organic compounds
Guanidinium 4-aminobenzoate
aCEMDRX, Physics Department, University of Coimbra, P-3004-516 Coimbra, Portugal
*Correspondence e-mail: psidonio@pollux.fis.uc.pt
In the title compound, CH6N3+·C7H6NO2−, the cation and anion lie on crystallographic mirror planes. The 4-aminobenzoate anion is almost in a planar conformation with a maximum deviation of 0.024 (2) Å for the N atom. The bond length in the deprotonated carboxyl group is intermediate between those of normal single and double Csp2=O bonds, indicating delocalization of the charge over both O atoms of the COO− group. In the crystal, N—H⋯O hydrogen bonds assemble the ions in layers propagating in the bc plane. This structure is very similar to that of guanidinium benzoate.
Related literature
For a related structure, see: Pereira Silva et al. (2007). 4-Aminobenzoic acid has two known polymorphs, see: Gracin & Rasmuson (2004). For the potential applications of guanidine compounds in non-linear optics, see: Zyss et al. (1993). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2003); cell SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053681000396X/ds2019sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681000396X/ds2019Isup2.hkl
The title compound was prepared by adding 4-aminobenzoic acid (Aldrich, 99%, 1.0 mmol) to guanidinium carbonate (Aldrich 99%, 0.5 mmol) in a water solution (100 ml). The solution was slowly warmed to the boiling point and then left to evaporate under ambient conditions. After 2 weeks, small light brown single crystals were obtained.
All H atoms were located in a difference Fourier synthesis. The guanidinium H-atom coordinates were refined, with Uiso(H) = 1.2Ueq(N). The H atoms of the anion were placed in calculated positions and refined as riding on their parent atoms, using SHELXL97 (Sheldrick, 2008) defaults [C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C)].
Data collection: APEX2 (Bruker, 2003); cell
SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).CH6N3+·C7H6NO2− | F(000) = 416 |
Mr = 196.22 | Dx = 1.274 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 8009 reflections |
a = 14.9833 (4) Å | θ = 2.8–27.5° |
b = 8.0602 (2) Å | µ = 0.10 mm−1 |
c = 8.4737 (2) Å | T = 293 K |
V = 1023.36 (4) Å3 | Irregular edge, light brown |
Z = 4 | 0.33 × 0.19 × 0.15 mm |
Bruker APEX2 CCD area-detector diffractometer | 1323 independent reflections |
Radiation source: fine-focus sealed tube | 960 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ϕ and ω scans | θmax = 28.1°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −18→19 |
Tmin = 0.898, Tmax = 0.986 | k = −10→9 |
19879 measured reflections | l = −10→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.051P)2 + 0.1635P] where P = (Fo2 + 2Fc2)/3 |
1323 reflections | (Δ/σ)max < 0.001 |
85 parameters | Δρmax = 0.13 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
CH6N3+·C7H6NO2− | V = 1023.36 (4) Å3 |
Mr = 196.22 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 14.9833 (4) Å | µ = 0.10 mm−1 |
b = 8.0602 (2) Å | T = 293 K |
c = 8.4737 (2) Å | 0.33 × 0.19 × 0.15 mm |
Bruker APEX2 CCD area-detector diffractometer | 1323 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 960 reflections with I > 2σ(I) |
Tmin = 0.898, Tmax = 0.986 | Rint = 0.026 |
19879 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.13 e Å−3 |
1323 reflections | Δρmin = −0.20 e Å−3 |
85 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.34385 (6) | 0.11290 (10) | −0.04842 (10) | 0.0519 (3) | |
C1 | 0.43652 (10) | 0.2500 | 0.13590 (17) | 0.0390 (4) | |
C2 | 0.46854 (8) | 0.10235 (14) | 0.19926 (13) | 0.0462 (3) | |
H2 | 0.4490 | 0.0019 | 0.1577 | 0.055* | |
C3 | 0.52869 (8) | 0.10183 (16) | 0.32253 (14) | 0.0542 (3) | |
H3 | 0.5491 | 0.0015 | 0.3630 | 0.065* | |
C4 | 0.55904 (11) | 0.2500 | 0.3867 (2) | 0.0556 (5) | |
C5 | 0.37086 (10) | 0.2500 | 0.00390 (17) | 0.0391 (4) | |
N4 | 0.61881 (15) | 0.2500 | 0.5120 (3) | 0.0886 (7) | |
H4 | 0.6353 (13) | 0.149 (3) | 0.543 (2) | 0.106* | |
N1 | 0.25025 (7) | 0.10833 (13) | 0.66469 (14) | 0.0551 (3) | |
H1A | 0.2845 (9) | 0.1093 (16) | 0.7576 (18) | 0.066* | |
H1B | 0.2285 (9) | 0.016 (2) | 0.6258 (17) | 0.066* | |
N2 | 0.17018 (11) | 0.2500 | 0.47745 (19) | 0.0563 (4) | |
H2A | 0.1493 (9) | 0.147 (2) | 0.4470 (16) | 0.068* | |
C6 | 0.22330 (11) | 0.2500 | 0.6031 (2) | 0.0426 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0705 (6) | 0.0334 (4) | 0.0519 (5) | −0.0031 (4) | −0.0139 (4) | −0.0006 (3) |
C1 | 0.0415 (8) | 0.0398 (8) | 0.0358 (7) | 0.000 | 0.0050 (6) | 0.000 |
C2 | 0.0489 (6) | 0.0455 (6) | 0.0442 (6) | 0.0021 (5) | 0.0014 (5) | 0.0013 (5) |
C3 | 0.0530 (7) | 0.0627 (8) | 0.0467 (7) | 0.0100 (6) | −0.0004 (5) | 0.0089 (6) |
C4 | 0.0443 (9) | 0.0813 (14) | 0.0411 (9) | 0.000 | −0.0018 (8) | 0.000 |
C5 | 0.0460 (8) | 0.0335 (8) | 0.0380 (8) | 0.000 | 0.0035 (7) | 0.000 |
N4 | 0.0818 (13) | 0.1110 (19) | 0.0732 (13) | 0.000 | −0.0344 (11) | 0.000 |
N1 | 0.0655 (7) | 0.0379 (6) | 0.0618 (7) | 0.0026 (5) | −0.0206 (5) | −0.0012 (5) |
N2 | 0.0656 (10) | 0.0446 (9) | 0.0587 (9) | 0.000 | −0.0226 (8) | 0.000 |
C6 | 0.0419 (8) | 0.0398 (8) | 0.0460 (8) | 0.000 | −0.0036 (7) | 0.000 |
O1—C5 | 1.2575 (11) | C4—N4 | 1.390 (3) |
C1—C2i | 1.3910 (13) | C5—O1i | 1.2575 (11) |
C1—C2 | 1.3910 (13) | N4—H4 | 0.89 (2) |
C1—C5 | 1.490 (2) | N1—C6 | 1.3188 (13) |
C2—C3 | 1.3796 (17) | N1—H1A | 0.940 (15) |
C2—H2 | 0.9300 | N1—H1B | 0.875 (16) |
C3—C4 | 1.3886 (15) | N2—C6 | 1.329 (2) |
C3—H3 | 0.9300 | N2—H2A | 0.923 (16) |
C4—C3i | 1.3886 (15) | C6—N1i | 1.3188 (13) |
C2i—C1—C2 | 117.65 (14) | O1—C5—O1i | 122.98 (14) |
C2i—C1—C5 | 121.18 (7) | O1—C5—C1 | 118.50 (7) |
C2—C1—C5 | 121.18 (7) | O1i—C5—C1 | 118.50 (7) |
C3—C2—C1 | 121.34 (11) | C4—N4—H4 | 113.7 (13) |
C3—C2—H2 | 119.3 | C6—N1—H1A | 119.5 (8) |
C1—C2—H2 | 119.3 | C6—N1—H1B | 118.1 (10) |
C2—C3—C4 | 120.50 (12) | H1A—N1—H1B | 121.7 (13) |
C2—C3—H3 | 119.7 | C6—N2—H2A | 115.3 (9) |
C4—C3—H3 | 119.7 | N1i—C6—N1 | 119.95 (15) |
C3—C4—C3i | 118.64 (15) | N1i—C6—N2 | 120.02 (8) |
C3—C4—N4 | 120.68 (8) | N1—C6—N2 | 120.02 (8) |
C3i—C4—N4 | 120.68 (8) | ||
C2i—C1—C2—C3 | 1.2 (2) | C2i—C1—C5—O1 | −179.70 (13) |
C5—C1—C2—C3 | −179.36 (12) | C2—C1—C5—O1 | 0.8 (2) |
C1—C2—C3—C4 | −0.1 (2) | C2i—C1—C5—O1i | −0.8 (2) |
C2—C3—C4—C3i | −1.0 (3) | C2—C1—C5—O1i | 179.70 (13) |
C2—C3—C4—N4 | 179.23 (16) |
Symmetry code: (i) x, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1ii | 0.940 (15) | 1.869 (16) | 2.8068 (14) | 175.4 (13) |
N1—H1B···O1iii | 0.875 (16) | 2.107 (16) | 2.9032 (15) | 151.0 (13) |
N2—H2A···O1iii | 0.923 (16) | 2.099 (16) | 2.9408 (8) | 151.1 (12) |
Symmetry codes: (ii) x, y, z+1; (iii) −x+1/2, −y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | CH6N3+·C7H6NO2− |
Mr | 196.22 |
Crystal system, space group | Orthorhombic, Pnma |
Temperature (K) | 293 |
a, b, c (Å) | 14.9833 (4), 8.0602 (2), 8.4737 (2) |
V (Å3) | 1023.36 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.33 × 0.19 × 0.15 |
Data collection | |
Diffractometer | Bruker APEX2 CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.898, 0.986 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19879, 1323, 960 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.662 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.109, 1.04 |
No. of reflections | 1323 |
No. of parameters | 85 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.20 |
Computer programs: APEX2 (Bruker, 2003), SAINT (Bruker, 2003), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.940 (15) | 1.869 (16) | 2.8068 (14) | 175.4 (13) |
N1—H1B···O1ii | 0.875 (16) | 2.107 (16) | 2.9032 (15) | 151.0 (13) |
N2—H2A···O1ii | 0.923 (16) | 2.099 (16) | 2.9408 (8) | 151.1 (12) |
Symmetry codes: (i) x, y, z+1; (ii) −x+1/2, −y, z+1/2. |
Acknowledgements
This work was supported by the Fundação para a Ciência e a Tecnologia (FCT), under scholarship SFRH/BD/38387/2008 and project PTDC/FIS/103587/2008.
References
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Guanidine is a strong Lewis base and the guanidinium cation may be easly anchored onto numerous inorganic and organic anions and polyanions, largely because of the presence of six potential donor sites for hydrogen-bonding interactions. From the point of view of their physical properties, guanidine compounds are potentially interesting for non-linear optics applications since guanidinium, a polarizable acentric two-dimensional cation, can be regarded as a planar octupolar chemical entity (Zyss et al., 1993). We are currently engaged in a research project aimed at investigating the structures, and the dielectric and optical properties of guanidine and guanidine derivative compounds.
4-Aminobenzoic acid has two known polymorphs (Gracin & Rasmuson, 2004) and is one of the most versatile acids for structure extension by linear hydrogen-bonding associations, through both the carboxylic acid and the amine functional groups.
Both ions of the title compound, (I), Fig. 1, possess mirror symmetry, with the C6 and N2 atoms of the cation situated in the mirror plane as well as the carboxylate group C atom, the ipso-C and the para-C and N atoms of the anion.
The 4-aminobenzoate anion is almost in a planar conformation, with the atoms N4 and C5 displaced from the ring plane by about the same amounts, 0.024 (2) and 0.022 (2)Å respectively, and in the same direction.
The dihedral angle between the phenyl ring and the carboxylate group [1.58 (16)°] is slightly larger than the corresponding angle in guanidinium benzoate [0.41 (18)°].
The O—C—O angle of the carboxylate group is greater than 120° because of the steric effect of lone-pair electrons on both O atoms. The bond length in the deprotonated carboxyl group is intermediate between the single Csp2—O (1.308-1.320 Å) and double Csp2═O bond lengths (1.214-1.224 Å, Allen et al., 1987), indicating delocalization of the charge over both O atoms of the COO- group.
The three C—N bond lengths in the propeller-shaped (CH6N3)+ cation are similar (Table 1), the symmetry of the cation being C3 h. The usual model of electron delocalization in this species, leading to a C—N bond order of 1.33, is applicable here.
All H atoms on the guanidinium cation are involved in N—H···O interactions with the anion (Fig. 2, Table 2) forming infinite layers propagating in the bc plane, each carboxylate O atom accepting three hydrogens. In each layer the cation is bonded to three anions, two approximately perpendicular and one approximately coplanar (Fig. 3). This pattern is also found in guanidinium benzoate (Pereira Silva et al., 2007).