organic compounds
4-Amino-N-(6-chloro-5-methoxypyrimidin-4-yl)benzenesulfonamide
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India, and cDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
In the title compound, C11H11ClN4O3S, the S atom is bonded in a distorted tetrahedral geometry, by two O atoms, a C atom of the benzene ring and an amino N atom. The essentially planar pyrimidine ring [maximum deviation = 0.020 (1) Å] forms a dihedral angle of 87.57 (5)° with the benzene ring. In the pairs of molecules are linked by intermolecular N—H⋯O hydrogen bonds to generate centrosymmetric R22(8) ring motifs. In addition, molecules are linked into a three-dimensional extended network by intermolecular N—H⋯N, N—H⋯O and C—H⋯O hydrogen bonds.
Related literature
For general background to and applications of the title compound, see: Amir et al. (2007); Calabresi et al. (1975); El-Hashash et al. (1993); Nagaraja et al. (2003); Townsend & Drach (2002). For a related structure, see: Chohan et al. (2008). For details of hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810001121/lh2975sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810001121/lh2975Isup2.hkl
The title compound was obtained as a gift sample from R. L. Fine Chem, Bangalore, India. The compound was used without further purification. Single crystals of good quality were obtained from slow evaporation of an acetonitrile solution. M.p. 447–450 K.
All the H atoms were located in a difference Fourier map and allowed to refine freely [range of C—H = 0.90 (2) - 0.991 (19) Å].
The importance of pyrimidines and analogous compounds in pharmaceutical and biological fields is well known (Townsend et al., 2002). Some substituted pyrimidines and their derivaties have been reported to possess anti-microbial and anti-fungal activities (El-Hashash et al., 1993). Pyrimidines have incidental anti-viral activity against herpes and vaccinia infections (Calabresi et al., 1975). A review on pyrimidines as anti-inflammatory agent is described by Amir et al. (2007).
are an important class of anti-bacterial drugs used in medicine and veterinary practice. Sulfa drugs are widely used in the treatment of infections, especially for patients intolerant to antibiotics. The vast commercial success of these medicinal agents has made the chemistry of to become a major area of research and an important branch of commercial importance in pharmaceutical sciences (Nagaraja et al., 2003). In view of the importance of the title compound possessing potential anti-bacterial properties, its is reported herein.In the title sulfonamide compound (Fig. 1), the geometry around the S1 atom is a distorted tetrahedron, comprising of atoms O1 and O2 of the sulfonyl group, C6 atom of benzene ring and the amino atom N2. The O1–S1–O2 and O2–S1–N2 angles are 119.20 (5) and 102.20 (4)°, respectively, and the C6–S1–N2–C7 torsion angle is -68.95 (9)°. The pyrimidine ring is essentially planar, with r.m.s. deviation of -0.020 (1) Å, and is almost perpendicular to the benzene ring (C1-C6), as indicated by the dihedral angle of 87.57 (5)°. The bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to a related structure (Chohan et al., 2008). In the
pairs of intermolecular N2—H1N2···O2iii hydrogen bonds (see Table 1 for symmetry code) generate R22(8) ring motifs (Bernstein et al., 1995). Neighbouring molecules are linked into a three-dimensional extended network by intermolecular N1—H1N1···N4, N1—H2N1···O1 and C4—H4A···O1 hydrogen bonds (Fig. 2).For general background to and applications of the title compound, see: Amir et al. (2007); Calabresi et al. (1975); El-Hashash et al. (1993); Nagaraja et al. (2003); Townsend et al. (2002). For a related structure, see: Chohan et al. (2008). For details of hydrogen-bond motifs, see : Bernstein et al. (1995). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986). For bond-length data, see: Allen et al. (1987).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids for non-H atoms and the atom-numbering scheme. | |
Fig. 2. Part of the crystal structure of the title compound, viewed along the c axis, showing a three-dimensional extended network. H atoms not involved in intermolecular hydrogen bonds (dashed lines) have been omitted for clarity. |
C11H11ClN4O3S | F(000) = 648 |
Mr = 314.75 | Dx = 1.539 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9451 reflections |
a = 12.8792 (6) Å | θ = 3.1–35.0° |
b = 13.3557 (6) Å | µ = 0.45 mm−1 |
c = 8.0867 (4) Å | T = 100 K |
β = 102.396 (1)° | Plate, colourless |
V = 1358.57 (11) Å3 | 0.44 × 0.33 × 0.12 mm |
Z = 4 |
Bruker SMART APEX DUO area-detector diffractometer | 4863 independent reflections |
Radiation source: fine-focus sealed tube | 4292 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
φ and ω scans | θmax = 32.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −19→18 |
Tmin = 0.829, Tmax = 0.950 | k = −20→20 |
20122 measured reflections | l = −11→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | All H-atom parameters refined |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0475P)2 + 0.4528P] where P = (Fo2 + 2Fc2)/3 |
4863 reflections | (Δ/σ)max < 0.001 |
225 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.37 e Å−3 |
C11H11ClN4O3S | V = 1358.57 (11) Å3 |
Mr = 314.75 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.8792 (6) Å | µ = 0.45 mm−1 |
b = 13.3557 (6) Å | T = 100 K |
c = 8.0867 (4) Å | 0.44 × 0.33 × 0.12 mm |
β = 102.396 (1)° |
Bruker SMART APEX DUO area-detector diffractometer | 4863 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4292 reflections with I > 2σ(I) |
Tmin = 0.829, Tmax = 0.950 | Rint = 0.026 |
20122 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.089 | All H-atom parameters refined |
S = 1.04 | Δρmax = 0.53 e Å−3 |
4863 reflections | Δρmin = −0.37 e Å−3 |
225 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.32221 (2) | 0.130087 (19) | 0.89383 (4) | 0.02300 (7) | |
S1 | 0.150384 (18) | 0.591224 (17) | 0.98106 (3) | 0.01312 (6) | |
O1 | 0.19845 (6) | 0.64388 (6) | 0.86316 (9) | 0.01714 (14) | |
O2 | 0.03978 (6) | 0.60773 (6) | 0.97922 (10) | 0.01793 (14) | |
O3 | 0.15020 (6) | 0.26617 (6) | 0.97198 (9) | 0.01711 (14) | |
N1 | 0.40417 (8) | 0.62924 (7) | 1.67597 (11) | 0.02030 (18) | |
N2 | 0.15327 (7) | 0.46898 (6) | 0.94120 (11) | 0.01577 (15) | |
N3 | 0.32756 (7) | 0.46232 (7) | 0.89578 (12) | 0.01792 (16) | |
N4 | 0.40819 (7) | 0.30443 (7) | 0.86117 (13) | 0.01997 (17) | |
C1 | 0.32974 (8) | 0.63720 (7) | 1.21150 (12) | 0.01551 (17) | |
C2 | 0.38928 (8) | 0.64543 (8) | 1.37493 (13) | 0.01691 (17) | |
C3 | 0.34401 (8) | 0.62413 (7) | 1.51452 (12) | 0.01546 (17) | |
C4 | 0.23638 (8) | 0.59518 (8) | 1.48550 (13) | 0.01756 (18) | |
C5 | 0.17708 (8) | 0.58676 (8) | 1.32262 (13) | 0.01685 (18) | |
C6 | 0.22376 (7) | 0.60750 (7) | 1.18497 (12) | 0.01355 (16) | |
C7 | 0.24116 (7) | 0.41496 (7) | 0.92115 (12) | 0.01407 (16) | |
C8 | 0.23504 (7) | 0.30973 (7) | 0.92579 (12) | 0.01413 (16) | |
C9 | 0.32214 (8) | 0.25928 (7) | 0.89322 (12) | 0.01631 (17) | |
C10 | 0.40614 (8) | 0.40413 (8) | 0.86664 (15) | 0.0207 (2) | |
C11 | 0.07329 (9) | 0.21978 (10) | 0.83669 (16) | 0.0253 (2) | |
H1A | 0.3591 (13) | 0.6546 (12) | 1.120 (2) | 0.025 (4)* | |
H2A | 0.4615 (13) | 0.6672 (13) | 1.393 (2) | 0.027 (4)* | |
H4A | 0.2078 (13) | 0.5806 (12) | 1.581 (2) | 0.027 (4)* | |
H5A | 0.1038 (13) | 0.5624 (12) | 1.303 (2) | 0.026 (4)* | |
H10A | 0.4693 (14) | 0.4379 (13) | 0.847 (2) | 0.030 (4)* | |
H11A | 0.0146 (14) | 0.2042 (14) | 0.883 (2) | 0.035 (4)* | |
H11B | 0.0532 (14) | 0.2688 (14) | 0.743 (2) | 0.038 (5)* | |
H11C | 0.0991 (15) | 0.1654 (16) | 0.795 (2) | 0.043 (5)* | |
H1N1 | 0.4646 (14) | 0.6617 (14) | 1.695 (2) | 0.033 (4)* | |
H2N1 | 0.3696 (15) | 0.6271 (14) | 1.759 (2) | 0.034 (5)* | |
H1N2 | 0.1012 (14) | 0.4342 (13) | 0.968 (2) | 0.030 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.02251 (13) | 0.01320 (11) | 0.03324 (15) | 0.00115 (8) | 0.00591 (10) | −0.00126 (9) |
S1 | 0.01184 (10) | 0.01368 (11) | 0.01457 (11) | 0.00149 (7) | 0.00442 (8) | 0.00027 (7) |
O1 | 0.0191 (3) | 0.0179 (3) | 0.0156 (3) | 0.0009 (3) | 0.0064 (3) | 0.0026 (2) |
O2 | 0.0121 (3) | 0.0195 (3) | 0.0228 (3) | 0.0032 (2) | 0.0050 (3) | 0.0005 (3) |
O3 | 0.0161 (3) | 0.0188 (3) | 0.0177 (3) | −0.0056 (3) | 0.0064 (3) | −0.0027 (3) |
N1 | 0.0241 (4) | 0.0228 (4) | 0.0140 (4) | −0.0020 (3) | 0.0041 (3) | −0.0002 (3) |
N2 | 0.0129 (3) | 0.0139 (3) | 0.0220 (4) | −0.0005 (3) | 0.0071 (3) | −0.0028 (3) |
N3 | 0.0143 (4) | 0.0154 (4) | 0.0260 (4) | 0.0000 (3) | 0.0085 (3) | −0.0005 (3) |
N4 | 0.0161 (4) | 0.0172 (4) | 0.0285 (4) | 0.0019 (3) | 0.0091 (3) | 0.0003 (3) |
C1 | 0.0155 (4) | 0.0164 (4) | 0.0160 (4) | −0.0008 (3) | 0.0063 (3) | 0.0003 (3) |
C2 | 0.0159 (4) | 0.0189 (4) | 0.0167 (4) | −0.0015 (3) | 0.0053 (3) | 0.0000 (3) |
C3 | 0.0191 (4) | 0.0130 (4) | 0.0148 (4) | 0.0011 (3) | 0.0049 (3) | −0.0002 (3) |
C4 | 0.0202 (4) | 0.0185 (4) | 0.0161 (4) | −0.0004 (3) | 0.0087 (3) | 0.0009 (3) |
C5 | 0.0157 (4) | 0.0188 (4) | 0.0178 (4) | −0.0007 (3) | 0.0076 (3) | 0.0008 (3) |
C6 | 0.0135 (4) | 0.0136 (4) | 0.0145 (4) | 0.0006 (3) | 0.0049 (3) | 0.0000 (3) |
C7 | 0.0123 (4) | 0.0149 (4) | 0.0154 (4) | 0.0003 (3) | 0.0041 (3) | −0.0017 (3) |
C8 | 0.0137 (4) | 0.0148 (4) | 0.0144 (4) | −0.0013 (3) | 0.0041 (3) | −0.0010 (3) |
C9 | 0.0167 (4) | 0.0135 (4) | 0.0189 (4) | 0.0011 (3) | 0.0042 (3) | −0.0011 (3) |
C10 | 0.0153 (4) | 0.0180 (4) | 0.0313 (5) | 0.0004 (3) | 0.0103 (4) | −0.0002 (4) |
C11 | 0.0196 (5) | 0.0299 (6) | 0.0268 (5) | −0.0086 (4) | 0.0058 (4) | −0.0109 (4) |
Cl1—C9 | 1.7255 (10) | C1—C2 | 1.3826 (14) |
S1—O1 | 1.4283 (7) | C1—C6 | 1.3932 (13) |
S1—O2 | 1.4383 (7) | C1—H1A | 0.931 (16) |
S1—N2 | 1.6662 (9) | C2—C3 | 1.4063 (13) |
S1—C6 | 1.7292 (10) | C2—H2A | 0.955 (17) |
O3—C8 | 1.3590 (11) | C3—C4 | 1.4094 (14) |
O3—C11 | 1.4480 (13) | C4—C5 | 1.3781 (15) |
N1—C3 | 1.3694 (13) | C4—H4A | 0.941 (17) |
N1—H1N1 | 0.875 (18) | C5—C6 | 1.4016 (13) |
N1—H2N1 | 0.879 (19) | C5—H5A | 0.979 (16) |
N2—C7 | 1.3809 (12) | C7—C8 | 1.4085 (14) |
N2—H1N2 | 0.880 (18) | C8—C9 | 1.3816 (13) |
N3—C7 | 1.3336 (12) | C10—H10A | 0.973 (17) |
N3—C10 | 1.3364 (13) | C11—H11A | 0.938 (18) |
N4—C10 | 1.3328 (14) | C11—H11B | 0.991 (19) |
N4—C9 | 1.3351 (13) | C11—H11C | 0.90 (2) |
O1—S1—O2 | 119.20 (5) | C3—C4—H4A | 117.7 (10) |
O1—S1—N2 | 108.81 (4) | C4—C5—C6 | 119.92 (9) |
O2—S1—N2 | 102.20 (4) | C4—C5—H5A | 119.9 (10) |
O1—S1—C6 | 110.38 (5) | C6—C5—H5A | 120.1 (10) |
O2—S1—C6 | 109.14 (5) | C1—C6—C5 | 120.47 (9) |
N2—S1—C6 | 106.10 (5) | C1—C6—S1 | 119.96 (7) |
C8—O3—C11 | 115.81 (8) | C5—C6—S1 | 119.52 (8) |
C3—N1—H1N1 | 119.3 (12) | N3—C7—N2 | 120.16 (9) |
C3—N1—H2N1 | 116.6 (12) | N3—C7—C8 | 122.05 (9) |
H1N1—N1—H2N1 | 117.5 (17) | N2—C7—C8 | 117.78 (8) |
C7—N2—S1 | 125.98 (7) | O3—C8—C9 | 125.25 (9) |
C7—N2—H1N2 | 116.1 (11) | O3—C8—C7 | 119.17 (8) |
S1—N2—H1N2 | 114.8 (11) | C9—C8—C7 | 115.41 (9) |
C7—N3—C10 | 116.09 (9) | N4—C9—C8 | 123.96 (9) |
C10—N4—C9 | 114.94 (9) | N4—C9—Cl1 | 116.89 (7) |
C2—C1—C6 | 119.60 (9) | C8—C9—Cl1 | 119.15 (8) |
C2—C1—H1A | 120.2 (10) | N4—C10—N3 | 127.44 (10) |
C6—C1—H1A | 120.1 (10) | N4—C10—H10A | 115.8 (10) |
C1—C2—C3 | 120.71 (9) | N3—C10—H10A | 116.8 (10) |
C1—C2—H2A | 119.7 (10) | O3—C11—H11A | 105.7 (11) |
C3—C2—H2A | 119.6 (10) | O3—C11—H11B | 108.5 (11) |
N1—C3—C2 | 120.53 (9) | H11A—C11—H11B | 110.6 (15) |
N1—C3—C4 | 120.49 (9) | O3—C11—H11C | 112.6 (12) |
C2—C3—C4 | 118.96 (9) | H11A—C11—H11C | 111.6 (17) |
C5—C4—C3 | 120.34 (9) | H11B—C11—H11C | 107.8 (16) |
C5—C4—H4A | 122.0 (10) | ||
O1—S1—N2—C7 | 49.81 (10) | C10—N3—C7—N2 | −175.76 (10) |
O2—S1—N2—C7 | 176.75 (8) | C10—N3—C7—C8 | 3.19 (15) |
C6—S1—N2—C7 | −68.95 (9) | S1—N2—C7—N3 | −14.89 (14) |
C6—C1—C2—C3 | 0.01 (15) | S1—N2—C7—C8 | 166.11 (7) |
C1—C2—C3—N1 | 177.89 (10) | C11—O3—C8—C9 | −78.05 (13) |
C1—C2—C3—C4 | −0.66 (15) | C11—O3—C8—C7 | 106.84 (11) |
N1—C3—C4—C5 | −177.74 (10) | N3—C7—C8—O3 | 172.23 (9) |
C2—C3—C4—C5 | 0.80 (15) | N2—C7—C8—O3 | −8.80 (13) |
C3—C4—C5—C6 | −0.30 (15) | N3—C7—C8—C9 | −3.36 (14) |
C2—C1—C6—C5 | 0.51 (15) | N2—C7—C8—C9 | 175.62 (9) |
C2—C1—C6—S1 | −176.93 (8) | C10—N4—C9—C8 | 1.60 (15) |
C4—C5—C6—C1 | −0.37 (15) | C10—N4—C9—Cl1 | −178.19 (8) |
C4—C5—C6—S1 | 177.08 (8) | O3—C8—C9—N4 | −174.46 (10) |
O1—S1—C6—C1 | −20.24 (9) | C7—C8—C9—N4 | 0.82 (14) |
O2—S1—C6—C1 | −153.06 (8) | O3—C8—C9—Cl1 | 5.32 (14) |
N2—S1—C6—C1 | 97.49 (8) | C7—C8—C9—Cl1 | −179.40 (7) |
O1—S1—C6—C5 | 162.29 (8) | C9—N4—C10—N3 | −1.89 (18) |
O2—S1—C6—C5 | 29.47 (9) | C7—N3—C10—N4 | −0.47 (18) |
N2—S1—C6—C5 | −79.98 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···N4i | 0.875 (19) | 2.616 (18) | 3.4230 (14) | 153.8 (15) |
N1—H2N1···O1ii | 0.882 (18) | 2.533 (19) | 3.3274 (13) | 150.2 (15) |
N2—H1N2···O2iii | 0.880 (18) | 2.031 (18) | 2.8866 (12) | 163.7 (16) |
C4—H4A···O1ii | 0.944 (16) | 2.460 (16) | 3.2603 (13) | 142.5 (13) |
Symmetry codes: (i) −x+1, y+1/2, −z+5/2; (ii) x, y, z+1; (iii) −x, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C11H11ClN4O3S |
Mr | 314.75 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 12.8792 (6), 13.3557 (6), 8.0867 (4) |
β (°) | 102.396 (1) |
V (Å3) | 1358.57 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.45 |
Crystal size (mm) | 0.44 × 0.33 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART APEX DUO area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.829, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20122, 4863, 4292 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.756 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.089, 1.04 |
No. of reflections | 4863 |
No. of parameters | 225 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.53, −0.37 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···N4i | 0.875 (19) | 2.616 (18) | 3.4230 (14) | 153.8 (15) |
N1—H2N1···O1ii | 0.882 (18) | 2.533 (19) | 3.3274 (13) | 150.2 (15) |
N2—H1N2···O2iii | 0.880 (18) | 2.031 (18) | 2.8866 (12) | 163.7 (16) |
C4—H4A···O1ii | 0.944 (16) | 2.460 (16) | 3.2603 (13) | 142.5 (13) |
Symmetry codes: (i) −x+1, y+1/2, −z+5/2; (ii) x, y, z+1; (iii) −x, −y+1, −z+2. |
Acknowledgements
HKF and JHG thank Universiti Sains Malaysia (USM) for the Research University Golden Goose grant (No. 1001/PFIZIK/811012). JHG also thanks USM for the award of a USM fellowship. CSC thanks the University of Mysore for research facilities.
References
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The importance of pyrimidines and analogous compounds in pharmaceutical and biological fields is well known (Townsend et al., 2002). Some substituted pyrimidines and their derivaties have been reported to possess anti-microbial and anti-fungal activities (El-Hashash et al., 1993). Pyrimidines have incidental anti-viral activity against herpes and vaccinia infections (Calabresi et al., 1975). A review on pyrimidines as anti-inflammatory agent is described by Amir et al. (2007). Sulfonamides are an important class of anti-bacterial drugs used in medicine and veterinary practice. Sulfa drugs are widely used in the treatment of infections, especially for patients intolerant to antibiotics. The vast commercial success of these medicinal agents has made the chemistry of sulfonamides to become a major area of research and an important branch of commercial importance in pharmaceutical sciences (Nagaraja et al., 2003). In view of the importance of the title compound possessing potential anti-bacterial properties, its crystal structure is reported herein.
In the title sulfonamide compound (Fig. 1), the geometry around the S1 atom is a distorted tetrahedron, comprising of atoms O1 and O2 of the sulfonyl group, C6 atom of benzene ring and the amino atom N2. The O1–S1–O2 and O2–S1–N2 angles are 119.20 (5) and 102.20 (4)°, respectively, and the C6–S1–N2–C7 torsion angle is -68.95 (9)°. The pyrimidine ring is essentially planar, with r.m.s. deviation of -0.020 (1) Å, and is almost perpendicular to the benzene ring (C1-C6), as indicated by the dihedral angle of 87.57 (5)°. The bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to a related structure (Chohan et al., 2008). In the crystal structure, pairs of intermolecular N2—H1N2···O2iii hydrogen bonds (see Table 1 for symmetry code) generate R22(8) ring motifs (Bernstein et al., 1995). Neighbouring molecules are linked into a three-dimensional extended network by intermolecular N1—H1N1···N4, N1—H2N1···O1 and C4—H4A···O1 hydrogen bonds (Fig. 2).