12) | 0.0032 (10) | 0.0000 (12) |
C2A | 0.046 (2) | 0.037 (2) | 0.031 (2) | −0.004 (2) | −0.0032 (19) | 0.001 (2) |
C4A | 0.036 (2) | 0.039 (2) | 0.029 (2) | 0.0024 (18) | −0.0054 (16) | −0.0042 (19) |
C4AA | 0.040 (2) | 0.031 (2) | 0.030 (2) | 0.0059 (17) | 0.0014 (16) | −0.0010 (19) |
C5A | 0.031 (2) | 0.034 (2) | 0.037 (2) | 0.0050 (16) | −0.0057 (16) | −0.0082 (19) |
C6A | 0.039 (2) | 0.036 (3) | 0.055 (3) | 0.0028 (18) | 0.005 (2) | −0.006 (2) |
C7A | 0.045 (2) | 0.033 (2) | 0.049 (3) | 0.0018 (19) | 0.011 (2) | −0.003 (2) |
C8A | 0.044 (2) | 0.032 (2) | 0.035 (2) | 0.0074 (17) | 0.0016 (18) | 0.0007 (19) |
C8AA | 0.036 (2) | 0.031 (2) | 0.030 (2) | 0.0026 (17) | 0.0033 (17) | −0.0059 (18) |
C9A | 0.046 (2) | 0.044 (3) | 0.030 (2) | 0.008 (2) | 0.0004 (18) | 0.002 (2) |
C10A | 0.034 (2) | 0.041 (3) | 0.034 (2) | −0.0009 (18) | −0.0027 (17) | −0.001 (2) |
C11A | 0.040 (2) | 0.044 (3) | 0.039 (2) | −0.001 (2) | −0.0028 (19) | 0.005 (2) |
C12A | 0.061 (3) | 0.040 (3) | 0.051 (3) | 0.002 (2) | 0.018 (2) | 0.005 (2) |
C13A | 0.054 (3) | 0.055 (3) | 0.049 (3) | 0.005 (2) | 0.012 (2) | −0.001 (2) |
C14A | 0.042 (3) | 0.068 (4) | 0.070 (3) | 0.012 (2) | 0.007 (2) | 0.003 (3) |
Cl1B | 0.0405 (6) | 0.0650 (8) | 0.0541 (7) | −0.0059 (5) | −0.0014 (5) | 0.0164 (6) |
O2B | 0.0549 (19) | 0.073 (2) | 0.054 (2) | −0.0245 (17) | −0.0208 (15) | 0.0135 (17) |
O3B | 0.0509 (16) | 0.0488 (19) | 0.0415 (18) | −0.0135 (14) | −0.0137 (13) | 0.0082 (15) |
N1B | 0.045 (2) | 0.043 (2) | 0.029 (2) | 0.0009 (15) | −0.0112 (14) | 0.0047 (18) |
F1B | 0.0537 (14) | 0.0714 (17) | 0.0350 (12) | −0.0047 (12) | −0.0044 (11) | −0.0097 (13) |
F2B | 0.0564 (15) | 0.088 (2) | 0.0389 (15) | −0.0101 (13) | 0.0021 (11) | 0.0188 (14) |
F3B | 0.0457 (13) | 0.0757 (18) | 0.0402 (14) | 0.0112 (13) | −0.0009 (11) | 0.0075 (13) |
C2B | 0.048 (3) | 0.052 (3) | 0.034 (2) | −0.006 (2) | −0.016 (2) | 0.004 (2) |
C4B | 0.039 (2) | 0.040 (2) | 0.037 (2) | −0.0039 (19) | −0.0116 (18) | 0.002 (2) |
C4BA | 0.038 (2) | 0.031 (2) | 0.031 (2) | 0.0003 (18) | 0.0004 (17) | −0.0039 (18) |
C5B | 0.037 (2) | 0.039 (3) | 0.032 (2) | 0.0036 (17) | −0.0053 (17) | 0.006 (2) |
C6B | 0.034 (2) | 0.041 (2) | 0.037 (2) | 0.0032 (18) | −0.0011 (17) | 0.003 (2) |
C7B | 0.048 (2) | 0.032 (2) | 0.032 (2) | 0.0035 (19) | 0.0070 (17) | 0.0009 (19) |
C8B | 0.046 (2) | 0.034 (2) | 0.026 (2) | 0.0097 (18) | 0.0012 (17) | 0.0017 (18) |
C8BA | 0.032 (2) | 0.038 (2) | 0.033 (2) | 0.0078 (17) | −0.0056 (17) | −0.0085 (19) |
C9B | 0.045 (3) | 0.062 (3) | 0.025 (2) | −0.006 (2) | −0.0056 (19) | 0.010 (2) |
C10B | 0.052 (3) | 0.046 (3) | 0.040 (3) | −0.012 (2) | −0.010 (2) | 0.011 (2) |
C11B | 0.066 (3) | 0.049 (3) | 0.064 (3) | −0.012 (2) | −0.022 (3) | 0.016 (3) |
C12B | 0.094 (4) | 0.044 (3) | 0.096 (4) | 0.002 (3) | −0.042 (3) | 0.022 (3) |
C13B | 0.129 (6) | 0.061 (4) | 0.169 (8) | 0.032 (4) | −0.099 (6) | −0.027 (5) |
C14B | 0.071 (8) | 0.197 (17) | 0.136 (13) | 0.054 (9) | 0.004 (8) | 0.086 (13) |
C14C | 0.169 (15) | 0.24 (2) | 0.081 (10) | 0.143 (16) | 0.016 (9) | 0.061 (12) |
Cl1A—C6A | 1.736 (4) | N1B—C2B | 1.344 (5) |
O2A—C2A | 1.227 (4) | N1B—C8BA | 1.404 (5) |
O3A—C2A | 1.356 (4) | N1B—H1C | 0.89 (4) |
O3A—C4A | 1.464 (4) | F1B—C9B | 1.341 (4) |
N1A—C2A | 1.337 (5) | F2B—C9B | 1.323 (4) |
N1A—C8AA | 1.409 (5) | F3B—C9B | 1.346 (4) |
N1A—H1A | 0.85 (4) | C4B—C10B | 1.465 (5) |
F1A—C9A | 1.336 (4) | C4B—C4BA | 1.514 (5) |
F2A—C9A | 1.336 (4) | C4B—C9B | 1.529 (6) |
F3A—C9A | 1.333 (4) | C4BA—C8BA | 1.383 (5) |
C4A—C10A | 1.470 (6) | C4BA—C5B | 1.400 (5) |
C4A—C4AA | 1.518 (5) | C5B—C6B | 1.379 (5) |
C4A—C9A | 1.531 (5) | C5B—H5C | 0.9500 |
C4AA—C5A | 1.375 (5) | C6B—C7B | 1.381 (5) |
C4AA—C8AA | 1.390 (5) | C7B—C8B | 1.381 (5) |
C5A—C6A | 1.377 (5) | C7B—H7C | 0.9500 |
C5A—H5A | 0.9500 | C8B—C8BA | 1.381 (5) |
C6A—C7A | 1.382 (5) | C8B—H8C | 0.9500 |
C7A—C8A | 1.391 (5) | C10B—C11B | 1.181 (5) |
C7A—H7A | 0.9500 | C11B—C12B | 1.461 (6) |
C8A—C8AA | 1.384 (5) | C12B—C13B | 1.425 (7) |
C8A—H8A | 0.9500 | C12B—C14B | 1.484 (11) |
C10A—C11A | 1.186 (5) | C12B—C14C | 1.632 (12) |
C11A—C12A | 1.448 (6) | C12B—H12C | 1.0000 |
C12A—C14A | 1.492 (5) | C12B—H12E | 1.0000 |
C12A—C13A | 1.497 (5) | C13B—C14C | 1.485 (14) |
C12A—H12A | 1.0000 | C13B—C14B | 1.536 (13) |
C13A—C14A | 1.475 (6) | C13B—H13C | 0.9900 |
C13A—H13A | 0.9900 | C13B—H13D | 0.9900 |
C13A—H13B | 0.9900 | C13B—H13E | 0.9900 |
C14A—H14A | 0.9900 | C13B—H13F | 0.9900 |
C14A—H14B | 0.9900 | C14B—H14C | 0.9900 |
Cl1B—C6B | 1.734 (4) | C14B—H14D | 0.9900 |
O2B—C2B | 1.202 (5) | C14C—H14E | 0.9900 |
O3B—C2B | 1.368 (4) | C14C—H14F | 0.9900 |
O3B—C4B | 1.450 (4) | ||
C2A—O3A—C4A | 117.4 (3) | C5B—C4BA—C4B | 122.2 (3) |
C2A—N1A—C8AA | 123.3 (3) | C6B—C5B—C4BA | 119.7 (3) |
C2A—N1A—H1A | 121 (3) | C6B—C5B—H5C | 120.1 |
C8AA—N1A—H1A | 113 (3) | C4BA—C5B—H5C | 120.1 |
O2A—C2A—N1A | 124.9 (4) | C5B—C6B—C7B | 120.9 (3) |
O2A—C2A—O3A | 117.6 (3) | C5B—C6B—Cl1B | 119.1 (3) |
N1A—C2A—O3A | 117.5 (3) | C7B—C6B—Cl1B | 120.0 (3) |
O3A—C4A—C10A | 109.6 (3) | C8B—C7B—C6B | 119.5 (4) |
O3A—C4A—C4AA | 110.4 (3) | C8B—C7B—H7C | 120.2 |
C10A—C4A—C4AA | 110.0 (3) | C6B—C7B—H7C | 120.2 |
O3A—C4A—C9A | 100.9 (3) | C7B—C8B—C8BA | 119.9 (3) |
C10A—C4A—C9A | 111.1 (3) | C7B—C8B—H8C | 120.1 |
C4AA—C4A—C9A | 114.4 (3) | C8BA—C8B—H8C | 120.1 |
C5A—C4AA—C8AA | 120.1 (3) | C8B—C8BA—C4BA | 121.1 (3) |
C5A—C4AA—C4A | 124.6 (3) | C8B—C8BA—N1B | 121.1 (3) |
C8AA—C4AA—C4A | 115.1 (3) | C4BA—C8BA—N1B | 117.8 (3) |
C4AA—C5A—C6A | 119.3 (3) | F2B—C9B—F1B | 108.3 (3) |
C4AA—C5A—H5A | 120.3 | F2B—C9B—F3B | 107.5 (3) |
C6A—C5A—H5A | 120.3 | F1B—C9B—F3B | 106.6 (4) |
C5A—C6A—C7A | 121.7 (4) | F2B—C9B—C4B | 112.0 (4) |
C5A—C6A—Cl1A | 118.2 (3) | F1B—C9B—C4B | 111.4 (3) |
C7A—C6A—Cl1A | 120.1 (3) | F3B—C9B—C4B | 110.8 (3) |
C6A—C7A—C8A | 118.7 (4) | C11B—C10B—C4B | 174.7 (4) |
C6A—C7A—H7A | 120.6 | C10B—C11B—C12B | 178.3 (6) |
C8A—C7A—H7A | 120.6 | C13B—C12B—C11B | 120.4 (5) |
C8AA—C8A—C7A | 120.0 (4) | C13B—C12B—C14B | 63.7 (6) |
C8AA—C8A—H8A | 120.0 | C11B—C12B—C14B | 113.4 (6) |
C7A—C8A—H8A | 120.0 | C13B—C12B—C14C | 57.7 (6) |
C8A—C8AA—C4AA | 120.1 (4) | C11B—C12B—C14C | 110.5 (7) |
C8A—C8AA—N1A | 121.2 (3) | C14B—C12B—C14C | 118.6 (8) |
C4AA—C8AA—N1A | 118.7 (3) | C13B—C12B—H12C | 116.2 |
F3A—C9A—F1A | 107.0 (3) | C11B—C12B—H12C | 116.2 |
F3A—C9A—F2A | 107.4 (3) | C14B—C12B—H12C | 116.2 |
F1A—C9A—F2A | 107.3 (3) | C14C—C12B—H12C | 77.3 |
F3A—C9A—C4A | 112.0 (3) | C13B—C12B—H12E | 117.8 |
F1A—C9A—C4A | 111.7 (3) | C11B—C12B—H12E | 117.8 |
F2A—C9A—C4A | 111.2 (3) | C14B—C12B—H12E | 74.9 |
C11A—C10A—C4A | 173.0 (4) | C14C—C12B—H12E | 117.8 |
C10A—C11A—C12A | 179.7 (5) | H12C—C12B—H12E | 47.7 |
C11A—C12A—C14A | 119.2 (4) | C12B—C13B—C14C | 68.2 (6) |
C11A—C12A—C13A | 119.8 (4) | C12B—C13B—C14B | 60.0 (5) |
C14A—C12A—C13A | 59.2 (3) | C14C—C13B—C14B | 125.0 (9) |
C11A—C12A—H12A | 115.7 | C12B—C13B—H13C | 117.8 |
C14A—C12A—H12A | 115.7 | C14C—C13B—H13C | 71.3 |
C13A—C12A—H12A | 115.7 | C14B—C13B—H13C | 117.8 |
C14A—C13A—C12A | 60.3 (3) | C12B—C13B—H13D | 117.8 |
C14A—C13A—H13A | 117.7 | C14C—C13B—H13D | 101.3 |
C12A—C13A—H13A | 117.7 | C14B—C13B—H13D | 117.8 |
C14A—C13A—H13B | 117.7 | H13C—C13B—H13D | 114.9 |
C12A—C13A—H13B | 117.7 | C12B—C13B—H13E | 116.9 |
H13A—C13A—H13B | 114.9 | C14C—C13B—H13E | 116.9 |
C13A—C14A—C12A | 60.6 (3) | C14B—C13B—H13E | 102.4 |
C13A—C14A—H14A | 117.7 | H13C—C13B—H13E | 123.0 |
C12A—C14A—H14A | 117.7 | C12B—C13B—H13F | 116.9 |
C13A—C14A—H14B | 117.7 | C14C—C13B—H13F | 116.9 |
C12A—C14A—H14B | 117.7 | C14B—C13B—H13F | 74.7 |
H14A—C14A—H14B | 114.8 | H13C—C13B—H13F | 50.2 |
C2B—O3B—C4B | 121.4 (3) | H13D—C13B—H13F | 121.6 |
C2B—N1B—C8BA | 124.8 (4) | H13E—C13B—H13F | 113.9 |
C2B—N1B—H1C | 121 (3) | C12B—C14B—C13B | 56.3 (5) |
C8BA—N1B—H1C | 114 (3) | C12B—C14B—H14C | 118.1 |
O2B—C2B—N1B | 126.0 (4) | C13B—C14B—H14C | 118.1 |
O2B—C2B—O3B | 117.3 (4) | C12B—C14B—H14D | 118.1 |
N1B—C2B—O3B | 116.7 (4) | C13B—C14B—H14D | 118.1 |
O3B—C4B—C10B | 107.3 (3) | H14C—C14B—H14D | 115.3 |
O3B—C4B—C4BA | 111.2 (3) | C13B—C14C—C12B | 54.2 (5) |
C10B—C4B—C4BA | 112.6 (3) | C13B—C14C—H14E | 118.3 |
O3B—C4B—C9B | 105.5 (3) | C12B—C14C—H14E | 118.3 |
C10B—C4B—C9B | 109.0 (3) | C13B—C14C—H14F | 118.3 |
C4BA—C4B—C9B | 111.0 (3) | C12B—C14C—H14F | 118.3 |
C8BA—C4BA—C5B | 118.8 (3) | H14E—C14C—H14F | 115.6 |
C8BA—C4BA—C4B | 119.0 (3) | ||
C8AA—N1A—C2A—O2A | 171.5 (4) | C2B—O3B—C4B—C4BA | −35.7 (5) |
C8AA—N1A—C2A—O3A | −6.4 (5) | C2B—O3B—C4B—C9B | 84.6 (4) |
C4A—O3A—C2A—O2A | 153.8 (3) | O3B—C4B—C4BA—C8BA | 23.4 (5) |
C4A—O3A—C2A—N1A | −28.2 (5) | C10B—C4B—C4BA—C8BA | 143.8 (3) |
C2A—O3A—C4A—C10A | −73.1 (4) | C9B—C4B—C4BA—C8BA | −93.6 (4) |
C2A—O3A—C4A—C4AA | 48.2 (4) | O3B—C4B—C4BA—C5B | −156.0 (3) |
C2A—O3A—C4A—C9A | 169.6 (3) | C10B—C4B—C4BA—C5B | −35.6 (5) |
O3A—C4A—C4AA—C5A | 149.0 (3) | C9B—C4B—C4BA—C5B | 86.9 (4) |
C10A—C4A—C4AA—C5A | −89.9 (4) | C8BA—C4BA—C5B—C6B | 2.6 (5) |
C9A—C4A—C4AA—C5A | 36.0 (5) | C4B—C4BA—C5B—C6B | −177.9 (3) |
O3A—C4A—C4AA—C8AA | −35.3 (4) | C4BA—C5B—C6B—C7B | −1.9 (6) |
C10A—C4A—C4AA—C8AA | 85.8 (4) | C4BA—C5B—C6B—Cl1B | 178.7 (3) |
C9A—C4A—C4AA—C8AA | −148.3 (3) | C5B—C6B—C7B—C8B | −0.6 (6) |
C8AA—C4AA—C5A—C6A | −1.3 (5) | Cl1B—C6B—C7B—C8B | 178.8 (3) |
C4A—C4AA—C5A—C6A | 174.1 (3) | C6B—C7B—C8B—C8BA | 2.3 (5) |
C4AA—C5A—C6A—C7A | −1.1 (6) | C7B—C8B—C8BA—C4BA | −1.6 (5) |
C4AA—C5A—C6A—Cl1A | −179.4 (3) | C7B—C8B—C8BA—N1B | 179.4 (3) |
C5A—C6A—C7A—C8A | 2.8 (6) | C5B—C4BA—C8BA—C8B | −0.8 (5) |
Cl1A—C6A—C7A—C8A | −179.0 (3) | C4B—C4BA—C8BA—C8B | 179.7 (3) |
C6A—C7A—C8A—C8AA | −2.1 (5) | C5B—C4BA—C8BA—N1B | 178.2 (3) |
C7A—C8A—C8AA—C4AA | −0.3 (6) | C4B—C4BA—C8BA—N1B | −1.3 (5) |
C7A—C8A—C8AA—N1A | −179.4 (3) | C2B—N1B—C8BA—C8B | 165.5 (4) |
C5A—C4AA—C8AA—C8A | 2.0 (5) | C2B—N1B—C8BA—C4BA | −13.5 (5) |
C4A—C4AA—C8AA—C8A | −173.8 (3) | O3B—C4B—C9B—F2B | 55.3 (4) |
C5A—C4AA—C8AA—N1A | −178.9 (3) | C10B—C4B—C9B—F2B | −59.6 (4) |
C4A—C4AA—C8AA—N1A | 5.3 (5) | C4BA—C4B—C9B—F2B | 175.8 (3) |
C2A—N1A—C8AA—C8A | −163.0 (4) | O3B—C4B—C9B—F1B | 176.8 (3) |
C2A—N1A—C8AA—C4AA | 17.9 (5) | C10B—C4B—C9B—F1B | 61.9 (4) |
O3A—C4A—C9A—F3A | −66.2 (4) | C4BA—C4B—C9B—F1B | −62.7 (4) |
C10A—C4A—C9A—F3A | 177.7 (3) | O3B—C4B—C9B—F3B | −64.7 (4) |
C4AA—C4A—C9A—F3A | 52.4 (4) | C10B—C4B—C9B—F3B | −179.6 (3) |
O3A—C4A—C9A—F1A | 53.8 (4) | C4BA—C4B—C9B—F3B | 55.8 (4) |
C10A—C4A—C9A—F1A | −62.3 (4) | O3B—C4B—C10B—C11B | 159 (5) |
C4AA—C4A—C9A—F1A | 172.4 (3) | C4BA—C4B—C10B—C11B | 36 (5) |
O3A—C4A—C9A—F2A | 173.6 (3) | C9B—C4B—C10B—C11B | −88 (5) |
C10A—C4A—C9A—F2A | 57.5 (4) | C4B—C10B—C11B—C12B | −107 (17) |
C4AA—C4A—C9A—F2A | −67.8 (4) | C10B—C11B—C12B—C13B | 140 (18) |
O3A—C4A—C10A—C11A | 65 (4) | C10B—C11B—C12B—C14B | 67 (18) |
C4AA—C4A—C10A—C11A | −57 (4) | C10B—C11B—C12B—C14C | −157 (18) |
C9A—C4A—C10A—C11A | 176 (3) | C11B—C12B—C13B—C14C | 96.3 (9) |
C4A—C10A—C11A—C12A | 147 (100) | C14B—C12B—C13B—C14C | −160.8 (10) |
C10A—C11A—C12A—C14A | 125 (100) | C11B—C12B—C13B—C14B | −103.0 (8) |
C10A—C11A—C12A—C13A | 56 (97) | C14C—C12B—C13B—C14B | 160.8 (10) |
C11A—C12A—C13A—C14A | 108.2 (5) | C11B—C12B—C14B—C13B | 113.6 (6) |
C11A—C12A—C14A—C13A | −109.2 (4) | C14C—C12B—C14B—C13B | −18.5 (10) |
C8BA—N1B—C2B—O2B | −174.4 (4) | C14C—C13B—C14B—C12B | 21.9 (10) |
C8BA—N1B—C2B—O3B | 2.6 (6) | C14B—C13B—C14C—C12B | −20.4 (9) |
C4B—O3B—C2B—O2B | −158.9 (4) | C11B—C12B—C14C—C13B | −113.7 (6) |
C4B—O3B—C2B—N1B | 23.9 (5) | C14B—C12B—C14C—C13B | 19.7 (10) |
C2B—O3B—C4B—C10B | −159.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1A—H1A···O2B | 0.85 (4) | 2.00 (4) | 2.834 (4) | 167 (4) |
N1B—H1C···O2A | 0.89 (4) | 1.94 (4) | 2.820 (4) | 168 (4) |
Experimental details
Crystal data | |
Chemical formula | C14H9ClF3NO2 |
Mr | 315.67 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 120 |
a, b, c (Å) | 8.1403 (4), 13.5859 (11), 24.962 (2) |
V (Å3) | 2760.6 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.31 |
Crystal size (mm) | 0.28 × 0.08 × 0.04 |
Data collection | |
Diffractometer | Bruker–Nonius 95mm CCD camera on κ-goniostat diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.917, 0.988 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18370, 6099, 3675 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.127, 1.03 |
No. of reflections | 6099 |
No. of parameters | 395 |
No. of restraints | 5 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.25 |
Absolute structure | Flack (1983), 2598 Friedel pairs |
Absolute structure parameter | 0.14 (8) |
Computer programs: , DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1A—H1A···O2B | 0.85 (4) | 2.00 (4) | 2.834 (4) | 167 (4) |
N1B—H1C···O2A | 0.89 (4) | 1.94 (4) | 2.820 (4) | 168 (4) |
Footnotes
‡Additional correspondence author, e-mail: j.wardell@abdn.ac.uk.
Acknowledgements
The use of the EPSRC X-ray crystallographic service at the University of Southampton, England and the valuable assistance of the staff there is gratefully acknowledged. JLW acknowledges support from CAPES (Brazil).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title anti-retroviral agent, Efavirenz, is a second-generation non-nucleoside inhibitor of HIV-1 reverse transcriptase (RT) that has been approved for use against HIV-1 infection. It is also called Sustiva or Stocrin and is manufactured by Bristol-Myers Squibb. Compared with first-generation drugs such as nevirapine, Efavirenz shows greater resilience to drug resistance mutations within HIV-1 RT. Effective treatment through inhibition of HIV reverse transcriptase has been shown for both nucleoside based inhibitors, such as azidothymidine, and non-nucleoside based inhibitors, such as Efavirenz. Efavirenz is also used in combination with other anti-retroviral agents as part of an expanded post-exposure prophylaxis regimen to reduce the risk of HIV infection in people exposed to a significant risk (Adkins & Noble, 1998; Gazzard, 1999; de Clercq et al., 2009; Markowitz et al., 2009; Young et al., 2009).
Two independent molecules comprise the asymmetric unit in (I), labelled a and b, Fig. 1. There are significant differences in conformation between the molecules and these relate primarily to the disposition of the 2-cyclopropylethynyl residue to the six-membered hetero-ring. As seen from Fig. 1, each hetero ring adopts a flattened half-chain conformation with the C4a and C4b atoms being the pivotal atoms. In molecule a, the C4a atom is orientated towards the same side of the six-membered ring as the 2-cyclopropylethynyl residue which occupies a position orthogonal to the six-membered ring as seen in the O3a/C4a/C10a/C11a torsion angle of 65 (4) °. In molecule b, the C4b atom and 2-cyclopropylethynyl residue lie to opposite sides of the six-membered ring and the comparable torsion angle is 159 (5) °. The independent molecules associate via the eight-membered {···HNC(O)}2 amide synthon, Table 1 and Fig. 1.