organic compounds
4-Chloro-2-{3-chloro-2-[(3,5-dimethylpiperidin-1-yl)methyl]phenylsulfanyl}-6-methoxypyrimidine
aSchool of Chemistry and Environmental Science, Guizhou University for Nationalities, Guiyang 550025, People's Republic of China, and bCollege of Chemistry and Chemical Engineering, Luoyang Normal University, Luoyang 471022, People's Republic of China
*Correspondence e-mail: zhumei@iccas.ac.cn
In the title compound, C19H23Cl2N3OS, the dihedral angle between the benzene ring and the pyrimidine ring is 86.6 (9)°. The piperidine ring adopts a chair conformation.
Related literature
For the biological activity of pyrimidine derivatives, see: Joffe et al. (1989); Petersen & Schmidt (2003); Blum (2001); Gompper et al. (2004); Michael (2005); Nadal & Olavarria (2004).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536810004599/pb2021sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810004599/pb2021Isup2.hkl
To a solution of 2,4-dichloro-6-methoxypyrimidine (0.5 mmol) and 3-chloro-2-((3,5-dimethylpiperidin-1-yl)methyl)benzenethiol (0.5 mmol) in dry methylbenzene was added NaH (0.6 mmol). The mixture was stirred for 12 h at room temperature. After evaporation of the solvent, the residue was purified by
on silica gel to afford the title compound as a colorless solid (yield 78%). The title compound was recrystallized from CH2Cl2 at room temperature to give the desired crystals suitable for single-crystal X-ray diffraction.All H atoms were positioned geometrically and treated as riding, with C—H bond lengths constrained to 0.93 Å (aromatic CH) or 0.97 Å (methylene CH2), and with Uĩso~(H) = 1.2Ueq(C) or 1.5Ueq(methylene C).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. View of the molecular structure of (I) with atom numbering scheme and 30% probability displacement ellipsoids. |
C19H23Cl2N3OS | Z = 2 |
Mr = 412.36 | F(000) = 432 |
Triclinic, P1 | Dx = 1.313 Mg m−3 |
a = 8.000 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.454 (6) Å | Cell parameters from 2557 reflections |
c = 12.001 (7) Å | θ = 2.5–25.9° |
α = 87.820 (7)° | µ = 0.42 mm−1 |
β = 76.084 (6)° | T = 296 K |
γ = 77.700 (6)° | Block, colourless |
V = 1042.9 (10) Å3 | 0.39 × 0.37 × 0.25 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3848 independent reflections |
Radiation source: fine-focus sealed tube | 2553 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
phi and ω scans | θmax = 25.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.852, Tmax = 0.901 | k = −13→13 |
7861 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0498P)2 + 0.3748P] where P = (Fo2 + 2Fc2)/3 |
3848 reflections | (Δ/σ)max < 0.001 |
238 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.31 e Å−3 |
C19H23Cl2N3OS | γ = 77.700 (6)° |
Mr = 412.36 | V = 1042.9 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.000 (4) Å | Mo Kα radiation |
b = 11.454 (6) Å | µ = 0.42 mm−1 |
c = 12.001 (7) Å | T = 296 K |
α = 87.820 (7)° | 0.39 × 0.37 × 0.25 mm |
β = 76.084 (6)° |
Bruker SMART APEXII CCD area-detector diffractometer | 3848 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2553 reflections with I > 2σ(I) |
Tmin = 0.852, Tmax = 0.901 | Rint = 0.019 |
7861 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.30 e Å−3 |
3848 reflections | Δρmin = −0.31 e Å−3 |
238 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.8993 (3) | 0.4679 (2) | 0.3790 (2) | 0.0511 (6) | |
C2 | 0.7914 (4) | 0.5783 (3) | 0.4072 (2) | 0.0639 (7) | |
H2 | 0.8031 | 0.6417 | 0.3572 | 0.077* | |
C3 | 0.6657 (4) | 0.5951 (3) | 0.5096 (3) | 0.0772 (10) | |
H3 | 0.5913 | 0.6695 | 0.5281 | 0.093* | |
C4 | 0.6503 (4) | 0.5026 (4) | 0.5841 (3) | 0.0765 (10) | |
H4 | 0.5657 | 0.5136 | 0.6533 | 0.092* | |
C5 | 0.7618 (4) | 0.3926 (3) | 0.5555 (2) | 0.0649 (8) | |
C6 | 0.8897 (3) | 0.3706 (2) | 0.4527 (2) | 0.0517 (6) | |
C7 | 1.0146 (4) | 0.2522 (3) | 0.4215 (2) | 0.0613 (7) | |
H7A | 1.1342 | 0.2648 | 0.3977 | 0.074* | |
H7B | 1.0071 | 0.2019 | 0.4886 | 0.074* | |
C8 | 1.1282 (4) | 0.1048 (3) | 0.2685 (3) | 0.0722 (8) | |
H8A | 1.1601 | 0.0419 | 0.3206 | 0.087* | |
H8B | 1.2269 | 0.1439 | 0.2432 | 0.087* | |
C9 | 1.0929 (4) | 0.0498 (3) | 0.1644 (3) | 0.0773 (9) | |
H9 | 1.0612 | 0.1145 | 0.1126 | 0.093* | |
C10 | 0.9343 (4) | −0.0090 (3) | 0.2069 (3) | 0.0838 (10) | |
H10A | 0.9048 | −0.0403 | 0.1418 | 0.101* | |
H10B | 0.9647 | −0.0753 | 0.2562 | 0.101* | |
C11 | 0.7761 (4) | 0.0801 (3) | 0.2730 (3) | 0.0867 (10) | |
H11 | 0.7438 | 0.1436 | 0.2202 | 0.104* | |
C12 | 0.8245 (4) | 0.1367 (3) | 0.3699 (3) | 0.0757 (9) | |
H12A | 0.7247 | 0.1972 | 0.4083 | 0.091* | |
H12B | 0.8503 | 0.0761 | 0.4256 | 0.091* | |
C13 | 1.2537 (5) | −0.0357 (3) | 0.1000 (3) | 0.1102 (13) | |
H13A | 1.3485 | 0.0055 | 0.0749 | 0.165* | |
H13B | 1.2284 | −0.0676 | 0.0345 | 0.165* | |
H13C | 1.2871 | −0.0998 | 0.1494 | 0.165* | |
C14 | 0.6166 (5) | 0.0238 (4) | 0.3187 (5) | 0.151 (2) | |
H14A | 0.6428 | −0.0360 | 0.3738 | 0.226* | |
H14B | 0.5894 | −0.0124 | 0.2562 | 0.226* | |
H14C | 0.5174 | 0.0844 | 0.3547 | 0.226* | |
C15 | 0.9754 (3) | 0.4023 (2) | 0.14901 (19) | 0.0466 (6) | |
C16 | 1.0372 (3) | 0.3253 (2) | −0.0292 (2) | 0.0483 (6) | |
C17 | 0.8596 (3) | 0.3280 (2) | −0.0188 (2) | 0.0528 (6) | |
H17 | 0.8179 | 0.3030 | −0.0778 | 0.063* | |
C18 | 0.7513 (3) | 0.3697 (2) | 0.0833 (2) | 0.0500 (6) | |
C19 | 1.3329 (4) | 0.2760 (3) | −0.1362 (3) | 0.0729 (8) | |
H19A | 1.3525 | 0.3554 | −0.1317 | 0.109* | |
H19B | 1.3998 | 0.2398 | −0.2085 | 0.109* | |
H19C | 1.3695 | 0.2292 | −0.0749 | 0.109* | |
Cl1 | 0.73889 (14) | 0.27940 (11) | 0.65587 (8) | 0.1117 (4) | |
Cl2 | 0.52759 (9) | 0.37327 (8) | 0.10766 (6) | 0.0780 (3) | |
N1 | 0.9758 (3) | 0.19101 (19) | 0.32894 (19) | 0.0585 (6) | |
N2 | 0.8031 (3) | 0.40866 (18) | 0.16994 (16) | 0.0497 (5) | |
N3 | 1.0978 (3) | 0.36245 (17) | 0.05379 (16) | 0.0480 (5) | |
O1 | 1.1505 (2) | 0.28158 (17) | −0.12653 (14) | 0.0651 (5) | |
S1 | 1.06955 (9) | 0.45367 (7) | 0.25092 (6) | 0.0613 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0428 (14) | 0.0719 (18) | 0.0443 (13) | −0.0167 (13) | −0.0152 (11) | −0.0130 (13) |
C2 | 0.0580 (18) | 0.0735 (19) | 0.0658 (18) | −0.0100 (15) | −0.0263 (15) | −0.0174 (15) |
C3 | 0.0500 (18) | 0.095 (2) | 0.088 (2) | −0.0002 (16) | −0.0258 (17) | −0.043 (2) |
C4 | 0.0440 (17) | 0.127 (3) | 0.0581 (18) | −0.0211 (19) | −0.0025 (13) | −0.0381 (19) |
C5 | 0.0497 (16) | 0.102 (2) | 0.0489 (15) | −0.0256 (16) | −0.0123 (12) | −0.0129 (15) |
C6 | 0.0387 (14) | 0.0765 (18) | 0.0458 (14) | −0.0172 (13) | −0.0144 (11) | −0.0118 (13) |
C7 | 0.0502 (16) | 0.0762 (19) | 0.0630 (17) | −0.0127 (14) | −0.0235 (13) | −0.0044 (14) |
C8 | 0.0544 (18) | 0.075 (2) | 0.086 (2) | −0.0077 (15) | −0.0158 (15) | −0.0109 (16) |
C9 | 0.088 (2) | 0.0613 (19) | 0.084 (2) | −0.0076 (17) | −0.0285 (18) | −0.0092 (16) |
C10 | 0.090 (2) | 0.063 (2) | 0.104 (3) | −0.0093 (18) | −0.038 (2) | −0.0161 (18) |
C11 | 0.069 (2) | 0.078 (2) | 0.126 (3) | −0.0152 (17) | −0.044 (2) | −0.019 (2) |
C12 | 0.0523 (18) | 0.080 (2) | 0.096 (2) | −0.0149 (15) | −0.0165 (16) | −0.0183 (17) |
C13 | 0.120 (3) | 0.099 (3) | 0.097 (3) | −0.015 (2) | −0.003 (2) | −0.023 (2) |
C14 | 0.081 (3) | 0.149 (4) | 0.234 (6) | −0.048 (3) | −0.028 (3) | −0.070 (4) |
C15 | 0.0469 (15) | 0.0525 (15) | 0.0424 (13) | −0.0118 (12) | −0.0128 (11) | −0.0016 (11) |
C16 | 0.0533 (16) | 0.0477 (14) | 0.0413 (13) | −0.0097 (11) | −0.0065 (11) | −0.0045 (11) |
C17 | 0.0575 (16) | 0.0600 (16) | 0.0461 (14) | −0.0163 (13) | −0.0179 (12) | −0.0061 (12) |
C18 | 0.0462 (15) | 0.0567 (15) | 0.0498 (14) | −0.0110 (12) | −0.0159 (12) | −0.0012 (12) |
C19 | 0.0481 (17) | 0.087 (2) | 0.0704 (19) | −0.0035 (15) | 0.0056 (14) | −0.0227 (16) |
Cl1 | 0.1161 (8) | 0.1555 (10) | 0.0669 (5) | −0.0582 (7) | −0.0048 (5) | 0.0201 (6) |
Cl2 | 0.0450 (4) | 0.1197 (7) | 0.0740 (5) | −0.0198 (4) | −0.0189 (3) | −0.0135 (4) |
N1 | 0.0447 (13) | 0.0622 (14) | 0.0712 (14) | −0.0079 (11) | −0.0197 (11) | −0.0128 (11) |
N2 | 0.0428 (12) | 0.0640 (13) | 0.0436 (11) | −0.0108 (10) | −0.0120 (9) | −0.0063 (9) |
N3 | 0.0459 (12) | 0.0536 (12) | 0.0436 (11) | −0.0111 (9) | −0.0076 (9) | −0.0041 (9) |
O1 | 0.0607 (12) | 0.0770 (13) | 0.0517 (11) | −0.0109 (10) | −0.0021 (9) | −0.0198 (9) |
S1 | 0.0499 (4) | 0.0947 (6) | 0.0468 (4) | −0.0301 (4) | −0.0108 (3) | −0.0118 (3) |
C1—C2 | 1.374 (4) | C11—C14 | 1.527 (5) |
C1—C6 | 1.400 (4) | C11—H11 | 0.9800 |
C1—S1 | 1.778 (3) | C12—N1 | 1.451 (3) |
C2—C3 | 1.378 (4) | C12—H12A | 0.9700 |
C2—H2 | 0.9300 | C12—H12B | 0.9700 |
C3—C4 | 1.367 (5) | C13—H13A | 0.9600 |
C3—H3 | 0.9300 | C13—H13B | 0.9600 |
C4—C5 | 1.381 (4) | C13—H13C | 0.9600 |
C4—H4 | 0.9300 | C14—H14A | 0.9600 |
C5—C6 | 1.392 (4) | C14—H14B | 0.9600 |
C5—Cl1 | 1.744 (3) | C14—H14C | 0.9600 |
C6—C7 | 1.504 (4) | C15—N2 | 1.327 (3) |
C7—N1 | 1.462 (3) | C15—N3 | 1.336 (3) |
C7—H7A | 0.9700 | C15—S1 | 1.759 (2) |
C7—H7B | 0.9700 | C16—N3 | 1.327 (3) |
C8—N1 | 1.450 (3) | C16—O1 | 1.334 (3) |
C8—C9 | 1.531 (4) | C16—C17 | 1.390 (3) |
C8—H8A | 0.9700 | C17—C18 | 1.356 (3) |
C8—H8B | 0.9700 | C17—H17 | 0.9300 |
C9—C13 | 1.501 (5) | C18—N2 | 1.331 (3) |
C9—C10 | 1.533 (4) | C18—Cl2 | 1.735 (3) |
C9—H9 | 0.9800 | C19—O1 | 1.423 (3) |
C10—C11 | 1.517 (4) | C19—H19A | 0.9600 |
C10—H10A | 0.9700 | C19—H19B | 0.9600 |
C10—H10B | 0.9700 | C19—H19C | 0.9600 |
C11—C12 | 1.518 (4) | ||
C2—C1—C6 | 122.1 (2) | C10—C11—H11 | 107.8 |
C2—C1—S1 | 118.1 (2) | C14—C11—H11 | 107.8 |
C6—C1—S1 | 119.5 (2) | N1—C12—C11 | 112.1 (3) |
C1—C2—C3 | 120.0 (3) | N1—C12—H12A | 109.2 |
C1—C2—H2 | 120.0 | C11—C12—H12A | 109.2 |
C3—C2—H2 | 120.0 | N1—C12—H12B | 109.2 |
C4—C3—C2 | 120.1 (3) | C11—C12—H12B | 109.2 |
C4—C3—H3 | 119.9 | H12A—C12—H12B | 107.9 |
C2—C3—H3 | 119.9 | C9—C13—H13A | 109.5 |
C3—C4—C5 | 119.2 (3) | C9—C13—H13B | 109.5 |
C3—C4—H4 | 120.4 | H13A—C13—H13B | 109.5 |
C5—C4—H4 | 120.4 | C9—C13—H13C | 109.5 |
C4—C5—C6 | 122.9 (3) | H13A—C13—H13C | 109.5 |
C4—C5—Cl1 | 116.9 (2) | H13B—C13—H13C | 109.5 |
C6—C5—Cl1 | 120.1 (2) | C11—C14—H14A | 109.5 |
C5—C6—C1 | 115.7 (3) | C11—C14—H14B | 109.5 |
C5—C6—C7 | 123.5 (3) | H14A—C14—H14B | 109.5 |
C1—C6—C7 | 120.8 (2) | C11—C14—H14C | 109.5 |
N1—C7—C6 | 112.1 (2) | H14A—C14—H14C | 109.5 |
N1—C7—H7A | 109.2 | H14B—C14—H14C | 109.5 |
C6—C7—H7A | 109.2 | N2—C15—N3 | 127.9 (2) |
N1—C7—H7B | 109.2 | N2—C15—S1 | 120.94 (18) |
C6—C7—H7B | 109.2 | N3—C15—S1 | 111.10 (18) |
H7A—C7—H7B | 107.9 | N3—C16—O1 | 119.2 (2) |
N1—C8—C9 | 111.9 (2) | N3—C16—C17 | 122.8 (2) |
N1—C8—H8A | 109.2 | O1—C16—C17 | 118.0 (2) |
C9—C8—H8A | 109.2 | C18—C17—C16 | 115.4 (2) |
N1—C8—H8B | 109.2 | C18—C17—H17 | 122.3 |
C9—C8—H8B | 109.2 | C16—C17—H17 | 122.3 |
H8A—C8—H8B | 107.9 | N2—C18—C17 | 124.9 (2) |
C13—C9—C8 | 111.4 (3) | N2—C18—Cl2 | 115.60 (19) |
C13—C9—C10 | 112.8 (3) | C17—C18—Cl2 | 119.48 (19) |
C8—C9—C10 | 107.9 (3) | O1—C19—H19A | 109.5 |
C13—C9—H9 | 108.2 | O1—C19—H19B | 109.5 |
C8—C9—H9 | 108.2 | H19A—C19—H19B | 109.5 |
C10—C9—H9 | 108.2 | O1—C19—H19C | 109.5 |
C11—C10—C9 | 111.0 (3) | H19A—C19—H19C | 109.5 |
C11—C10—H10A | 109.4 | H19B—C19—H19C | 109.5 |
C9—C10—H10A | 109.4 | C8—N1—C12 | 111.5 (2) |
C11—C10—H10B | 109.4 | C8—N1—C7 | 111.9 (2) |
C9—C10—H10B | 109.4 | C12—N1—C7 | 111.8 (2) |
H10A—C10—H10B | 108.0 | C15—N2—C18 | 113.9 (2) |
C12—C11—C10 | 110.0 (3) | C16—N3—C15 | 115.1 (2) |
C12—C11—C14 | 110.9 (3) | C16—O1—C19 | 118.0 (2) |
C10—C11—C14 | 112.3 (3) | C15—S1—C1 | 103.40 (12) |
C12—C11—H11 | 107.8 | ||
C6—C1—C2—C3 | −1.7 (4) | N3—C16—C17—C18 | −1.0 (4) |
S1—C1—C2—C3 | −175.51 (19) | O1—C16—C17—C18 | 178.0 (2) |
C1—C2—C3—C4 | 1.2 (4) | C16—C17—C18—N2 | 1.2 (4) |
C2—C3—C4—C5 | 0.0 (4) | C16—C17—C18—Cl2 | −178.17 (19) |
C3—C4—C5—C6 | −0.7 (4) | C9—C8—N1—C12 | 59.6 (3) |
C3—C4—C5—Cl1 | 178.5 (2) | C9—C8—N1—C7 | −174.4 (2) |
C4—C5—C6—C1 | 0.1 (4) | C11—C12—N1—C8 | −57.7 (3) |
Cl1—C5—C6—C1 | −178.95 (17) | C11—C12—N1—C7 | 176.2 (2) |
C4—C5—C6—C7 | 178.6 (2) | C6—C7—N1—C8 | 157.2 (2) |
Cl1—C5—C6—C7 | −0.5 (3) | C6—C7—N1—C12 | −76.9 (3) |
C2—C1—C6—C5 | 1.0 (3) | N3—C15—N2—C18 | −0.1 (4) |
S1—C1—C6—C5 | 174.74 (17) | S1—C15—N2—C18 | 178.03 (18) |
C2—C1—C6—C7 | −177.5 (2) | C17—C18—N2—C15 | −0.7 (4) |
S1—C1—C6—C7 | −3.8 (3) | Cl2—C18—N2—C15 | 178.70 (18) |
C5—C6—C7—N1 | 109.8 (3) | O1—C16—N3—C15 | −178.6 (2) |
C1—C6—C7—N1 | −71.8 (3) | C17—C16—N3—C15 | 0.4 (3) |
N1—C8—C9—C13 | 177.8 (3) | N2—C15—N3—C16 | 0.2 (4) |
N1—C8—C9—C10 | −57.8 (3) | S1—C15—N3—C16 | −178.04 (17) |
C13—C9—C10—C11 | 179.1 (3) | N3—C16—O1—C19 | 0.5 (3) |
C8—C9—C10—C11 | 55.6 (4) | C17—C16—O1—C19 | −178.5 (2) |
C9—C10—C11—C12 | −54.9 (4) | N2—C15—S1—C1 | 15.0 (2) |
C9—C10—C11—C14 | −178.9 (3) | N3—C15—S1—C1 | −166.64 (18) |
C10—C11—C12—N1 | 55.2 (4) | C2—C1—S1—C15 | −95.9 (2) |
C14—C11—C12—N1 | 180.0 (3) | C6—C1—S1—C15 | 90.2 (2) |
Experimental details
Crystal data | |
Chemical formula | C19H23Cl2N3OS |
Mr | 412.36 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 8.000 (4), 11.454 (6), 12.001 (7) |
α, β, γ (°) | 87.820 (7), 76.084 (6), 77.700 (6) |
V (Å3) | 1042.9 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.42 |
Crystal size (mm) | 0.39 × 0.37 × 0.25 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.852, 0.901 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7861, 3848, 2553 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.119, 1.03 |
No. of reflections | 3848 |
No. of parameters | 238 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.31 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Acknowledgements
This work was supported by the Doctoral Foundation of Luoyang Normal University.
References
Blum, J. L. (2001). Oncologist, 6, 56–64. Web of Science CrossRef PubMed CAS Google Scholar
Bruker (2004). APEX2, and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Gompper, R., Mair, H.-J. & Polborn, K. (2004). Synthesis, pp. 696–708. Google Scholar
Joffe, A. M., Farley, J. D., Linden, D. & Goldsand, G. (1989). Am. J. Med., 87, 332–338. CrossRef CAS PubMed Google Scholar
Michael, J. P. (2005). Nat. Prod. Rep., 22, 627–646. Web of Science CrossRef PubMed CAS Google Scholar
Nadal, E. & Olavarria, E. (2004). Int. J. Clin. Pract., 58, 511–516. Web of Science CrossRef PubMed CAS Google Scholar
Petersen, E. & Schmidt, D. R. (2003). Expert Rev. Anti-Infect. Ther. 1, 175–182. CrossRef CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyrimidine derivatives are widespread in medicinal and natural products chemistry. A number of natural products, pharmaceuticals, and functional materials incorporate this heterocycle (Michael, 2005. Several examples of pharmaceutically important compounds include trimethoprim (Joffe et al., 1989), sulfadiazine (Petersen & Schmidt, 2003),Gleevec (imatinib mesilate) (Nadal & Olavarria, 2004), and Xeloda (capecitabine) (Blum, 2001). Natural and unnatural polymers also contain pyrimidine derivatives (Gompper et al., 2004). The potent physiological properties of these pyrimidine derivatives led to vast research of their use as medicines in the field of pharmaceutical chemistry. So in the recent decades, many chemists have been attracted by the synthesis of pyrimidines. In this context, we report the synthesis ofthe title compound.
The molecular structure is shown in Fig. 1. The bond lengths and angles are within normal ranges. The pyrimidine ring makes dihedral angles of 86.6 (9)° with the benzene ring. In the crystal structure,The cyclohexyl groups display chair-type conformation.