organic compounds
2-[5-(Benzo[d]thiazol-2-yl)thiophen-2-yl]benzo[d]thiazole
aDepartment of Chemistry, Nelson Mandela Metropolitan University, 6031 Port Elizabeth, South Africa, and bDepartment of Chemistry, Ludiwig-Maximilians University, D-81377 München, Germany
*Correspondence e-mail: thomas.gerber@nmmu.ac.za
The structure of the title compound, C18H10N2S3, consists of a central thiophene ring and two terminal thiazole rings. The two S atoms of the thiazole rings are trans to the thiophene S atom sulfur. The thiazole rings are approximately coplanar with the thiophene ring, with dihedral angles of 6.23 (11) and 4.81 (11)° between them. In the crystal, zigzag chains are formed along [010] by weak C—H⋯N interactions.
Related literature
For the synthesis of thiophene derivatives, see: Kaleta et al. (2006); Minetto et al. (2005); Bayh et al. (2005). For their conformation, see: Alberti et al. (1986); Hagen (1986); Salman (1982) and for their applications, see: Seed et al. (2003); Cheylan et al. (2006); Karimian (2009); Kiryanov et al. (2001); Shi et al. (1996).
Experimental
Crystal data
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Refinement
|
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: publCIF (Westrip, 2010) and PARST (Nardelli, 1995).
Supporting information
10.1107/S1600536810004009/ez2199sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810004009/ez2199Isup2.hkl
All chemicals used (reagent grade) were commercially available. A mass of 0.281 g (0.0020 mol) of 2,5-thiophenedicarboxaldehyde was dissolved in methanol (20 cm3), and 0.502 g (0.0040 mol) of 2-aminothiophenol was added with stirring. The mixture was heated under reflux for an hour, then cooled to room temperature and filtered. After standing at 0°C for 24 h, a yellow precipitate was collected. Recrystallization from ethanol gave yellow needles (0.378 g, 54 %), with the formulation C18H10N2S3 and suitable for X-ray analysis. M.p. 203–206 °C.
The C-bound H atoms were positioned geometrically (0.95 Å for CH) and treated as riding on their parent atoms with Uiso(H) = 1.2Ueq(C).
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: publCIF (Westrip, 2010) and PARST (Nardelli, 1995).C18H10N2S3 | F(000) = 720 |
Mr = 350.48 | Dx = 1.521 (1) Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 15.7297 (14) Å | Cell parameters from 1275 reflections |
b = 8.2396 (5) Å | θ = 4.2–26.2° |
c = 12.8160 (12) Å | µ = 0.48 mm−1 |
β = 112.872 (11)° | T = 200 K |
V = 1530.4 (2) Å3 | Needles, yellow |
Z = 4 | 0.34 × 0.15 × 0.01 mm |
Oxford XCalibur diffractometer | 3086 independent reflections |
Radiation source: fine-focus sealed tube | 1452 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.053 |
Detector resolution: 15.9809 pixels mm-1 | θmax = 26.3°, θmin = 4.2° |
ω scans | h = −19→19 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −9→10 |
Tmin = 0.839, Tmax = 1.000 | l = −9→15 |
5789 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.051 | H-atom parameters constrained |
S = 0.72 | w = 1/[σ2(Fo2) + (0.006P)2] where P = (Fo2 + 2Fc2)/3 |
3086 reflections | (Δ/σ)max < 0.001 |
208 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
C18H10N2S3 | V = 1530.4 (2) Å3 |
Mr = 350.48 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 15.7297 (14) Å | µ = 0.48 mm−1 |
b = 8.2396 (5) Å | T = 200 K |
c = 12.8160 (12) Å | 0.34 × 0.15 × 0.01 mm |
β = 112.872 (11)° |
Oxford XCalibur diffractometer | 3086 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 1452 reflections with I > 2σ(I) |
Tmin = 0.839, Tmax = 1.000 | Rint = 0.053 |
5789 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.051 | H-atom parameters constrained |
S = 0.72 | Δρmax = 0.29 e Å−3 |
3086 reflections | Δρmin = −0.30 e Å−3 |
208 parameters |
x | y | z | Uiso*/Ueq | ||
S1 | 0.19188 (5) | −0.01268 (9) | 0.55789 (7) | 0.0372 (2) | |
S2 | 0.40390 (5) | 0.14749 (8) | 0.43819 (7) | 0.0294 (2) | |
S3 | 0.65397 (5) | 0.41064 (8) | 0.64495 (7) | 0.0351 (2) | |
N1 | 0.22730 (15) | −0.0478 (2) | 0.3780 (2) | 0.0306 (7) | |
N2 | 0.57525 (15) | 0.3239 (2) | 0.4337 (2) | 0.0258 (6) | |
C1 | 0.11335 (19) | −0.1200 (3) | 0.4461 (3) | 0.0294 (8) | |
C2 | 0.1446 (2) | −0.1266 (3) | 0.3573 (3) | 0.0299 (8) | |
C3 | 0.0918 (2) | −0.2090 (3) | 0.2584 (3) | 0.0393 (9) | |
H3 | 0.1119 | −0.2156 | 0.1975 | 0.047* | |
C4 | 0.0108 (2) | −0.2802 (3) | 0.2499 (3) | 0.0421 (9) | |
H4 | −0.0250 | −0.3369 | 0.1825 | 0.051* | |
C5 | −0.0200 (2) | −0.2717 (3) | 0.3369 (3) | 0.0436 (9) | |
H5 | −0.0766 | −0.3220 | 0.3284 | 0.052* | |
C6 | 0.0300 (2) | −0.1917 (3) | 0.4350 (3) | 0.0383 (9) | |
H6 | 0.0084 | −0.1851 | 0.4946 | 0.046* | |
C7 | 0.25959 (18) | 0.0157 (3) | 0.4775 (3) | 0.0252 (7) | |
C8 | 0.34453 (18) | 0.1056 (3) | 0.5237 (3) | 0.0233 (7) | |
C9 | 0.38812 (19) | 0.1676 (3) | 0.6290 (3) | 0.0321 (8) | |
H9 | 0.3656 | 0.1568 | 0.6875 | 0.039* | |
C10 | 0.46999 (19) | 0.2493 (3) | 0.6426 (2) | 0.0292 (8) | |
H10 | 0.5091 | 0.2988 | 0.7115 | 0.035* | |
C11 | 0.48737 (18) | 0.2503 (3) | 0.5468 (2) | 0.0242 (7) | |
C12 | 0.56531 (19) | 0.3212 (3) | 0.5304 (3) | 0.0252 (8) | |
C13 | 0.70982 (19) | 0.4587 (3) | 0.5569 (3) | 0.0278 (8) | |
C14 | 0.6576 (2) | 0.4025 (3) | 0.4477 (3) | 0.0280 (8) | |
C15 | 0.6891 (2) | 0.4295 (3) | 0.3612 (3) | 0.0372 (8) | |
H15 | 0.6546 | 0.3929 | 0.2862 | 0.045* | |
C16 | 0.7711 (2) | 0.5105 (3) | 0.3873 (3) | 0.0401 (9) | |
H16 | 0.7925 | 0.5313 | 0.3287 | 0.048* | |
C17 | 0.8235 (2) | 0.5627 (3) | 0.4957 (3) | 0.0392 (9) | |
H17 | 0.8806 | 0.6163 | 0.5109 | 0.047* | |
C18 | 0.79350 (19) | 0.5377 (3) | 0.5819 (3) | 0.0370 (9) | |
H18 | 0.8291 | 0.5735 | 0.6567 | 0.044* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0338 (5) | 0.0475 (5) | 0.0327 (6) | −0.0084 (4) | 0.0156 (4) | −0.0013 (4) |
S2 | 0.0278 (4) | 0.0338 (4) | 0.0285 (5) | −0.0019 (4) | 0.0131 (4) | −0.0010 (4) |
S3 | 0.0355 (5) | 0.0414 (5) | 0.0292 (6) | −0.0081 (4) | 0.0136 (4) | −0.0030 (4) |
N1 | 0.0267 (16) | 0.0288 (16) | 0.039 (2) | −0.0070 (12) | 0.0154 (14) | −0.0019 (12) |
N2 | 0.0235 (14) | 0.0293 (14) | 0.0270 (18) | −0.0032 (12) | 0.0124 (13) | 0.0000 (12) |
C1 | 0.0301 (18) | 0.0262 (18) | 0.031 (2) | 0.0001 (15) | 0.0110 (16) | 0.0036 (14) |
C2 | 0.0319 (19) | 0.0250 (18) | 0.031 (2) | 0.0034 (15) | 0.0107 (17) | 0.0043 (15) |
C3 | 0.046 (2) | 0.045 (2) | 0.032 (2) | −0.0112 (17) | 0.0211 (19) | −0.0050 (17) |
C4 | 0.037 (2) | 0.047 (2) | 0.037 (3) | −0.0182 (17) | 0.0080 (19) | −0.0047 (17) |
C5 | 0.035 (2) | 0.048 (2) | 0.048 (3) | −0.0127 (17) | 0.016 (2) | 0.0046 (19) |
C6 | 0.033 (2) | 0.046 (2) | 0.039 (3) | −0.0050 (17) | 0.0173 (19) | 0.0065 (18) |
C7 | 0.0272 (19) | 0.0201 (16) | 0.031 (2) | 0.0017 (15) | 0.0142 (17) | 0.0023 (16) |
C8 | 0.0214 (17) | 0.0226 (16) | 0.028 (2) | −0.0018 (14) | 0.0125 (16) | 0.0004 (15) |
C9 | 0.0338 (19) | 0.0379 (18) | 0.030 (2) | −0.0021 (15) | 0.0182 (18) | 0.0067 (16) |
C10 | 0.0250 (18) | 0.0350 (18) | 0.025 (2) | −0.0007 (15) | 0.0066 (16) | −0.0008 (15) |
C11 | 0.0260 (18) | 0.0194 (16) | 0.025 (2) | 0.0006 (14) | 0.0079 (17) | 0.0001 (14) |
C12 | 0.0295 (19) | 0.0170 (16) | 0.029 (2) | 0.0018 (14) | 0.0107 (17) | 0.0010 (14) |
C13 | 0.0241 (18) | 0.0270 (18) | 0.036 (2) | 0.0003 (14) | 0.0154 (17) | 0.0032 (15) |
C14 | 0.0318 (19) | 0.0253 (17) | 0.029 (2) | 0.0035 (15) | 0.0148 (17) | 0.0016 (15) |
C15 | 0.045 (2) | 0.0423 (19) | 0.029 (2) | −0.0049 (17) | 0.0191 (18) | −0.0056 (16) |
C16 | 0.041 (2) | 0.0410 (19) | 0.051 (3) | −0.0025 (17) | 0.033 (2) | 0.0007 (19) |
C17 | 0.031 (2) | 0.0324 (18) | 0.056 (3) | −0.0053 (16) | 0.020 (2) | −0.0017 (18) |
C18 | 0.0306 (19) | 0.039 (2) | 0.033 (2) | −0.0048 (15) | 0.0033 (17) | −0.0002 (16) |
S1—C1 | 1.728 (3) | C6—H6 | 0.9500 |
S1—C7 | 1.761 (3) | C7—C8 | 1.438 (3) |
S2—C11 | 1.720 (3) | C8—C9 | 1.353 (3) |
S2—C8 | 1.729 (3) | C9—C10 | 1.403 (3) |
S3—C13 | 1.725 (3) | C9—H9 | 0.9500 |
S3—C12 | 1.747 (3) | C10—C11 | 1.357 (3) |
N1—C7 | 1.286 (3) | C10—H10 | 0.9500 |
N1—C2 | 1.384 (3) | C11—C12 | 1.445 (3) |
N2—C12 | 1.308 (3) | C13—C18 | 1.389 (3) |
N2—C14 | 1.397 (3) | C13—C14 | 1.398 (4) |
C1—C6 | 1.394 (3) | C14—C15 | 1.396 (4) |
C1—C2 | 1.404 (4) | C15—C16 | 1.374 (3) |
C2—C3 | 1.392 (3) | C15—H15 | 0.9500 |
C3—C4 | 1.368 (4) | C16—C17 | 1.380 (4) |
C3—H3 | 0.9500 | C16—H16 | 0.9500 |
C4—C5 | 1.379 (4) | C17—C18 | 1.375 (4) |
C4—H4 | 0.9500 | C17—H17 | 0.9500 |
C5—C6 | 1.366 (4) | C18—H18 | 0.9500 |
C5—H5 | 0.9500 | ||
C1—S1—C7 | 89.01 (14) | C8—C9—H9 | 123.5 |
C11—S2—C8 | 90.91 (14) | C10—C9—H9 | 123.5 |
C13—S3—C12 | 89.42 (14) | C11—C10—C9 | 112.8 (3) |
C7—N1—C2 | 111.1 (3) | C11—C10—H10 | 123.6 |
C12—N2—C14 | 109.4 (2) | C9—C10—H10 | 123.6 |
C6—C1—C2 | 120.8 (3) | C10—C11—C12 | 127.9 (3) |
C6—C1—S1 | 129.9 (3) | C10—C11—S2 | 111.7 (2) |
C2—C1—S1 | 109.2 (2) | C12—C11—S2 | 120.3 (2) |
N1—C2—C3 | 125.9 (3) | N2—C12—C11 | 124.4 (3) |
N1—C2—C1 | 115.2 (3) | N2—C12—S3 | 116.0 (2) |
C3—C2—C1 | 118.9 (3) | C11—C12—S3 | 119.5 (2) |
C4—C3—C2 | 119.3 (3) | C18—C13—C14 | 121.4 (3) |
C4—C3—H3 | 120.4 | C18—C13—S3 | 129.3 (3) |
C2—C3—H3 | 120.4 | C14—C13—S3 | 109.2 (2) |
C3—C4—C5 | 121.5 (3) | C15—C14—N2 | 124.7 (3) |
C3—C4—H4 | 119.3 | C15—C14—C13 | 119.4 (3) |
C5—C4—H4 | 119.3 | N2—C14—C13 | 115.9 (3) |
C6—C5—C4 | 120.8 (3) | C16—C15—C14 | 118.3 (3) |
C6—C5—H5 | 119.6 | C16—C15—H15 | 120.9 |
C4—C5—H5 | 119.6 | C14—C15—H15 | 120.9 |
C5—C6—C1 | 118.6 (3) | C15—C16—C17 | 122.2 (3) |
C5—C6—H6 | 120.7 | C15—C16—H16 | 118.9 |
C1—C6—H6 | 120.7 | C17—C16—H16 | 118.9 |
N1—C7—C8 | 124.3 (3) | C18—C17—C16 | 120.3 (3) |
N1—C7—S1 | 115.5 (2) | C18—C17—H17 | 119.8 |
C8—C7—S1 | 120.2 (2) | C16—C17—H17 | 119.8 |
C9—C8—C7 | 129.4 (3) | C17—C18—C13 | 118.3 (3) |
C9—C8—S2 | 111.5 (2) | C17—C18—H18 | 120.8 |
C7—C8—S2 | 119.1 (2) | C13—C18—H18 | 120.8 |
C8—C9—C10 | 113.0 (3) | ||
C7—S1—C1—C6 | −178.8 (3) | C9—C10—C11—C12 | −179.3 (2) |
C7—S1—C1—C2 | 0.3 (2) | C9—C10—C11—S2 | −0.9 (3) |
C7—N1—C2—C3 | −179.5 (3) | C8—S2—C11—C10 | 0.7 (2) |
C7—N1—C2—C1 | 0.5 (3) | C8—S2—C11—C12 | 179.2 (2) |
C6—C1—C2—N1 | 178.7 (2) | C14—N2—C12—C11 | 179.5 (2) |
S1—C1—C2—N1 | −0.5 (3) | C14—N2—C12—S3 | −0.6 (3) |
C6—C1—C2—C3 | −1.3 (4) | C10—C11—C12—N2 | −176.7 (3) |
S1—C1—C2—C3 | 179.5 (2) | S2—C11—C12—N2 | 5.1 (4) |
N1—C2—C3—C4 | −179.5 (3) | C10—C11—C12—S3 | 3.4 (4) |
C1—C2—C3—C4 | 0.5 (4) | S2—C11—C12—S3 | −174.81 (13) |
C2—C3—C4—C5 | 0.3 (5) | C13—S3—C12—N2 | 0.6 (2) |
C3—C4—C5—C6 | −0.3 (5) | C13—S3—C12—C11 | −179.5 (2) |
C4—C5—C6—C1 | −0.6 (5) | C12—S3—C13—C18 | −179.6 (3) |
C2—C1—C6—C5 | 1.4 (4) | C12—S3—C13—C14 | −0.4 (2) |
S1—C1—C6—C5 | −179.6 (2) | C12—N2—C14—C15 | −178.8 (3) |
C2—N1—C7—C8 | −180.0 (2) | C12—N2—C14—C13 | 0.2 (3) |
C2—N1—C7—S1 | −0.3 (3) | C18—C13—C14—C15 | −1.5 (4) |
C1—S1—C7—N1 | 0.0 (2) | S3—C13—C14—C15 | 179.3 (2) |
C1—S1—C7—C8 | 179.7 (2) | C18—C13—C14—N2 | 179.4 (2) |
N1—C7—C8—C9 | −174.9 (3) | S3—C13—C14—N2 | 0.2 (3) |
S1—C7—C8—C9 | 5.4 (4) | N2—C14—C15—C16 | 179.2 (2) |
N1—C7—C8—S2 | 5.6 (4) | C13—C14—C15—C16 | 0.3 (4) |
S1—C7—C8—S2 | −174.02 (14) | C14—C15—C16—C17 | 1.2 (4) |
C11—S2—C8—C9 | −0.3 (2) | C15—C16—C17—C18 | −1.4 (5) |
C11—S2—C8—C7 | 179.2 (2) | C16—C17—C18—C13 | 0.1 (4) |
C7—C8—C9—C10 | −179.6 (2) | C14—C13—C18—C17 | 1.3 (4) |
S2—C8—C9—C10 | −0.1 (3) | S3—C13—C18—C17 | −179.7 (2) |
C8—C9—C10—C11 | 0.7 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16···N1i | 0.95 | 2.63 | 3.444 (4) | 144 |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C18H10N2S3 |
Mr | 350.48 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 200 |
a, b, c (Å) | 15.7297 (14), 8.2396 (5), 12.8160 (12) |
β (°) | 112.872 (11) |
V (Å3) | 1530.4 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.48 |
Crystal size (mm) | 0.34 × 0.15 × 0.01 |
Data collection | |
Diffractometer | Oxford XCalibur diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.839, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5789, 3086, 1452 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.624 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.051, 0.72 |
No. of reflections | 3086 |
No. of parameters | 208 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.30 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006), publCIF (Westrip, 2010) and PARST (Nardelli, 1995).
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16···N1i | 0.95 | 2.63 | 3.444 (4) | 144.4 |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |
Acknowledgements
The authors thank Professor P. Klüfers for generous allocation of diffractometer time.
References
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Derivatives of thiophene have shown promise in photovoltaic (Cheylan et al., 2006), liquid crystal (Kiryanov et al. 2001) and therapeutic applications (Seed et al., 2003). On the other hand, thiazole derivatives have been evaluated for biological activity (Karimian, 2009), especially against certain breast carcinoma cell lines (Shi et al. 1996).
In the present work the structure of 2-(5-benzo[d]thiazol-2-yl)thiophen-2-yl)benzo[d]thiazole has been determined to explore its suitability as a tridentate ligand for various metal ions.
The structure consists of a central thiophenyl ring and two terminal thiazolyl rings, with the two sulfur atoms of the latter rings in trans positions to the thiophenyl sulfur atom (see Fig. 1). The thiazolyl rings with S1 and S3 are approximately coplanar with the thiophenyl ring, with dihedral angles of 6.23 (11)° and 4.81 (11)° respectively. The dihedral angle between the two thiazolyl rings is 10.39 (8)°.
The bonding parameters illustrate that C8—C9 and C10—C11 bonds in the thiophenyl ring are localized double bonds (1.354 (5) and 1.358 (4) Å respectively), as are the N1—C7 and N2—C12 bonds (1.286 (4) and 1.308 (4) Å respectively).
Taking into account merely interactions with hydrogen-acceptor distances at least 0.1 Å shorter than the sum of van der Waals radii, the molecules are linked by weak interactions of the type C16—H16···N1, which lead to the formation of zig-zag-chains along [010] (see Fig. 2). The shortest distance in the parallel stacking of the molecules is 3.6371 (17) Å, observed for the planes through the thiophenyl ring and the phenyl ring (C13 to C18) of a neighboring molecule.