metal-organic compounds
Tetraaquabis[3-(4-pyridyl)benzoato-κN]nickel(II)
aSchool of Chemistry & Chemical Engineering, Guangxi Normal University, 541004 Guilin 541004, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The NiII atom in the title compound, [Ni(C12H8NO2)2(H2O)4], exists in an all-trans octahedral coordination environment. The 3-(4-pyridyl)benzoate ligand binds to Ni atom through the pyridyl N atom; the pyridine and benzene rings are oriented at a dihedral angle of 26.27 (10)°. Adjacent complexes are linked by O—H⋯O hydrogen bonds, forming a three-dimensional network. The metal atom lies on a special position of 2 in the crystal structure.
Related literature
The 3-(pyridin-4-yl)benzoate unit is fairly rigid like the nicotinate unit, which also forms a similar zwitterionic nickel derivative; see: Batten & Harris (2001).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
10.1107/S1600536809051204/xu2699sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809051204/xu2699Isup2.hkl
3-(Pyridin-4-yl)benzoic acid was purchased from a chemical supplier. The reagent (0.199 g, 1 mmol) and sodium hydroxide (0.040 g, 1 mmol) were mixed with nickel(II) nitrate hexahydrate (0.150 g, 0.5 mmol) in water (10 ml). The mixture was placed in a 15 ml Teflon-lined autoclave and heated at 423 K for 48 h. The autoclave was cooled over 12 h at a rate of 5 K an hour. Green crystals were isolated by hand (yield ca 60% based on Ni).
Carbon-bound hydrogen atoms were generated geometrically and were constrained to ride on their parent atoms [C–H = 0.95 Å; Uiso(H) =1.2Ueq(C)]. The water H-atoms were located in a difference Fourier map, and were refined with a distance restraint of O–H 0.84±0.01 Å; their temperature factors were refined.
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of Ni(H2O)4(C12H2NO2)2 at the 70% probability level; hydrogen atoms are drawn as sphere of arbitrary radius. |
[Ni(C12H8NO2)2(H2O)4] | F(000) = 1096 |
Mr = 527.16 | Dx = 1.597 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 996 reflections |
a = 24.564 (3) Å | θ = 3.0–26.9° |
b = 7.0520 (8) Å | µ = 0.94 mm−1 |
c = 13.781 (2) Å | T = 173 K |
β = 113.325 (2)° | Prism, green |
V = 2192.1 (4) Å3 | 0.47 × 0.31 × 0.08 mm |
Z = 4 |
Bruker APEXII diffractometer | 2360 independent reflections |
Radiation source: fine-focus sealed tube | 1977 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ϕ and ω scans | θmax = 27.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→31 |
Tmin = 0.666, Tmax = 0.929 | k = −8→8 |
5587 measured reflections | l = −17→10 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0539P)2 + 0.5684P] where P = (Fo2 + 2Fc2)/3 |
2360 reflections | (Δ/σ)max = 0.001 |
175 parameters | Δρmax = 0.38 e Å−3 |
4 restraints | Δρmin = −0.27 e Å−3 |
[Ni(C12H8NO2)2(H2O)4] | V = 2192.1 (4) Å3 |
Mr = 527.16 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 24.564 (3) Å | µ = 0.94 mm−1 |
b = 7.0520 (8) Å | T = 173 K |
c = 13.781 (2) Å | 0.47 × 0.31 × 0.08 mm |
β = 113.325 (2)° |
Bruker APEXII diffractometer | 2360 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1977 reflections with I > 2σ(I) |
Tmin = 0.666, Tmax = 0.929 | Rint = 0.023 |
5587 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 4 restraints |
wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.38 e Å−3 |
2360 reflections | Δρmin = −0.27 e Å−3 |
175 parameters |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.5000 | 0.30069 (5) | 0.7500 | 0.01561 (13) | |
N1 | 0.58142 (7) | 0.3092 (2) | 0.73473 (13) | 0.0179 (3) | |
O1 | 0.90563 (6) | 0.2232 (2) | 0.96391 (12) | 0.0266 (3) | |
O2 | 0.96160 (6) | 0.29413 (19) | 0.87580 (12) | 0.0242 (3) | |
O1W | 0.46891 (6) | 0.0848 (2) | 0.64084 (11) | 0.0199 (3) | |
O2W | 0.53247 (6) | 0.5047 (2) | 0.86819 (11) | 0.0208 (3) | |
C1 | 0.91223 (9) | 0.2740 (3) | 0.88189 (16) | 0.0197 (4) | |
C2 | 0.85662 (8) | 0.3156 (3) | 0.78537 (16) | 0.0172 (4) | |
C3 | 0.85969 (8) | 0.3652 (3) | 0.69003 (17) | 0.0208 (4) | |
H3 | 0.8970 | 0.3732 | 0.6845 | 0.025* | |
C4 | 0.80768 (8) | 0.4029 (3) | 0.60302 (16) | 0.0220 (4) | |
H4 | 0.8096 | 0.4366 | 0.5377 | 0.026* | |
C5 | 0.75295 (8) | 0.3919 (3) | 0.61016 (15) | 0.0205 (4) | |
H5 | 0.7178 | 0.4188 | 0.5500 | 0.025* | |
C6 | 0.74932 (8) | 0.3414 (3) | 0.70535 (15) | 0.0176 (4) | |
C7 | 0.80178 (8) | 0.3043 (3) | 0.79252 (16) | 0.0173 (4) | |
H7 | 0.8000 | 0.2706 | 0.8580 | 0.021* | |
C8 | 0.69121 (8) | 0.3288 (3) | 0.71474 (16) | 0.0173 (4) | |
C9 | 0.68658 (8) | 0.3575 (3) | 0.81138 (16) | 0.0198 (4) | |
H9 | 0.7210 | 0.3856 | 0.8727 | 0.024* | |
C10 | 0.63215 (9) | 0.3452 (3) | 0.81801 (16) | 0.0205 (4) | |
H10 | 0.6305 | 0.3632 | 0.8851 | 0.025* | |
C11 | 0.58576 (9) | 0.2824 (3) | 0.64134 (16) | 0.0199 (4) | |
H11A | 0.5505 | 0.2566 | 0.5811 | 0.024* | |
C12 | 0.63867 (8) | 0.2903 (3) | 0.62852 (16) | 0.0198 (4) | |
H12A | 0.6392 | 0.2694 | 0.5608 | 0.024* | |
H11 | 0.4524 (11) | 0.124 (4) | 0.5786 (11) | 0.048 (9)* | |
H12 | 0.4935 (8) | 0.004 (3) | 0.6396 (17) | 0.023 (6)* | |
H21 | 0.5473 (10) | 0.452 (3) | 0.9275 (11) | 0.030 (7)* | |
H22 | 0.5096 (10) | 0.591 (3) | 0.869 (2) | 0.043 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.01032 (18) | 0.0186 (2) | 0.0183 (2) | 0.000 | 0.00608 (14) | 0.000 |
N1 | 0.0125 (7) | 0.0184 (8) | 0.0222 (9) | −0.0001 (6) | 0.0061 (7) | 0.0022 (7) |
O1 | 0.0189 (7) | 0.0361 (9) | 0.0215 (8) | −0.0012 (6) | 0.0043 (6) | 0.0023 (6) |
O2 | 0.0118 (7) | 0.0227 (8) | 0.0362 (9) | 0.0008 (5) | 0.0077 (6) | 0.0012 (6) |
O1W | 0.0155 (7) | 0.0222 (8) | 0.0216 (8) | 0.0010 (6) | 0.0071 (6) | −0.0019 (6) |
O2W | 0.0156 (7) | 0.0225 (8) | 0.0226 (8) | 0.0028 (6) | 0.0056 (6) | −0.0022 (6) |
C1 | 0.0154 (9) | 0.0154 (9) | 0.0259 (11) | −0.0002 (7) | 0.0056 (8) | −0.0042 (8) |
C2 | 0.0149 (9) | 0.0145 (9) | 0.0214 (10) | −0.0026 (7) | 0.0064 (8) | −0.0045 (8) |
C3 | 0.0149 (9) | 0.0215 (10) | 0.0294 (11) | −0.0027 (8) | 0.0122 (8) | −0.0026 (8) |
C4 | 0.0212 (10) | 0.0277 (11) | 0.0202 (10) | −0.0032 (8) | 0.0115 (8) | −0.0003 (9) |
C5 | 0.0158 (9) | 0.0234 (10) | 0.0206 (10) | −0.0007 (8) | 0.0054 (8) | −0.0002 (8) |
C6 | 0.0135 (9) | 0.0176 (9) | 0.0223 (10) | −0.0020 (7) | 0.0078 (8) | −0.0033 (7) |
C7 | 0.0156 (9) | 0.0179 (9) | 0.0187 (9) | 0.0002 (7) | 0.0071 (8) | 0.0002 (8) |
C8 | 0.0149 (9) | 0.0163 (9) | 0.0205 (10) | 0.0014 (7) | 0.0069 (8) | 0.0024 (7) |
C9 | 0.0130 (9) | 0.0242 (10) | 0.0204 (10) | 0.0011 (8) | 0.0047 (8) | 0.0004 (8) |
C10 | 0.0175 (9) | 0.0255 (10) | 0.0198 (10) | 0.0014 (8) | 0.0090 (8) | 0.0003 (8) |
C11 | 0.0139 (9) | 0.0237 (10) | 0.0210 (10) | −0.0004 (8) | 0.0057 (8) | 0.0008 (8) |
C12 | 0.0167 (10) | 0.0230 (10) | 0.0196 (10) | −0.0007 (8) | 0.0071 (8) | −0.0007 (8) |
Ni1—O1W | 2.0627 (14) | C3—C4 | 1.388 (3) |
Ni1—O1Wi | 2.0627 (14) | C3—H3 | 0.9500 |
Ni1—O2W | 2.0811 (14) | C4—C5 | 1.389 (3) |
Ni1—O2Wi | 2.0811 (14) | C4—H4 | 0.9500 |
Ni1—N1i | 2.0931 (16) | C5—C6 | 1.396 (3) |
Ni1—N1 | 2.0931 (16) | C5—H5 | 0.9500 |
N1—C10 | 1.342 (3) | C6—C7 | 1.395 (3) |
N1—C11 | 1.346 (2) | C6—C8 | 1.486 (3) |
O1—C1 | 1.256 (3) | C7—H7 | 0.9500 |
O2—C1 | 1.256 (2) | C8—C12 | 1.392 (3) |
O1W—H11 | 0.838 (10) | C8—C9 | 1.396 (3) |
O1W—H12 | 0.834 (10) | C9—C10 | 1.378 (3) |
O2W—H21 | 0.840 (10) | C9—H9 | 0.9500 |
O2W—H22 | 0.833 (10) | C10—H10 | 0.9500 |
C1—C2 | 1.511 (3) | C11—C12 | 1.380 (3) |
C2—C3 | 1.390 (3) | C11—H11A | 0.9500 |
C2—C7 | 1.391 (3) | C12—H12A | 0.9500 |
O1W—Ni1—O1Wi | 84.85 (8) | C4—C3—C2 | 119.26 (17) |
O1W—Ni1—O2W | 176.09 (6) | C4—C3—H3 | 120.4 |
O1Wi—Ni1—O2W | 91.32 (6) | C2—C3—H3 | 120.4 |
O1W—Ni1—O2Wi | 91.32 (6) | C3—C4—C5 | 120.92 (18) |
O1Wi—Ni1—O2Wi | 176.09 (6) | C3—C4—H4 | 119.5 |
O2W—Ni1—O2Wi | 92.51 (8) | C5—C4—H4 | 119.5 |
O1W—Ni1—N1i | 90.11 (6) | C4—C5—C6 | 120.31 (18) |
O1Wi—Ni1—N1i | 92.32 (6) | C4—C5—H5 | 119.8 |
O2W—Ni1—N1i | 89.24 (6) | C6—C5—H5 | 119.8 |
O2Wi—Ni1—N1i | 88.48 (6) | C7—C6—C5 | 118.45 (17) |
O1W—Ni1—N1 | 92.32 (6) | C7—C6—C8 | 120.35 (17) |
O1Wi—Ni1—N1 | 90.11 (6) | C5—C6—C8 | 121.19 (17) |
O2W—Ni1—N1 | 88.48 (6) | C2—C7—C6 | 121.21 (18) |
O2Wi—Ni1—N1 | 89.24 (6) | C2—C7—H7 | 119.4 |
N1i—Ni1—N1 | 176.71 (9) | C6—C7—H7 | 119.4 |
C10—N1—C11 | 116.48 (16) | C12—C8—C9 | 116.40 (17) |
C10—N1—Ni1 | 121.33 (13) | C12—C8—C6 | 122.37 (18) |
C11—N1—Ni1 | 122.18 (13) | C9—C8—C6 | 121.23 (17) |
Ni1—O1W—H11 | 113 (2) | C10—C9—C8 | 120.12 (18) |
Ni1—O1W—H12 | 117.0 (16) | C10—C9—H9 | 119.9 |
H11—O1W—H12 | 105 (2) | C8—C9—H9 | 119.9 |
Ni1—O2W—H21 | 109.7 (18) | N1—C10—C9 | 123.49 (18) |
Ni1—O2W—H22 | 117.8 (19) | N1—C10—H10 | 118.3 |
H21—O2W—H22 | 110 (2) | C9—C10—H10 | 118.3 |
O1—C1—O2 | 124.36 (19) | N1—C11—C12 | 123.49 (19) |
O1—C1—C2 | 116.99 (17) | N1—C11—H11A | 118.3 |
O2—C1—C2 | 118.65 (18) | C12—C11—H11A | 118.3 |
C3—C2—C7 | 119.85 (18) | C11—C12—C8 | 120.03 (19) |
C3—C2—C1 | 120.82 (17) | C11—C12—H12A | 120.0 |
C7—C2—C1 | 119.32 (18) | C8—C12—H12A | 120.0 |
O1W—Ni1—N1—C10 | −144.22 (15) | C3—C2—C7—C6 | 0.1 (3) |
O1Wi—Ni1—N1—C10 | −59.36 (15) | C1—C2—C7—C6 | −179.93 (17) |
O2W—Ni1—N1—C10 | 31.96 (15) | C5—C6—C7—C2 | −0.4 (3) |
O2Wi—Ni1—N1—C10 | 124.49 (15) | C8—C6—C7—C2 | −179.88 (17) |
O1W—Ni1—N1—C11 | 36.93 (15) | C7—C6—C8—C12 | −154.18 (19) |
O1Wi—Ni1—N1—C11 | 121.79 (15) | C5—C6—C8—C12 | 26.4 (3) |
O2W—Ni1—N1—C11 | −146.89 (15) | C7—C6—C8—C9 | 26.6 (3) |
O2Wi—Ni1—N1—C11 | −54.36 (15) | C5—C6—C8—C9 | −152.89 (19) |
O1—C1—C2—C3 | −177.38 (18) | C12—C8—C9—C10 | 0.6 (3) |
O2—C1—C2—C3 | 3.5 (3) | C6—C8—C9—C10 | 179.95 (18) |
O1—C1—C2—C7 | 2.7 (3) | C11—N1—C10—C9 | 0.8 (3) |
O2—C1—C2—C7 | −176.42 (17) | Ni1—N1—C10—C9 | −178.14 (15) |
C7—C2—C3—C4 | 0.0 (3) | C8—C9—C10—N1 | −1.1 (3) |
C1—C2—C3—C4 | −179.89 (18) | C10—N1—C11—C12 | 0.0 (3) |
C2—C3—C4—C5 | 0.1 (3) | Ni1—N1—C11—C12 | 178.89 (14) |
C3—C4—C5—C6 | −0.4 (3) | N1—C11—C12—C8 | −0.4 (3) |
C4—C5—C6—C7 | 0.5 (3) | C9—C8—C12—C11 | 0.1 (3) |
C4—C5—C6—C8 | 179.99 (18) | C6—C8—C12—C11 | −179.22 (18) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H11···O1ii | 0.84 (1) | 1.88 (1) | 2.682 (2) | 160 (3) |
O1w—H12···O2iii | 0.83 (1) | 1.91 (1) | 2.734 (2) | 170 (2) |
O2w—H21···O1iv | 0.84 (1) | 1.93 (1) | 2.732 (2) | 159 (2) |
O2w—H22···O2v | 0.83 (1) | 1.88 (1) | 2.711 (2) | 177 (3) |
Symmetry codes: (ii) x−1/2, −y+1/2, z−1/2; (iii) −x+3/2, y−1/2, −z+3/2; (iv) −x+3/2, −y+1/2, −z+2; (v) x−1/2, y+1/2, z. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C12H8NO2)2(H2O)4] |
Mr | 527.16 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 173 |
a, b, c (Å) | 24.564 (3), 7.0520 (8), 13.781 (2) |
β (°) | 113.325 (2) |
V (Å3) | 2192.1 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.94 |
Crystal size (mm) | 0.47 × 0.31 × 0.08 |
Data collection | |
Diffractometer | Bruker APEXII diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.666, 0.929 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5587, 2360, 1977 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.090, 1.09 |
No. of reflections | 2360 |
No. of parameters | 175 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.38, −0.27 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H11···O1i | 0.84 (1) | 1.88 (1) | 2.682 (2) | 160 (3) |
O1w—H12···O2ii | 0.83 (1) | 1.91 (1) | 2.734 (2) | 170 (2) |
O2w—H21···O1iii | 0.84 (1) | 1.93 (1) | 2.732 (2) | 159 (2) |
O2w—H22···O2iv | 0.83 (1) | 1.88 (1) | 2.711 (2) | 177 (3) |
Symmetry codes: (i) x−1/2, −y+1/2, z−1/2; (ii) −x+3/2, y−1/2, −z+3/2; (iii) −x+3/2, −y+1/2, −z+2; (iv) x−1/2, y+1/2, z. |
Acknowledgements
This work was supported by the Guangxi Graduate Education Innovation Program (2009106020703M44) and the University of Malaya.
References
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