metal-organic compounds
Poly[[aqua[μ-1,4-bis(3-pyridylmethyl)piperazine-κ2N:N′](μ-isophthalato-κ2O1:O3)copper(II)]
aLyman Briggs College, Department of Chemistry, Michigan State University, East Lansing, MI 48825 USA
*Correspondence e-mail: laduca@msu.edu
In the title compound, [Cu(C8H4O4)(C16H20N4)(H2O)]n, square-pyramidally coordinated CuII ions are linked into [Cu(H2O)(isophthalate)]n coordination polymer chains by isophthalate dianions. These chains are connected into undulating [Cu(H2O)(isophthalate)(3-bpmp)]n [3-bmp is bis(3-pyridylmethyl)piperazine] layers by 3-bpmp tethering ligands. The pseudo three-dimensional structure of the title compound is fostered by interlayer O—H⋯O hydrogen bonding between the aqua ligands and unligated isophthalate O atoms. The selected crystal was non-merohedrally twinned. Only reflections from the major twin component were used in the solution and refinement.
Related literature
For other divalent copper aromatic dicarboxylate coordination polymers containing bis(3-pyridylmethyl)piperazine, see: Johnston et al. (2008). For the synthesis of bis(3-pyridylmethyl)piperazine, see: Pocic et al. (2005). The was determined using CELLNOW (Sheldrick, 2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Crystal Maker (Palmer, 2007); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053681000632X/ng2734sup1.cif
contains datablocks I, pub. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681000632X/ng2734Isup2.hkl
All starting materials were obtained commercially, except for 3-bpmp, which was prepared according to a literature procedure (Pocic, et al., 2005). A mixture of Cu(NO3)2.2.5H2O (72 mg, 0.30 mmol), isophthalic acid (49 mg, 0.30 mmol), and 3-bpmp (79 mg, 0.30 mmol) and 10.0 g water (550 mmol) was placed into a 15 ml borosilicate glass vial, which was then sealed and heated under autogenous pressure at 363 K for 120 h. Blue-green blocks of the title compound were obtained along with a green polycrystalline material.
All H atoms bound to C atoms were placed in calculated positions, with C—H = 0.95 - 0.99 Å, and refined in riding mode with Uiso = 1.2Ueq(C). The H atoms bound to the aqua ligand O atom was found in a difference Fourier map, restrained with O—H = 0.85 Å, and refined with Uiso =1.2Ueq(O).
Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Crystal Maker (Palmer, 2007); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Cu(C8H4O4)(C16H20N4)(H2O)] | Z = 2 |
Mr = 514.03 | F(000) = 534 |
Triclinic, P1 | Dx = 1.498 Mg m−3 |
a = 6.9122 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.0328 (5) Å | Cell parameters from 4141 reflections |
c = 16.7456 (9) Å | θ = 1.2–25.3° |
α = 86.822 (1)° | µ = 1.00 mm−1 |
β = 84.210 (1)° | T = 173 K |
γ = 80.771 (1)° | Block, blue-green |
V = 1139.49 (11) Å3 | 0.34 × 0.18 × 0.17 mm |
Bruker APEXII diffractometer | 4141 independent reflections |
Radiation source: fine-focus sealed tube | 3681 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.077 |
ω–ϕ scans | θmax = 25.3°, θmin = 1.2° |
Absorption correction: multi-scan (TWINABS; Sheldrick, 2003) | h = −8→8 |
Tmin = 0.729, Tmax = 0.850 | k = −11→12 |
31818 measured reflections | l = 0→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | w = 1/[σ2(Fo2) + (0.038P)2 + 0.3004P] where P = (Fo2 + 2Fc2)/3 |
4141 reflections | (Δ/σ)max < 0.001 |
313 parameters | Δρmax = 0.44 e Å−3 |
3 restraints | Δρmin = −0.56 e Å−3 |
[Cu(C8H4O4)(C16H20N4)(H2O)] | γ = 80.771 (1)° |
Mr = 514.03 | V = 1139.49 (11) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.9122 (4) Å | Mo Kα radiation |
b = 10.0328 (5) Å | µ = 1.00 mm−1 |
c = 16.7456 (9) Å | T = 173 K |
α = 86.822 (1)° | 0.34 × 0.18 × 0.17 mm |
β = 84.210 (1)° |
Bruker APEXII diffractometer | 4141 independent reflections |
Absorption correction: multi-scan (TWINABS; Sheldrick, 2003) | 3681 reflections with I > 2σ(I) |
Tmin = 0.729, Tmax = 0.850 | Rint = 0.077 |
31818 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 3 restraints |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | Δρmax = 0.44 e Å−3 |
4141 reflections | Δρmin = −0.56 e Å−3 |
313 parameters |
Experimental. The selected crystal was non-merohedrally twinned. The twin law was determined using CELLNOW (Sheldrick, 2009). Only reflections from the major twin component were used in the solution and refinement. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.06345 (5) | 0.16501 (3) | 0.247474 (17) | 0.03608 (14) | |
O1 | −0.2554 (3) | 0.07048 (19) | 0.26910 (13) | 0.0497 (5) | |
O2 | −0.0541 (3) | −0.64683 (17) | 0.24333 (11) | 0.0407 (4) | |
O3 | 0.1918 (3) | −0.53485 (19) | 0.26226 (12) | 0.0481 (5) | |
O4 | 0.0528 (3) | −0.03315 (17) | 0.25491 (10) | 0.0378 (4) | |
O5 | 0.3884 (3) | 0.2070 (2) | 0.22304 (13) | 0.0468 (5) | |
H5A | 0.489 (4) | 0.165 (3) | 0.2398 (18) | 0.056* | |
H5B | 0.362 (5) | 0.2875 (19) | 0.2338 (19) | 0.056* | |
N1 | −0.2981 (4) | 0.4364 (2) | −0.00903 (14) | 0.0450 (6) | |
N2 | −0.3058 (4) | 0.4306 (2) | 0.50868 (14) | 0.0459 (6) | |
N3 | 0.0735 (3) | 0.1569 (2) | 0.12699 (13) | 0.0369 (5) | |
N4 | 0.0851 (3) | 0.1613 (2) | 0.36631 (13) | 0.0364 (5) | |
C1 | −0.1526 (5) | 0.3472 (3) | 0.55036 (17) | 0.0522 (7) | |
H1A | −0.2147 | 0.2988 | 0.5967 | 0.063* | |
H1B | −0.0697 | 0.4063 | 0.5715 | 0.063* | |
C2 | −0.1293 (5) | 0.3582 (3) | −0.05256 (17) | 0.0543 (8) | |
H2A | −0.0398 | 0.4206 | −0.0763 | 0.065* | |
H2B | −0.1754 | 0.3150 | −0.0973 | 0.065* | |
C3 | 0.1232 (4) | 0.1509 (3) | −0.03844 (18) | 0.0516 (7) | |
H3 | 0.1412 | 0.1486 | −0.0954 | 0.062* | |
C4 | −0.4673 (4) | 0.3578 (3) | 0.49701 (18) | 0.0492 (7) | |
H4A | −0.5319 | 0.3322 | 0.5498 | 0.059* | |
H4B | −0.4150 | 0.2741 | 0.4683 | 0.059* | |
C5 | 0.2344 (4) | 0.0554 (3) | 0.00767 (18) | 0.0505 (7) | |
H5 | 0.3287 | −0.0133 | −0.0168 | 0.061* | |
C6 | −0.4586 (4) | 0.3589 (3) | 0.01158 (18) | 0.0486 (7) | |
H6A | −0.4119 | 0.2774 | 0.0446 | 0.058* | |
H6B | −0.5022 | 0.3290 | −0.0381 | 0.058* | |
C7 | −0.0140 (4) | 0.2497 (3) | −0.00209 (17) | 0.0447 (7) | |
C8 | −0.3847 (4) | 0.5539 (3) | 0.55103 (17) | 0.0471 (7) | |
H8A | −0.2761 | 0.6037 | 0.5592 | 0.056* | |
H8B | −0.4486 | 0.5304 | 0.6044 | 0.056* | |
C9 | −0.3711 (4) | 0.5567 (3) | −0.05738 (17) | 0.0490 (7) | |
H9A | −0.4137 | 0.5290 | −0.1078 | 0.059* | |
H9B | −0.2640 | 0.6109 | −0.0716 | 0.059* | |
C10 | 0.1134 (5) | 0.1464 (3) | 0.53032 (18) | 0.0484 (7) | |
H10 | 0.1234 | 0.1402 | 0.5866 | 0.058* | |
C11 | −0.0233 (4) | 0.2453 (3) | 0.49772 (16) | 0.0429 (6) | |
C12 | −0.3987 (4) | −0.1727 (3) | 0.24824 (15) | 0.0399 (6) | |
H12 | −0.4912 | −0.0917 | 0.2477 | 0.048* | |
C13 | 0.2053 (4) | 0.0623 (3) | 0.09015 (17) | 0.0444 (6) | |
H13 | 0.2822 | −0.0029 | 0.1221 | 0.053* | |
C14 | −0.1298 (4) | −0.4115 (3) | 0.25201 (14) | 0.0351 (6) | |
C15 | −0.3263 (4) | −0.4149 (3) | 0.24274 (17) | 0.0422 (6) | |
H15 | −0.3696 | −0.4990 | 0.2377 | 0.051* | |
C16 | 0.2351 (4) | 0.0567 (3) | 0.48069 (18) | 0.0478 (7) | |
H16 | 0.3297 | −0.0113 | 0.5024 | 0.057* | |
C17 | −0.4595 (4) | −0.2960 (3) | 0.24079 (17) | 0.0438 (6) | |
H17 | −0.5936 | −0.2992 | 0.2343 | 0.053* | |
C18 | −0.0310 (4) | 0.2481 (3) | 0.41507 (16) | 0.0395 (6) | |
H18 | −0.1241 | 0.3154 | 0.3918 | 0.047* | |
C19 | −0.1320 (4) | −0.0336 (3) | 0.26089 (15) | 0.0378 (6) | |
C20 | −0.2003 (4) | −0.1679 (2) | 0.25656 (14) | 0.0339 (5) | |
C21 | 0.2174 (4) | 0.0674 (3) | 0.39949 (17) | 0.0431 (6) | |
H21 | 0.3021 | 0.0059 | 0.3655 | 0.052* | |
C22 | −0.0351 (4) | 0.2482 (3) | 0.08150 (16) | 0.0387 (6) | |
H22 | −0.1307 | 0.3146 | 0.1075 | 0.046* | |
C23 | −0.0687 (4) | −0.2874 (3) | 0.25844 (15) | 0.0354 (6) | |
H23 | 0.0658 | −0.2846 | 0.2642 | 0.042* | |
C24 | 0.0186 (4) | −0.5397 (3) | 0.25266 (14) | 0.0372 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0415 (2) | 0.0285 (2) | 0.0384 (2) | −0.00438 (14) | −0.00604 (14) | −0.00113 (13) |
O1 | 0.0404 (11) | 0.0330 (10) | 0.0747 (14) | 0.0028 (9) | −0.0121 (10) | −0.0069 (9) |
O2 | 0.0470 (11) | 0.0290 (9) | 0.0466 (11) | −0.0040 (8) | −0.0094 (8) | −0.0024 (8) |
O3 | 0.0392 (11) | 0.0355 (11) | 0.0691 (13) | −0.0008 (8) | −0.0099 (9) | −0.0049 (9) |
O4 | 0.0375 (11) | 0.0304 (9) | 0.0458 (10) | −0.0047 (8) | −0.0059 (8) | −0.0023 (8) |
O5 | 0.0368 (11) | 0.0431 (11) | 0.0589 (12) | 0.0013 (9) | −0.0076 (9) | −0.0044 (10) |
N1 | 0.0413 (13) | 0.0499 (14) | 0.0436 (13) | −0.0085 (11) | −0.0062 (10) | 0.0074 (11) |
N2 | 0.0458 (14) | 0.0469 (14) | 0.0449 (13) | −0.0048 (11) | −0.0044 (10) | −0.0075 (11) |
N3 | 0.0350 (12) | 0.0339 (12) | 0.0426 (12) | −0.0071 (9) | −0.0040 (9) | −0.0024 (9) |
N4 | 0.0352 (12) | 0.0328 (11) | 0.0418 (12) | −0.0066 (9) | −0.0056 (9) | 0.0016 (9) |
C1 | 0.0559 (19) | 0.0586 (19) | 0.0410 (15) | −0.0030 (15) | −0.0063 (13) | −0.0072 (13) |
C2 | 0.0533 (19) | 0.066 (2) | 0.0407 (16) | −0.0018 (16) | −0.0055 (13) | 0.0061 (14) |
C3 | 0.0456 (17) | 0.067 (2) | 0.0419 (16) | −0.0055 (15) | −0.0038 (13) | −0.0053 (14) |
C4 | 0.0495 (18) | 0.0454 (16) | 0.0527 (17) | −0.0073 (14) | −0.0024 (13) | −0.0080 (13) |
C5 | 0.0420 (16) | 0.0569 (19) | 0.0507 (17) | −0.0013 (14) | −0.0009 (13) | −0.0115 (14) |
C6 | 0.0517 (18) | 0.0451 (16) | 0.0506 (16) | −0.0115 (14) | −0.0112 (13) | 0.0081 (13) |
C7 | 0.0392 (15) | 0.0537 (18) | 0.0421 (15) | −0.0096 (13) | −0.0056 (12) | 0.0015 (13) |
C8 | 0.0461 (17) | 0.0499 (17) | 0.0462 (16) | −0.0089 (13) | −0.0024 (13) | −0.0101 (13) |
C9 | 0.0476 (17) | 0.0522 (18) | 0.0477 (16) | −0.0113 (14) | −0.0086 (13) | 0.0127 (13) |
C10 | 0.0508 (18) | 0.0531 (18) | 0.0429 (15) | −0.0105 (14) | −0.0099 (13) | 0.0021 (13) |
C11 | 0.0417 (15) | 0.0468 (16) | 0.0413 (15) | −0.0095 (13) | −0.0055 (12) | −0.0004 (12) |
C12 | 0.0352 (14) | 0.0391 (15) | 0.0431 (15) | 0.0011 (11) | −0.0025 (11) | −0.0034 (11) |
C13 | 0.0416 (16) | 0.0442 (16) | 0.0472 (16) | −0.0043 (12) | −0.0062 (12) | −0.0029 (12) |
C14 | 0.0395 (14) | 0.0354 (14) | 0.0304 (12) | −0.0058 (11) | −0.0024 (10) | −0.0013 (10) |
C15 | 0.0434 (16) | 0.0361 (14) | 0.0478 (15) | −0.0091 (12) | −0.0020 (12) | −0.0037 (12) |
C16 | 0.0427 (16) | 0.0483 (17) | 0.0521 (17) | −0.0059 (13) | −0.0116 (13) | 0.0102 (13) |
C17 | 0.0337 (14) | 0.0458 (16) | 0.0531 (16) | −0.0079 (12) | −0.0056 (12) | −0.0040 (12) |
C18 | 0.0405 (15) | 0.0362 (14) | 0.0412 (14) | −0.0047 (12) | −0.0045 (11) | −0.0001 (11) |
C19 | 0.0414 (15) | 0.0341 (14) | 0.0376 (13) | −0.0021 (12) | −0.0095 (11) | −0.0004 (11) |
C20 | 0.0380 (14) | 0.0312 (13) | 0.0321 (12) | −0.0039 (11) | −0.0030 (10) | −0.0009 (10) |
C21 | 0.0402 (15) | 0.0407 (15) | 0.0476 (15) | −0.0033 (12) | −0.0045 (12) | −0.0018 (12) |
C22 | 0.0395 (15) | 0.0373 (14) | 0.0395 (14) | −0.0068 (12) | −0.0041 (11) | −0.0015 (11) |
C23 | 0.0350 (14) | 0.0358 (14) | 0.0352 (13) | −0.0035 (11) | −0.0050 (10) | −0.0023 (10) |
C24 | 0.0448 (16) | 0.0319 (14) | 0.0338 (13) | −0.0031 (12) | −0.0028 (11) | −0.0012 (10) |
Cu1—O2i | 1.9322 (18) | C5—H5 | 0.9500 |
Cu1—O4 | 1.9978 (18) | C6—C9iii | 1.503 (4) |
Cu1—N4 | 2.009 (2) | C6—H6A | 0.9900 |
Cu1—N3 | 2.017 (2) | C6—H6B | 0.9900 |
Cu1—O5 | 2.343 (2) | C7—C22 | 1.392 (4) |
O1—C19 | 1.242 (3) | C8—C4ii | 1.508 (4) |
O2—C24 | 1.280 (3) | C8—H8A | 0.9900 |
O3—C24 | 1.233 (3) | C8—H8B | 0.9900 |
O4—C19 | 1.272 (3) | C9—C6iii | 1.503 (4) |
O5—H5A | 0.820 (18) | C9—H9A | 0.9900 |
O5—H5B | 0.825 (17) | C9—H9B | 0.9900 |
N1—C2 | 1.451 (4) | C10—C16 | 1.380 (4) |
N1—C6 | 1.458 (4) | C10—C11 | 1.385 (4) |
N1—C9 | 1.465 (3) | C10—H10 | 0.9500 |
N2—C1 | 1.452 (4) | C11—C18 | 1.389 (4) |
N2—C8 | 1.461 (4) | C12—C17 | 1.384 (4) |
N2—C4 | 1.462 (4) | C12—C20 | 1.401 (4) |
N3—C13 | 1.337 (4) | C12—H12 | 0.9500 |
N3—C22 | 1.341 (3) | C13—H13 | 0.9500 |
N4—C18 | 1.338 (3) | C14—C15 | 1.389 (4) |
N4—C21 | 1.342 (3) | C14—C23 | 1.390 (4) |
C1—C11 | 1.506 (4) | C14—C24 | 1.511 (4) |
C1—H1A | 0.9900 | C15—C17 | 1.386 (4) |
C1—H1B | 0.9900 | C15—H15 | 0.9500 |
C2—C7 | 1.513 (4) | C16—C21 | 1.374 (4) |
C2—H2A | 0.9900 | C16—H16 | 0.9500 |
C2—H2B | 0.9900 | C17—H17 | 0.9500 |
C3—C7 | 1.379 (4) | C18—H18 | 0.9500 |
C3—C5 | 1.381 (4) | C19—C20 | 1.505 (4) |
C3—H3 | 0.9500 | C20—C23 | 1.385 (4) |
C4—C8ii | 1.508 (4) | C21—H21 | 0.9500 |
C4—H4A | 0.9900 | C22—H22 | 0.9500 |
C4—H4B | 0.9900 | C23—H23 | 0.9500 |
C5—C13 | 1.380 (4) | ||
O2i—Cu1—O4 | 153.48 (8) | C22—C7—C2 | 122.2 (3) |
O2i—Cu1—N4 | 93.47 (8) | N2—C8—C4ii | 110.0 (2) |
O4—Cu1—N4 | 89.57 (8) | N2—C8—H8A | 109.7 |
O2i—Cu1—N3 | 91.23 (8) | C4ii—C8—H8A | 109.7 |
O4—Cu1—N3 | 88.28 (8) | N2—C8—H8B | 109.7 |
N4—Cu1—N3 | 173.41 (8) | C4ii—C8—H8B | 109.7 |
O2i—Cu1—O5 | 95.11 (8) | H8A—C8—H8B | 108.2 |
O4—Cu1—O5 | 111.24 (7) | N1—C9—C6iii | 110.4 (2) |
N4—Cu1—O5 | 90.05 (8) | N1—C9—H9A | 109.6 |
N3—Cu1—O5 | 84.93 (8) | C6iii—C9—H9A | 109.6 |
C24—O2—Cu1iv | 130.85 (17) | N1—C9—H9B | 109.6 |
C19—O4—Cu1 | 101.25 (15) | C6iii—C9—H9B | 109.6 |
Cu1—O5—H5A | 129 (2) | H9A—C9—H9B | 108.1 |
Cu1—O5—H5B | 95 (2) | C16—C10—C11 | 119.7 (3) |
H5A—O5—H5B | 116 (3) | C16—C10—H10 | 120.1 |
C2—N1—C6 | 112.3 (2) | C11—C10—H10 | 120.1 |
C2—N1—C9 | 110.0 (2) | C10—C11—C18 | 117.2 (3) |
C6—N1—C9 | 108.5 (2) | C10—C11—C1 | 120.6 (3) |
C1—N2—C8 | 111.6 (2) | C18—C11—C1 | 122.1 (2) |
C1—N2—C4 | 112.1 (2) | C17—C12—C20 | 119.7 (2) |
C8—N2—C4 | 109.2 (2) | C17—C12—H12 | 120.1 |
C13—N3—C22 | 118.3 (2) | C20—C12—H12 | 120.1 |
C13—N3—Cu1 | 118.38 (18) | N3—C13—C5 | 122.7 (3) |
C22—N3—Cu1 | 123.13 (18) | N3—C13—H13 | 118.7 |
C18—N4—C21 | 117.8 (2) | C5—C13—H13 | 118.7 |
C18—N4—Cu1 | 122.48 (18) | C15—C14—C23 | 119.1 (2) |
C21—N4—Cu1 | 119.72 (18) | C15—C14—C24 | 121.1 (2) |
N2—C1—C11 | 113.3 (2) | C23—C14—C24 | 119.8 (2) |
N2—C1—H1A | 108.9 | C17—C15—C14 | 120.2 (3) |
C11—C1—H1A | 108.9 | C17—C15—H15 | 119.9 |
N2—C1—H1B | 108.9 | C14—C15—H15 | 119.9 |
C11—C1—H1B | 108.9 | C21—C16—C10 | 119.0 (3) |
H1A—C1—H1B | 107.7 | C21—C16—H16 | 120.5 |
N1—C2—C7 | 114.5 (2) | C10—C16—H16 | 120.5 |
N1—C2—H2A | 108.6 | C12—C17—C15 | 120.6 (3) |
C7—C2—H2A | 108.6 | C12—C17—H17 | 119.7 |
N1—C2—H2B | 108.6 | C15—C17—H17 | 119.7 |
C7—C2—H2B | 108.6 | N4—C18—C11 | 123.7 (2) |
H2A—C2—H2B | 107.6 | N4—C18—H18 | 118.2 |
C7—C3—C5 | 120.2 (3) | C11—C18—H18 | 118.2 |
C7—C3—H3 | 119.9 | O1—C19—O4 | 123.2 (3) |
C5—C3—H3 | 119.9 | O1—C19—C20 | 119.6 (2) |
N2—C4—C8ii | 109.8 (2) | O4—C19—C20 | 117.2 (2) |
N2—C4—H4A | 109.7 | C23—C20—C12 | 119.1 (2) |
C8ii—C4—H4A | 109.7 | C23—C20—C19 | 121.0 (2) |
N2—C4—H4B | 109.7 | C12—C20—C19 | 119.9 (2) |
C8ii—C4—H4B | 109.7 | N4—C21—C16 | 122.5 (3) |
H4A—C4—H4B | 108.2 | N4—C21—H21 | 118.7 |
C13—C5—C3 | 118.4 (3) | C16—C21—H21 | 118.7 |
C13—C5—H5 | 120.8 | N3—C22—C7 | 122.9 (3) |
C3—C5—H5 | 120.8 | N3—C22—H22 | 118.6 |
N1—C6—C9iii | 110.4 (2) | C7—C22—H22 | 118.6 |
N1—C6—H6A | 109.6 | C20—C23—C14 | 121.3 (3) |
C9iii—C6—H6A | 109.6 | C20—C23—H23 | 119.4 |
N1—C6—H6B | 109.6 | C14—C23—H23 | 119.4 |
C9iii—C6—H6B | 109.6 | O3—C24—O2 | 125.9 (2) |
H6A—C6—H6B | 108.1 | O3—C24—C14 | 120.1 (2) |
C3—C7—C22 | 117.6 (3) | O2—C24—C14 | 114.0 (2) |
C3—C7—C2 | 120.2 (3) | ||
O2i—Cu1—O4—C19 | −1.3 (3) | C22—N3—C13—C5 | 0.3 (4) |
N4—Cu1—O4—C19 | 95.58 (16) | Cu1—N3—C13—C5 | −174.6 (2) |
N3—Cu1—O4—C19 | −90.64 (16) | C3—C5—C13—N3 | 0.4 (4) |
O5—Cu1—O4—C19 | −174.53 (15) | C23—C14—C15—C17 | −0.7 (4) |
O2i—Cu1—N3—C13 | 156.3 (2) | C24—C14—C15—C17 | −178.8 (2) |
O4—Cu1—N3—C13 | −50.2 (2) | C11—C10—C16—C21 | −0.2 (4) |
O5—Cu1—N3—C13 | 61.3 (2) | C20—C12—C17—C15 | 1.0 (4) |
O2i—Cu1—N3—C22 | −18.4 (2) | C14—C15—C17—C12 | −0.2 (4) |
O4—Cu1—N3—C22 | 135.1 (2) | C21—N4—C18—C11 | −0.6 (4) |
O5—Cu1—N3—C22 | −113.4 (2) | Cu1—N4—C18—C11 | 178.0 (2) |
O2i—Cu1—N4—C18 | 24.1 (2) | C10—C11—C18—N4 | 0.0 (4) |
O4—Cu1—N4—C18 | −129.5 (2) | C1—C11—C18—N4 | 178.2 (3) |
O5—Cu1—N4—C18 | 119.3 (2) | Cu1—O4—C19—O1 | −7.3 (3) |
O2i—Cu1—N4—C21 | −157.3 (2) | Cu1—O4—C19—C20 | 171.84 (18) |
O4—Cu1—N4—C21 | 49.1 (2) | C17—C12—C20—C23 | −1.0 (4) |
O5—Cu1—N4—C21 | −62.1 (2) | C17—C12—C20—C19 | 177.2 (2) |
C8—N2—C1—C11 | −161.2 (3) | O1—C19—C20—C23 | −171.1 (2) |
C4—N2—C1—C11 | 75.9 (3) | O4—C19—C20—C23 | 9.6 (4) |
C6—N1—C2—C7 | −72.1 (3) | O1—C19—C20—C12 | 10.7 (4) |
C9—N1—C2—C7 | 166.9 (3) | O4—C19—C20—C12 | −168.6 (2) |
C1—N2—C4—C8ii | −176.4 (2) | C18—N4—C21—C16 | 0.8 (4) |
C8—N2—C4—C8ii | 59.3 (3) | Cu1—N4—C21—C16 | −177.8 (2) |
C7—C3—C5—C13 | −0.4 (5) | C10—C16—C21—N4 | −0.5 (4) |
C2—N1—C6—C9iii | 179.3 (2) | C13—N3—C22—C7 | −1.1 (4) |
C9—N1—C6—C9iii | −58.8 (3) | Cu1—N3—C22—C7 | 173.6 (2) |
C5—C3—C7—C22 | −0.3 (4) | C3—C7—C22—N3 | 1.1 (4) |
C5—C3—C7—C2 | 177.2 (3) | C2—C7—C22—N3 | −176.4 (3) |
N1—C2—C7—C3 | 166.5 (3) | C12—C20—C23—C14 | 0.2 (4) |
N1—C2—C7—C22 | −16.1 (4) | C19—C20—C23—C14 | −178.0 (2) |
C1—N2—C8—C4ii | 176.0 (2) | C15—C14—C23—C20 | 0.6 (4) |
C4—N2—C8—C4ii | −59.4 (3) | C24—C14—C23—C20 | 178.8 (2) |
C2—N1—C9—C6iii | −177.9 (3) | Cu1iv—O2—C24—O3 | 4.6 (4) |
C6—N1—C9—C6iii | 58.8 (3) | Cu1iv—O2—C24—C14 | −174.75 (15) |
C16—C10—C11—C18 | 0.4 (4) | C15—C14—C24—O3 | −178.8 (2) |
C16—C10—C11—C1 | −177.8 (3) | C23—C14—C24—O3 | 3.1 (4) |
N2—C1—C11—C10 | −171.6 (3) | C15—C14—C24—O2 | 0.6 (4) |
N2—C1—C11—C18 | 10.3 (4) | C23—C14—C24—O2 | −177.5 (2) |
Symmetry codes: (i) x, y+1, z; (ii) −x−1, −y+1, −z+1; (iii) −x−1, −y+1, −z; (iv) x, y−1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O1v | 0.82 (2) | 1.96 (2) | 2.778 (3) | 174 (3) |
O5—H5B···O3i | 0.83 (2) | 2.02 (2) | 2.805 (3) | 158 (3) |
Symmetry codes: (i) x, y+1, z; (v) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C8H4O4)(C16H20N4)(H2O)] |
Mr | 514.03 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 173 |
a, b, c (Å) | 6.9122 (4), 10.0328 (5), 16.7456 (9) |
α, β, γ (°) | 86.822 (1), 84.210 (1), 80.771 (1) |
V (Å3) | 1139.49 (11) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.00 |
Crystal size (mm) | 0.34 × 0.18 × 0.17 |
Data collection | |
Diffractometer | Bruker APEXII diffractometer |
Absorption correction | Multi-scan (TWINABS; Sheldrick, 2003) |
Tmin, Tmax | 0.729, 0.850 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31818, 4141, 3681 |
Rint | 0.077 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.117, 1.16 |
No. of reflections | 4141 |
No. of parameters | 313 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.44, −0.56 |
Computer programs: APEX2 (Bruker, 2006), SAINT (Bruker, 2006), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Crystal Maker (Palmer, 2007).
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O1i | 0.820 (18) | 1.962 (18) | 2.778 (3) | 174 (3) |
O5—H5B···O3ii | 0.825 (17) | 2.02 (2) | 2.805 (3) | 158 (3) |
Symmetry codes: (i) x+1, y, z; (ii) x, y+1, z. |
Acknowledgements
We gratefully acknowledge the donors of the American Chemical Society Petroleum Research Fund for funding this work. CMG thanks the Michigan State University Honors College for funding his Professorial Assistantship.
References
Bruker (2006). APEX2 and SAINT. Bruker AXS, Inc., Madison, Wisconsin, USA. Google Scholar
Johnston, L. L., Martin, D. P. & LaDuca, R. L. (2008). Inorg. Chim. Acta, 361, 2887–2894. Web of Science CSD CrossRef CAS Google Scholar
Palmer, D. (2007). CrystalMaker. CrystalMaker Software Ltd, Yarnton, England. Google Scholar
Pocic, D., Planeix, J.-M., Kyritsakas, N., Jouaiti, A. & Husseini, M. W. (2005). CrystEngComm, 7, 624–628. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (2003). TWINABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2009). CELLNOW. University of Göttingen, Germany. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound (I) was prepared by the hydrothermal reaction of copper nitrate, isophthalic acid and bis(3-pyridylmethyl)piperazine (3-bpmp). Its asymmetric unit (Fig. 1) contains a divalent copper atom, an aqua ligand, a fully deprotonated isophthalate ligand, and halves of two crystallographically independent 3-bpmp ligands whose central piperazinyl rings contain crystallographic inversion centers. In contrast to the previously reported phase {[Cu(H2O)(isophthalate)(3-bpmp)].2H2O}n (Johnston, et al., 2008) no water molecules of crystallization are present in the title compound.
The basal plane of the distorted square pyramidal {CuO3N2} coordination sphere contains two trans pyridyl N atom donors from crystallographically distinct 3-bpmp ligands and two trans O atom donors from different isophthalate ligands. The apical position is occupied by the aqua ligand.
Isophthalate ligands in a bis(monodentate) bridging mode link the CuII ions into one-dimensional [Cu(H2O)(isophthalate)]n coordination polymer chains arranged along the b crystal direction. The Cu···Cu distance through the isophthalate ligands measures 10.0328 (5) Å, defining the b lattice parameter. In turn, these chains are connected into undulating [Cu(H2O)(isophthalate)(3-bpmp)]n coordination polymer layers by 3-bpmp tethering ligands (Fig. 2). These layers are arranged parallel to the bc crystal planes. The crystallographically distinct 3-bpmp ligands promote two different through-ligand Cu···Cu contact distances, 12.394 (6) and 12.830 (6) Å. The "wavelength" of the undulations in the layer motifs is 16.7456 (9) Å, which defines the c lattice parameter. Intralayer hydrogen bonding between the aqua ligands and unligated isophthalate O atoms provides additional stabilization of the layer motifs.
Adjacent [Cu(H2O)(isophthalate)(3-bpmp)]n layers stack in an AAA pattern along the a crystal direction. Interlayer hydrogen bonding between the aqua ligands and unligated isophthalate O atoms provides the supramolecular interactions necessary to generate the pseudo three-dimensional structure of the title compound.