organic compounds
2,9-Bis(trichloromethyl)-1,10-phenanthroline1
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and cDepartment of Chemistry, Bengal Engineering and Science University, Shibpur, Howrah 711 103, India
*Correspondence e-mail: hkfun@usm.my
The 14H6Cl6N2, contains two crystallographically independent molecules, each of which is slightly twisted from planarity. The dihedral angles between the central ring and the two outer rings are 3.81 (7) and 4.30 (7)° in one molecule, and 4.13 (8) and 4.10 (7)° in the other. In the molecules are interlinked by C—Cl⋯Cl interactions into sheets parallel to the ac plane. These sheets are stacked along the b axis in such a way that the molecules are antiparallel; they are further connected into a supramolecular network. There are no classical hydrogen bonds. C⋯Cl [3.637 (2) Å], Cl⋯Cl [3.5639 (5)–3.6807 (8) Å] and Cl⋯N [3.3802 (15)–3.4093 (15) Å] short contacts and π–π interactions, with centroid–centroid distances in the range 3.5868 (9)–3.7844 (9) Å, are observed.
of the title compound, CRelated literature
For reference bond-length data, see: Allen et al. (1987). For background to and applications of 1,10-phenanthroline derivatives, see: Armaroli et al. 1992); Beer et al. (1993); Emmerling et al. (2007); Goswami et al. (2007); Wesselinova et al. (2009). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810002035/wn2373sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810002035/wn2373Isup2.hkl
A mixture of N-chlorosuccinimide (500 mg, 4.5 mmol) and triphenylphosphine (500 mg, 4.2 mmol) was moistened with CCl4 (60 ml) in a round bottom flask and stirred at room temperature for 25 min. A solution of 2,9-dimethyl-1,10-phenanthroline (1 g, 5.2 mmol) was added to the suspension and the reaction mixture was stirred and heated under reflux for 7 h. The solution was cooled and filtered. The evaporated filtrate was washed with saturated aqueous Na2CO3 and extracted repeatedly with CHCl3. Drying over anhydrous Na2SO4 was carried out, and the solvent was removed under reduced pressure. The crude product was purified with SiO2
(eluted with 1% ethyl acetate in petroleum ether) to give the title compound as a white crystalline solid. Colorless plate-shaped single crystals suitable for X-ray were recrystalized from CH2Cl2:hexane (1:10, v/v) by slow evaporation of the solvent at room temperature over the course of a week.Trichloromethyl-substituted π interactions contribute to the formation of specific motifs (Emmerling et al., 2007). The title compound was synthesized in order to study its supramolecular structure.
are of great importance due to their broad spectrum of biological activities. 2,9-Bis(trichloromethyl)-1,10-phenanthroline is used as a potentially robust ligand for metal oxidation catalysts (Beer et al., 1993). 1,10-phenanthroline derivatives also show antitumor (Wesselinova et al., 2009) as well as luminescence properties (Armaroli et al., 1992). Recently a series of trichloromethyl-substituted has been synthesized (Goswami et al., 2007) in good yield using N-chlorosuccinimide (NCS) and triphenylphosphine (PPh3) in carbon tetrachloride. In supramolecular chemistry it is known that the self-association of individual molecules can lead to the formation of highly complex and fascinating supramolecular aggregates if halogen···The
(Fig. 1) contains two molecules, A and B, having slight differences in bond lengths and angles. The 1,10-phenanthroline unit is not strictly planar, with dihedral angles between the central ring and the C1–C4/C12/N1 and C7–C11/N2 rings of 3.81 (7) and 4.30 (7)°, respectively, for molecule A [the corresponding values for molecule B are 4.13 (8) and 4.10 (7)° ]. In both molecules, A and B, none of the Cl atoms of the trichloromethyl substitutent is coplanar with the 1,10-phenanthroline ring system. The bond distances adopt normal values (Allen et al., 1987).In the π–π interactions are also observed, with distances of Cg1···Cg2i = 3.6610 (9) Å, Cg1···Cg2ii = 3.5868 (9) Å, Cg1···Cg3i = 3.7331 (10) Å, Cg2···Cg3ii = 3.7845 (9) Å, Cg4···Cg5iii = 3.5949 (9) Å, Cg4···Cg5iv = 3.6404 (9) Å, Cg4···Cg6iii = 3.7417 (10) Å and Cg5···Cg6iv = 3.7198 (9) Å (symmetry codes: (i) 1 - x, 1 - y, 1 - z; (ii) 1 - x, 2 - y, 1 - z; (iii) 2 - x, -y, 1 - z and (iv) 2 - x, 1 - y, 1 - z). Cg1, Cg2, Cg3, Cg4, Cg5 and Cg6 are the centroids of the rings C1A–C4A/C12A/N1A, C7A–C11A/N2A, C4A–C7A/C11A–C12A, C1B–C4B/C12B/N1B, C7B–C11B/N2B and C4B–C7B/C11B–C12B, respectively.
(Fig. 2), non-covalent interactions play a significant role in the three-dimensional supramolecular architecture, in which the molecules are interlinked into sheets parallel to the ac plane. These sheets are stacked along the b axis in such a way that the molecules are antiparallel. These sheets are further connected into a supramolecular network. There are no classical hydrogen bonds. However, C···Cl [3.637 (2) Å], Cl···Cl [3.5639 (5)–3.6807 (8) Å] and Cl···N [3.3802 (15)–3.4093 (15) Å] short contacts are present.For reference bond-length data, see: Allen et al. (1987). For background to and applications of 1,10-phenanthroline derivatives, see: Armaroli et al. 1992); (Beer et al. (1993); Emmerling et al. (2007); Goswami et al. (2007); Wesselinova et al. (2009). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C14H6Cl6N2 | F(000) = 1648 |
Mr = 414.91 | Dx = 1.783 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 13520 reflections |
a = 24.3001 (6) Å | θ = 0.9–35.0° |
b = 6.8825 (2) Å | µ = 1.11 mm−1 |
c = 20.3461 (5) Å | T = 100 K |
β = 114.689 (1)° | Plate, colorless |
V = 3091.74 (14) Å3 | 0.59 × 0.36 × 0.10 mm |
Z = 8 |
Bruker APEXII CCD area-detector diffractometer | 13520 independent reflections |
Radiation source: sealed tube | 9474 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.054 |
φ and ω scans | θmax = 35.0°, θmin = 0.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −34→39 |
Tmin = 0.561, Tmax = 0.898 | k = −11→11 |
63570 measured reflections | l = −32→32 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0401P)2 + 1.5309P] where P = (Fo2 + 2Fc2)/3 |
13520 reflections | (Δ/σ)max = 0.003 |
397 parameters | Δρmax = 0.60 e Å−3 |
0 restraints | Δρmin = −0.54 e Å−3 |
C14H6Cl6N2 | V = 3091.74 (14) Å3 |
Mr = 414.91 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 24.3001 (6) Å | µ = 1.11 mm−1 |
b = 6.8825 (2) Å | T = 100 K |
c = 20.3461 (5) Å | 0.59 × 0.36 × 0.10 mm |
β = 114.689 (1)° |
Bruker APEXII CCD area-detector diffractometer | 13520 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 9474 reflections with I > 2σ(I) |
Tmin = 0.561, Tmax = 0.898 | Rint = 0.054 |
63570 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.105 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.60 e Å−3 |
13520 reflections | Δρmin = −0.54 e Å−3 |
397 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1A | 0.334774 (19) | 0.88628 (7) | 0.25606 (2) | 0.02086 (9) | |
Cl2A | 0.242550 (19) | 0.81155 (7) | 0.30569 (2) | 0.02246 (9) | |
Cl3A | 0.301547 (19) | 0.49030 (6) | 0.26994 (2) | 0.01983 (9) | |
Cl4A | 0.55485 (2) | 0.64013 (8) | 0.29133 (3) | 0.02921 (11) | |
Cl5A | 0.679947 (19) | 0.72747 (7) | 0.37576 (2) | 0.02217 (9) | |
Cl6A | 0.59362 (2) | 1.03890 (7) | 0.31954 (3) | 0.02459 (10) | |
N1A | 0.41730 (6) | 0.7423 (2) | 0.39518 (8) | 0.0142 (3) | |
N2A | 0.53663 (6) | 0.7752 (2) | 0.41504 (8) | 0.0150 (3) | |
C1A | 0.36107 (7) | 0.7161 (2) | 0.38719 (9) | 0.0148 (3) | |
C2A | 0.34427 (8) | 0.6758 (3) | 0.44406 (9) | 0.0170 (3) | |
H2AA | 0.3041 | 0.6512 | 0.4352 | 0.020* | |
C3A | 0.38910 (8) | 0.6741 (3) | 0.51314 (10) | 0.0164 (3) | |
H3AA | 0.3795 | 0.6497 | 0.5521 | 0.020* | |
C4A | 0.44947 (7) | 0.7094 (2) | 0.52491 (9) | 0.0150 (3) | |
C5A | 0.49733 (8) | 0.7192 (2) | 0.59632 (9) | 0.0164 (3) | |
H5AA | 0.4888 | 0.6984 | 0.6363 | 0.020* | |
C6A | 0.55494 (8) | 0.7584 (2) | 0.60616 (9) | 0.0165 (3) | |
H6AA | 0.5852 | 0.7696 | 0.6528 | 0.020* | |
C7A | 0.56969 (7) | 0.7830 (2) | 0.54558 (9) | 0.0145 (3) | |
C8A | 0.62916 (7) | 0.8199 (2) | 0.55361 (9) | 0.0165 (3) | |
H8AA | 0.6601 | 0.8368 | 0.5995 | 0.020* | |
C9A | 0.64155 (8) | 0.8310 (3) | 0.49404 (10) | 0.0170 (3) | |
H9AA | 0.6805 | 0.8572 | 0.4985 | 0.020* | |
C10A | 0.59347 (7) | 0.8014 (2) | 0.42572 (9) | 0.0150 (3) | |
C11A | 0.52411 (7) | 0.7680 (2) | 0.47387 (9) | 0.0138 (3) | |
C12A | 0.46148 (7) | 0.7381 (2) | 0.46339 (9) | 0.0133 (3) | |
C13A | 0.31304 (7) | 0.7276 (2) | 0.30927 (9) | 0.0155 (3) | |
C14A | 0.60462 (7) | 0.8011 (3) | 0.35693 (9) | 0.0161 (3) | |
Cl1B | 0.83130 (2) | 0.36601 (7) | 0.57545 (3) | 0.02271 (9) | |
Cl2B | 0.74008 (2) | 0.25940 (8) | 0.43624 (3) | 0.02710 (11) | |
Cl3B | 0.807802 (19) | −0.03889 (6) | 0.53631 (2) | 0.02007 (9) | |
Cl4B | 1.05051 (2) | 0.13826 (8) | 0.76066 (2) | 0.02696 (11) | |
Cl5B | 1.177123 (19) | 0.19488 (7) | 0.80031 (2) | 0.02159 (9) | |
Cl6B | 1.09840 (2) | 0.52724 (7) | 0.77611 (2) | 0.02242 (9) | |
N1B | 0.91644 (6) | 0.2259 (2) | 0.52083 (8) | 0.0149 (3) | |
N2B | 1.03543 (6) | 0.2648 (2) | 0.62009 (8) | 0.0143 (3) | |
C1B | 0.86038 (7) | 0.1972 (2) | 0.47266 (9) | 0.0150 (3) | |
C2B | 0.84362 (8) | 0.1635 (3) | 0.39875 (9) | 0.0175 (3) | |
H2BA | 0.8037 | 0.1363 | 0.3676 | 0.021* | |
C3B | 0.88840 (8) | 0.1721 (3) | 0.37394 (9) | 0.0170 (3) | |
H3BA | 0.8789 | 0.1524 | 0.3252 | 0.020* | |
C4B | 0.94853 (7) | 0.2108 (2) | 0.42278 (9) | 0.0149 (3) | |
C5B | 0.99605 (8) | 0.2322 (2) | 0.39896 (9) | 0.0163 (3) | |
H5BA | 0.9876 | 0.2163 | 0.3503 | 0.020* | |
C6B | 1.05313 (8) | 0.2754 (3) | 0.44695 (10) | 0.0170 (3) | |
H6BA | 1.0831 | 0.2953 | 0.4305 | 0.020* | |
C7B | 1.06805 (7) | 0.2908 (2) | 0.52255 (9) | 0.0148 (3) | |
C8B | 1.12731 (8) | 0.3302 (2) | 0.57408 (10) | 0.0166 (3) | |
H8BA | 1.1580 | 0.3539 | 0.5591 | 0.020* | |
C9B | 1.13989 (8) | 0.3336 (3) | 0.64646 (10) | 0.0171 (3) | |
H9BA | 1.1786 | 0.3611 | 0.6811 | 0.021* | |
C10B | 1.09210 (7) | 0.2938 (2) | 0.66644 (9) | 0.0146 (3) | |
C11B | 1.02291 (7) | 0.2647 (2) | 0.54862 (9) | 0.0139 (3) | |
C12B | 0.96058 (7) | 0.2317 (2) | 0.49680 (9) | 0.0137 (3) | |
C13B | 0.81276 (7) | 0.1983 (3) | 0.50346 (9) | 0.0159 (3) | |
C14B | 1.10337 (7) | 0.2871 (3) | 0.74605 (9) | 0.0159 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.02068 (19) | 0.0238 (2) | 0.01618 (18) | −0.00383 (15) | 0.00582 (15) | 0.00361 (16) |
Cl2A | 0.01529 (18) | 0.0299 (2) | 0.0216 (2) | 0.00706 (15) | 0.00717 (16) | 0.00172 (17) |
Cl3A | 0.01796 (18) | 0.01901 (19) | 0.0200 (2) | −0.00169 (14) | 0.00547 (15) | −0.00399 (15) |
Cl4A | 0.0277 (2) | 0.0436 (3) | 0.0195 (2) | −0.0168 (2) | 0.01296 (18) | −0.0111 (2) |
Cl5A | 0.01725 (19) | 0.0279 (2) | 0.0222 (2) | 0.00705 (15) | 0.00910 (16) | 0.00110 (17) |
Cl6A | 0.0264 (2) | 0.0251 (2) | 0.0277 (2) | 0.00896 (17) | 0.01677 (19) | 0.01139 (18) |
N1A | 0.0136 (6) | 0.0136 (6) | 0.0153 (6) | 0.0006 (5) | 0.0059 (5) | 0.0001 (5) |
N2A | 0.0151 (6) | 0.0146 (6) | 0.0156 (6) | 0.0006 (5) | 0.0068 (5) | 0.0008 (5) |
C1A | 0.0141 (7) | 0.0134 (7) | 0.0159 (7) | 0.0004 (5) | 0.0054 (6) | −0.0016 (6) |
C2A | 0.0139 (7) | 0.0192 (8) | 0.0185 (8) | −0.0009 (6) | 0.0074 (6) | 0.0001 (6) |
C3A | 0.0185 (8) | 0.0171 (8) | 0.0165 (7) | 0.0004 (6) | 0.0101 (6) | 0.0003 (6) |
C4A | 0.0167 (7) | 0.0123 (7) | 0.0170 (7) | 0.0019 (5) | 0.0081 (6) | 0.0004 (6) |
C5A | 0.0198 (8) | 0.0158 (7) | 0.0136 (7) | 0.0021 (6) | 0.0071 (6) | 0.0005 (6) |
C6A | 0.0181 (8) | 0.0151 (7) | 0.0149 (7) | 0.0012 (6) | 0.0055 (6) | −0.0005 (6) |
C7A | 0.0149 (7) | 0.0126 (7) | 0.0156 (7) | 0.0003 (5) | 0.0058 (6) | 0.0007 (6) |
C8A | 0.0150 (7) | 0.0157 (7) | 0.0165 (7) | −0.0015 (5) | 0.0042 (6) | −0.0015 (6) |
C9A | 0.0145 (7) | 0.0179 (8) | 0.0183 (8) | −0.0027 (6) | 0.0065 (6) | −0.0001 (6) |
C10A | 0.0149 (7) | 0.0149 (7) | 0.0154 (7) | 0.0006 (5) | 0.0063 (6) | 0.0018 (6) |
C11A | 0.0136 (7) | 0.0129 (7) | 0.0148 (7) | 0.0010 (5) | 0.0057 (6) | 0.0005 (6) |
C12A | 0.0148 (7) | 0.0113 (7) | 0.0143 (7) | 0.0008 (5) | 0.0065 (6) | −0.0002 (6) |
C13A | 0.0136 (7) | 0.0162 (7) | 0.0171 (7) | −0.0001 (5) | 0.0070 (6) | −0.0006 (6) |
C14A | 0.0141 (7) | 0.0182 (8) | 0.0162 (7) | −0.0004 (5) | 0.0066 (6) | 0.0013 (6) |
Cl1B | 0.0236 (2) | 0.0236 (2) | 0.0259 (2) | −0.00425 (16) | 0.01529 (18) | −0.00761 (17) |
Cl2B | 0.01594 (19) | 0.0422 (3) | 0.0212 (2) | 0.01094 (18) | 0.00581 (16) | 0.0069 (2) |
Cl3B | 0.01827 (18) | 0.01960 (19) | 0.0235 (2) | −0.00159 (14) | 0.00980 (16) | 0.00239 (16) |
Cl4B | 0.0246 (2) | 0.0411 (3) | 0.0172 (2) | −0.01349 (19) | 0.01067 (17) | −0.00318 (19) |
Cl5B | 0.01830 (19) | 0.0254 (2) | 0.0204 (2) | 0.00703 (15) | 0.00734 (16) | 0.00478 (17) |
Cl6B | 0.0233 (2) | 0.0233 (2) | 0.01712 (19) | 0.00652 (15) | 0.00497 (16) | −0.00445 (16) |
N1B | 0.0153 (6) | 0.0140 (6) | 0.0156 (6) | 0.0010 (5) | 0.0067 (5) | 0.0008 (5) |
N2B | 0.0145 (6) | 0.0138 (6) | 0.0152 (6) | 0.0006 (5) | 0.0068 (5) | −0.0012 (5) |
C1B | 0.0150 (7) | 0.0141 (7) | 0.0160 (7) | 0.0011 (5) | 0.0066 (6) | 0.0013 (6) |
C2B | 0.0172 (8) | 0.0176 (8) | 0.0160 (7) | −0.0008 (6) | 0.0053 (6) | 0.0001 (6) |
C3B | 0.0204 (8) | 0.0161 (8) | 0.0139 (7) | 0.0008 (6) | 0.0064 (6) | −0.0006 (6) |
C4B | 0.0172 (7) | 0.0121 (7) | 0.0148 (7) | 0.0016 (5) | 0.0061 (6) | 0.0016 (6) |
C5B | 0.0208 (8) | 0.0166 (8) | 0.0138 (7) | 0.0020 (6) | 0.0095 (6) | 0.0021 (6) |
C6B | 0.0192 (8) | 0.0164 (8) | 0.0191 (8) | 0.0018 (6) | 0.0117 (7) | 0.0026 (6) |
C7B | 0.0157 (7) | 0.0118 (7) | 0.0177 (7) | 0.0005 (5) | 0.0077 (6) | 0.0002 (6) |
C8B | 0.0158 (7) | 0.0161 (7) | 0.0209 (8) | −0.0002 (5) | 0.0105 (6) | −0.0001 (6) |
C9B | 0.0150 (7) | 0.0173 (8) | 0.0187 (8) | −0.0016 (6) | 0.0068 (6) | −0.0020 (6) |
C10B | 0.0158 (7) | 0.0138 (7) | 0.0152 (7) | −0.0003 (5) | 0.0074 (6) | −0.0017 (6) |
C11B | 0.0158 (7) | 0.0111 (7) | 0.0160 (7) | 0.0005 (5) | 0.0078 (6) | −0.0003 (6) |
C12B | 0.0149 (7) | 0.0116 (7) | 0.0154 (7) | 0.0007 (5) | 0.0070 (6) | 0.0000 (6) |
C13B | 0.0127 (7) | 0.0174 (7) | 0.0161 (7) | 0.0008 (5) | 0.0045 (6) | 0.0010 (6) |
C14B | 0.0124 (7) | 0.0198 (8) | 0.0145 (7) | −0.0002 (5) | 0.0046 (6) | −0.0013 (6) |
Cl1A—C13A | 1.7667 (18) | Cl1B—C13B | 1.7690 (18) |
Cl2A—C13A | 1.7800 (17) | Cl2B—C13B | 1.7746 (17) |
Cl3A—C13A | 1.7887 (18) | Cl3B—C13B | 1.7870 (18) |
Cl4A—C14A | 1.7673 (18) | Cl4B—C14B | 1.7625 (18) |
Cl5A—C14A | 1.7800 (17) | Cl5B—C14B | 1.7834 (17) |
Cl6A—C14A | 1.7772 (18) | Cl6B—C14B | 1.7839 (18) |
N1A—C1A | 1.319 (2) | N1B—C1B | 1.319 (2) |
N1A—C12A | 1.354 (2) | N1B—C12B | 1.352 (2) |
N2A—C10A | 1.318 (2) | N2B—C10B | 1.319 (2) |
N2A—C11A | 1.353 (2) | N2B—C11B | 1.355 (2) |
C1A—C2A | 1.406 (2) | C1B—C2B | 1.403 (2) |
C1A—C13A | 1.529 (2) | C1B—C13B | 1.529 (2) |
C2A—C3A | 1.372 (2) | C2B—C3B | 1.379 (3) |
C2A—H2AA | 0.9300 | C2B—H2BA | 0.9300 |
C3A—C4A | 1.405 (2) | C3B—C4B | 1.408 (2) |
C3A—H3AA | 0.9300 | C3B—H3BA | 0.9300 |
C4A—C12A | 1.413 (2) | C4B—C12B | 1.416 (2) |
C4A—C5A | 1.434 (2) | C4B—C5B | 1.434 (2) |
C5A—C6A | 1.356 (2) | C5B—C6B | 1.354 (2) |
C5A—H5AA | 0.9300 | C5B—H5BA | 0.9300 |
C6A—C7A | 1.430 (2) | C6B—C7B | 1.429 (2) |
C6A—H6AA | 0.9300 | C6B—H6BA | 0.9300 |
C7A—C8A | 1.408 (2) | C7B—C8B | 1.409 (2) |
C7A—C11A | 1.420 (2) | C7B—C11B | 1.415 (2) |
C8A—C9A | 1.368 (3) | C8B—C9B | 1.373 (3) |
C8A—H8AA | 0.9300 | C8B—H8BA | 0.9300 |
C9A—C10A | 1.408 (2) | C9B—C10B | 1.408 (2) |
C9A—H9AA | 0.9300 | C9B—H9BA | 0.9300 |
C10A—C14A | 1.533 (2) | C10B—C14B | 1.526 (2) |
C11A—C12A | 1.461 (2) | C11B—C12B | 1.457 (2) |
C1A—N1A—C12A | 117.40 (15) | C1B—N1B—C12B | 117.69 (15) |
C10A—N2A—C11A | 117.80 (14) | C10B—N2B—C11B | 117.80 (15) |
N1A—C1A—C2A | 124.57 (15) | N1B—C1B—C2B | 124.64 (16) |
N1A—C1A—C13A | 115.06 (15) | N1B—C1B—C13B | 114.72 (15) |
C2A—C1A—C13A | 120.35 (15) | C2B—C1B—C13B | 120.63 (15) |
C3A—C2A—C1A | 117.74 (15) | C3B—C2B—C1B | 117.71 (16) |
C3A—C2A—H2AA | 121.1 | C3B—C2B—H2BA | 121.1 |
C1A—C2A—H2AA | 121.1 | C1B—C2B—H2BA | 121.1 |
C2A—C3A—C4A | 119.90 (16) | C2B—C3B—C4B | 119.67 (16) |
C2A—C3A—H3AA | 120.0 | C2B—C3B—H3BA | 120.2 |
C4A—C3A—H3AA | 120.0 | C4B—C3B—H3BA | 120.2 |
C3A—C4A—C12A | 117.41 (15) | C3B—C4B—C12B | 117.55 (16) |
C3A—C4A—C5A | 121.86 (16) | C3B—C4B—C5B | 121.71 (16) |
C12A—C4A—C5A | 120.72 (15) | C12B—C4B—C5B | 120.73 (15) |
C6A—C5A—C4A | 120.61 (16) | C6B—C5B—C4B | 120.36 (16) |
C6A—C5A—H5AA | 119.7 | C6B—C5B—H5BA | 119.8 |
C4A—C5A—H5AA | 119.7 | C4B—C5B—H5BA | 119.8 |
C5A—C6A—C7A | 120.75 (16) | C5B—C6B—C7B | 121.01 (16) |
C5A—C6A—H6AA | 119.6 | C5B—C6B—H6BA | 119.5 |
C7A—C6A—H6AA | 119.6 | C7B—C6B—H6BA | 119.5 |
C8A—C7A—C11A | 117.04 (16) | C8B—C7B—C11B | 117.17 (16) |
C8A—C7A—C6A | 122.40 (15) | C8B—C7B—C6B | 122.41 (16) |
C11A—C7A—C6A | 120.55 (15) | C11B—C7B—C6B | 120.41 (15) |
C9A—C8A—C7A | 120.16 (16) | C9B—C8B—C7B | 120.10 (16) |
C9A—C8A—H8AA | 119.9 | C9B—C8B—H8BA | 119.9 |
C7A—C8A—H8AA | 119.9 | C7B—C8B—H8BA | 119.9 |
C8A—C9A—C10A | 117.89 (16) | C8B—C9B—C10B | 117.73 (15) |
C8A—C9A—H9AA | 121.1 | C8B—C9B—H9BA | 121.1 |
C10A—C9A—H9AA | 121.1 | C10B—C9B—H9BA | 121.1 |
N2A—C10A—C9A | 124.26 (16) | N2B—C10B—C9B | 124.30 (16) |
N2A—C10A—C14A | 114.98 (14) | N2B—C10B—C14B | 115.15 (15) |
C9A—C10A—C14A | 120.75 (15) | C9B—C10B—C14B | 120.54 (15) |
N2A—C11A—C7A | 122.63 (15) | N2B—C11B—C7B | 122.70 (15) |
N2A—C11A—C12A | 118.78 (14) | N2B—C11B—C12B | 118.42 (15) |
C7A—C11A—C12A | 118.57 (15) | C7B—C11B—C12B | 118.86 (15) |
N1A—C12A—C4A | 122.83 (15) | N1B—C12B—C4B | 122.58 (15) |
N1A—C12A—C11A | 118.56 (15) | N1B—C12B—C11B | 118.99 (15) |
C4A—C12A—C11A | 118.60 (14) | C4B—C12B—C11B | 118.42 (15) |
C1A—C13A—Cl1A | 111.92 (12) | C1B—C13B—Cl1B | 111.59 (12) |
C1A—C13A—Cl2A | 111.35 (12) | C1B—C13B—Cl2B | 111.42 (12) |
Cl1A—C13A—Cl2A | 107.65 (9) | Cl1B—C13B—Cl2B | 108.11 (9) |
C1A—C13A—Cl3A | 109.01 (11) | C1B—C13B—Cl3B | 109.25 (11) |
Cl1A—C13A—Cl3A | 108.73 (9) | Cl1B—C13B—Cl3B | 108.67 (9) |
Cl2A—C13A—Cl3A | 108.08 (9) | Cl2B—C13B—Cl3B | 107.68 (9) |
C10A—C14A—Cl4A | 111.35 (12) | C10B—C14B—Cl4B | 112.10 (11) |
C10A—C14A—Cl6A | 109.72 (12) | C10B—C14B—Cl5B | 110.87 (12) |
Cl4A—C14A—Cl6A | 108.72 (9) | Cl4B—C14B—Cl5B | 107.66 (9) |
C10A—C14A—Cl5A | 111.23 (11) | C10B—C14B—Cl6B | 109.13 (12) |
Cl4A—C14A—Cl5A | 107.56 (10) | Cl4B—C14B—Cl6B | 108.79 (9) |
Cl6A—C14A—Cl5A | 108.16 (9) | Cl5B—C14B—Cl6B | 108.17 (9) |
C12A—N1A—C1A—C2A | −3.0 (2) | C12B—N1B—C1B—C2B | 3.0 (2) |
C12A—N1A—C1A—C13A | 178.49 (14) | C12B—N1B—C1B—C13B | −178.33 (14) |
N1A—C1A—C2A—C3A | 3.8 (3) | N1B—C1B—C2B—C3B | −3.9 (3) |
C13A—C1A—C2A—C3A | −177.75 (15) | C13B—C1B—C2B—C3B | 177.48 (15) |
C1A—C2A—C3A—C4A | −0.8 (3) | C1B—C2B—C3B—C4B | 0.9 (3) |
C2A—C3A—C4A—C12A | −2.4 (2) | C2B—C3B—C4B—C12B | 2.5 (2) |
C2A—C3A—C4A—C5A | 176.67 (16) | C2B—C3B—C4B—C5B | −176.39 (16) |
C3A—C4A—C5A—C6A | −178.26 (16) | C3B—C4B—C5B—C6B | 177.95 (17) |
C12A—C4A—C5A—C6A | 0.8 (3) | C12B—C4B—C5B—C6B | −0.9 (3) |
C4A—C5A—C6A—C7A | −2.6 (3) | C4B—C5B—C6B—C7B | 3.2 (3) |
C5A—C6A—C7A—C8A | −178.65 (17) | C5B—C6B—C7B—C8B | 178.21 (17) |
C5A—C6A—C7A—C11A | 0.5 (3) | C5B—C6B—C7B—C11B | −1.2 (3) |
C11A—C7A—C8A—C9A | −3.0 (2) | C11B—C7B—C8B—C9B | 2.8 (2) |
C6A—C7A—C8A—C9A | 176.17 (16) | C6B—C7B—C8B—C9B | −176.64 (16) |
C7A—C8A—C9A—C10A | −1.0 (3) | C7B—C8B—C9B—C10B | 0.9 (3) |
C11A—N2A—C10A—C9A | −2.9 (3) | C11B—N2B—C10B—C9B | 3.1 (2) |
C11A—N2A—C10A—C14A | 178.02 (14) | C11B—N2B—C10B—C14B | −178.51 (14) |
C8A—C9A—C10A—N2A | 4.2 (3) | C8B—C9B—C10B—N2B | −4.1 (3) |
C8A—C9A—C10A—C14A | −176.80 (16) | C8B—C9B—C10B—C14B | 177.53 (16) |
C10A—N2A—C11A—C7A | −1.5 (2) | C10B—N2B—C11B—C7B | 1.2 (2) |
C10A—N2A—C11A—C12A | −179.67 (15) | C10B—N2B—C11B—C12B | 179.64 (15) |
C8A—C7A—C11A—N2A | 4.4 (2) | C8B—C7B—C11B—N2B | −4.0 (2) |
C6A—C7A—C11A—N2A | −174.77 (15) | C6B—C7B—C11B—N2B | 175.45 (15) |
C8A—C7A—C11A—C12A | −177.43 (15) | C8B—C7B—C11B—C12B | 177.49 (15) |
C6A—C7A—C11A—C12A | 3.4 (2) | C6B—C7B—C11B—C12B | −3.0 (2) |
C1A—N1A—C12A—C4A | −0.7 (2) | C1B—N1B—C12B—C4B | 0.9 (2) |
C1A—N1A—C12A—C11A | −179.56 (15) | C1B—N1B—C12B—C11B | 179.52 (15) |
C3A—C4A—C12A—N1A | 3.3 (2) | C3B—C4B—C12B—N1B | −3.6 (2) |
C5A—C4A—C12A—N1A | −175.76 (15) | C5B—C4B—C12B—N1B | 175.35 (15) |
C3A—C4A—C12A—C11A | −177.82 (15) | C3B—C4B—C12B—C11B | 177.77 (15) |
C5A—C4A—C12A—C11A | 3.1 (2) | C5B—C4B—C12B—C11B | −3.3 (2) |
N2A—C11A—C12A—N1A | −8.0 (2) | N2B—C11B—C12B—N1B | 7.9 (2) |
C7A—C11A—C12A—N1A | 173.80 (15) | C7B—C11B—C12B—N1B | −173.53 (15) |
N2A—C11A—C12A—C4A | 173.16 (15) | N2B—C11B—C12B—C4B | −173.35 (15) |
C7A—C11A—C12A—C4A | −5.1 (2) | C7B—C11B—C12B—C4B | 5.2 (2) |
N1A—C1A—C13A—Cl1A | −30.18 (18) | N1B—C1B—C13B—Cl1B | 34.79 (18) |
C2A—C1A—C13A—Cl1A | 151.19 (14) | C2B—C1B—C13B—Cl1B | −146.50 (14) |
N1A—C1A—C13A—Cl2A | −150.73 (13) | N1B—C1B—C13B—Cl2B | 155.75 (13) |
C2A—C1A—C13A—Cl2A | 30.6 (2) | C2B—C1B—C13B—Cl2B | −25.5 (2) |
N1A—C1A—C13A—Cl3A | 90.12 (16) | N1B—C1B—C13B—Cl3B | −85.40 (16) |
C2A—C1A—C13A—Cl3A | −88.50 (17) | C2B—C1B—C13B—Cl3B | 93.31 (17) |
N2A—C10A—C14A—Cl4A | −33.57 (19) | N2B—C10B—C14B—Cl4B | 27.50 (19) |
C9A—C10A—C14A—Cl4A | 147.36 (14) | C9B—C10B—C14B—Cl4B | −154.01 (14) |
N2A—C10A—C14A—Cl6A | 86.84 (16) | N2B—C10B—C14B—Cl5B | 147.86 (13) |
C9A—C10A—C14A—Cl6A | −92.23 (17) | C9B—C10B—C14B—Cl5B | −33.7 (2) |
N2A—C10A—C14A—Cl5A | −153.53 (13) | N2B—C10B—C14B—Cl6B | −93.09 (15) |
C9A—C10A—C14A—Cl5A | 27.4 (2) | C9B—C10B—C14B—Cl6B | 85.40 (17) |
Experimental details
Crystal data | |
Chemical formula | C14H6Cl6N2 |
Mr | 414.91 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 24.3001 (6), 6.8825 (2), 20.3461 (5) |
β (°) | 114.689 (1) |
V (Å3) | 3091.74 (14) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.11 |
Crystal size (mm) | 0.59 × 0.36 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.561, 0.898 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 63570, 13520, 9474 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.807 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.105, 1.06 |
No. of reflections | 13520 |
No. of parameters | 397 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.60, −0.54 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Acknowledgements
SG and ACM thank the Indian Government for financial support. SC thanks the Prince of Songkla University for financial support through the Crystal Materials Research Unit. The authors also thank the Malaysian Government and Universiti Sains Malaysia for the Research University Golden Goose grant No. 1001/PFIZIK/811012.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Trichloromethyl-substituted heterocyclic compounds are of great importance due to their broad spectrum of biological activities. 2,9-Bis(trichloromethyl)-1,10-phenanthroline is used as a potentially robust ligand for metal oxidation catalysts (Beer et al., 1993). 1,10-phenanthroline derivatives also show antitumor (Wesselinova et al., 2009) as well as luminescence properties (Armaroli et al., 1992). Recently a series of trichloromethyl-substituted heterocyclic compounds has been synthesized (Goswami et al., 2007) in good yield using N-chlorosuccinimide (NCS) and triphenylphosphine (PPh3) in carbon tetrachloride. In supramolecular chemistry it is known that the self-association of individual molecules can lead to the formation of highly complex and fascinating supramolecular aggregates if halogen···π interactions contribute to the formation of specific motifs (Emmerling et al., 2007). The title compound was synthesized in order to study its supramolecular structure.
The asymmetric unit (Fig. 1) contains two molecules, A and B, having slight differences in bond lengths and angles. The 1,10-phenanthroline unit is not strictly planar, with dihedral angles between the central ring and the C1–C4/C12/N1 and C7–C11/N2 rings of 3.81 (7) and 4.30 (7)°, respectively, for molecule A [the corresponding values for molecule B are 4.13 (8) and 4.10 (7)° ]. In both molecules, A and B, none of the Cl atoms of the trichloromethyl substitutent is coplanar with the 1,10-phenanthroline ring system. The bond distances adopt normal values (Allen et al., 1987).
In the crystal structure (Fig. 2), non-covalent interactions play a significant role in the three-dimensional supramolecular architecture, in which the molecules are interlinked into sheets parallel to the ac plane. These sheets are stacked along the b axis in such a way that the molecules are antiparallel. These sheets are further connected into a supramolecular network. There are no classical hydrogen bonds. However, C···Cl [3.637 (2) Å], Cl···Cl [3.5639 (5)–3.6807 (8) Å] and Cl···N [3.3802 (15)–3.4093 (15) Å] short contacts are present. π–π interactions are also observed, with distances of Cg1···Cg2i = 3.6610 (9) Å, Cg1···Cg2ii = 3.5868 (9) Å, Cg1···Cg3i = 3.7331 (10) Å, Cg2···Cg3ii = 3.7845 (9) Å, Cg4···Cg5iii = 3.5949 (9) Å, Cg4···Cg5iv = 3.6404 (9) Å, Cg4···Cg6iii = 3.7417 (10) Å and Cg5···Cg6iv = 3.7198 (9) Å (symmetry codes: (i) 1 - x, 1 - y, 1 - z; (ii) 1 - x, 2 - y, 1 - z; (iii) 2 - x, -y, 1 - z and (iv) 2 - x, 1 - y, 1 - z). Cg1, Cg2, Cg3, Cg4, Cg5 and Cg6 are the centroids of the rings C1A–C4A/C12A/N1A, C7A–C11A/N2A, C4A–C7A/C11A–C12A, C1B–C4B/C12B/N1B, C7B–C11B/N2B and C4B–C7B/C11B–C12B, respectively.