metal-organic compounds
Poly[[di-μ-aqua-(μ-4-formyl-2-methoxyphenolato)disodium] 4-formyl-2-methoxyphenolate]
aMaterials Chemistry Laboratory, Department of Chemistry, GC University, Lahore 54000, Pakistan, bForman Christian College (Chartered University), Ferozepur Road, Lahore, Pakistan, and cDepartment of Physics, Ondokuz Mayıs University, TR-55139 Samsun, Turkey
*Correspondence e-mail: iukhan.gcu@gmail.com, onurs@omu.edu.tr
In the title coordination polymer, {[Na2(C8H7O3)(H2O)4](C8H7O3)}n, all the non-H atoms except the water O atoms lie on a crystallographic mirror plane. One sodium cation is bonded to four water O atoms and one vanillinate O atom in a distorted square-based pyramidal arrangement; the other Na+ ion is six-coordinated by four water O atoms and two vanillinate O atoms in an irregular geometry. One of the vanillinate anions is directly bonded to two sodium ions, whilst the other only interacts with the polymeric network by way of hydrogen bonds. In the crystal, a two-dimensional polymeric array is formed; this is reinforced by O—H⋯O hydrogen bonds, which generate R21(6) and R22(20) loops.
Related literature
For related crystal structures, see: Velavan et al. (1995); Iwasaki (1973); Iwasaki et al. (1976); Usman et al. (2002); Li et al. (1999); Kaduk (2000). For graph-set notation, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810000711/hb5277sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810000711/hb5277Isup2.hkl
Sodium hydroxide (0.66 g, 0.0165 mmol) was dissolved in a mixture of distilled water (10 ml) and ethanol (8 ml). The solution was cooled to room temperature. Half of the mixture of vanillin (1 g, 0.00658 mmol) and acetone (0.19 g, 0.00329 mmol) added to the above solution and stirred at room temperature for 15 minute then the remaining mixture was added and stirred for 2 h under the same conditions. The greenish-yellow precipitate obtained was filtered and recystalized from methanol to yield colourless blocks of (I).
All H atoms bound to C atoms were refined using a riding model, with C—H = 0.93Å and Uiso(H) = 1.2Ueq(C) for aromatic C, and C—H = 0.96Å and Uiso(H) = 1.5Ueq(C) for methyl C atoms. Water H atom was located in difference maps and refined subject to a restraint of O—H = 0.83 (2) Å.
The crystal structures of vanillin-I (Velavan et al., 1995), the polymorphic forms of isovanillin (Iwasaki, 1973), o-vanillin (Iwasaki et al., 1976) and other vanillin derivatives (Usman et al., 2002; Li et al., 1999) have been reported. We now report the title compound, (I).
The basic polymeric fragment of (I), with
formula [Na2(H2O)2(C8H7O3)2]n, is illustrated in Fig. 1. The Na+ cations are of two coordination types. In the first of these coordination, the Na1 coordination by four O atoms from two equivalent water molecules (O1, O2, O1iv and O2iv) and the bonded carboxylate O atom from vanillin ligand (O6) (Table 1). In the second coordination, cation Na2 is coordinated by four O atoms from two equivalent water molecules (O1, O2, O1vii and O2vii) and two O atoms from vanillin ligand (O7vi and O8vi) [symmetry codes: (iv) x, 1/2 - y, z; (vi) 3/2 - x, -y, 1/2 + z; (vii) x, -1/2 - y, z]. The vanillin ligand five-membered (O7vi/C11vi/C12vi/O8vi/Na2) chelates to the Na atom through the methoxy and hydroxy groups. Two adjacent Na+ cations are linked together by two H2O bridges to form a four-membered ring with an Na2O2 core. The Na1···Na2 separation is 3.7595 (8) Å. Adjacent Na2O2 binuclear motifs are further joined by the vanillin ligand through carboxyl atoms O6, O7 and O8, to produce a one-dimensional chain along the c axis, with an Na1···Na2ii separation of 9.890Å [symmetry code: (ii) 3/2 - x, 1 - y, z - 1/2]; this compares with the corresponding Na···Na distance of 8.006 (3)Å in the three-dimensional Na-terephthalate polymer [Na2(C8H4O4)] (Kaduk, 2000). These chains are connected by the water O atoms [Na1···Na2v = 3.7595 (8) Å; symmetry code: (v) x, 1 + y, z], generating a two-dimensional layer architecture in the crystallographic bc plane (Fig. 2).Water atom O1 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H1B, to atom O8i so forming a C(10)[R22(20)] (Bernstein et al., 1995) chain of rings running parallel to the [0–10] direction and centrosymmetric R22(20) rings centred at (1/2, 1/2+n/2, 1/2) (n = zero or integer). The combination of O1—H1B···O8i and O1ix—H1Bix···O8i hydrogen bonds produce R21(6) ring (Fig. 3). Water atom O2 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H2A, to atom O4ii, while O1ii acts as donor to O5ii, and in this manner a C22(12) chain running parallel to the [00–1] direction. The combination of O2—H2A···O4ii, O1ii—H1Aii···O5ii and O2ix—H2Aix···O4ii hydrogen bonds produce R21(6) and R22(20) rings (Fig. 4).
For related crystal structures, see: Velavan et al. (1995); Iwasaki (1973); Iwasaki et al. (1976); Usman et al. (2002); Li et al. (1999); Kaduk (2000). For graph-set notation, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and SHELXL97 (Sheldrick, 2008).Fig. 1. A view of the asymmetric unit of (I), showing displacement ellipsoids drawn at the 30% probability level. Hydrogen bonds are indicated by dashed lines. | |
Fig. 2. View of part of the crystal structure of compound (I), showing the formation of a coordination polymer chain parallel to the bc plane. For the sake of clarity, the noncoordinated molecule and all H atoms have been omitted. [Symmetry codes: (ii) 3/2 - x, 1 - y, z - 1/2; (iv) x, 3/2 - y, z; (v) x, 1 + y, z; (vi) 3/2 - x, 1 - y, 1/2 + z; (vii) x, 1/2 - y, z; (viii) x, y - 1, z.] | |
Fig. 3. Part of the crystal structure of (I), showing the formation of R21(6) and R22(20) rings. For the sake of clarity, the noncoordinated molecule and H atoms have been omitted. [Symmetry codes: (i) 1 - x, 1 - y, 1 - z; (ix) x, 1/2 - y, z.] | |
Fig. 4. Part of the crystal structure of (I), showing the formation of R21(6) and R22(20) rings. H atoms not involved in these interactions have been omitted for clarity. [Symmetry codes: (ii) 3/2 - x, 1 - y, z - 1/2; (ix) x, 1/2 - y, z.] |
[Na2(C8H7O3)(H2O)4](C8H7O3) | F(000) = 880 |
Mr = 420.32 | Dx = 1.488 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 5113 reflections |
a = 12.2281 (6) Å | θ = 3.0–31.1° |
b = 6.7681 (3) Å | µ = 0.16 mm−1 |
c = 22.6734 (10) Å | T = 296 K |
V = 1876.47 (15) Å3 | Block, colourles |
Z = 4 | 0.42 × 0.33 × 0.24 mm |
Bruker APEXII CCD diffractometer | 2121 independent reflections |
Radiation source: fine-focus sealed tube | 1825 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
phi and ω scans | θmax = 26.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −15→15 |
Tmin = 0.938, Tmax = 0.962 | k = −8→4 |
10469 measured reflections | l = −19→28 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.044 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.119 | w = 1/[σ2(Fo2) + (0.0476P)2 + 1.7283P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.001 |
2121 reflections | Δρmax = 0.63 e Å−3 |
180 parameters | Δρmin = −0.67 e Å−3 |
12 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0138 (14) |
[Na2(C8H7O3)(H2O)4](C8H7O3) | V = 1876.47 (15) Å3 |
Mr = 420.32 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 12.2281 (6) Å | µ = 0.16 mm−1 |
b = 6.7681 (3) Å | T = 296 K |
c = 22.6734 (10) Å | 0.42 × 0.33 × 0.24 mm |
Bruker APEXII CCD diffractometer | 2121 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | 1825 reflections with I > 2σ(I) |
Tmin = 0.938, Tmax = 0.962 | Rint = 0.020 |
10469 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 12 restraints |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.63 e Å−3 |
2121 reflections | Δρmin = −0.67 e Å−3 |
180 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.6494 (2) | 0.7500 | 0.97772 (12) | 0.0327 (7) | |
C2 | 0.7164 (2) | 0.7500 | 0.92725 (13) | 0.0321 (7) | |
H2 | 0.7920 | 0.7500 | 0.9315 | 0.039* | |
C3 | 0.6713 (2) | 0.7500 | 0.87213 (12) | 0.0263 (6) | |
C4 | 0.5554 (2) | 0.7500 | 0.86488 (12) | 0.0260 (6) | |
C5 | 0.4908 (2) | 0.7500 | 0.91595 (13) | 0.0317 (7) | |
H5 | 0.4151 | 0.7500 | 0.9123 | 0.038* | |
C6 | 0.5368 (2) | 0.7500 | 0.97117 (13) | 0.0331 (7) | |
H6 | 0.4921 | 0.7500 | 1.0044 | 0.040* | |
C7 | 0.6978 (3) | 0.7500 | 1.03533 (14) | 0.0505 (10) | |
H7 | 0.7738 | 0.7500 | 1.0370 | 0.061* | |
C8 | 0.8444 (2) | 0.7500 | 0.82464 (14) | 0.0345 (7) | |
H8A | 0.8757 | 0.7214 | 0.7868 | 0.052* | 0.50 |
H8B | 0.8669 | 0.6512 | 0.8525 | 0.052* | 0.50 |
H8C | 0.8689 | 0.8774 | 0.8377 | 0.052* | 0.50 |
C9 | 0.6086 (3) | 0.7500 | 0.49146 (15) | 0.0582 (12) | |
C10 | 0.7012 (2) | 0.7500 | 0.45577 (13) | 0.0318 (7) | |
H10 | 0.7704 | 0.7500 | 0.4728 | 0.038* | |
C11 | 0.6907 (2) | 0.7500 | 0.39567 (12) | 0.0258 (6) | |
C12 | 0.5862 (2) | 0.7500 | 0.36734 (13) | 0.0336 (7) | |
C13 | 0.4958 (3) | 0.7500 | 0.40446 (17) | 0.092 (2) | |
H13 | 0.4260 | 0.7500 | 0.3882 | 0.111* | |
C14 | 0.5076 (3) | 0.7500 | 0.46474 (18) | 0.099 (2) | |
H14 | 0.4452 | 0.7500 | 0.4882 | 0.118* | |
C15 | 0.6143 (3) | 0.7500 | 0.55467 (17) | 0.0725 (15) | |
H15 | 0.5477 | 0.7500 | 0.5745 | 0.087* | |
C16 | 0.8841 (2) | 0.7500 | 0.38079 (14) | 0.0364 (7) | |
H16A | 0.8962 | 0.8710 | 0.4019 | 0.055* | 0.50 |
H16B | 0.9364 | 0.7389 | 0.3494 | 0.055* | 0.50 |
H16C | 0.8922 | 0.6401 | 0.4072 | 0.055* | 0.50 |
O1 | 0.59561 (12) | 0.4859 (3) | 0.73010 (7) | 0.0386 (4) | |
H1A | 0.5721 (19) | 0.552 (4) | 0.7574 (10) | 0.047 (8)* | |
H1B | 0.5423 (18) | 0.426 (4) | 0.7162 (11) | 0.060 (9)* | |
O2 | 0.83431 (12) | 0.4956 (3) | 0.68524 (7) | 0.0353 (4) | |
H2A | 0.835 (2) | 0.439 (4) | 0.6534 (9) | 0.047 (8)* | |
H2B | 0.8935 (17) | 0.557 (4) | 0.6870 (11) | 0.051 (8)* | |
O3 | 0.72906 (16) | 0.7500 | 0.82013 (9) | 0.0352 (5) | |
O4 | 0.6492 (2) | 0.7500 | 1.08231 (10) | 0.0528 (7) | |
O5 | 0.51190 (16) | 0.7500 | 0.81191 (8) | 0.0319 (5) | |
O6 | 0.6945 (2) | 0.7500 | 0.58503 (11) | 0.0611 (8) | |
O7 | 0.77607 (16) | 0.7500 | 0.35679 (9) | 0.0367 (5) | |
O8 | 0.57840 (16) | 0.7500 | 0.31048 (8) | 0.0325 (5) | |
Na1 | 0.69720 (10) | 0.7500 | 0.68819 (5) | 0.0353 (3) | |
Na2 | 0.75745 (10) | 0.2500 | 0.75268 (5) | 0.0343 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0341 (15) | 0.0405 (18) | 0.0234 (14) | 0.000 | −0.0004 (11) | 0.000 |
C2 | 0.0253 (13) | 0.0429 (18) | 0.0282 (14) | 0.000 | −0.0014 (11) | 0.000 |
C3 | 0.0260 (13) | 0.0284 (15) | 0.0245 (13) | 0.000 | 0.0031 (10) | 0.000 |
C4 | 0.0265 (13) | 0.0271 (15) | 0.0245 (13) | 0.000 | −0.0018 (10) | 0.000 |
C5 | 0.0241 (13) | 0.0400 (17) | 0.0309 (15) | 0.000 | 0.0014 (11) | 0.000 |
C6 | 0.0322 (14) | 0.0404 (18) | 0.0268 (14) | 0.000 | 0.0053 (11) | 0.000 |
C7 | 0.0400 (17) | 0.084 (3) | 0.0279 (16) | 0.000 | −0.0038 (13) | 0.000 |
C8 | 0.0274 (14) | 0.0409 (18) | 0.0352 (16) | 0.000 | 0.0065 (12) | 0.000 |
C9 | 0.0366 (17) | 0.110 (4) | 0.0276 (17) | 0.000 | 0.0020 (13) | 0.000 |
C10 | 0.0299 (14) | 0.0375 (17) | 0.0281 (14) | 0.000 | −0.0045 (11) | 0.000 |
C11 | 0.0268 (13) | 0.0240 (14) | 0.0267 (13) | 0.000 | 0.0007 (10) | 0.000 |
C12 | 0.0295 (14) | 0.0457 (19) | 0.0256 (14) | 0.000 | −0.0029 (11) | 0.000 |
C13 | 0.0249 (16) | 0.219 (7) | 0.0333 (18) | 0.000 | −0.0012 (14) | 0.000 |
C14 | 0.0368 (19) | 0.218 (6) | 0.041 (2) | 0.000 | 0.0087 (17) | 0.000 |
C15 | 0.047 (2) | 0.138 (5) | 0.0322 (19) | 0.000 | 0.0065 (16) | 0.000 |
C16 | 0.0245 (13) | 0.0486 (19) | 0.0363 (16) | 0.000 | −0.0056 (12) | 0.000 |
O1 | 0.0325 (8) | 0.0420 (10) | 0.0413 (9) | −0.0063 (7) | 0.0053 (7) | −0.0109 (8) |
O2 | 0.0347 (8) | 0.0402 (9) | 0.0311 (8) | −0.0032 (7) | 0.0039 (6) | −0.0014 (7) |
O3 | 0.0256 (10) | 0.0557 (15) | 0.0243 (10) | 0.000 | 0.0028 (8) | 0.000 |
O4 | 0.0623 (16) | 0.0727 (19) | 0.0233 (11) | 0.000 | −0.0007 (10) | 0.000 |
O5 | 0.0266 (9) | 0.0442 (13) | 0.0249 (10) | 0.000 | −0.0030 (8) | 0.000 |
O6 | 0.0559 (16) | 0.099 (2) | 0.0287 (12) | 0.000 | −0.0051 (11) | 0.000 |
O7 | 0.0243 (10) | 0.0597 (15) | 0.0262 (10) | 0.000 | −0.0024 (8) | 0.000 |
O8 | 0.0291 (10) | 0.0442 (13) | 0.0242 (10) | 0.000 | −0.0039 (8) | 0.000 |
Na1 | 0.0336 (6) | 0.0352 (7) | 0.0371 (7) | 0.000 | 0.0020 (5) | 0.000 |
Na2 | 0.0337 (6) | 0.0422 (7) | 0.0272 (6) | 0.000 | 0.0001 (5) | 0.000 |
C1—C6 | 1.385 (4) | C12—C13 | 1.390 (5) |
C1—C2 | 1.407 (4) | C13—C14 | 1.374 (6) |
C1—C7 | 1.434 (4) | C13—H13 | 0.9300 |
C2—C3 | 1.366 (4) | C14—H14 | 0.9300 |
C2—H2 | 0.9300 | C15—O6 | 1.198 (5) |
C3—O3 | 1.374 (3) | C15—H15 | 0.9300 |
C3—C4 | 1.427 (4) | C16—O7 | 1.428 (3) |
C4—O5 | 1.314 (3) | C16—H16A | 0.9600 |
C4—C5 | 1.402 (4) | C16—H16B | 0.9600 |
C5—C6 | 1.372 (4) | C16—H16C | 0.9600 |
C5—H5 | 0.9300 | O1—H1A | 0.817 (17) |
C6—H6 | 0.9300 | O1—H1B | 0.830 (17) |
C7—O4 | 1.220 (4) | O2—H2A | 0.816 (17) |
C7—H7 | 0.9300 | O2—H2B | 0.836 (17) |
C8—O3 | 1.414 (3) | Na1—O1 | 2.3751 (18) |
C8—H8A | 0.9600 | Na1—O2 | 2.4043 (18) |
C8—H8B | 0.9600 | Na1—O6 | 2.339 (3) |
C8—H8C | 0.9600 | Na1—O1i | 2.3751 (18) |
C9—C14 | 1.376 (5) | Na1—O2i | 2.4043 (18) |
C9—C10 | 1.391 (4) | Na2—O1 | 2.5938 (19) |
C9—C15 | 1.435 (5) | Na2—O2 | 2.4462 (18) |
C10—C11 | 1.369 (4) | Na2—O2ii | 2.4462 (18) |
C10—H10 | 0.9300 | Na2—O1ii | 2.5938 (19) |
C11—O7 | 1.366 (3) | Na2—O7iii | 2.396 (2) |
C11—C12 | 1.430 (4) | Na2—O8iii | 2.397 (2) |
C12—O8 | 1.293 (3) | ||
C6—C1—C2 | 119.4 (3) | H16A—C16—H16C | 109.5 |
C6—C1—C7 | 120.6 (3) | H16B—C16—H16C | 109.5 |
C2—C1—C7 | 120.0 (3) | Na1—O1—Na2 | 98.23 (6) |
C3—C2—C1 | 120.6 (3) | Na1—O1—H1A | 94.3 (19) |
C3—C2—H2 | 119.7 | Na2—O1—H1A | 117.2 (19) |
C1—C2—H2 | 119.7 | Na1—O1—H1B | 129 (2) |
C2—C3—O3 | 125.3 (2) | Na2—O1—H1B | 112 (2) |
C2—C3—C4 | 120.4 (2) | H1A—O1—H1B | 106 (2) |
O3—C3—C4 | 114.3 (2) | Na1—O2—Na2 | 101.61 (6) |
O5—C4—C5 | 121.8 (2) | Na1—O2—H2A | 111.6 (19) |
O5—C4—C3 | 120.5 (2) | Na2—O2—H2A | 104.0 (19) |
C5—C4—C3 | 117.7 (2) | Na1—O2—H2B | 104.2 (19) |
C6—C5—C4 | 121.5 (3) | Na2—O2—H2B | 129.9 (19) |
C6—C5—H5 | 119.2 | H2A—O2—H2B | 105 (2) |
C4—C5—H5 | 119.2 | C3—O3—C8 | 116.8 (2) |
C5—C6—C1 | 120.3 (3) | C3—O3—Na1 | 141.66 (16) |
C5—C6—H6 | 119.8 | C8—O3—Na1 | 101.57 (16) |
C1—C6—H6 | 119.8 | C15—O6—Na1 | 125.9 (3) |
O4—C7—C1 | 126.4 (3) | C11—O7—C16 | 117.4 (2) |
O4—C7—H7 | 116.8 | C11—O7—Na2iv | 120.33 (16) |
C1—C7—H7 | 116.8 | C16—O7—Na2iv | 122.24 (17) |
O3—C8—H8A | 109.5 | C12—O8—Na2iv | 118.88 (18) |
O3—C8—H8B | 109.5 | O6—Na1—O1i | 113.13 (7) |
H8A—C8—H8B | 109.5 | O6—Na1—O1 | 113.13 (7) |
O3—C8—H8C | 109.5 | O1i—Na1—O1 | 97.63 (9) |
H8A—C8—H8C | 109.5 | O6—Na1—O2i | 88.96 (7) |
H8B—C8—H8C | 109.5 | O1i—Na1—O2i | 80.61 (6) |
C14—C9—C10 | 118.3 (3) | O1—Na1—O2i | 156.19 (8) |
C14—C9—C15 | 118.9 (4) | O6—Na1—O2 | 88.96 (7) |
C10—C9—C15 | 122.8 (3) | O1i—Na1—O2 | 156.19 (8) |
C11—C10—C9 | 120.2 (3) | O1—Na1—O2 | 80.61 (5) |
C11—C10—H10 | 119.9 | O2i—Na1—O2 | 91.48 (9) |
C9—C10—H10 | 119.9 | O6—Na1—O3 | 173.38 (9) |
O7—C11—C10 | 124.8 (3) | O1i—Na1—O3 | 70.78 (5) |
O7—C11—C12 | 113.1 (2) | O1—Na1—O3 | 70.78 (5) |
C10—C11—C12 | 122.1 (3) | O2i—Na1—O3 | 86.42 (5) |
O8—C12—C13 | 123.0 (3) | O2—Na1—O3 | 86.42 (5) |
O8—C12—C11 | 120.9 (3) | O7iii—Na2—O8iii | 66.71 (7) |
C13—C12—C11 | 116.0 (3) | O7iii—Na2—O2ii | 132.97 (5) |
C14—C13—C12 | 121.3 (3) | O8iii—Na2—O2ii | 91.15 (6) |
C14—C13—H13 | 119.4 | O7iii—Na2—O2 | 132.97 (5) |
C12—C13—H13 | 119.4 | O8iii—Na2—O2 | 91.15 (6) |
C13—C14—C9 | 122.1 (4) | O2ii—Na2—O2 | 85.60 (9) |
C13—C14—H14 | 118.9 | O7iii—Na2—O1ii | 93.66 (6) |
C9—C14—H14 | 118.9 | O8iii—Na2—O1ii | 138.31 (5) |
O6—C15—C9 | 127.8 (4) | O2ii—Na2—O1ii | 75.61 (6) |
O6—C15—H15 | 116.1 | O2—Na2—O1ii | 126.01 (7) |
C9—C15—H15 | 116.1 | O7iii—Na2—O1 | 93.66 (6) |
O7—C16—H16A | 109.5 | O8iii—Na2—O1 | 138.31 (5) |
O7—C16—H16B | 109.5 | O2ii—Na2—O1 | 126.01 (7) |
H16A—C16—H16B | 109.5 | O2—Na2—O1 | 75.61 (5) |
O7—C16—H16C | 109.5 | O1ii—Na2—O1 | 75.98 (8) |
C6—C1—C2—C3 | 0.000 (2) | C10—C11—O7—Na2iv | 180.0 |
C7—C1—C2—C3 | 180.000 (1) | C12—C11—O7—Na2iv | 0.0 |
C1—C2—C3—O3 | 180.000 (1) | C13—C12—O8—Na2iv | 180.0 |
C1—C2—C3—C4 | 0.000 (1) | C11—C12—O8—Na2iv | 0.0 |
C2—C3—C4—O5 | 180.000 (1) | C15—O6—Na1—O1i | −54.92 (6) |
O3—C3—C4—O5 | 0.000 (1) | C15—O6—Na1—O1 | 54.92 (6) |
C2—C3—C4—C5 | 0.000 (1) | C15—O6—Na1—O2i | −134.25 (4) |
O3—C3—C4—C5 | 180.000 (1) | C15—O6—Na1—O2 | 134.25 (4) |
O5—C4—C5—C6 | 180.000 (1) | Na2—O1—Na1—O6 | 99.60 (9) |
C3—C4—C5—C6 | 0.000 (2) | Na2—O1—Na1—O1i | −141.19 (5) |
C4—C5—C6—C1 | 0.000 (2) | Na2—O1—Na1—O2i | −57.16 (18) |
C2—C1—C6—C5 | 0.000 (2) | Na2—O1—Na1—O2 | 14.80 (6) |
C7—C1—C6—C5 | 180.000 (1) | Na2—O1—Na1—O3 | −74.67 (6) |
C6—C1—C7—O4 | 0.000 (2) | Na2—O2—Na1—O6 | −129.53 (7) |
C2—C1—C7—O4 | 180.000 (2) | Na2—O2—Na1—O1i | 71.75 (18) |
C14—C9—C10—C11 | 0.0 | Na2—O2—Na1—O1 | −15.88 (7) |
C15—C9—C10—C11 | 180.0 | Na2—O2—Na1—O2i | 141.54 (5) |
C9—C10—C11—O7 | 180.0 | Na2—O2—Na1—O3 | 55.22 (6) |
C9—C10—C11—C12 | 0.0 | C3—O3—Na1—O1i | 52.85 (5) |
O7—C11—C12—O8 | 0.0 | C8—O3—Na1—O1i | −127.15 (5) |
C10—C11—C12—O8 | 180.0 | C3—O3—Na1—O1 | −52.85 (5) |
O7—C11—C12—C13 | 180.0 | C8—O3—Na1—O1 | 127.15 (5) |
C10—C11—C12—C13 | 0.0 | C3—O3—Na1—O2i | 134.14 (4) |
O8—C12—C13—C14 | 180.0 | C8—O3—Na1—O2i | −45.86 (4) |
C11—C12—C13—C14 | 0.0 | C3—O3—Na1—O2 | −134.14 (4) |
C12—C13—C14—C9 | 0.000 (1) | C8—O3—Na1—O2 | 45.86 (4) |
C10—C9—C14—C13 | 0.000 (1) | Na1—O2—Na2—O7iii | −66.66 (11) |
C15—C9—C14—C13 | 180.0 | Na1—O2—Na2—O8iii | −125.21 (6) |
C14—C9—C15—O6 | 180.0 | Na1—O2—Na2—O2ii | 143.73 (5) |
C10—C9—C15—O6 | 0.000 (1) | Na1—O2—Na2—O1ii | 75.08 (9) |
C2—C3—O3—C8 | 0.000 (1) | Na1—O2—Na2—O1 | 14.79 (6) |
C4—C3—O3—C8 | 180.000 (1) | Na1—O1—Na2—O7iii | 118.71 (6) |
C2—C3—O3—Na1 | 180.000 (1) | Na1—O1—Na2—O8iii | 60.30 (12) |
C4—C3—O3—Na1 | 0.000 (1) | Na1—O1—Na2—O2ii | −88.29 (9) |
C9—C15—O6—Na1 | 180.0 | Na1—O1—Na2—O2 | −14.81 (6) |
C10—C11—O7—C16 | 0.0 | Na1—O1—Na2—O1ii | −148.42 (4) |
C12—C11—O7—C16 | 180.0 |
Symmetry codes: (i) x, −y+3/2, z; (ii) x, −y+1/2, z; (iii) −x+3/2, −y+1, z+1/2; (iv) −x+3/2, −y+1, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O5 | 0.82 (2) | 1.97 (2) | 2.772 (2) | 169 (3) |
O1—H1B···O8v | 0.83 (2) | 1.99 (2) | 2.815 (2) | 172 (3) |
O2—H2A···O4iv | 0.82 (2) | 2.07 (2) | 2.872 (2) | 168 (3) |
O2—H2B···O5vi | 0.84 (2) | 1.95 (2) | 2.772 (2) | 168 (3) |
Symmetry codes: (iv) −x+3/2, −y+1, z−1/2; (v) −x+1, −y+1, −z+1; (vi) x+1/2, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [Na2(C8H7O3)(H2O)4](C8H7O3) |
Mr | 420.32 |
Crystal system, space group | Orthorhombic, Pnma |
Temperature (K) | 296 |
a, b, c (Å) | 12.2281 (6), 6.7681 (3), 22.6734 (10) |
V (Å3) | 1876.47 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.16 |
Crystal size (mm) | 0.42 × 0.33 × 0.24 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2007) |
Tmin, Tmax | 0.938, 0.962 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10469, 2121, 1825 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.119, 1.07 |
No. of reflections | 2121 |
No. of parameters | 180 |
No. of restraints | 12 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.63, −0.67 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999) and SHELXL97 (Sheldrick, 2008).
Na1—O1 | 2.3751 (18) | Na2—O2 | 2.4462 (18) |
Na1—O2 | 2.4043 (18) | Na2—O7i | 2.396 (2) |
Na1—O6 | 2.339 (3) | Na2—O8i | 2.397 (2) |
Na2—O1 | 2.5938 (19) | ||
O7i—Na2—O1 | 93.66 (6) | O2—Na2—O1 | 75.61 (5) |
O8i—Na2—O1 | 138.31 (5) | O1ii—Na2—O1 | 75.98 (8) |
O2ii—Na2—O1 | 126.01 (7) |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O5 | 0.817 (17) | 1.965 (17) | 2.772 (2) | 169 (3) |
O1—H1B···O8iii | 0.830 (17) | 1.991 (17) | 2.815 (2) | 172 (3) |
O2—H2A···O4iv | 0.816 (17) | 2.069 (18) | 2.872 (2) | 168 (3) |
O2—H2B···O5v | 0.836 (17) | 1.950 (18) | 2.772 (2) | 168 (3) |
Symmetry codes: (iii) −x+1, −y+1, −z+1; (iv) −x+3/2, −y+1, z−1/2; (v) x+1/2, y, −z+3/2. |
Acknowledgements
The authors acknowledge the Higher Education Commission of Pakistan for the purchase of diffractometer under the grant of Strengthning of the Materials Chemistry Laboratory at GC University, Lahore, Pakistan.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The crystal structures of vanillin-I (Velavan et al., 1995), the polymorphic forms of isovanillin (Iwasaki, 1973), o-vanillin (Iwasaki et al., 1976) and other vanillin derivatives (Usman et al., 2002; Li et al., 1999) have been reported. We now report the title compound, (I).
The basic polymeric fragment of (I), with asymmetric unit formula [Na2(H2O)2(C8H7O3)2]n, is illustrated in Fig. 1. The Na+ cations are of two coordination types. In the first of these coordination, the Na1 coordination by four O atoms from two equivalent water molecules (O1, O2, O1iv and O2iv) and the bonded carboxylate O atom from vanillin ligand (O6) (Table 1). In the second coordination, cation Na2 is coordinated by four O atoms from two equivalent water molecules (O1, O2, O1vii and O2vii) and two O atoms from vanillin ligand (O7vi and O8vi) [symmetry codes: (iv) x, 1/2 - y, z; (vi) 3/2 - x, -y, 1/2 + z; (vii) x, -1/2 - y, z]. The vanillin ligand five-membered (O7vi/C11vi/C12vi/O8vi/Na2) chelates to the Na atom through the methoxy and hydroxy groups. Two adjacent Na+ cations are linked together by two H2O bridges to form a four-membered ring with an Na2O2 core. The Na1···Na2 separation is 3.7595 (8) Å. Adjacent Na2O2 binuclear motifs are further joined by the vanillin ligand through carboxyl atoms O6, O7 and O8, to produce a one-dimensional chain along the c axis, with an Na1···Na2ii separation of 9.890Å [symmetry code: (ii) 3/2 - x, 1 - y, z - 1/2]; this compares with the corresponding Na···Na distance of 8.006 (3)Å in the three-dimensional Na-terephthalate polymer [Na2(C8H4O4)] (Kaduk, 2000). These chains are connected by the water O atoms [Na1···Na2v = 3.7595 (8) Å; symmetry code: (v) x, 1 + y, z], generating a two-dimensional layer architecture in the crystallographic bc plane (Fig. 2).
Water atom O1 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H1B, to atom O8i so forming a C(10)[R22(20)] (Bernstein et al., 1995) chain of rings running parallel to the [0–10] direction and centrosymmetric R22(20) rings centred at (1/2, 1/2+n/2, 1/2) (n = zero or integer). The combination of O1—H1B···O8i and O1ix—H1Bix···O8i hydrogen bonds produce R21(6) ring (Fig. 3). Water atom O2 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H2A, to atom O4ii, while O1ii acts as donor to O5ii, and in this manner a C22(12) chain running parallel to the [00–1] direction. The combination of O2—H2A···O4ii, O1ii—H1Aii···O5ii and O2ix—H2Aix···O4ii hydrogen bonds produce R21(6) and R22(20) rings (Fig. 4).