organic compounds
N′-[1-(5-Bromo-2-hydroxyphenyl)ethylidene]-3,4,5-trihydroxybenzohydrazide dimethyl sulfoxide solvate trihydrate
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and bDepartment of Molecular Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: khaledi@perdana.um.edu.my
The benzohydrazide molecule in the title compound, C15H13BrN2O5·C2H6OS·3H2O, is almost planar with an r.m.s. deviation for the non-H atoms of 0.078 Å. The organic molecules, water and dimethyl sulfoxide solvent molecules are linked by N—H⋯O, O—H⋯O and O—H⋯S intermolecular hydrogen bonds, forming zigzag chains along the a axis. Intramolecular O—H⋯O and O—H⋯N hydrogen bonds also occur.
Related literature
For the biological properties of 3,4,5-trihydroxybenzoic acid (gallic acid) derivatives, see: Arunkumar et al. (2006); Saxena et al. (2008). For the crystal structures of derived from 3,4,5-trihydroxybenzoylhydrazide, see: Abdul Alhadi et al. (2009); Khaledi et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810007002/hg2645sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810007002/hg2645Isup2.hkl
A mixture of 5-bromo-2-hydroxyacetophenone (2.15 g, 10 mmol) and 3,4,5-trihydroxybenzoylhydrazine(1.84 g, 10 mmol) was heated in ethanol (70 ml) for 3 h. The solution was then cooled and the solid product formed weas filtered off, washed with cold ethanol,and dried over silica gel. Crystals of the title compound were obtained by slow evaporation of a DMSO solution at room temperature.
C-bound hydrogen atoms were placed at calculated positions (C–H 0.95 Å), and were treated as riding on their parent carbon atoms, with U(H) set to 1.2Ueq(C). The nitrogen- and oxygen-bound H atoms were located in a difference Fourier map, and were refined with distance restraints of N–H 0.88±0.01 and O–H 0.84±0.02 Å.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of the title compound at 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius. | |
Fig. 2. Zigzag chain along α axis formed by intermolecular hydrogen bonding |
C15H13BrN2O5·C2H6OS·3H2O | F(000) = 2112 |
Mr = 513.36 | Dx = 1.621 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3053 reflections |
a = 21.5690 (15) Å | θ = 2.7–27.9° |
b = 7.0302 (4) Å | µ = 2.11 mm−1 |
c = 28.4771 (18) Å | T = 100 K |
β = 103.061 (2)° | Needle, colourless |
V = 4206.4 (5) Å3 | 0.26 × 0.03 × 0.03 mm |
Z = 8 |
Bruker APEXII CCD area-detector diffractometer | 3694 independent reflections |
Radiation source: fine-focus sealed tube | 3052 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
phi and ω scans | θmax = 25.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −25→25 |
Tmin = 0.610, Tmax = 0.940 | k = −8→5 |
9543 measured reflections | l = −33→33 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.066 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0311P)2 + 3.5353P] where P = (Fo2 + 2Fc2)/3 |
3694 reflections | (Δ/σ)max = 0.001 |
307 parameters | Δρmax = 0.34 e Å−3 |
11 restraints | Δρmin = −0.30 e Å−3 |
C15H13BrN2O5·C2H6OS·3H2O | V = 4206.4 (5) Å3 |
Mr = 513.36 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 21.5690 (15) Å | µ = 2.11 mm−1 |
b = 7.0302 (4) Å | T = 100 K |
c = 28.4771 (18) Å | 0.26 × 0.03 × 0.03 mm |
β = 103.061 (2)° |
Bruker APEXII CCD area-detector diffractometer | 3694 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3052 reflections with I > 2σ(I) |
Tmin = 0.610, Tmax = 0.940 | Rint = 0.030 |
9543 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 11 restraints |
wR(F2) = 0.066 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.34 e Å−3 |
3694 reflections | Δρmin = −0.30 e Å−3 |
307 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br | 0.525034 (11) | 1.15033 (4) | 1.066977 (9) | 0.01977 (9) | |
S | 0.15785 (3) | 0.18073 (10) | 0.73419 (2) | 0.02470 (17) | |
O1 | 0.25101 (8) | 1.0736 (3) | 1.07882 (6) | 0.0201 (4) | |
H1 | 0.2293 (12) | 1.052 (4) | 1.0519 (7) | 0.030* | |
O2 | 0.78049 (8) | 0.7413 (3) | 0.83940 (6) | 0.0205 (4) | |
H2A | 0.7527 (12) | 0.791 (4) | 0.8174 (8) | 0.031* | |
H2B | 0.7763 (14) | 0.801 (4) | 0.8636 (8) | 0.031* | |
O3 | 0.12345 (8) | 0.6895 (3) | 0.77600 (6) | 0.0193 (4) | |
H3A | 0.1436 (13) | 0.590 (3) | 0.7769 (11) | 0.029* | |
H3B | 0.1157 (13) | 0.721 (4) | 0.7481 (7) | 0.029* | |
O4 | 0.19398 (10) | 0.9307 (3) | 0.84748 (7) | 0.0382 (5) | |
H4A | 0.2210 (14) | 1.012 (4) | 0.8408 (12) | 0.057* | |
H4B | 0.1779 (16) | 0.866 (4) | 0.8207 (9) | 0.057* | |
O9 | 0.11275 (8) | 0.9528 (3) | 1.00576 (6) | 0.0188 (4) | |
O10 | 0.18508 (9) | 0.3495 (3) | 0.76525 (6) | 0.0288 (5) | |
O12 | 0.00733 (8) | 0.7056 (3) | 0.80056 (6) | 0.0302 (5) | |
H12 | 0.0426 (10) | 0.702 (5) | 0.7930 (11) | 0.045* | |
O13 | −0.10287 (8) | 0.7412 (3) | 0.82391 (6) | 0.0210 (4) | |
H13 | −0.1337 (11) | 0.749 (4) | 0.8352 (10) | 0.032* | |
O14 | −0.11122 (8) | 0.8463 (3) | 0.91444 (6) | 0.0213 (4) | |
H14 | −0.1073 (14) | 0.900 (4) | 0.9405 (7) | 0.032* | |
N1 | 0.22497 (9) | 0.9902 (3) | 0.99005 (7) | 0.0148 (5) | |
N2 | 0.17589 (9) | 0.9350 (3) | 0.95289 (7) | 0.0146 (5) | |
H2N | 0.1813 (11) | 0.933 (4) | 0.9235 (5) | 0.018* | |
C1 | 0.31207 (11) | 1.0888 (4) | 1.07379 (8) | 0.0156 (5) | |
C2 | 0.35764 (12) | 1.1406 (4) | 1.11456 (9) | 0.0186 (6) | |
H2 | 0.3452 | 1.1618 | 1.1441 | 0.022* | |
C3 | 0.42073 (11) | 1.1617 (4) | 1.11280 (9) | 0.0175 (6) | |
H3 | 0.4516 | 1.1992 | 1.1407 | 0.021* | |
C4 | 0.43828 (11) | 1.1272 (3) | 1.06974 (9) | 0.0156 (5) | |
C5 | 0.39418 (11) | 1.0743 (3) | 1.02900 (9) | 0.0150 (5) | |
H5 | 0.4074 | 1.0523 | 0.9998 | 0.018* | |
C6 | 0.32987 (11) | 1.0524 (3) | 1.02996 (8) | 0.0135 (5) | |
C7 | 0.28342 (11) | 0.9907 (3) | 0.98599 (8) | 0.0143 (5) | |
C8 | 0.30638 (12) | 0.9305 (4) | 0.94239 (9) | 0.0199 (6) | |
H8A | 0.2713 | 0.8716 | 0.9190 | 0.030* | |
H8B | 0.3411 | 0.8386 | 0.9519 | 0.030* | |
H8C | 0.3218 | 1.0420 | 0.9278 | 0.030* | |
C9 | 0.11782 (11) | 0.9227 (3) | 0.96425 (9) | 0.0148 (5) | |
C10 | 0.06185 (11) | 0.8702 (3) | 0.92563 (8) | 0.0131 (5) | |
C11 | 0.06462 (11) | 0.8147 (4) | 0.87924 (8) | 0.0157 (6) | |
H11 | 0.1045 | 0.8087 | 0.8703 | 0.019* | |
C12 | 0.00928 (12) | 0.7683 (4) | 0.84614 (8) | 0.0172 (6) | |
C13 | −0.04955 (11) | 0.7827 (4) | 0.85844 (8) | 0.0146 (5) | |
C14 | −0.05204 (11) | 0.8373 (4) | 0.90472 (8) | 0.0142 (5) | |
C15 | 0.00347 (11) | 0.8764 (3) | 0.93839 (9) | 0.0145 (5) | |
H15 | 0.0017 | 0.9078 | 0.9705 | 0.017* | |
C16 | 0.07421 (15) | 0.1949 (6) | 0.72909 (17) | 0.0685 (13) | |
H16A | 0.0645 | 0.1626 | 0.7601 | 0.103* | |
H16B | 0.0525 | 0.1053 | 0.7044 | 0.103* | |
H16C | 0.0596 | 0.3244 | 0.7199 | 0.103* | |
C17 | 0.15995 (19) | 0.2421 (5) | 0.67432 (11) | 0.0490 (10) | |
H17A | 0.1387 | 0.3648 | 0.6661 | 0.074* | |
H17B | 0.1380 | 0.1441 | 0.6522 | 0.074* | |
H17C | 0.2043 | 0.2514 | 0.6715 | 0.074* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br | 0.01221 (13) | 0.01949 (15) | 0.02680 (15) | −0.00176 (11) | 0.00269 (10) | −0.00108 (12) |
S | 0.0249 (4) | 0.0245 (4) | 0.0222 (4) | 0.0041 (3) | 0.0002 (3) | −0.0006 (3) |
O1 | 0.0126 (9) | 0.0320 (11) | 0.0155 (9) | −0.0023 (8) | 0.0028 (7) | −0.0048 (9) |
O2 | 0.0159 (10) | 0.0290 (12) | 0.0152 (9) | 0.0006 (8) | 0.0008 (8) | −0.0027 (8) |
O3 | 0.0213 (10) | 0.0236 (11) | 0.0122 (9) | 0.0033 (8) | 0.0024 (8) | 0.0000 (8) |
O4 | 0.0409 (13) | 0.0487 (15) | 0.0254 (11) | −0.0210 (11) | 0.0085 (10) | −0.0066 (11) |
O9 | 0.0167 (9) | 0.0261 (11) | 0.0130 (9) | −0.0026 (8) | 0.0022 (7) | −0.0036 (8) |
O10 | 0.0270 (10) | 0.0291 (11) | 0.0246 (10) | 0.0053 (9) | −0.0059 (8) | −0.0063 (9) |
O12 | 0.0153 (9) | 0.0640 (15) | 0.0116 (9) | −0.0023 (10) | 0.0038 (8) | −0.0127 (9) |
O13 | 0.0102 (9) | 0.0382 (12) | 0.0145 (9) | −0.0028 (9) | 0.0025 (7) | −0.0065 (9) |
O14 | 0.0132 (8) | 0.0364 (12) | 0.0155 (9) | −0.0028 (8) | 0.0058 (7) | −0.0116 (9) |
N1 | 0.0130 (11) | 0.0138 (11) | 0.0153 (11) | −0.0025 (9) | −0.0017 (8) | −0.0010 (9) |
N2 | 0.0137 (10) | 0.0193 (12) | 0.0102 (10) | −0.0011 (9) | 0.0011 (8) | −0.0016 (10) |
C1 | 0.0152 (13) | 0.0142 (13) | 0.0168 (13) | −0.0005 (10) | 0.0021 (10) | 0.0012 (11) |
C2 | 0.0199 (13) | 0.0199 (14) | 0.0160 (13) | −0.0009 (12) | 0.0040 (10) | −0.0032 (12) |
C3 | 0.0174 (13) | 0.0161 (14) | 0.0155 (12) | −0.0001 (11) | −0.0036 (10) | −0.0021 (11) |
C4 | 0.0116 (12) | 0.0113 (13) | 0.0236 (14) | −0.0015 (10) | 0.0033 (10) | 0.0012 (11) |
C5 | 0.0182 (13) | 0.0113 (13) | 0.0161 (13) | −0.0006 (11) | 0.0053 (10) | 0.0016 (11) |
C6 | 0.0161 (12) | 0.0098 (13) | 0.0138 (12) | 0.0018 (11) | 0.0020 (10) | 0.0010 (10) |
C7 | 0.0168 (13) | 0.0124 (13) | 0.0126 (12) | 0.0007 (10) | 0.0009 (10) | 0.0013 (10) |
C8 | 0.0169 (13) | 0.0268 (15) | 0.0157 (13) | −0.0021 (12) | 0.0028 (11) | −0.0017 (12) |
C9 | 0.0162 (13) | 0.0096 (13) | 0.0182 (13) | 0.0012 (11) | 0.0031 (10) | 0.0018 (11) |
C10 | 0.0148 (12) | 0.0088 (13) | 0.0152 (12) | 0.0000 (10) | 0.0021 (10) | 0.0013 (11) |
C11 | 0.0129 (12) | 0.0210 (15) | 0.0143 (12) | 0.0021 (11) | 0.0053 (10) | 0.0001 (11) |
C12 | 0.0195 (13) | 0.0204 (14) | 0.0116 (12) | 0.0007 (11) | 0.0034 (10) | −0.0012 (11) |
C13 | 0.0123 (12) | 0.0174 (14) | 0.0127 (12) | −0.0004 (10) | −0.0003 (10) | 0.0004 (11) |
C14 | 0.0137 (12) | 0.0131 (13) | 0.0166 (12) | −0.0017 (11) | 0.0051 (10) | −0.0011 (11) |
C15 | 0.0163 (12) | 0.0149 (14) | 0.0127 (12) | −0.0004 (11) | 0.0039 (10) | −0.0033 (11) |
C16 | 0.0242 (18) | 0.065 (3) | 0.112 (4) | −0.0043 (18) | 0.007 (2) | −0.042 (3) |
C17 | 0.084 (3) | 0.034 (2) | 0.0243 (16) | −0.009 (2) | 0.0029 (17) | −0.0009 (15) |
Br—C4 | 1.898 (2) | C2—H2 | 0.9500 |
S—O10 | 1.516 (2) | C3—C4 | 1.384 (3) |
S—C17 | 1.769 (3) | C3—H3 | 0.9500 |
S—C16 | 1.780 (3) | C4—C5 | 1.375 (3) |
O1—C1 | 1.361 (3) | C5—C6 | 1.402 (3) |
O1—H1 | 0.818 (17) | C5—H5 | 0.9500 |
O2—H2A | 0.839 (17) | C6—C7 | 1.481 (3) |
O2—H2B | 0.830 (17) | C7—C8 | 1.498 (3) |
O3—H3A | 0.823 (17) | C8—H8A | 0.9800 |
O3—H3B | 0.804 (17) | C8—H8B | 0.9800 |
O4—H4A | 0.867 (18) | C8—H8C | 0.9800 |
O4—H4B | 0.889 (18) | C9—C10 | 1.484 (3) |
O9—C9 | 1.230 (3) | C10—C15 | 1.388 (3) |
O12—C12 | 1.363 (3) | C10—C11 | 1.391 (3) |
O12—H12 | 0.837 (18) | C11—C12 | 1.383 (3) |
O13—C13 | 1.365 (3) | C11—H11 | 0.9500 |
O13—H13 | 0.803 (17) | C12—C13 | 1.394 (3) |
O14—C14 | 1.368 (3) | C13—C14 | 1.385 (3) |
O14—H14 | 0.821 (17) | C14—C15 | 1.382 (3) |
N1—C7 | 1.292 (3) | C15—H15 | 0.9500 |
N1—N2 | 1.373 (3) | C16—H16A | 0.9800 |
N2—C9 | 1.365 (3) | C16—H16B | 0.9800 |
N2—H2N | 0.870 (10) | C16—H16C | 0.9800 |
C1—C2 | 1.389 (3) | C17—H17A | 0.9800 |
C1—C6 | 1.410 (3) | C17—H17B | 0.9800 |
C2—C3 | 1.381 (3) | C17—H17C | 0.9800 |
O10—S—C17 | 106.27 (14) | H8A—C8—H8B | 109.5 |
O10—S—C16 | 104.83 (14) | C7—C8—H8C | 109.5 |
C17—S—C16 | 98.9 (2) | H8A—C8—H8C | 109.5 |
C1—O1—H1 | 106 (2) | H8B—C8—H8C | 109.5 |
H2A—O2—H2B | 103 (3) | O9—C9—N2 | 120.2 (2) |
H3A—O3—H3B | 105 (3) | O9—C9—C10 | 121.4 (2) |
H4A—O4—H4B | 107 (3) | N2—C9—C10 | 118.4 (2) |
C12—O12—H12 | 115 (2) | C15—C10—C11 | 119.6 (2) |
C13—O13—H13 | 110 (2) | C15—C10—C9 | 115.6 (2) |
C14—O14—H14 | 107 (2) | C11—C10—C9 | 124.8 (2) |
C7—N1—N2 | 122.0 (2) | C12—C11—C10 | 119.8 (2) |
C9—N2—N1 | 115.11 (19) | C12—C11—H11 | 120.1 |
C9—N2—H2N | 123.8 (17) | C10—C11—H11 | 120.1 |
N1—N2—H2N | 119.9 (17) | O12—C12—C11 | 124.2 (2) |
O1—C1—C2 | 116.8 (2) | O12—C12—C13 | 115.4 (2) |
O1—C1—C6 | 122.9 (2) | C11—C12—C13 | 120.4 (2) |
C2—C1—C6 | 120.3 (2) | O13—C13—C14 | 122.5 (2) |
C3—C2—C1 | 121.0 (2) | O13—C13—C12 | 118.0 (2) |
C3—C2—H2 | 119.5 | C14—C13—C12 | 119.5 (2) |
C1—C2—H2 | 119.5 | O14—C14—C15 | 123.5 (2) |
C2—C3—C4 | 118.8 (2) | O14—C14—C13 | 116.4 (2) |
C2—C3—H3 | 120.6 | C15—C14—C13 | 120.1 (2) |
C4—C3—H3 | 120.6 | C14—C15—C10 | 120.5 (2) |
C5—C4—C3 | 121.3 (2) | C14—C15—H15 | 119.8 |
C5—C4—Br | 119.25 (18) | C10—C15—H15 | 119.8 |
C3—C4—Br | 119.44 (18) | S—C16—H16A | 109.5 |
C4—C5—C6 | 120.8 (2) | S—C16—H16B | 109.5 |
C4—C5—H5 | 119.6 | H16A—C16—H16B | 109.5 |
C6—C5—H5 | 119.6 | S—C16—H16C | 109.5 |
C5—C6—C1 | 117.8 (2) | H16A—C16—H16C | 109.5 |
C5—C6—C7 | 119.9 (2) | H16B—C16—H16C | 109.5 |
C1—C6—C7 | 122.3 (2) | S—C17—H17A | 109.5 |
N1—C7—C6 | 114.4 (2) | S—C17—H17B | 109.5 |
N1—C7—C8 | 125.8 (2) | H17A—C17—H17B | 109.5 |
C6—C7—C8 | 119.8 (2) | S—C17—H17C | 109.5 |
C7—C8—H8A | 109.5 | H17A—C17—H17C | 109.5 |
C7—C8—H8B | 109.5 | H17B—C17—H17C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.82 (2) | 1.80 (2) | 2.531 (3) | 149 (3) |
O1—H1···O9 | 0.82 (2) | 2.65 (2) | 3.338 (2) | 142 (3) |
O2—H2A···O10i | 0.84 (2) | 1.88 (2) | 2.703 (2) | 168 (3) |
O2—H2A···Si | 0.84 (2) | 2.86 (2) | 3.5458 (19) | 140 (2) |
O2—H2B···O1ii | 0.83 (2) | 2.06 (2) | 2.880 (2) | 169 (3) |
O3—H3A···O10 | 0.82 (2) | 1.97 (2) | 2.785 (3) | 169 (3) |
O3—H3B···O13iii | 0.80 (2) | 2.01 (2) | 2.802 (2) | 168 (3) |
O4—H4A···O2iv | 0.87 (2) | 2.07 (2) | 2.915 (3) | 166 (3) |
O4—H4B···O3 | 0.89 (2) | 1.96 (2) | 2.817 (3) | 160 (3) |
O12—H12···O3 | 0.84 (2) | 1.91 (2) | 2.751 (2) | 179 (3) |
O13—H13···O2v | 0.80 (2) | 1.88 (2) | 2.651 (2) | 160 (3) |
O13—H13···O14 | 0.80 (2) | 2.30 (3) | 2.727 (2) | 114 (2) |
O14—H14···O9vi | 0.82 (2) | 1.87 (2) | 2.682 (2) | 169 (3) |
N2—H2N···O4 | 0.87 (1) | 2.24 (1) | 3.113 (3) | 179 (3) |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) −x+1, −y+2, −z+2; (iii) −x, y, −z+3/2; (iv) x−1/2, y+1/2, z; (v) x−1, y, z; (vi) −x, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C15H13BrN2O5·C2H6OS·3H2O |
Mr | 513.36 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 21.5690 (15), 7.0302 (4), 28.4771 (18) |
β (°) | 103.061 (2) |
V (Å3) | 4206.4 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 2.11 |
Crystal size (mm) | 0.26 × 0.03 × 0.03 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.610, 0.940 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9543, 3694, 3052 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.066, 1.02 |
No. of reflections | 3694 |
No. of parameters | 307 |
No. of restraints | 11 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.34, −0.30 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.818 (17) | 1.80 (2) | 2.531 (3) | 149 (3) |
O1—H1···O9 | 0.818 (17) | 2.65 (2) | 3.338 (2) | 142 (3) |
O2—H2A···O10i | 0.839 (17) | 1.877 (18) | 2.703 (2) | 168 (3) |
O2—H2A···Si | 0.839 (17) | 2.86 (2) | 3.5458 (19) | 140 (2) |
O2—H2B···O1ii | 0.830 (17) | 2.060 (18) | 2.880 (2) | 169 (3) |
O3—H3A···O10 | 0.823 (17) | 1.973 (18) | 2.785 (3) | 169 (3) |
O3—H3B···O13iii | 0.804 (17) | 2.012 (18) | 2.802 (2) | 168 (3) |
O4—H4A···O2iv | 0.867 (18) | 2.07 (2) | 2.915 (3) | 166 (3) |
O4—H4B···O3 | 0.889 (18) | 1.96 (2) | 2.817 (3) | 160 (3) |
O12—H12···O3 | 0.837 (18) | 1.913 (18) | 2.751 (2) | 179 (3) |
O13—H13···O2v | 0.803 (17) | 1.883 (19) | 2.651 (2) | 160 (3) |
O13—H13···O14 | 0.803 (17) | 2.30 (3) | 2.727 (2) | 114 (2) |
O14—H14···O9vi | 0.821 (17) | 1.871 (18) | 2.682 (2) | 169 (3) |
N2—H2N···O4 | 0.870 (10) | 2.243 (10) | 3.113 (3) | 179 (3) |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) −x+1, −y+2, −z+2; (iii) −x, y, −z+3/2; (iv) x−1/2, y+1/2, z; (v) x−1, y, z; (vi) −x, −y+2, −z+2. |
Acknowledgements
The authors thank the University of Malaya for funding this study (UMRG grant No. RG136/09HTM).
References
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