organic compounds
5-Acetyl-4-(4-methoxyphenyl)-6-methyl-3,4-dihydropyrimidine-2(1H)-thione
aPG Research Department of Physics, Rajah Serfoji Government College (Autonomous), Thanjavur 613 005, Tamil Nadu, India, bDepartment of Chemistry, Annamalai University, Annamalai Nagar 608 002, Tamil Nadu, India, and cDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA
*Correspondence e-mail: athiru@vsnl.net
In the title molecule, C14H16N2O2S, the heterocyclic ring adopts an with the plane through the five coplanar atoms making a dihedral angle of 88.99 (4)° with the benzene ring, which adopts an axial orientation. The thionyl, acetyl and methyl groups all have equatorial orientations. Intermolecular N—H⋯S, N—H⋯O, C—H⋯O and C—H⋯S hydrogen bonds are found in the crystal structure.
Related literature
For related crystal structures and their chemical and biological applications, see: Anuradha et al. (2008, 2009); Chitra et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis Pro (Oxford Diffraction, 2009); cell CrysAlis Pro; data reduction: CrysAlis Pro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).
Supporting information
10.1107/S160053680904639X/wn2363sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680904639X/wn2363Isup2.hkl
A solution of acetylacetone (1.001 g, 0.01 mol), 4-methoxybenzaldehyde (1.202 g, 0.01 mol) and thiourea (1.14 g, 0.015 mol) was heated under reflux in the presence of calcium fluoride (0.078 g, 0.001 mol) for 3 h (monitored by TLC). After completion of the reaction, the reaction mixture was cooled to room temperature and poured into crushed ice. The crude product containing also the catalyst was collected by filtration on a Buchner funnel. The mixture of the product and the catalyst was digested in methanol (40 ml). The undissolved catalyst was removed by filtration. The crude product was obtained by evaporation of the methanol and further purified by recrystallization from hot ethanol to afford the pure title compound. Yield 90% (1.2 g).
The two N-bound H atoms were located in a difference Fourier map and refined freely; N1—H1 = 0.87 (2) Å and N3—H3 = 0.85 (2) Å. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.95 - 1.00 Å ; Uiso(H) = kUeq(C), where k = 1.5 for methyl and 1.2 for all other H atoms.
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing the atom-numbering scheme and displacement ellipsoids drawn at the 40% probability level. H atoms are shown as small spheres of arbitrary radius. | |
Fig. 2. The packing of the title compound, viewed down the b axis. Dashed lines indicate hydrogen bonds. H atoms not involved in hydrogen bonding have been omitted. |
C14H16N2O2S | F(000) = 584 |
Mr = 276.36 | Dx = 1.385 Mg m−3 |
Monoclinic, P21/n | Melting point: 469.5 K |
Hall symbol: -P 2yn | Cu Kα radiation, λ = 1.54184 Å |
a = 12.0415 (2) Å | Cell parameters from 4545 reflections |
b = 6.2219 (1) Å | θ = 4.9–74.1° |
c = 18.0192 (3) Å | µ = 2.17 mm−1 |
β = 100.901 (1)° | T = 110 K |
V = 1325.66 (4) Å3 | Needle, colorless |
Z = 4 | 0.53 × 0.13 × 0.10 mm |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2616 independent reflections |
Radiation source: fine-focus sealed tube | 2447 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 74.1°, θmin = 4.9° |
ω scans | h = −12→15 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −7→7 |
Tmin = 0.418, Tmax = 1.000 | l = −21→22 |
5263 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0764P)2 + 0.4468P] where P = (Fo2 + 2Fc2)/3 |
2616 reflections | (Δ/σ)max = 0.001 |
183 parameters | Δρmax = 0.44 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C14H16N2O2S | V = 1325.66 (4) Å3 |
Mr = 276.36 | Z = 4 |
Monoclinic, P21/n | Cu Kα radiation |
a = 12.0415 (2) Å | µ = 2.17 mm−1 |
b = 6.2219 (1) Å | T = 110 K |
c = 18.0192 (3) Å | 0.53 × 0.13 × 0.10 mm |
β = 100.901 (1)° |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2616 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 2447 reflections with I > 2σ(I) |
Tmin = 0.418, Tmax = 1.000 | Rint = 0.020 |
5263 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.44 e Å−3 |
2616 reflections | Δρmin = −0.28 e Å−3 |
183 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S2 | 0.88945 (3) | 0.40406 (6) | 0.57843 (2) | 0.0167 (1) | |
O14 | 0.29443 (9) | 0.06284 (18) | 0.34383 (6) | 0.0192 (3) | |
O15 | 0.74168 (10) | −0.43229 (18) | 0.35876 (6) | 0.0240 (3) | |
N1 | 0.90803 (10) | 0.2225 (2) | 0.44765 (7) | 0.0155 (3) | |
N3 | 0.80719 (10) | 0.0321 (2) | 0.52096 (7) | 0.0151 (3) | |
C2 | 0.86586 (11) | 0.2080 (2) | 0.51219 (8) | 0.0139 (4) | |
C4 | 0.75819 (12) | −0.1161 (2) | 0.45957 (8) | 0.0140 (4) | |
C5 | 0.82669 (12) | −0.1056 (2) | 0.39675 (8) | 0.0140 (4) | |
C6 | 0.89493 (12) | 0.0647 (2) | 0.39170 (8) | 0.0139 (4) | |
C14 | 0.26371 (13) | 0.2480 (3) | 0.29726 (9) | 0.0237 (4) | |
C15 | 0.80594 (12) | −0.2907 (2) | 0.34489 (8) | 0.0158 (4) | |
C16 | 0.85846 (12) | −0.3124 (2) | 0.27577 (8) | 0.0181 (4) | |
C41 | 0.63430 (12) | −0.0628 (2) | 0.43028 (8) | 0.0148 (4) | |
C42 | 0.60296 (12) | 0.1390 (3) | 0.40073 (8) | 0.0162 (4) | |
C43 | 0.49062 (12) | 0.1883 (2) | 0.37094 (8) | 0.0169 (4) | |
C44 | 0.40836 (12) | 0.0309 (3) | 0.37140 (8) | 0.0159 (4) | |
C45 | 0.43784 (12) | −0.1707 (3) | 0.40213 (8) | 0.0185 (4) | |
C46 | 0.55023 (12) | −0.2172 (2) | 0.43155 (8) | 0.0172 (4) | |
C61 | 0.96218 (13) | 0.1116 (2) | 0.33106 (8) | 0.0178 (4) | |
H1 | 0.9539 (17) | 0.328 (3) | 0.4448 (11) | 0.022 (5)* | |
H3 | 0.7815 (18) | 0.021 (4) | 0.5615 (12) | 0.028 (5)* | |
H4 | 0.76299 | −0.26565 | 0.48025 | 0.0167* | |
H14A | 0.30923 | 0.25272 | 0.25759 | 0.0356* | |
H14B | 0.18337 | 0.23987 | 0.27404 | 0.0356* | |
H14C | 0.27750 | 0.37814 | 0.32827 | 0.0356* | |
H16A | 0.83989 | −0.45371 | 0.25270 | 0.0271* | |
H16B | 0.82891 | −0.19969 | 0.23937 | 0.0271* | |
H16C | 0.94075 | −0.29797 | 0.29024 | 0.0271* | |
H42 | 0.65940 | 0.24570 | 0.40083 | 0.0194* | |
H43 | 0.47036 | 0.32683 | 0.35065 | 0.0202* | |
H45 | 0.38117 | −0.27642 | 0.40300 | 0.0222* | |
H46 | 0.57023 | −0.35485 | 0.45271 | 0.0206* | |
H61A | 0.91214 | 0.10624 | 0.28142 | 0.0267* | |
H61B | 0.99595 | 0.25503 | 0.33916 | 0.0267* | |
H61C | 1.02218 | 0.00414 | 0.33314 | 0.0267* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S2 | 0.0187 (2) | 0.0159 (2) | 0.0155 (2) | −0.0015 (1) | 0.0030 (1) | −0.0042 (1) |
O14 | 0.0145 (5) | 0.0235 (6) | 0.0196 (5) | −0.0007 (4) | 0.0030 (4) | 0.0031 (4) |
O15 | 0.0333 (7) | 0.0176 (6) | 0.0225 (5) | −0.0084 (4) | 0.0087 (5) | −0.0039 (4) |
N1 | 0.0175 (6) | 0.0134 (6) | 0.0161 (6) | −0.0030 (5) | 0.0042 (5) | −0.0007 (5) |
N3 | 0.0162 (6) | 0.0175 (6) | 0.0118 (5) | −0.0020 (5) | 0.0034 (5) | −0.0011 (5) |
C2 | 0.0127 (6) | 0.0139 (7) | 0.0140 (6) | 0.0025 (5) | −0.0003 (5) | −0.0006 (5) |
C4 | 0.0164 (7) | 0.0112 (6) | 0.0139 (6) | −0.0026 (5) | 0.0020 (5) | −0.0002 (5) |
C5 | 0.0152 (7) | 0.0135 (7) | 0.0128 (6) | 0.0016 (5) | 0.0014 (5) | −0.0003 (5) |
C6 | 0.0136 (7) | 0.0140 (7) | 0.0135 (6) | 0.0014 (5) | 0.0012 (5) | 0.0007 (5) |
C14 | 0.0191 (7) | 0.0262 (8) | 0.0253 (8) | 0.0031 (6) | 0.0028 (6) | 0.0052 (7) |
C15 | 0.0184 (7) | 0.0129 (7) | 0.0149 (6) | 0.0013 (5) | −0.0002 (5) | 0.0003 (5) |
C16 | 0.0222 (7) | 0.0162 (7) | 0.0154 (6) | −0.0001 (5) | 0.0025 (5) | −0.0029 (5) |
C41 | 0.0168 (7) | 0.0167 (7) | 0.0110 (6) | −0.0015 (5) | 0.0030 (5) | −0.0012 (5) |
C42 | 0.0173 (7) | 0.0166 (7) | 0.0151 (6) | −0.0042 (5) | 0.0042 (5) | 0.0004 (6) |
C43 | 0.0193 (7) | 0.0161 (7) | 0.0159 (6) | 0.0000 (5) | 0.0048 (5) | 0.0016 (5) |
C44 | 0.0147 (7) | 0.0205 (7) | 0.0128 (6) | −0.0008 (5) | 0.0032 (5) | −0.0014 (5) |
C45 | 0.0176 (7) | 0.0186 (8) | 0.0200 (7) | −0.0056 (6) | 0.0051 (5) | −0.0008 (6) |
C46 | 0.0198 (7) | 0.0143 (7) | 0.0178 (7) | −0.0021 (5) | 0.0046 (5) | 0.0001 (5) |
C61 | 0.0204 (7) | 0.0170 (7) | 0.0172 (7) | −0.0037 (5) | 0.0067 (6) | −0.0014 (5) |
S2—C2 | 1.6927 (14) | C42—C43 | 1.392 (2) |
O14—C14 | 1.432 (2) | C43—C44 | 1.394 (2) |
O14—C44 | 1.3822 (18) | C44—C45 | 1.390 (3) |
O15—C15 | 1.2290 (18) | C45—C46 | 1.387 (2) |
N1—C2 | 1.3571 (19) | C4—H4 | 1.0000 |
N1—C6 | 1.3947 (18) | C14—H14A | 0.9800 |
N3—C2 | 1.3282 (18) | C14—H14B | 0.9800 |
N3—C4 | 1.4749 (18) | C14—H14C | 0.9800 |
N1—H1 | 0.87 (2) | C16—H16A | 0.9800 |
N3—H3 | 0.85 (2) | C16—H16B | 0.9800 |
C4—C41 | 1.522 (2) | C16—H16C | 0.9800 |
C4—C5 | 1.523 (2) | C42—H42 | 0.9500 |
C5—C6 | 1.3544 (19) | C43—H43 | 0.9500 |
C5—C15 | 1.4744 (19) | C45—H45 | 0.9500 |
C6—C61 | 1.507 (2) | C46—H46 | 0.9500 |
C15—C16 | 1.506 (2) | C61—H61A | 0.9800 |
C41—C46 | 1.3989 (19) | C61—H61B | 0.9800 |
C41—C42 | 1.388 (2) | C61—H61C | 0.9800 |
S2···N1i | 3.4641 (13) | C43···H14C | 2.8000 |
S2···C16ii | 3.6641 (15) | C43···H14A | 2.7200 |
S2···H4iii | 2.9400 | C44···H3vi | 2.80 (2) |
S2···H1i | 2.61 (2) | C45···H3vi | 2.99 (2) |
S2···H14Civ | 3.1600 | C61···H16B | 2.8400 |
S2···H16Cii | 2.9000 | C61···H16C | 2.6500 |
S2···H61Bi | 2.8000 | H1···H61B | 2.1100 |
S2···H61Cii | 3.0800 | H1···S2i | 2.61 (2) |
O14···C14v | 3.181 (2) | H3···O14vi | 2.15 (2) |
O14···N3vi | 2.9849 (16) | H3···C44vi | 2.80 (2) |
O15···N1vii | 3.1588 (17) | H3···C45vi | 2.99 (2) |
O15···C42vii | 3.310 (2) | H4···S2vii | 2.9400 |
O15···C46 | 3.1575 (18) | H4···O15 | 2.3900 |
O15···C41 | 3.0411 (18) | H4···H46 | 2.3500 |
O14···H3vi | 2.15 (2) | H14A···C43 | 2.7200 |
O14···H14Av | 2.7900 | H14A···H43 | 2.3600 |
O15···H4 | 2.3900 | H14A···O14ix | 2.7900 |
O15···H42vii | 2.4200 | H14C···C43 | 2.8000 |
O15···H16Bviii | 2.4600 | H14C···H43 | 2.3000 |
O15···H61Aviii | 2.8500 | H14C···S2iv | 3.1600 |
N1···O15iii | 3.1588 (17) | H16A···C15viii | 3.0700 |
N1···S2i | 3.4641 (13) | H16A···C42viii | 3.0300 |
N3···O14vi | 2.9849 (16) | H16A···H16Bviii | 2.5700 |
N3···H42 | 2.8600 | H16B···C61 | 2.8400 |
C2···C42 | 3.440 (2) | H16B···H61A | 2.2200 |
C2···C6ii | 3.5055 (19) | H16B···O15x | 2.4600 |
C6···C42 | 3.580 (2) | H16B···C42viii | 2.9700 |
C6···C2ii | 3.5055 (19) | H16B···H16Ax | 2.5700 |
C14···C14v | 3.532 (3) | H16B···H42viii | 2.5800 |
C14···C14ix | 3.532 (3) | H16C···C6 | 3.0200 |
C14···O14ix | 3.181 (2) | H16C···C61 | 2.6500 |
C16···C43viii | 3.480 (2) | H16C···H61A | 2.5400 |
C16···S2ii | 3.6641 (15) | H16C···H61C | 2.1900 |
C16···C61 | 3.0069 (18) | H16C···S2ii | 2.9000 |
C16···C42viii | 3.314 (2) | H42···O15iii | 2.4200 |
C41···O15 | 3.0411 (18) | H42···N3 | 2.8600 |
C42···C6 | 3.580 (2) | H42···C2 | 2.8900 |
C42···O15iii | 3.310 (2) | H42···C5 | 2.9800 |
C42···C16x | 3.314 (2) | H42···C6 | 3.0800 |
C42···C2 | 3.440 (2) | H42···H16Bx | 2.5800 |
C43···C16x | 3.480 (2) | H43···C14 | 2.5400 |
C46···O15 | 3.1575 (18) | H43···H14A | 2.3600 |
C61···C16 | 3.0069 (18) | H43···H14C | 2.3000 |
C2···H42 | 2.8900 | H46···H4 | 2.3500 |
C5···H42 | 2.9800 | H61A···C15 | 3.1000 |
C6···H16C | 3.0200 | H61A···C16 | 2.6800 |
C6···H42 | 3.0800 | H61A···H16B | 2.2200 |
C14···H43 | 2.5400 | H61A···H16C | 2.5400 |
C15···H16Ax | 3.0700 | H61A···O15x | 2.8500 |
C15···H61A | 3.1000 | H61B···H1 | 2.1100 |
C16···H61C | 2.8400 | H61B···S2i | 2.8000 |
C16···H61A | 2.6800 | H61C···C16 | 2.8400 |
C42···H16Bx | 2.9700 | H61C···H16C | 2.1900 |
C42···H16Ax | 3.0300 | H61C···S2ii | 3.0800 |
C14—O14—C44 | 117.07 (12) | C41—C46—C45 | 120.48 (13) |
C2—N1—C6 | 124.27 (12) | N3—C4—H4 | 108.00 |
C2—N3—C4 | 124.91 (12) | C5—C4—H4 | 108.00 |
C2—N1—H1 | 116.6 (13) | C41—C4—H4 | 108.00 |
C6—N1—H1 | 118.5 (13) | O14—C14—H14A | 109.00 |
C2—N3—H3 | 117.3 (16) | O14—C14—H14B | 109.00 |
C4—N3—H3 | 115.8 (16) | O14—C14—H14C | 109.00 |
S2—C2—N3 | 122.14 (11) | H14A—C14—H14B | 109.00 |
N1—C2—N3 | 116.77 (12) | H14A—C14—H14C | 109.00 |
S2—C2—N1 | 121.08 (10) | H14B—C14—H14C | 109.00 |
N3—C4—C5 | 109.55 (11) | C15—C16—H16A | 109.00 |
N3—C4—C41 | 110.53 (11) | C15—C16—H16B | 109.00 |
C5—C4—C41 | 111.47 (12) | C15—C16—H16C | 109.00 |
C4—C5—C15 | 112.76 (11) | H16A—C16—H16B | 109.00 |
C6—C5—C15 | 126.92 (13) | H16A—C16—H16C | 109.00 |
C4—C5—C6 | 120.28 (12) | H16B—C16—H16C | 109.00 |
N1—C6—C5 | 119.29 (13) | C41—C42—H42 | 119.00 |
N1—C6—C61 | 112.65 (11) | C43—C42—H42 | 119.00 |
C5—C6—C61 | 128.06 (12) | C42—C43—H43 | 121.00 |
C5—C15—C16 | 123.16 (12) | C44—C43—H43 | 121.00 |
O15—C15—C5 | 117.96 (13) | C44—C45—H45 | 120.00 |
O15—C15—C16 | 118.88 (12) | C46—C45—H45 | 120.00 |
C4—C41—C46 | 120.64 (11) | C41—C46—H46 | 120.00 |
C42—C41—C46 | 118.84 (13) | C45—C46—H46 | 120.00 |
C4—C41—C42 | 120.51 (12) | C6—C61—H61A | 109.00 |
C41—C42—C43 | 121.41 (14) | C6—C61—H61B | 109.00 |
C42—C43—C44 | 118.86 (14) | C6—C61—H61C | 109.00 |
O14—C44—C43 | 123.70 (15) | H61A—C61—H61B | 109.00 |
C43—C44—C45 | 120.54 (14) | H61A—C61—H61C | 109.00 |
O14—C44—C45 | 115.74 (14) | H61B—C61—H61C | 109.00 |
C44—C45—C46 | 119.84 (14) | ||
C14—O14—C44—C43 | 14.8 (2) | C4—C5—C6—N1 | 4.6 (2) |
C14—O14—C44—C45 | −166.54 (13) | C4—C5—C6—C61 | −175.22 (13) |
C6—N1—C2—S2 | 178.02 (11) | C15—C5—C6—N1 | −177.58 (13) |
C6—N1—C2—N3 | −1.0 (2) | C15—C5—C6—C61 | 2.6 (2) |
C2—N1—C6—C5 | 7.1 (2) | C4—C5—C15—O15 | −2.64 (19) |
C2—N1—C6—C61 | −173.10 (13) | C4—C5—C15—C16 | 176.60 (12) |
C4—N3—C2—S2 | 163.27 (11) | C6—C5—C15—O15 | 179.36 (14) |
C4—N3—C2—N1 | −17.7 (2) | C6—C5—C15—C16 | −1.4 (2) |
C2—N3—C4—C5 | 26.71 (18) | C4—C41—C42—C43 | 177.44 (13) |
C2—N3—C4—C41 | −96.51 (16) | C46—C41—C42—C43 | −1.6 (2) |
N3—C4—C5—C6 | −19.06 (18) | C4—C41—C46—C45 | −177.50 (13) |
N3—C4—C5—C15 | 162.80 (11) | C42—C41—C46—C45 | 1.5 (2) |
C41—C4—C5—C6 | 103.60 (15) | C41—C42—C43—C44 | 0.3 (2) |
C41—C4—C5—C15 | −74.54 (14) | C42—C43—C44—O14 | 179.52 (13) |
N3—C4—C41—C42 | 59.07 (17) | C42—C43—C44—C45 | 1.0 (2) |
N3—C4—C41—C46 | −121.95 (14) | O14—C44—C45—C46 | −179.68 (13) |
C5—C4—C41—C42 | −63.03 (16) | C43—C44—C45—C46 | −1.0 (2) |
C5—C4—C41—C46 | 115.95 (14) | C44—C45—C46—C41 | −0.2 (2) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+2, −y, −z+1; (iii) x, y+1, z; (iv) −x+1, −y+1, −z+1; (v) −x+1/2, y−1/2, −z+1/2; (vi) −x+1, −y, −z+1; (vii) x, y−1, z; (viii) −x+3/2, y−1/2, −z+1/2; (ix) −x+1/2, y+1/2, −z+1/2; (x) −x+3/2, y+1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···S2i | 0.87 (2) | 2.61 (2) | 3.464 (1) | 169.3 (18) |
N3—H3···O14vi | 0.85 (2) | 2.15 (2) | 2.985 (2) | 170 (2) |
C16—H16B···O15x | 0.98 | 2.46 | 3.4377 (17) | 176 |
C42—H42···O15iii | 0.95 | 2.42 | 3.310 (2) | 156 |
C61—H61B···S2i | 0.98 | 2.80 | 3.7190 (14) | 157 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (iii) x, y+1, z; (vi) −x+1, −y, −z+1; (x) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H16N2O2S |
Mr | 276.36 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 110 |
a, b, c (Å) | 12.0415 (2), 6.2219 (1), 18.0192 (3) |
β (°) | 100.901 (1) |
V (Å3) | 1325.66 (4) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 2.17 |
Crystal size (mm) | 0.53 × 0.13 × 0.10 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Ruby Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.418, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5263, 2616, 2447 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.624 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.112, 1.09 |
No. of reflections | 2616 |
No. of parameters | 183 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.44, −0.28 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···S2i | 0.87 (2) | 2.61 (2) | 3.464 (1) | 169.3 (18) |
N3—H3···O14ii | 0.85 (2) | 2.15 (2) | 2.985 (2) | 170 (2) |
C16—H16B···O15iii | 0.98 | 2.46 | 3.4377 (17) | 176 |
C42—H42···O15iv | 0.95 | 2.42 | 3.310 (2) | 156 |
C61—H61B···S2i | 0.98 | 2.80 | 3.7190 (14) | 157 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x+3/2, y+1/2, −z+1/2; (iv) x, y+1, z. |
Acknowledgements
RJB acknowledges the NSF MRI program (grant No. CHE-0619278) for funds to purchase an X-ray diffractometer.
References
Anuradha, N., Thiruvalluvar, A., Pandiarajan, K., Chitra, S. & Butcher, R. J. (2008). Acta Cryst. E64, o2474–o2475. Web of Science CSD CrossRef IUCr Journals Google Scholar
Anuradha, N., Thiruvalluvar, A., Pandiarajan, K., Chitra, S. & Butcher, R. J. (2009). Acta Cryst. E65, o564–o565. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Chitra, S., Pandiarajan, K., Anuradha, N. & Thiruvalluvar, A. (2009). Acta Cryst. E65, o23. Web of Science CSD CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Oxford Diffraction (2009). CrysAlis Pro. Oxford Diffraction Ltd, Yarnton, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As part of our investigations of dihydropyrimidine derivatives to compare their biological activity, we have undertaken the X-ray crystal structure analysis of the title compound. The crystal structures of three very closely related compounds have recently been reported [Anuradha et al., (2008, 2009); Chitra et al., (2009]; these studies have also reported their chemical and biological applications.
In the title molecule, C14H16N2O2S, (Fig. 1), the heterocyclic ring adopts an envelope conformation with the plane through the five coplanar atoms (N1,C2,N3,C5,C6) making a dihedral angle of 88.99 (4)° with the benzene ring, which adopts an axial orientation. The thionyl, acetyl and methyl groups all have equatorial orientations. Intermolecular N1—H1···S2(2 - x, 1 - y, 1 - z), N3—H3···O14(1 - x, -y, 1 - z), C16—H16B···O15(3/2 - x, 1/2 + y, 1/2 - z), C42—H42···O15(x, 1 + y, z) and C61—H61B···S2(2 - x, 1 - y, 1 - z) hydrogen bonds are found in the crystal structure.