organic compounds
4-[4-(3-Methoxybenzamido)phenoxy]-N-methylpicolinamide
aState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, West China Medical School, Sichuan University, Chengdu 610041, People's Republic of China, bKey Laboratory of Bio-resources and Eco-environment of the Ministry of Education, College of Life Science, Sichuan University, Chengdu 610041, People's Republic of China, and cDepartment of Pharmaceutical and Bioengineering, School of Chemical Engineering, Sichuan University, Chengdu 610065, People's Republic of China
*Correspondence e-mail: luodyu@163.com
In the title compound, C21H19N3O4, the central benzene ring makes dihedral angles of 78.54 (6) and 75.30 (6)° with the pyridine and 3-methoxyphenyl rings, respectively. An intramolecular N—H⋯N interaction occurs, generating an S(?). The crystal packing shows intermolecular N—H⋯O hydrogen-bonding interactions between the N—H groups and the O atoms of the 3-methoxyphenyl ring and the carbonyl groups of the amide functions. Intermolecular C—H⋯O interactions are also present.
Related literature
For related compounds and their biological activity, see: Khire et al. (2004); Dominguez et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536809055688/om2308sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536809055688/om2308Isup2.hkl
To the suspension of anhydrous potassium carbonate (1.635 g,12.5 mmol) and 4-(4-aminophenoxy)-N-methylpicolinamide (1.22 g, 5 mmol) in 11.4 ml THF was added dropwise 3-methoxybenzoyl chloride(1.28 g,7.5 mmol). After being stirred at room temperature for 2 h, the mixture was extracted with 90 ml EA and 30 ml water for three times and the combined organic layers were dried over anhydrous Na2SO4. Then the solution was concentrated under vacuum, and the residue was recrystallized from ethanol to give the title compound. Crystals suitable for X-ray analysis were obtained by slow evaporation from a solution of ethanol.
The two H atoms of N1 and N3 were located in a difference map and refined isotropically. The reminaing H atoms were positioned geometrically (C—H = 0.95–0.98 Å) and refined using a riding model, with Uiso(H) = 1.2–1.5Ueq(C). In the final stages of
Friedel-pair reflections were merged.Sorafenib is of great importance owing to its antitumor properties (Khire et al., 2004; Dominguez et al., 2007). The title compound, as one of its derivatives, possessed even better in vitro anticancer activity against both two tumor cell lines (HCT116 and HEPG2). As a potent antitumor drug, we report here its crystal structure.
In the title molecule, C21H19N3O4, (Fig.1), the phenyl ring makes dihedral angles of 78.54 (6)° and 75.30 (6)° with the pyridine ring and the 3-methoxyphenyl ring, respectively. In the
intermolecular N—H···O hydrogen-bonding interactions between the N—H and O atoms of 3-methoxyphenyl ring and carbonyl groups of the amide functionalities form an infinite three-dimensional structure (Table 1 and Fig. 2).For related compounds and their biological activity, see: Khire et al. (2004); Dominguez et al. (2007).
Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. The cell packing of the title compound. |
C21H19N3O4 | Z = 1 |
Mr = 377.39 | F(000) = 198 |
Triclinic, P1 | Dx = 1.386 Mg m−3 |
a = 5.0915 (10) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.3251 (17) Å | Cell parameters from 1652 reflections |
c = 11.611 (2) Å | θ = 2.7–27.8° |
α = 71.29 (3)° | µ = 0.10 mm−1 |
β = 87.74 (3)° | T = 113 K |
γ = 76.10 (3)° | Block, colourless |
V = 452.14 (16) Å3 | 0.34 × 0.29 × 0.19 mm |
Rigaku Saturn CCD area-detector diffractometer | 2108 independent reflections |
Radiation source: rotating anode | 1811 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.026 |
Detector resolution: 7.31 pixels mm-1 | θmax = 27.8°, θmin = 2.7° |
ω and φ scans | h = −6→4 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −10→10 |
Tmin = 0.968, Tmax = 0.982 | l = −14→15 |
3733 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: mixed |
wR(F2) = 0.085 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0481P)2] where P = (Fo2 + 2Fc2)/3 |
2108 reflections | (Δ/σ)max < 0.001 |
263 parameters | Δρmax = 0.22 e Å−3 |
3 restraints | Δρmin = −0.24 e Å−3 |
C21H19N3O4 | γ = 76.10 (3)° |
Mr = 377.39 | V = 452.14 (16) Å3 |
Triclinic, P1 | Z = 1 |
a = 5.0915 (10) Å | Mo Kα radiation |
b = 8.3251 (17) Å | µ = 0.10 mm−1 |
c = 11.611 (2) Å | T = 113 K |
α = 71.29 (3)° | 0.34 × 0.29 × 0.19 mm |
β = 87.74 (3)° |
Rigaku Saturn CCD area-detector diffractometer | 2108 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1811 reflections with I > 2σ(I) |
Tmin = 0.968, Tmax = 0.982 | Rint = 0.026 |
3733 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 3 restraints |
wR(F2) = 0.085 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.22 e Å−3 |
2108 reflections | Δρmin = −0.24 e Å−3 |
263 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | −0.3679 (3) | 1.5504 (2) | 0.23318 (15) | 0.0212 (4) | |
O2 | −0.1469 (3) | 0.9491 (2) | 0.56055 (17) | 0.0249 (4) | |
O3 | 0.4394 (3) | 0.1895 (2) | 0.81518 (15) | 0.0220 (4) | |
O4 | 1.1345 (3) | 0.2263 (2) | 1.10678 (16) | 0.0230 (4) | |
N1 | 0.3007 (3) | 0.9089 (2) | 0.60459 (17) | 0.0154 (4) | |
H1N | 0.443 (6) | 0.954 (4) | 0.579 (3) | 0.031 (8)* | |
N2 | 1.0377 (4) | −0.1617 (2) | 1.06587 (18) | 0.0197 (4) | |
N3 | 1.3326 (4) | −0.0601 (3) | 1.20340 (18) | 0.0202 (4) | |
H3N | 1.353 (6) | −0.166 (4) | 1.208 (3) | 0.025 (7)* | |
C1 | 0.0404 (4) | 1.1969 (3) | 0.48677 (19) | 0.0138 (4) | |
C2 | −0.1555 (4) | 1.2811 (3) | 0.3920 (2) | 0.0157 (4) | |
H2 | −0.2683 | 1.2179 | 0.3713 | 0.019* | |
C3 | −0.1849 (4) | 1.4569 (3) | 0.3282 (2) | 0.0166 (5) | |
C4 | −0.0230 (4) | 1.5503 (3) | 0.3610 (2) | 0.0186 (5) | |
H4 | −0.0441 | 1.6711 | 0.3181 | 0.022* | |
C5 | 0.1675 (4) | 1.4670 (3) | 0.4559 (2) | 0.0196 (5) | |
H5 | 0.2754 | 1.5316 | 0.4784 | 0.024* | |
C6 | 0.2036 (4) | 1.2891 (3) | 0.5190 (2) | 0.0167 (5) | |
H6 | 0.3377 | 1.2318 | 0.5830 | 0.020* | |
C7 | −0.4855 (5) | 1.4516 (3) | 0.1769 (2) | 0.0240 (5) | |
H7A | −0.6035 | 1.3902 | 0.2340 | 0.036* | |
H7B | −0.3410 | 1.3663 | 0.1549 | 0.036* | |
H7C | −0.5919 | 1.5310 | 0.1034 | 0.036* | |
C8 | 0.0553 (4) | 1.0091 (3) | 0.5533 (2) | 0.0163 (4) | |
C9 | 0.3486 (4) | 0.7259 (3) | 0.66625 (19) | 0.0145 (4) | |
C10 | 0.5761 (4) | 0.6131 (3) | 0.6406 (2) | 0.0162 (4) | |
H10 | 0.7046 | 0.6589 | 0.5865 | 0.019* | |
C11 | 0.6152 (4) | 0.4336 (3) | 0.6942 (2) | 0.0190 (5) | |
H11 | 0.7689 | 0.3560 | 0.6763 | 0.023* | |
C12 | 0.4271 (4) | 0.3690 (3) | 0.7740 (2) | 0.0174 (5) | |
C13 | 0.2105 (4) | 0.4795 (3) | 0.8055 (2) | 0.0213 (5) | |
H13 | 0.0892 | 0.4336 | 0.8640 | 0.026* | |
C14 | 0.1710 (4) | 0.6586 (3) | 0.7512 (2) | 0.0204 (5) | |
H14 | 0.0215 | 0.7356 | 0.7723 | 0.025* | |
C15 | 0.6403 (4) | 0.0792 (3) | 0.8978 (2) | 0.0169 (5) | |
C16 | 0.6760 (5) | −0.0977 (3) | 0.9182 (2) | 0.0194 (5) | |
H16 | 0.5661 | −0.1394 | 0.8757 | 0.023* | |
C17 | 0.8763 (5) | −0.2126 (3) | 1.0024 (2) | 0.0210 (5) | |
H17 | 0.9012 | −0.3341 | 1.0161 | 0.025* | |
C18 | 0.9936 (4) | 0.0107 (3) | 1.0450 (2) | 0.0163 (4) | |
C19 | 0.8000 (4) | 0.1369 (3) | 0.9625 (2) | 0.0161 (4) | |
H19 | 0.7777 | 0.2578 | 0.9509 | 0.019* | |
C20 | 1.1623 (4) | 0.0692 (3) | 1.1206 (2) | 0.0172 (5) | |
C21 | 1.4960 (5) | −0.0250 (3) | 1.2878 (2) | 0.0220 (5) | |
H21A | 1.3916 | 0.0733 | 1.3122 | 0.033* | |
H21B | 1.6598 | 0.0043 | 1.2484 | 0.033* | |
H21C | 1.5470 | −0.1288 | 1.3599 | 0.033* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0201 (8) | 0.0162 (9) | 0.0232 (9) | −0.0018 (6) | −0.0079 (6) | −0.0016 (7) |
O2 | 0.0138 (7) | 0.0175 (8) | 0.0376 (10) | −0.0063 (6) | −0.0052 (7) | 0.0017 (7) |
O3 | 0.0228 (8) | 0.0134 (8) | 0.0260 (9) | −0.0053 (6) | −0.0103 (7) | 0.0010 (7) |
O4 | 0.0243 (8) | 0.0170 (9) | 0.0262 (9) | −0.0024 (6) | −0.0048 (7) | −0.0060 (7) |
N1 | 0.0118 (8) | 0.0135 (9) | 0.0184 (9) | −0.0030 (7) | 0.0003 (7) | −0.0017 (8) |
N2 | 0.0229 (10) | 0.0139 (10) | 0.0209 (10) | −0.0021 (7) | −0.0008 (8) | −0.0053 (8) |
N3 | 0.0245 (10) | 0.0165 (11) | 0.0183 (10) | −0.0019 (8) | −0.0045 (8) | −0.0054 (8) |
C1 | 0.0115 (9) | 0.0125 (10) | 0.0163 (11) | −0.0010 (7) | 0.0023 (8) | −0.0047 (8) |
C2 | 0.0125 (9) | 0.0155 (11) | 0.0195 (11) | −0.0034 (8) | 0.0000 (8) | −0.0059 (9) |
C3 | 0.0138 (10) | 0.0149 (11) | 0.0180 (11) | −0.0004 (8) | −0.0001 (8) | −0.0032 (9) |
C4 | 0.0187 (11) | 0.0121 (11) | 0.0227 (12) | −0.0029 (8) | 0.0017 (9) | −0.0032 (9) |
C5 | 0.0179 (11) | 0.0174 (12) | 0.0260 (13) | −0.0069 (8) | 0.0007 (9) | −0.0085 (10) |
C6 | 0.0136 (10) | 0.0171 (12) | 0.0189 (11) | −0.0029 (8) | −0.0014 (8) | −0.0056 (9) |
C7 | 0.0237 (12) | 0.0198 (12) | 0.0272 (12) | 0.0009 (9) | −0.0095 (10) | −0.0088 (10) |
C8 | 0.0139 (10) | 0.0159 (11) | 0.0174 (11) | −0.0024 (8) | 0.0000 (8) | −0.0038 (9) |
C9 | 0.0134 (9) | 0.0137 (11) | 0.0142 (10) | −0.0016 (8) | −0.0038 (8) | −0.0021 (8) |
C10 | 0.0129 (10) | 0.0169 (11) | 0.0179 (11) | −0.0037 (8) | 0.0012 (8) | −0.0043 (9) |
C11 | 0.0168 (10) | 0.0166 (11) | 0.0217 (11) | −0.0005 (8) | −0.0025 (9) | −0.0057 (9) |
C12 | 0.0200 (11) | 0.0130 (11) | 0.0164 (11) | −0.0055 (8) | −0.0073 (9) | 0.0010 (9) |
C13 | 0.0188 (11) | 0.0206 (12) | 0.0206 (12) | −0.0061 (8) | 0.0018 (9) | −0.0006 (9) |
C14 | 0.0177 (11) | 0.0209 (12) | 0.0185 (11) | −0.0017 (8) | 0.0027 (8) | −0.0031 (9) |
C15 | 0.0168 (10) | 0.0147 (11) | 0.0146 (11) | −0.0018 (8) | −0.0010 (8) | 0.0002 (9) |
C16 | 0.0229 (11) | 0.0179 (12) | 0.0190 (11) | −0.0069 (9) | 0.0001 (8) | −0.0064 (9) |
C17 | 0.0276 (12) | 0.0116 (10) | 0.0220 (12) | −0.0034 (8) | 0.0005 (9) | −0.0040 (9) |
C18 | 0.0182 (11) | 0.0152 (11) | 0.0143 (10) | −0.0053 (8) | 0.0034 (8) | −0.0027 (9) |
C19 | 0.0189 (10) | 0.0131 (10) | 0.0147 (10) | −0.0043 (8) | 0.0014 (8) | −0.0021 (9) |
C20 | 0.0155 (10) | 0.0195 (12) | 0.0162 (11) | −0.0034 (8) | 0.0022 (8) | −0.0060 (9) |
C21 | 0.0206 (11) | 0.0253 (13) | 0.0203 (11) | −0.0024 (9) | −0.0031 (9) | −0.0091 (10) |
O1—C3 | 1.369 (3) | C7—H7A | 0.9800 |
O1—C7 | 1.440 (3) | C7—H7B | 0.9800 |
O2—C8 | 1.237 (3) | C7—H7C | 0.9800 |
O3—C15 | 1.368 (3) | C9—C14 | 1.387 (3) |
O3—C12 | 1.402 (3) | C9—C10 | 1.394 (3) |
O4—C20 | 1.239 (3) | C10—C11 | 1.389 (3) |
N1—C8 | 1.360 (3) | C10—H10 | 0.9500 |
N1—C9 | 1.424 (3) | C11—C12 | 1.387 (3) |
N1—H1N | 0.89 (3) | C11—H11 | 0.9500 |
N2—C18 | 1.340 (3) | C12—C13 | 1.376 (3) |
N2—C17 | 1.346 (3) | C13—C14 | 1.387 (3) |
N3—C20 | 1.337 (3) | C13—H13 | 0.9500 |
N3—C21 | 1.450 (3) | C14—H14 | 0.9500 |
N3—H3N | 0.85 (3) | C15—C16 | 1.382 (3) |
C1—C6 | 1.391 (3) | C15—C19 | 1.387 (3) |
C1—C2 | 1.397 (3) | C16—C17 | 1.386 (3) |
C1—C8 | 1.491 (3) | C16—H16 | 0.9500 |
C2—C3 | 1.386 (3) | C17—H17 | 0.9500 |
C2—H2 | 0.9500 | C18—C19 | 1.387 (3) |
C3—C4 | 1.397 (3) | C18—C20 | 1.510 (3) |
C4—C5 | 1.380 (3) | C19—H19 | 0.9500 |
C4—H4 | 0.9500 | C21—H21A | 0.9800 |
C5—C6 | 1.396 (3) | C21—H21B | 0.9800 |
C5—H5 | 0.9500 | C21—H21C | 0.9800 |
C6—H6 | 0.9500 | ||
C3—O1—C7 | 116.81 (17) | C11—C10—C9 | 120.1 (2) |
C15—O3—C12 | 119.17 (17) | C11—C10—H10 | 120.0 |
C8—N1—C9 | 122.98 (18) | C9—C10—H10 | 120.0 |
C8—N1—H1N | 116 (2) | C12—C11—C10 | 119.2 (2) |
C9—N1—H1N | 118 (2) | C12—C11—H11 | 120.4 |
C18—N2—C17 | 116.25 (18) | C10—C11—H11 | 120.4 |
C20—N3—C21 | 121.4 (2) | C13—C12—C11 | 121.2 (2) |
C20—N3—H3N | 122 (2) | C13—C12—O3 | 118.26 (19) |
C21—N3—H3N | 117 (2) | C11—C12—O3 | 120.3 (2) |
C6—C1—C2 | 120.42 (19) | C12—C13—C14 | 119.4 (2) |
C6—C1—C8 | 122.61 (19) | C12—C13—H13 | 120.3 |
C2—C1—C8 | 116.91 (19) | C14—C13—H13 | 120.3 |
C3—C2—C1 | 119.96 (19) | C13—C14—C9 | 120.4 (2) |
C3—C2—H2 | 120.0 | C13—C14—H14 | 119.8 |
C1—C2—H2 | 120.0 | C9—C14—H14 | 119.8 |
O1—C3—C2 | 124.4 (2) | O3—C15—C16 | 116.9 (2) |
O1—C3—C4 | 115.84 (19) | O3—C15—C19 | 123.2 (2) |
C2—C3—C4 | 119.77 (19) | C16—C15—C19 | 119.86 (19) |
C5—C4—C3 | 120.0 (2) | C15—C16—C17 | 118.2 (2) |
C5—C4—H4 | 120.0 | C15—C16—H16 | 120.9 |
C3—C4—H4 | 120.0 | C17—C16—H16 | 120.9 |
C4—C5—C6 | 120.8 (2) | N2—C17—C16 | 123.7 (2) |
C4—C5—H5 | 119.6 | N2—C17—H17 | 118.1 |
C6—C5—H5 | 119.6 | C16—C17—H17 | 118.1 |
C1—C6—C5 | 119.04 (19) | N2—C18—C19 | 124.8 (2) |
C1—C6—H6 | 120.5 | N2—C18—C20 | 116.87 (18) |
C5—C6—H6 | 120.5 | C19—C18—C20 | 118.32 (19) |
O1—C7—H7A | 109.5 | C18—C19—C15 | 117.2 (2) |
O1—C7—H7B | 109.5 | C18—C19—H19 | 121.4 |
H7A—C7—H7B | 109.5 | C15—C19—H19 | 121.4 |
O1—C7—H7C | 109.5 | O4—C20—N3 | 124.1 (2) |
H7A—C7—H7C | 109.5 | O4—C20—C18 | 120.93 (19) |
H7B—C7—H7C | 109.5 | N3—C20—C18 | 115.0 (2) |
O2—C8—N1 | 122.4 (2) | N3—C21—H21A | 109.5 |
O2—C8—C1 | 120.97 (19) | N3—C21—H21B | 109.5 |
N1—C8—C1 | 116.65 (19) | H21A—C21—H21B | 109.5 |
C14—C9—C10 | 119.6 (2) | N3—C21—H21C | 109.5 |
C14—C9—N1 | 120.77 (18) | H21A—C21—H21C | 109.5 |
C10—C9—N1 | 119.64 (19) | H21B—C21—H21C | 109.5 |
C6—C1—C2—C3 | 1.0 (3) | C15—O3—C12—C13 | −113.2 (2) |
C8—C1—C2—C3 | 178.42 (18) | C15—O3—C12—C11 | 72.9 (3) |
C7—O1—C3—C2 | −16.6 (3) | C11—C12—C13—C14 | 3.7 (3) |
C7—O1—C3—C4 | 164.13 (19) | O3—C12—C13—C14 | −170.2 (2) |
C1—C2—C3—O1 | 179.13 (19) | C12—C13—C14—C9 | −0.3 (3) |
C1—C2—C3—C4 | −1.6 (3) | C10—C9—C14—C13 | −3.6 (3) |
O1—C3—C4—C5 | −180.0 (2) | N1—C9—C14—C13 | 176.2 (2) |
C2—C3—C4—C5 | 0.7 (3) | C12—O3—C15—C16 | −168.06 (19) |
C3—C4—C5—C6 | 0.8 (3) | C12—O3—C15—C19 | 13.8 (3) |
C2—C1—C6—C5 | 0.5 (3) | O3—C15—C16—C17 | −179.4 (2) |
C8—C1—C6—C5 | −176.77 (19) | C19—C15—C16—C17 | −1.1 (3) |
C4—C5—C6—C1 | −1.4 (3) | C18—N2—C17—C16 | 0.8 (3) |
C9—N1—C8—O2 | 2.7 (3) | C15—C16—C17—N2 | 0.3 (4) |
C9—N1—C8—C1 | −177.13 (19) | C17—N2—C18—C19 | −1.2 (3) |
C6—C1—C8—O2 | 149.6 (2) | C17—N2—C18—C20 | 176.7 (2) |
C2—C1—C8—O2 | −27.7 (3) | N2—C18—C19—C15 | 0.3 (3) |
C6—C1—C8—N1 | −30.6 (3) | C20—C18—C19—C15 | −177.45 (19) |
C2—C1—C8—N1 | 152.10 (19) | O3—C15—C19—C18 | 178.95 (19) |
C8—N1—C9—C14 | −46.8 (3) | C16—C15—C19—C18 | 0.8 (3) |
C8—N1—C9—C10 | 133.0 (2) | C21—N3—C20—O4 | 1.9 (3) |
C14—C9—C10—C11 | 4.1 (3) | C21—N3—C20—C18 | −176.19 (19) |
N1—C9—C10—C11 | −175.67 (19) | N2—C18—C20—O4 | 179.9 (2) |
C9—C10—C11—C12 | −0.7 (3) | C19—C18—C20—O4 | −2.2 (3) |
C10—C11—C12—C13 | −3.2 (3) | N2—C18—C20—N3 | −2.0 (3) |
C10—C11—C12—O3 | 170.56 (18) | C19—C18—C20—N3 | 175.94 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O2i | 0.89 (3) | 2.08 (3) | 2.918 (2) | 155 (3) |
N3—H3N···O1ii | 0.85 (3) | 2.38 (3) | 3.148 (3) | 151 (2) |
N3—H3N···N2 | 0.85 (3) | 2.33 (3) | 2.681 (3) | 105 (2) |
C7—H7B···O4iii | 0.98 | 2.55 | 3.475 (3) | 158 |
C14—H14···O2 | 0.95 | 2.56 | 2.887 (3) | 100 |
Symmetry codes: (i) x+1, y, z; (ii) x+2, y−2, z+1; (iii) x−1, y+1, z−1. |
Experimental details
Crystal data | |
Chemical formula | C21H19N3O4 |
Mr | 377.39 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 113 |
a, b, c (Å) | 5.0915 (10), 8.3251 (17), 11.611 (2) |
α, β, γ (°) | 71.29 (3), 87.74 (3), 76.10 (3) |
V (Å3) | 452.14 (16) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.34 × 0.29 × 0.19 |
Data collection | |
Diffractometer | Rigaku Saturn CCD area-detector |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.968, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3733, 2108, 1811 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.657 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.085, 1.10 |
No. of reflections | 2108 |
No. of parameters | 263 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.22, −0.24 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O2i | 0.89 (3) | 2.08 (3) | 2.918 (2) | 155 (3) |
N3—H3N···O1ii | 0.85 (3) | 2.38 (3) | 3.148 (3) | 151 (2) |
N3—H3N···N2 | 0.85 (3) | 2.33 (3) | 2.681 (3) | 105 (2) |
C7—H7B···O4iii | 0.98 | 2.55 | 3.475 (3) | 158.0 |
C14—H14···O2 | 0.95 | 2.56 | 2.887 (3) | 100.2 |
Symmetry codes: (i) x+1, y, z; (ii) x+2, y−2, z+1; (iii) x−1, y+1, z−1. |
Acknowledgements
The project was sponsored by the Scientific Research Foundation for Returned Overseas Chinese Scholars (No. 20071108–18–14), State Education Ministry. We thank the Analytical and Testing Center of Sichuan University for the X-ray measurements.
References
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Dominguez, C., Smith, L., Huang, Q., Yuan, C. & Ouyang, X. H. (2007). Bioorg. Med. Chem. Lett. 17, 6003–6008. Web of Science CrossRef PubMed CAS Google Scholar
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Khire, U. R., Bankston, D., Barbosa, J., Brittelli, D. R. & Caringal, Y. (2004). Bioorg. Med. Chem. Lett. 14, 783–786. Web of Science CrossRef PubMed CAS Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Sorafenib is of great importance owing to its antitumor properties (Khire et al., 2004; Dominguez et al., 2007). The title compound, as one of its derivatives, possessed even better in vitro anticancer activity against both two tumor cell lines (HCT116 and HEPG2). As a potent antitumor drug, we report here its crystal structure.
In the title molecule, C21H19N3O4, (Fig.1), the phenyl ring makes dihedral angles of 78.54 (6)° and 75.30 (6)° with the pyridine ring and the 3-methoxyphenyl ring, respectively. In the crystal structure, intermolecular N—H···O hydrogen-bonding interactions between the N—H and O atoms of 3-methoxyphenyl ring and carbonyl groups of the amide functionalities form an infinite three-dimensional structure (Table 1 and Fig. 2).