organic compounds
6-{[(Benzyloxy)carbonyl]oxy}-2-methylhexahydropyrano[3,2-d][1,3]dioxin-7,8-diyl bis(chloroacetate)
aDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA, bDepartment of Chemistry, Howard University, 525 College Street NW, Washington DC 20059, USA, cDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570006, India, dDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India, and eDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri 574 199, India
*Correspondence e-mail: jjasinski@keene.edu
The 20H22O10Cl2, consists of a 6-{[(benzyloxy)carbonyl]oxy}group and two chloroacetate groups bonded to a 2-methylhexahydropyrano[3,2-d][1,3]dioxin group at the carbon 1,2 and 3 positions, respectively, of a pyrano ring fused to a ring. The dihedral angle between the mean planes of the and benzyl rings is 42.2 (2)°. An extensive array of weak intermolecular C—H⋯O hydrogen bonds links the molecules into chains along [011]. Additional weak intermolecular C—H⋯π interactions occur between C—H atoms of the and benzyl rings and a nearby benzene ring. A MOPAC geometry optimization calculation in vacuo revealed that the dihedral angle between the mean planes of the and benzyl rings increased by 24.42 to 66.64°, suggesting that the weak intermolecular hydrogen-bonding interactions, in coordination with weak C—H⋯π interactions, influence the geometry of the resultant crystalline species and help to stabilize the crystal packing.
of the title compound, CRelated literature
For background to the title compound, see: Ernst & Derendorf, (1995); Ji et al. (1997); Sanford et al. (1990); Budavari (1989); Wrasidlo et al. (2002). For related structures, see: Shi & Wang, (2003); Wu et al. (2005); Zhou et al. (2005). For bond-length data, see: Allen et al. (1987). For puckering parameters, see: Cremer & Pople (1975). For MOPAC PM3 calculations, see: Schmidt & Polik, (2007).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536810004356/hg2627sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810004356/hg2627Isup2.hkl
The title compound was obtained as a gift sample from CAD Pharma, Bangalore, India. Suitable crystals were grown from methanol by slow evaporation (m.p.: 385-388 K).
All of the H atoms were placed in their calculated positions and then refined using the riding model with C—H = 0.95-1.00 Å, and with Uiso(H) = 1.18-1.49Ueq(C).
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis PRO (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of (I), C20H22O10Cl2, showing the atom labeling scheme and 50% probability displacement ellipsoids. | |
Fig. 2. The molecular packing for (I) viewed down the a axis. Dashed lines indicate weak C—H···O intermolecular hydrogen bond interactions which link the molecule into chains propagating along the [011]. |
C20H22Cl2O10 | F(000) = 1024 |
Mr = 493.28 | Dx = 1.388 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 8966 reflections |
a = 8.1780 (1) Å | θ = 4.8–32.5° |
b = 14.9165 (3) Å | µ = 0.33 mm−1 |
c = 19.3555 (4) Å | T = 200 K |
V = 2361.12 (7) Å3 | Prism, colorless |
Z = 4 | 0.44 × 0.34 × 0.27 mm |
Oxford Diffraction Gemini diffractometer | 5818 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 3677 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.049 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 28.3°, θmin = 4.9° |
ω scans | h = −10→10 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | k = −19→19 |
Tmin = 0.821, Tmax = 1.000 | l = −25→25 |
30676 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.084 | w = 1/[σ2(Fo2) + (0.0439P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.92 | (Δ/σ)max < 0.001 |
5818 reflections | Δρmax = 0.34 e Å−3 |
290 parameters | Δρmin = −0.23 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 2513 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.05 (5) |
C20H22Cl2O10 | V = 2361.12 (7) Å3 |
Mr = 493.28 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 8.1780 (1) Å | µ = 0.33 mm−1 |
b = 14.9165 (3) Å | T = 200 K |
c = 19.3555 (4) Å | 0.44 × 0.34 × 0.27 mm |
Oxford Diffraction Gemini diffractometer | 5818 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 3677 reflections with I > 2σ(I) |
Tmin = 0.821, Tmax = 1.000 | Rint = 0.049 |
30676 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.084 | Δρmax = 0.34 e Å−3 |
S = 0.92 | Δρmin = −0.23 e Å−3 |
5818 reflections | Absolute structure: Flack (1983), 2513 Friedel pairs |
290 parameters | Absolute structure parameter: 0.05 (5) |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.46237 (7) | 0.35551 (4) | 0.03846 (3) | 0.05778 (17) | |
Cl2 | 0.51793 (9) | 0.59375 (5) | 0.14719 (4) | 0.0793 (2) | |
O1 | 1.17773 (16) | 0.47514 (9) | 0.26910 (8) | 0.0450 (4) | |
O2 | 1.42110 (16) | 0.41973 (10) | 0.31523 (8) | 0.0520 (4) | |
O3 | 1.21358 (17) | 0.23957 (9) | 0.22343 (7) | 0.0377 (3) | |
O4 | 1.06875 (15) | 0.14810 (9) | 0.15336 (7) | 0.0371 (3) | |
O5 | 1.29642 (18) | 0.12683 (10) | 0.08848 (8) | 0.0456 (4) | |
O6 | 1.11749 (18) | 0.01657 (9) | 0.11327 (8) | 0.0452 (4) | |
O7 | 0.86643 (16) | 0.28806 (9) | 0.11292 (7) | 0.0376 (3) | |
O8 | 0.63005 (18) | 0.29606 (12) | 0.17188 (8) | 0.0542 (4) | |
O9 | 0.86234 (16) | 0.43867 (9) | 0.21585 (7) | 0.0366 (3) | |
O10 | 0.8181 (2) | 0.49330 (10) | 0.10897 (8) | 0.0553 (4) | |
C1 | 1.1148 (2) | 0.23894 (13) | 0.16396 (11) | 0.0346 (5) | |
H1A | 1.1759 | 0.2628 | 0.1232 | 0.042* | |
C2 | 0.9602 (2) | 0.29229 (13) | 0.17650 (10) | 0.0340 (4) | |
H2A | 0.8964 | 0.2650 | 0.2152 | 0.041* | |
C3 | 1.0049 (2) | 0.38910 (13) | 0.19405 (10) | 0.0354 (5) | |
H3A | 1.0567 | 0.4189 | 0.1533 | 0.043* | |
C4 | 1.1217 (2) | 0.38731 (13) | 0.25368 (11) | 0.0349 (5) | |
H4A | 1.0646 | 0.3623 | 0.2951 | 0.042* | |
C5 | 1.2792 (3) | 0.47197 (16) | 0.32884 (14) | 0.0512 (6) | |
H5A | 1.2172 | 0.4459 | 0.3686 | 0.061* | |
C6 | 1.3804 (3) | 0.32825 (15) | 0.29908 (12) | 0.0458 (6) | |
H6A | 1.3251 | 0.2997 | 0.3389 | 0.055* | |
H6B | 1.4808 | 0.2938 | 0.2885 | 0.055* | |
C7 | 1.2681 (2) | 0.32912 (13) | 0.23705 (11) | 0.0358 (5) | |
H7A | 1.3271 | 0.3535 | 0.1959 | 0.043* | |
C8 | 1.1749 (3) | 0.09907 (14) | 0.11513 (11) | 0.0367 (5) | |
C9 | 1.2170 (3) | −0.04574 (16) | 0.07276 (15) | 0.0623 (7) | |
H9A | 1.3284 | −0.0502 | 0.0924 | 0.075* | |
H9B | 1.2256 | −0.0250 | 0.0243 | 0.075* | |
C10 | 1.1332 (3) | −0.13444 (14) | 0.07586 (11) | 0.0418 (5) | |
C11 | 1.1874 (3) | −0.20073 (18) | 0.12047 (13) | 0.0600 (7) | |
H11A | 1.2783 | −0.1907 | 0.1500 | 0.072* | |
C12 | 1.1032 (5) | −0.2844 (2) | 0.12081 (18) | 0.0876 (11) | |
H12A | 1.1381 | −0.3321 | 0.1497 | 0.105* | |
C13 | 0.9681 (5) | −0.2943 (2) | 0.0776 (2) | 0.0910 (10) | |
H13A | 0.9089 | −0.3490 | 0.0780 | 0.109* | |
C14 | 0.9205 (5) | −0.2287 (3) | 0.03579 (19) | 0.0983 (11) | |
H14A | 0.8289 | −0.2372 | 0.0063 | 0.118* | |
C15 | 1.0007 (3) | −0.1510 (2) | 0.03498 (14) | 0.0686 (7) | |
H15A | 0.9640 | −0.1052 | 0.0046 | 0.082* | |
C16 | 0.7027 (3) | 0.28930 (13) | 0.11876 (11) | 0.0383 (5) | |
C17 | 0.6253 (3) | 0.27921 (16) | 0.04854 (12) | 0.0501 (6) | |
H17A | 0.5842 | 0.2172 | 0.0430 | 0.060* | |
H17B | 0.7084 | 0.2901 | 0.0123 | 0.060* | |
C18 | 0.7850 (3) | 0.48932 (14) | 0.16859 (13) | 0.0395 (5) | |
C19 | 0.6518 (3) | 0.54010 (16) | 0.20523 (12) | 0.0494 (6) | |
H19A | 0.7019 | 0.5856 | 0.2359 | 0.059* | |
H19B | 0.5886 | 0.4981 | 0.2345 | 0.059* | |
C20 | 1.3316 (3) | 0.56632 (18) | 0.34550 (18) | 0.0757 (9) | |
H20A | 1.4078 | 0.5654 | 0.3846 | 0.114* | |
H20B | 1.2354 | 0.6022 | 0.3576 | 0.114* | |
H20C | 1.3856 | 0.5927 | 0.3052 | 0.114* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0480 (3) | 0.0624 (4) | 0.0629 (4) | 0.0086 (3) | −0.0107 (3) | 0.0046 (3) |
Cl2 | 0.0861 (5) | 0.0687 (5) | 0.0832 (5) | 0.0365 (4) | −0.0317 (4) | −0.0064 (4) |
O1 | 0.0382 (8) | 0.0321 (8) | 0.0646 (10) | 0.0006 (7) | 0.0006 (7) | −0.0154 (7) |
O2 | 0.0352 (8) | 0.0465 (10) | 0.0741 (11) | 0.0012 (7) | −0.0012 (8) | −0.0234 (8) |
O3 | 0.0399 (7) | 0.0291 (8) | 0.0441 (8) | 0.0021 (6) | −0.0029 (7) | −0.0041 (6) |
O4 | 0.0384 (7) | 0.0287 (8) | 0.0441 (8) | 0.0000 (6) | 0.0061 (6) | −0.0039 (6) |
O5 | 0.0382 (8) | 0.0352 (8) | 0.0635 (10) | −0.0013 (7) | 0.0091 (7) | −0.0066 (7) |
O6 | 0.0512 (8) | 0.0281 (8) | 0.0564 (9) | −0.0049 (7) | 0.0165 (8) | −0.0094 (7) |
O7 | 0.0386 (8) | 0.0397 (9) | 0.0344 (8) | 0.0017 (6) | 0.0018 (7) | −0.0024 (7) |
O8 | 0.0422 (8) | 0.0779 (12) | 0.0426 (10) | 0.0057 (8) | 0.0049 (8) | −0.0066 (8) |
O9 | 0.0376 (7) | 0.0325 (8) | 0.0398 (8) | 0.0086 (6) | 0.0007 (7) | −0.0017 (6) |
O10 | 0.0732 (11) | 0.0471 (10) | 0.0457 (10) | 0.0091 (9) | 0.0007 (9) | 0.0060 (8) |
C1 | 0.0397 (11) | 0.0251 (11) | 0.0392 (12) | −0.0026 (9) | 0.0019 (9) | −0.0029 (9) |
C2 | 0.0346 (10) | 0.0354 (11) | 0.0321 (11) | 0.0014 (9) | 0.0026 (9) | 0.0019 (9) |
C3 | 0.0356 (11) | 0.0313 (11) | 0.0394 (12) | 0.0004 (9) | 0.0088 (9) | −0.0015 (9) |
C4 | 0.0332 (10) | 0.0308 (12) | 0.0406 (12) | −0.0038 (8) | 0.0047 (9) | −0.0039 (9) |
C5 | 0.0352 (11) | 0.0495 (14) | 0.0688 (16) | 0.0033 (10) | −0.0041 (12) | −0.0253 (12) |
C6 | 0.0400 (11) | 0.0456 (14) | 0.0519 (14) | 0.0027 (10) | 0.0004 (11) | −0.0110 (11) |
C7 | 0.0355 (10) | 0.0285 (11) | 0.0434 (13) | −0.0010 (9) | 0.0040 (9) | −0.0079 (9) |
C8 | 0.0413 (12) | 0.0301 (12) | 0.0388 (12) | 0.0017 (10) | −0.0051 (10) | −0.0039 (10) |
C9 | 0.0675 (15) | 0.0362 (14) | 0.0832 (18) | −0.0035 (12) | 0.0294 (15) | −0.0192 (13) |
C10 | 0.0482 (12) | 0.0330 (12) | 0.0441 (12) | 0.0022 (10) | 0.0056 (11) | −0.0114 (11) |
C11 | 0.0559 (14) | 0.0621 (19) | 0.0620 (16) | 0.0183 (14) | 0.0053 (13) | −0.0025 (14) |
C12 | 0.119 (3) | 0.0480 (19) | 0.096 (3) | 0.0332 (19) | 0.049 (2) | 0.0267 (17) |
C13 | 0.109 (3) | 0.051 (2) | 0.113 (3) | −0.030 (2) | 0.028 (3) | −0.024 (2) |
C14 | 0.119 (3) | 0.087 (3) | 0.089 (2) | −0.035 (2) | −0.008 (2) | −0.025 (2) |
C15 | 0.0832 (19) | 0.0692 (19) | 0.0534 (16) | −0.0104 (16) | −0.0070 (15) | −0.0092 (14) |
C16 | 0.0428 (12) | 0.0312 (12) | 0.0409 (13) | 0.0055 (10) | −0.0012 (11) | −0.0014 (10) |
C17 | 0.0548 (13) | 0.0468 (14) | 0.0489 (14) | 0.0091 (11) | −0.0107 (12) | −0.0084 (11) |
C18 | 0.0466 (12) | 0.0274 (11) | 0.0446 (14) | −0.0023 (10) | −0.0083 (11) | −0.0007 (10) |
C19 | 0.0518 (13) | 0.0403 (13) | 0.0562 (14) | 0.0130 (11) | −0.0099 (12) | −0.0024 (11) |
C20 | 0.0435 (13) | 0.0595 (18) | 0.124 (3) | 0.0071 (13) | −0.0108 (15) | −0.0508 (17) |
Cl1—C17 | 1.763 (2) | C5—H5A | 1.0000 |
Cl2—C19 | 1.761 (2) | C6—C7 | 1.512 (3) |
O1—C4 | 1.420 (2) | C6—H6A | 0.9900 |
O1—C5 | 1.424 (3) | C6—H6B | 0.9900 |
O2—C5 | 1.423 (2) | C7—H7A | 1.0000 |
O2—C6 | 1.439 (3) | C9—C10 | 1.491 (3) |
O3—C1 | 1.406 (2) | C9—H9A | 0.9900 |
O3—C7 | 1.433 (2) | C9—H9B | 0.9900 |
O4—C8 | 1.355 (2) | C10—C15 | 1.365 (3) |
O4—C1 | 1.421 (2) | C10—C11 | 1.386 (3) |
O5—C8 | 1.194 (2) | C11—C12 | 1.426 (4) |
O6—C8 | 1.318 (2) | C11—H11A | 0.9500 |
O6—C9 | 1.463 (3) | C12—C13 | 1.393 (5) |
O7—C16 | 1.343 (2) | C12—H12A | 0.9500 |
O7—C2 | 1.452 (2) | C13—C14 | 1.328 (5) |
O8—C16 | 1.192 (2) | C13—H13A | 0.9500 |
O9—C18 | 1.345 (3) | C14—C15 | 1.331 (4) |
O9—C3 | 1.444 (2) | C14—H14A | 0.9500 |
O10—C18 | 1.187 (3) | C15—H15A | 0.9500 |
C1—C2 | 1.513 (3) | C16—C17 | 1.507 (3) |
C1—H1A | 1.0000 | C17—H17A | 0.9900 |
C2—C3 | 1.528 (3) | C17—H17B | 0.9900 |
C2—H2A | 1.0000 | C18—C19 | 1.504 (3) |
C3—C4 | 1.499 (3) | C19—H19A | 0.9900 |
C3—H3A | 1.0000 | C19—H19B | 0.9900 |
C4—C7 | 1.513 (3) | C20—H20A | 0.9800 |
C4—H4A | 1.0000 | C20—H20B | 0.9800 |
C5—C20 | 1.506 (3) | C20—H20C | 0.9800 |
C4—O1—C5 | 109.16 (16) | O5—C8—O4 | 125.60 (19) |
C5—O2—C6 | 111.76 (15) | O6—C8—O4 | 106.92 (17) |
C1—O3—C7 | 109.60 (15) | O6—C9—C10 | 106.67 (18) |
C8—O4—C1 | 115.07 (15) | O6—C9—H9A | 110.4 |
C8—O6—C9 | 114.21 (17) | C10—C9—H9A | 110.4 |
C16—O7—C2 | 117.04 (15) | O6—C9—H9B | 110.4 |
C18—O9—C3 | 117.98 (16) | C10—C9—H9B | 110.4 |
O3—C1—O4 | 106.07 (15) | H9A—C9—H9B | 108.6 |
O3—C1—C2 | 110.18 (15) | C15—C10—C11 | 119.1 (2) |
O4—C1—C2 | 107.64 (14) | C15—C10—C9 | 120.2 (2) |
O3—C1—H1A | 110.9 | C11—C10—C9 | 120.8 (2) |
O4—C1—H1A | 110.9 | C10—C11—C12 | 118.2 (3) |
C2—C1—H1A | 110.9 | C10—C11—H11A | 120.9 |
O7—C2—C1 | 106.42 (15) | C12—C11—H11A | 120.9 |
O7—C2—C3 | 110.85 (15) | C13—C12—C11 | 118.2 (3) |
C1—C2—C3 | 109.45 (15) | C13—C12—H12A | 120.9 |
O7—C2—H2A | 110.0 | C11—C12—H12A | 120.9 |
C1—C2—H2A | 110.0 | C14—C13—C12 | 121.4 (3) |
C3—C2—H2A | 110.0 | C14—C13—H13A | 119.3 |
O9—C3—C4 | 107.40 (14) | C12—C13—H13A | 119.3 |
O9—C3—C2 | 110.87 (15) | C13—C14—C15 | 120.3 (4) |
C4—C3—C2 | 107.87 (15) | C13—C14—H14A | 119.9 |
O9—C3—H3A | 110.2 | C15—C14—H14A | 119.9 |
C4—C3—H3A | 110.2 | C14—C15—C10 | 122.8 (3) |
C2—C3—H3A | 110.2 | C14—C15—H15A | 118.6 |
O1—C4—C3 | 110.57 (16) | C10—C15—H15A | 118.6 |
O1—C4—C7 | 108.61 (15) | O8—C16—O7 | 124.80 (19) |
C3—C4—C7 | 110.53 (16) | O8—C16—C17 | 125.23 (19) |
O1—C4—H4A | 109.0 | O7—C16—C17 | 109.96 (19) |
C3—C4—H4A | 109.0 | C16—C17—Cl1 | 110.66 (16) |
C7—C4—H4A | 109.0 | C16—C17—H17A | 109.5 |
O2—C5—O1 | 110.07 (17) | Cl1—C17—H17A | 109.5 |
O2—C5—C20 | 108.63 (18) | C16—C17—H17B | 109.5 |
O1—C5—C20 | 108.0 (2) | Cl1—C17—H17B | 109.5 |
O2—C5—H5A | 110.0 | H17A—C17—H17B | 108.1 |
O1—C5—H5A | 110.0 | O10—C18—O9 | 125.6 (2) |
C20—C5—H5A | 110.0 | O10—C18—C19 | 126.8 (2) |
O2—C6—C7 | 107.76 (18) | O9—C18—C19 | 107.63 (19) |
O2—C6—H6A | 110.2 | C18—C19—Cl2 | 112.21 (17) |
C7—C6—H6A | 110.2 | C18—C19—H19A | 109.2 |
O2—C6—H6B | 110.2 | Cl2—C19—H19A | 109.2 |
C7—C6—H6B | 110.2 | C18—C19—H19B | 109.2 |
H6A—C6—H6B | 108.5 | Cl2—C19—H19B | 109.2 |
O3—C7—C6 | 109.09 (17) | H19A—C19—H19B | 107.9 |
O3—C7—C4 | 109.16 (15) | C5—C20—H20A | 109.5 |
C6—C7—C4 | 108.45 (17) | C5—C20—H20B | 109.5 |
O3—C7—H7A | 110.0 | H20A—C20—H20B | 109.5 |
C6—C7—H7A | 110.0 | C5—C20—H20C | 109.5 |
C4—C7—H7A | 110.0 | H20A—C20—H20C | 109.5 |
O5—C8—O6 | 127.48 (19) | H20B—C20—H20C | 109.5 |
C7—O3—C1—O4 | 178.93 (14) | O2—C6—C7—O3 | −174.90 (16) |
C7—O3—C1—C2 | −64.85 (19) | O2—C6—C7—C4 | −56.1 (2) |
C8—O4—C1—O3 | −87.73 (18) | O1—C4—C7—O3 | 178.26 (15) |
C8—O4—C1—C2 | 154.34 (16) | C3—C4—C7—O3 | −60.3 (2) |
C16—O7—C2—C1 | 148.00 (16) | O1—C4—C7—C6 | 59.5 (2) |
C16—O7—C2—C3 | −93.07 (19) | C3—C4—C7—C6 | −179.03 (16) |
O3—C1—C2—O7 | 179.99 (14) | C9—O6—C8—O5 | −0.7 (3) |
O4—C1—C2—O7 | −64.77 (19) | C9—O6—C8—O4 | 179.11 (18) |
O3—C1—C2—C3 | 60.1 (2) | C1—O4—C8—O5 | −3.1 (3) |
O4—C1—C2—C3 | 175.39 (14) | C1—O4—C8—O6 | 177.14 (15) |
C18—O9—C3—C4 | 145.41 (17) | C8—O6—C9—C10 | −179.41 (19) |
C18—O9—C3—C2 | −96.97 (19) | O6—C9—C10—C15 | 78.9 (3) |
O7—C2—C3—O9 | 71.06 (18) | O6—C9—C10—C11 | −100.5 (2) |
C1—C2—C3—O9 | −171.86 (16) | C15—C10—C11—C12 | 1.0 (3) |
O7—C2—C3—C4 | −171.62 (14) | C9—C10—C11—C12 | −179.6 (2) |
C1—C2—C3—C4 | −54.5 (2) | C10—C11—C12—C13 | −1.7 (4) |
C5—O1—C4—C3 | 175.95 (16) | C11—C12—C13—C14 | 1.6 (5) |
C5—O1—C4—C7 | −62.6 (2) | C12—C13—C14—C15 | −0.8 (6) |
O9—C3—C4—O1 | −64.92 (19) | C13—C14—C15—C10 | 0.1 (5) |
C2—C3—C4—O1 | 175.53 (15) | C11—C10—C15—C14 | −0.2 (4) |
O9—C3—C4—C7 | 174.79 (15) | C9—C10—C15—C14 | −179.6 (3) |
C2—C3—C4—C7 | 55.2 (2) | C2—O7—C16—O8 | 2.2 (3) |
C6—O2—C5—O1 | −62.2 (2) | C2—O7—C16—C17 | −176.82 (16) |
C6—O2—C5—C20 | 179.8 (2) | O8—C16—C17—Cl1 | 45.1 (3) |
C4—O1—C5—O2 | 63.6 (2) | O7—C16—C17—Cl1 | −135.95 (16) |
C4—O1—C5—C20 | −177.92 (18) | C3—O9—C18—O10 | 4.4 (3) |
C5—O2—C6—C7 | 58.2 (2) | C3—O9—C18—C19 | −174.89 (16) |
C1—O3—C7—C6 | −177.39 (16) | O10—C18—C19—Cl2 | 11.2 (3) |
C1—O3—C7—C4 | 64.27 (19) | O9—C18—C19—Cl2 | −169.47 (15) |
Cg3 is the centroid of the C10—C15 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6B···O8i | 0.99 | 2.57 | 3.235 (3) | 125 |
C13—H13A···O10ii | 0.95 | 2.54 | 3.452 (4) | 162 |
C17—H17B···O5iii | 0.99 | 2.42 | 3.310 (3) | 149 |
C19—H19A···O3iv | 0.99 | 2.52 | 3.460 (3) | 158 |
C19—H19B···O2v | 0.99 | 2.38 | 3.364 (3) | 170 |
C20—H20B···O4iv | 0.98 | 2.59 | 3.494 (3) | 154 |
C4—H4A···Cg3iv | 1.00 | 2.89 | 3.879 (2) | 171 |
C14—H14A···Cg3vi | 0.95 | 2.87 | 3.818 (4) | 173 |
Symmetry codes: (i) x+1, y, z; (ii) x, y−1, z; (iii) x−1/2, −y+1/2, −z; (iv) −x+2, y+1/2, −z+1/2; (v) x−1, y, z; (vi) x−1/2, −y−1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C20H22Cl2O10 |
Mr | 493.28 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 200 |
a, b, c (Å) | 8.1780 (1), 14.9165 (3), 19.3555 (4) |
V (Å3) | 2361.12 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.33 |
Crystal size (mm) | 0.44 × 0.34 × 0.27 |
Data collection | |
Diffractometer | Oxford Diffraction Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.821, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 30676, 5818, 3677 |
Rint | 0.049 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.084, 0.92 |
No. of reflections | 5818 |
No. of parameters | 290 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.23 |
Absolute structure | Flack (1983), 2513 Friedel pairs |
Absolute structure parameter | 0.05 (5) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Cg3 is the centroid of the C10—C15 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6B···O8i | 0.99 | 2.57 | 3.235 (3) | 124.7 |
C13—H13A···O10ii | 0.95 | 2.54 | 3.452 (4) | 161.5 |
C17—H17B···O5iii | 0.99 | 2.42 | 3.310 (3) | 149.2 |
C19—H19A···O3iv | 0.99 | 2.52 | 3.460 (3) | 157.5 |
C19—H19B···O2v | 0.99 | 2.38 | 3.364 (3) | 170.0 |
C20—H20B···O4iv | 0.98 | 2.59 | 3.494 (3) | 153.6 |
C4—H4A···Cg3iv | 1.00 | 2.89 | 3.879 (2) | 171 |
C14—H14A···Cg3vi | 0.95 | 2.87 | 3.818 (4) | 173 |
Symmetry codes: (i) x+1, y, z; (ii) x, y−1, z; (iii) x−1/2, −y+1/2, −z; (iv) −x+2, y+1/2, −z+1/2; (v) x−1, y, z; (vi) x−1/2, −y−1/2, −z. |
Acknowledgements
MTS thanks theUniversity of Mysore for use of their research facilities. RJB acknowledges the NSF MRI program (grant No. CHE-0619278) for funds to purchase an X-ray diffractometer.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound is an intermediate in the preparation of etoposide phosphate (Budavari, 1989), an inhibitor of the enzyme topoisomerase II. It is used as a form of chemotherapy for malignancies such as Ewing's sarcoma, lung cancer, testicular cancer, lymphoma, non-lymphocytic leukemia, and glioblastoma multiforme. It is often given in combination with other drugs. Chemically it derives from podophyllotoxin, a toxin found in the American Mayapple (Sanford et al., 1990; Ernst & Derendorf, 1995). Design, synthesis, and biological evaluation of novel etoposide analogs bearing pyrrolecarboxamidino group as DNA topoisomerase II inhibitors have been reported (Ji et al., 1997). Two 4'-propylcarbonoxy derivatives of etoposide were synthesized and evaluated as potential prodrugs for anticancer therapy (Wrasidlo et al., 2002). Structures of few derivatives of etoposide are published, viz, 10-hydroxy-1-oxoeremophila-7(11),8(9)-dien-12,8-olide (Wu et al., 2005), (5R,5aR,8aR,9S)-5-(3,4-dihydroxy-5-methoxyphenyl) -9-fluoro-5,8,8a,9-tetrahydrofuro[3',4':6,7]naphtho[2,3-d] -1,3-dioxol-6(5aH)-one acetone solvate (Zhou et al., 2005), (5aR,8aR,9R)-9-(3,4,5-trimethoxyphenyl)-5a,6,8a,9-tetrahydrofuro[3',4': 6,7]naphtho[2,3-d][1,3]dioxole-5,8-dione (Shi & Wang, 2003). In view of the importance of the title compound, C20H22Cl2O10, (I), a crystal structure is reported here.
The asymmetric unit of title compound, C20H22Cl2O10, (I), consists of a 6-{[(benzyloxy)carbonyl]oxy}group and two chloroacetate groups bonded to a 2-methylhexahydropyrano[3,2-d][1,3]dioxin group at the carbon 1,2 and 3 positions of the pyrano ring fused to a dioxin ring, respectively (Fig. 1). The fused [1,3]dioxin and 2-methylhexahydropyrano six-membered rings each adopt a slightly distorted normal chair configuration (Cremer & Pople, 1975) with puckering parameters Q, θ and ϕ of 0.598 (2) & 0.6025 (19) Å, 2.95 (19)° & 2.81 (18)°, and 33 (5)° & 357 (4)%, respectively (Fig. 2). For an ideal chair, θ has a value of 0 or 180°. The keto groups in each chloroacetate group are arranged in an antiparallel fashion (Torsion angles C2/O7/C16/C8 = 2.2 (3)°; C3/O9/C18/O10 = 4.4 (3)°) and nearly perpendicular to the benzene ring, while the keto group in the 6-{[(benzyloxy)carbonyl]oxy}group is somewhat diagonal to and bisecting the benzyl ring (torsion angle C1/O4/C8/O5 = -3.1 (3)°). The dihedral angle between the mean planes of the dioxin and benzene rings is 42.2 (2)°. An extensive array of intermolecular C—H···O hydrogen bonds exists which involves acceptor oxygen atoms from the three carbonyl groups, two oxygen atoms from the pyrano-dioxin rings, a keto oxygen atom in the 6-{[(benzyloxy)carbonyl]oxy}group, donor C—H atoms from an sp2 hybridized carbon in the benzene ring and sp3 hybridized carbon atoms from the dioxin ring, a methyl group and each chloroacetate group (Table 1). In addition, intermolecular C—H···Cg π-ring interactions also occur between C4—H4A and C14—H14A atoms of the dioxin and benzene rings and a nearby benzene ring (C4—H4A···Cg3 = 3.879 (2) Å (2-x, 1/2+y, 1/2- z) and C14—H14A···Cg3 = 3.818 (4) Å (-1/2+x, -1/2-y, -z), where Cg3 = ring centroid for C10—C15), respectively. Bond lengths and angles are all within expected ranges (Allen et al. 1987).
After a geometry optimized MOPAC PM3 computational calculation (Schmidt & Polik 2007) on (I), in vacuo, the dihedral angle between the mean planes of the dioxin and benzene rings became 66.64°, an increase of 24.42°. These observations support a suggestion that a collection of weak intermolecular forces influence the molecular conformation in the crystal and contribute to the packing of these molecules into chains propagating along the [011].