organic compounds
4,4,6-Trimethyl-1-(3-methylphenyl)-3,4-dihydropyrimidine-2(1H)-thione
aDepartment of Chemistry, Quaid-i-Azam University, Islamabad 45320, Pakistan, and bDepartment of Chemistry, The University of Calgary, 2500 University Drive NW, Calgary, Alberta, Canada T2N 1N4
*Correspondence e-mail: aamersaeed@yahoo.com
The 14H18N2S, contains two independent and conformationally similar molecules, which form cyclic dimers via intermolecular hydrogen bonds of the type N—H⋯S [graph set R22(8)]. The structure is isomorphous with that of one of the polymorphs of 4,4,6-trimethyl-1-phenyl-3,4-dihydropyrimidine-2(1H)-thione [Yamin et al. (2005). Acta Cryst. E61, o55–o57].
of the title compound, CRelated literature
For the biological activity of pyrimidine-2-thiones, see: Alam et al. (2005); Sriram et al. (2006); Swamy et al. (2005). For related structures, see: Yamin et al. (2005); Ismail et al. (2007). For graph-set analysis, see Etter et al. (1990).
Experimental
Crystal data
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Refinement
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Data collection: COLLECT (Hooft, 1998); cell HKL DENZO (Otwinowski & Minor, 1997); data reduction: SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
10.1107/S1600536810004708/zs2028sup1.cif
contains datablocks Global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810004708/zs2028Isup2.hkl
The title compound was prepared by the reaction of 3-methylaniline with 4-methylpent-3-en-2-one in the presence of potassium thiocyanate in acetone: details of the synthesis will be reported later. Recrystallization from methanol afforded the title compound as colourless crystals: Anal. calcd. for C14H18N2S: C, 68.25; H, 7.36; N, 11.37; S, 13.01%; found: C, 68.09; H, 7.41; N, 11.51; S, 13.12.
All H-atoms were visible in the difference Fourier maps but were included in the refinements at geometrically idealized positions with distances: N—H = 0.88 Å and C—H = 0.95 and 0.98 Å, with Uiso = 1.2Ueq of the atoms to which they were bonded. The final difference map was free of chemically significant features.
Data collection: COLLECT (Hooft, 1998); cell
HKL DENZO (Otwinowski & Minor, 1997); data reduction: SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C14H18N2S | F(000) = 2112 |
Mr = 246.36 | Dx = 1.195 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 8634 reflections |
a = 10.5904 (3) Å | θ = 1.0–25.3° |
b = 16.9189 (5) Å | µ = 0.22 mm−1 |
c = 30.5713 (10) Å | T = 173 K |
V = 5477.7 (3) Å3 | Block, colorless |
Z = 16 | 0.14 × 0.12 × 0.08 mm |
Bruker APEXII CCD diffractometer | 4830 independent reflections |
Radiation source: fine-focus sealed tube | 3231 reflections with I > 2.0σ(I) |
Graphite monochromator | Rint = 0.041 |
ϕ & ω scans | θmax = 25.3°, θmin = 2.3° |
Absorption correction: multi-scan (SORTAV; Blessing, 1997) | h = −12→12 |
Tmin = 0.970, Tmax = 0.983 | k = −20→20 |
19135 measured reflections | l = −36→36 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.115 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.038P)2 + 3.05P] where P = (Fo2 + 2Fc2)/3 |
4830 reflections | (Δ/σ)max < 0.001 |
315 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C14H18N2S | V = 5477.7 (3) Å3 |
Mr = 246.36 | Z = 16 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 10.5904 (3) Å | µ = 0.22 mm−1 |
b = 16.9189 (5) Å | T = 173 K |
c = 30.5713 (10) Å | 0.14 × 0.12 × 0.08 mm |
Bruker APEXII CCD diffractometer | 4830 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1997) | 3231 reflections with I > 2.0σ(I) |
Tmin = 0.970, Tmax = 0.983 | Rint = 0.041 |
19135 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.115 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.25 e Å−3 |
4830 reflections | Δρmin = −0.23 e Å−3 |
315 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.85314 (7) | 0.07897 (4) | 0.325070 (19) | 0.03644 (19) | |
S2 | 0.84290 (7) | 0.24913 (4) | 0.43316 (2) | 0.03863 (19) | |
N1 | 0.75860 (19) | 0.22309 (11) | 0.32616 (6) | 0.0343 (5) | |
H1N | 0.7579 | 0.2164 | 0.3547 | 0.041* | |
N2 | 0.76802 (18) | 0.16559 (11) | 0.25790 (6) | 0.0305 (5) | |
N3 | 0.7806 (2) | 0.09853 (11) | 0.43444 (6) | 0.0376 (5) | |
H3N | 0.7897 | 0.1032 | 0.4060 | 0.045* | |
N4 | 0.7743 (2) | 0.16054 (12) | 0.50157 (6) | 0.0354 (5) | |
C1 | 0.7907 (2) | 0.16081 (13) | 0.30203 (7) | 0.0285 (6) | |
C2 | 0.7240 (2) | 0.30212 (14) | 0.30983 (8) | 0.0327 (6) | |
C3 | 0.6741 (2) | 0.29264 (14) | 0.26468 (8) | 0.0365 (6) | |
H3 | 0.6220 | 0.3332 | 0.2530 | 0.044* | |
C4 | 0.6990 (2) | 0.23009 (14) | 0.23982 (8) | 0.0325 (6) | |
C5 | 0.6260 (3) | 0.33607 (17) | 0.34098 (9) | 0.0513 (8) | |
H5A | 0.6052 | 0.3902 | 0.3321 | 0.062* | |
H5B | 0.6601 | 0.3365 | 0.3708 | 0.062* | |
H5C | 0.5496 | 0.3034 | 0.3401 | 0.062* | |
C6 | 0.8409 (3) | 0.35435 (16) | 0.31010 (10) | 0.0476 (7) | |
H6A | 0.8182 | 0.4077 | 0.3003 | 0.057* | |
H6B | 0.9045 | 0.3321 | 0.2903 | 0.057* | |
H6C | 0.8753 | 0.3569 | 0.3398 | 0.057* | |
C7 | 0.6571 (3) | 0.22143 (16) | 0.19344 (8) | 0.0440 (7) | |
H7A | 0.6124 | 0.2694 | 0.1843 | 0.053* | |
H7B | 0.6003 | 0.1759 | 0.1909 | 0.053* | |
H7C | 0.7309 | 0.2133 | 0.1746 | 0.053* | |
C8 | 0.8098 (2) | 0.10194 (14) | 0.23002 (7) | 0.0293 (6) | |
C9 | 0.7269 (2) | 0.04236 (14) | 0.21939 (7) | 0.0316 (6) | |
H9 | 0.6433 | 0.0432 | 0.2306 | 0.038* | |
C10 | 0.7653 (2) | −0.01925 (14) | 0.19210 (8) | 0.0346 (6) | |
C11 | 0.8885 (3) | −0.01932 (15) | 0.17714 (8) | 0.0380 (6) | |
H11 | 0.9167 | −0.0617 | 0.1592 | 0.046* | |
C12 | 0.9715 (2) | 0.04068 (16) | 0.18757 (8) | 0.0386 (6) | |
H12 | 1.0554 | 0.0397 | 0.1766 | 0.046* | |
C13 | 0.9320 (2) | 0.10269 (15) | 0.21418 (7) | 0.0339 (6) | |
H13 | 0.9879 | 0.1447 | 0.2213 | 0.041* | |
C14 | 0.6721 (3) | −0.08216 (16) | 0.17965 (9) | 0.0494 (8) | |
H14A | 0.7167 | −0.1264 | 0.1658 | 0.059* | |
H14B | 0.6104 | −0.0602 | 0.1591 | 0.059* | |
H14C | 0.6283 | −0.1009 | 0.2059 | 0.059* | |
C15 | 0.7974 (2) | 0.16412 (14) | 0.45766 (8) | 0.0325 (6) | |
C16 | 0.7484 (3) | 0.01867 (14) | 0.45061 (8) | 0.0390 (7) | |
C17 | 0.7067 (3) | 0.02656 (17) | 0.49684 (9) | 0.0549 (8) | |
H17 | 0.6667 | −0.0176 | 0.5101 | 0.066* | |
C18 | 0.7217 (3) | 0.09111 (15) | 0.52074 (8) | 0.0420 (7) | |
C19 | 0.8654 (3) | −0.03424 (16) | 0.44798 (10) | 0.0569 (8) | |
H19A | 0.8435 | −0.0878 | 0.4576 | 0.068* | |
H19B | 0.9317 | −0.0129 | 0.4670 | 0.068* | |
H19C | 0.8959 | −0.0359 | 0.4177 | 0.068* | |
C20 | 0.6454 (3) | −0.01520 (17) | 0.42148 (10) | 0.0532 (8) | |
H20A | 0.6238 | −0.0686 | 0.4314 | 0.064* | |
H20B | 0.6756 | −0.0174 | 0.3912 | 0.064* | |
H20C | 0.5704 | 0.0186 | 0.4230 | 0.064* | |
C21 | 0.6857 (4) | 0.09640 (19) | 0.56755 (10) | 0.0709 (10) | |
H21A | 0.6561 | 0.0447 | 0.5777 | 0.085* | |
H21B | 0.6180 | 0.1354 | 0.5710 | 0.085* | |
H21C | 0.7591 | 0.1127 | 0.5849 | 0.085* | |
C22 | 0.8055 (2) | 0.22713 (14) | 0.52939 (8) | 0.0331 (6) | |
C23 | 0.7123 (2) | 0.27825 (15) | 0.54251 (8) | 0.0355 (6) | |
H23 | 0.6288 | 0.2718 | 0.5317 | 0.043* | |
C24 | 0.7391 (3) | 0.33970 (15) | 0.57156 (8) | 0.0381 (6) | |
C25 | 0.8616 (3) | 0.34748 (16) | 0.58649 (8) | 0.0425 (7) | |
H25 | 0.8815 | 0.3887 | 0.6064 | 0.051* | |
C26 | 0.9557 (3) | 0.29648 (17) | 0.57300 (8) | 0.0464 (7) | |
H26 | 1.0396 | 0.3033 | 0.5833 | 0.056* | |
C27 | 0.9278 (3) | 0.23536 (16) | 0.54441 (8) | 0.0403 (7) | |
H27 | 0.9918 | 0.1997 | 0.5353 | 0.048* | |
C28 | 0.6363 (3) | 0.39498 (17) | 0.58604 (10) | 0.0541 (8) | |
H28A | 0.6659 | 0.4260 | 0.6111 | 0.065* | |
H28B | 0.5617 | 0.3644 | 0.5945 | 0.065* | |
H28C | 0.6144 | 0.4306 | 0.5619 | 0.065* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0510 (4) | 0.0257 (3) | 0.0326 (3) | 0.0049 (3) | −0.0024 (3) | 0.0000 (3) |
S2 | 0.0582 (5) | 0.0254 (3) | 0.0322 (3) | −0.0035 (3) | −0.0002 (3) | 0.0002 (3) |
N1 | 0.0497 (13) | 0.0252 (11) | 0.0281 (10) | 0.0039 (10) | 0.0008 (10) | −0.0014 (9) |
N2 | 0.0352 (12) | 0.0272 (11) | 0.0292 (10) | 0.0041 (10) | −0.0024 (10) | −0.0019 (9) |
N3 | 0.0615 (15) | 0.0240 (11) | 0.0274 (11) | −0.0043 (11) | 0.0009 (11) | −0.0011 (9) |
N4 | 0.0493 (14) | 0.0276 (11) | 0.0291 (11) | −0.0034 (11) | 0.0026 (10) | −0.0016 (9) |
C1 | 0.0295 (13) | 0.0243 (13) | 0.0318 (13) | −0.0033 (11) | 0.0000 (11) | −0.0012 (10) |
C2 | 0.0375 (15) | 0.0245 (13) | 0.0362 (13) | 0.0026 (12) | −0.0003 (12) | −0.0029 (11) |
C3 | 0.0383 (15) | 0.0272 (14) | 0.0439 (15) | 0.0046 (12) | −0.0074 (13) | 0.0029 (12) |
C4 | 0.0326 (14) | 0.0304 (14) | 0.0345 (14) | 0.0000 (12) | −0.0033 (12) | 0.0016 (11) |
C5 | 0.0586 (19) | 0.0457 (18) | 0.0495 (16) | 0.0192 (16) | 0.0048 (15) | −0.0015 (14) |
C6 | 0.0503 (18) | 0.0360 (16) | 0.0564 (17) | −0.0044 (14) | −0.0067 (15) | 0.0013 (13) |
C7 | 0.0522 (18) | 0.0370 (16) | 0.0427 (15) | 0.0072 (14) | −0.0087 (14) | 0.0001 (12) |
C8 | 0.0337 (15) | 0.0272 (13) | 0.0270 (12) | 0.0039 (12) | −0.0030 (11) | 0.0003 (10) |
C9 | 0.0310 (14) | 0.0335 (14) | 0.0304 (13) | 0.0018 (12) | 0.0000 (11) | 0.0007 (11) |
C10 | 0.0437 (16) | 0.0299 (14) | 0.0300 (13) | 0.0001 (13) | −0.0069 (12) | 0.0011 (11) |
C11 | 0.0471 (17) | 0.0375 (16) | 0.0293 (13) | 0.0127 (14) | −0.0058 (13) | −0.0053 (12) |
C12 | 0.0360 (15) | 0.0475 (17) | 0.0324 (14) | 0.0066 (14) | 0.0006 (12) | −0.0001 (13) |
C13 | 0.0338 (15) | 0.0375 (15) | 0.0305 (13) | −0.0008 (12) | −0.0011 (12) | −0.0006 (11) |
C14 | 0.061 (2) | 0.0392 (16) | 0.0475 (16) | −0.0060 (15) | −0.0062 (15) | −0.0059 (13) |
C15 | 0.0375 (15) | 0.0285 (14) | 0.0316 (13) | 0.0011 (12) | −0.0027 (11) | −0.0003 (11) |
C16 | 0.0558 (18) | 0.0235 (14) | 0.0378 (15) | −0.0044 (13) | 0.0016 (14) | 0.0008 (11) |
C17 | 0.083 (2) | 0.0356 (17) | 0.0457 (17) | −0.0191 (17) | 0.0134 (16) | 0.0015 (13) |
C18 | 0.0555 (18) | 0.0337 (15) | 0.0369 (14) | −0.0072 (14) | 0.0043 (14) | 0.0028 (12) |
C19 | 0.067 (2) | 0.0353 (17) | 0.068 (2) | 0.0020 (16) | −0.0107 (17) | 0.0072 (15) |
C20 | 0.060 (2) | 0.0351 (16) | 0.0645 (19) | −0.0108 (15) | −0.0136 (16) | 0.0014 (14) |
C21 | 0.114 (3) | 0.054 (2) | 0.0451 (17) | −0.026 (2) | 0.0167 (19) | 0.0044 (15) |
C22 | 0.0427 (16) | 0.0287 (14) | 0.0278 (12) | −0.0003 (13) | 0.0009 (12) | −0.0017 (10) |
C23 | 0.0359 (15) | 0.0386 (15) | 0.0319 (13) | −0.0014 (13) | −0.0031 (12) | −0.0013 (12) |
C24 | 0.0479 (17) | 0.0339 (15) | 0.0325 (13) | 0.0029 (14) | 0.0026 (13) | −0.0058 (12) |
C25 | 0.0503 (18) | 0.0429 (17) | 0.0343 (14) | −0.0076 (15) | −0.0065 (14) | −0.0086 (12) |
C26 | 0.0418 (17) | 0.0542 (19) | 0.0431 (16) | −0.0059 (16) | −0.0066 (14) | 0.0004 (14) |
C27 | 0.0400 (16) | 0.0384 (16) | 0.0425 (15) | 0.0029 (13) | 0.0002 (13) | −0.0008 (12) |
C28 | 0.0571 (19) | 0.0471 (18) | 0.0580 (18) | 0.0050 (16) | 0.0054 (16) | −0.0155 (15) |
S1—C1 | 1.688 (2) | C11—H11 | 0.9500 |
S2—C15 | 1.692 (2) | C12—C13 | 1.392 (3) |
N1—C1 | 1.331 (3) | C12—H12 | 0.9500 |
N1—C2 | 1.473 (3) | C13—H13 | 0.9500 |
N1—H1N | 0.8800 | C14—H14A | 0.9800 |
N2—C1 | 1.373 (3) | C14—H14B | 0.9800 |
N2—C4 | 1.425 (3) | C14—H14C | 0.9800 |
N2—C8 | 1.443 (3) | C16—C17 | 1.487 (4) |
N3—C15 | 1.329 (3) | C16—C20 | 1.520 (4) |
N3—C16 | 1.478 (3) | C16—C19 | 1.531 (4) |
N3—H3N | 0.8800 | C17—C18 | 1.324 (4) |
N4—C15 | 1.366 (3) | C17—H17 | 0.9500 |
N4—C18 | 1.426 (3) | C18—C21 | 1.484 (4) |
N4—C22 | 1.450 (3) | C19—H19A | 0.9800 |
C2—C3 | 1.487 (3) | C19—H19B | 0.9800 |
C2—C5 | 1.521 (3) | C19—H19C | 0.9800 |
C2—C6 | 1.521 (3) | C20—H20A | 0.9800 |
C3—C4 | 1.329 (3) | C20—H20B | 0.9800 |
C3—H3 | 0.9500 | C20—H20C | 0.9800 |
C4—C7 | 1.493 (3) | C21—H21A | 0.9800 |
C5—H5A | 0.9800 | C21—H21B | 0.9800 |
C5—H5B | 0.9800 | C21—H21C | 0.9800 |
C5—H5C | 0.9800 | C22—C23 | 1.372 (3) |
C6—H6A | 0.9800 | C22—C27 | 1.381 (3) |
C6—H6B | 0.9800 | C23—C24 | 1.396 (3) |
C6—H6C | 0.9800 | C23—H23 | 0.9500 |
C7—H7A | 0.9800 | C24—C25 | 1.382 (4) |
C7—H7B | 0.9800 | C24—C28 | 1.501 (4) |
C7—H7C | 0.9800 | C25—C26 | 1.381 (4) |
C8—C9 | 1.376 (3) | C25—H25 | 0.9500 |
C8—C13 | 1.381 (3) | C26—C27 | 1.386 (4) |
C9—C10 | 1.396 (3) | C26—H26 | 0.9500 |
C9—H9 | 0.9500 | C27—H27 | 0.9500 |
C10—C11 | 1.382 (4) | C28—H28A | 0.9800 |
C10—C14 | 1.501 (3) | C28—H28B | 0.9800 |
C11—C12 | 1.380 (3) | C28—H28C | 0.9800 |
C1—N1—C2 | 126.47 (19) | C10—C14—H14A | 109.5 |
C1—N1—H1N | 116.8 | C10—C14—H14B | 109.5 |
C2—N1—H1N | 116.8 | H14A—C14—H14B | 109.5 |
C1—N2—C4 | 121.07 (19) | C10—C14—H14C | 109.5 |
C1—N2—C8 | 118.86 (19) | H14A—C14—H14C | 109.5 |
C4—N2—C8 | 119.99 (18) | H14B—C14—H14C | 109.5 |
C15—N3—C16 | 128.0 (2) | N3—C15—N4 | 117.6 (2) |
C15—N3—H3N | 116.0 | N3—C15—S2 | 120.77 (18) |
C16—N3—H3N | 116.0 | N4—C15—S2 | 121.60 (18) |
C15—N4—C18 | 120.7 (2) | N3—C16—C17 | 107.7 (2) |
C15—N4—C22 | 120.1 (2) | N3—C16—C20 | 108.3 (2) |
C18—N4—C22 | 119.22 (19) | C17—C16—C20 | 112.2 (2) |
N1—C1—N2 | 117.0 (2) | N3—C16—C19 | 109.3 (2) |
N1—C1—S1 | 121.21 (17) | C17—C16—C19 | 110.0 (2) |
N2—C1—S1 | 121.80 (17) | C20—C16—C19 | 109.3 (2) |
N1—C2—C3 | 107.76 (19) | C18—C17—C16 | 124.3 (2) |
N1—C2—C5 | 107.5 (2) | C18—C17—H17 | 117.9 |
C3—C2—C5 | 112.3 (2) | C16—C17—H17 | 117.9 |
N1—C2—C6 | 108.8 (2) | C17—C18—N4 | 120.0 (2) |
C3—C2—C6 | 110.9 (2) | C17—C18—C21 | 123.5 (3) |
C5—C2—C6 | 109.4 (2) | N4—C18—C21 | 116.6 (2) |
C4—C3—C2 | 123.1 (2) | C16—C19—H19A | 109.5 |
C4—C3—H3 | 118.4 | C16—C19—H19B | 109.5 |
C2—C3—H3 | 118.4 | H19A—C19—H19B | 109.5 |
C3—C4—N2 | 119.3 (2) | C16—C19—H19C | 109.5 |
C3—C4—C7 | 124.2 (2) | H19A—C19—H19C | 109.5 |
N2—C4—C7 | 116.5 (2) | H19B—C19—H19C | 109.5 |
C2—C5—H5A | 109.5 | C16—C20—H20A | 109.5 |
C2—C5—H5B | 109.5 | C16—C20—H20B | 109.5 |
H5A—C5—H5B | 109.5 | H20A—C20—H20B | 109.5 |
C2—C5—H5C | 109.5 | C16—C20—H20C | 109.5 |
H5A—C5—H5C | 109.5 | H20A—C20—H20C | 109.5 |
H5B—C5—H5C | 109.5 | H20B—C20—H20C | 109.5 |
C2—C6—H6A | 109.5 | C18—C21—H21A | 109.5 |
C2—C6—H6B | 109.5 | C18—C21—H21B | 109.5 |
H6A—C6—H6B | 109.5 | H21A—C21—H21B | 109.5 |
C2—C6—H6C | 109.5 | C18—C21—H21C | 109.5 |
H6A—C6—H6C | 109.5 | H21A—C21—H21C | 109.5 |
H6B—C6—H6C | 109.5 | H21B—C21—H21C | 109.5 |
C4—C7—H7A | 109.5 | C23—C22—C27 | 120.9 (2) |
C4—C7—H7B | 109.5 | C23—C22—N4 | 119.8 (2) |
H7A—C7—H7B | 109.5 | C27—C22—N4 | 119.2 (2) |
C4—C7—H7C | 109.5 | C22—C23—C24 | 120.6 (2) |
H7A—C7—H7C | 109.5 | C22—C23—H23 | 119.7 |
H7B—C7—H7C | 109.5 | C24—C23—H23 | 119.7 |
C9—C8—C13 | 121.5 (2) | C25—C24—C23 | 118.1 (2) |
C9—C8—N2 | 119.4 (2) | C25—C24—C28 | 121.6 (2) |
C13—C8—N2 | 119.2 (2) | C23—C24—C28 | 120.3 (2) |
C8—C9—C10 | 120.1 (2) | C26—C25—C24 | 121.3 (2) |
C8—C9—H9 | 119.9 | C26—C25—H25 | 119.3 |
C10—C9—H9 | 119.9 | C24—C25—H25 | 119.3 |
C11—C10—C9 | 118.3 (2) | C25—C26—C27 | 120.0 (3) |
C11—C10—C14 | 122.4 (2) | C25—C26—H26 | 120.0 |
C9—C10—C14 | 119.3 (2) | C27—C26—H26 | 120.0 |
C12—C11—C10 | 121.6 (2) | C22—C27—C26 | 119.0 (3) |
C12—C11—H11 | 119.2 | C22—C27—H27 | 120.5 |
C10—C11—H11 | 119.2 | C26—C27—H27 | 120.5 |
C11—C12—C13 | 119.9 (2) | C24—C28—H28A | 109.5 |
C11—C12—H12 | 120.1 | C24—C28—H28B | 109.5 |
C13—C12—H12 | 120.1 | H28A—C28—H28B | 109.5 |
C8—C13—C12 | 118.7 (2) | C24—C28—H28C | 109.5 |
C8—C13—H13 | 120.7 | H28A—C28—H28C | 109.5 |
C12—C13—H13 | 120.7 | H28B—C28—H28C | 109.5 |
C2—N1—C1—N2 | −12.6 (4) | C16—N3—C15—N4 | −5.1 (4) |
C2—N1—C1—S1 | 168.88 (18) | C16—N3—C15—S2 | 176.2 (2) |
C4—N2—C1—N1 | −7.6 (3) | C18—N4—C15—N3 | −6.2 (4) |
C8—N2—C1—N1 | 175.5 (2) | C22—N4—C15—N3 | 172.5 (2) |
C4—N2—C1—S1 | 170.90 (17) | C18—N4—C15—S2 | 172.50 (19) |
C8—N2—C1—S1 | −6.0 (3) | C22—N4—C15—S2 | −8.8 (3) |
C1—N1—C2—C3 | 25.6 (3) | C15—N3—C16—C17 | 13.6 (4) |
C1—N1—C2—C5 | 146.8 (2) | C15—N3—C16—C20 | 135.1 (3) |
C1—N1—C2—C6 | −94.7 (3) | C15—N3—C16—C19 | −105.9 (3) |
N1—C2—C3—C4 | −21.0 (3) | N3—C16—C17—C18 | −12.5 (4) |
C5—C2—C3—C4 | −139.2 (3) | C20—C16—C17—C18 | −131.6 (3) |
C6—C2—C3—C4 | 98.0 (3) | C19—C16—C17—C18 | 106.6 (3) |
C2—C3—C4—N2 | 5.3 (4) | C16—C17—C18—N4 | 3.8 (5) |
C2—C3—C4—C7 | −175.9 (2) | C16—C17—C18—C21 | −176.6 (3) |
C1—N2—C4—C3 | 11.0 (3) | C15—N4—C18—C17 | 6.8 (4) |
C8—N2—C4—C3 | −172.1 (2) | C22—N4—C18—C17 | −171.9 (3) |
C1—N2—C4—C7 | −167.8 (2) | C15—N4—C18—C21 | −172.8 (3) |
C8—N2—C4—C7 | 9.1 (3) | C22—N4—C18—C21 | 8.5 (4) |
C1—N2—C8—C9 | 94.8 (3) | C15—N4—C22—C23 | 100.7 (3) |
C4—N2—C8—C9 | −82.2 (3) | C18—N4—C22—C23 | −80.6 (3) |
C1—N2—C8—C13 | −85.9 (3) | C15—N4—C22—C27 | −83.1 (3) |
C4—N2—C8—C13 | 97.1 (3) | C18—N4—C22—C27 | 95.6 (3) |
C13—C8—C9—C10 | 0.1 (4) | C27—C22—C23—C24 | −0.2 (4) |
N2—C8—C9—C10 | 179.3 (2) | N4—C22—C23—C24 | 175.8 (2) |
C8—C9—C10—C11 | 1.4 (3) | C22—C23—C24—C25 | 0.2 (4) |
C8—C9—C10—C14 | −177.9 (2) | C22—C23—C24—C28 | −179.5 (2) |
C9—C10—C11—C12 | −1.8 (4) | C23—C24—C25—C26 | 0.4 (4) |
C14—C10—C11—C12 | 177.4 (2) | C28—C24—C25—C26 | −179.9 (3) |
C10—C11—C12—C13 | 0.8 (4) | C24—C25—C26—C27 | −0.9 (4) |
C9—C8—C13—C12 | −1.2 (4) | C23—C22—C27—C26 | −0.2 (4) |
N2—C8—C13—C12 | 179.5 (2) | N4—C22—C27—C26 | −176.4 (2) |
C11—C12—C13—C8 | 0.8 (3) | C25—C26—C27—C22 | 0.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···S2 | 0.88 | 2.62 | 3.419 (2) | 151 |
N3—H3N···S1 | 0.88 | 2.60 | 3.447 (2) | 163 |
Experimental details
Crystal data | |
Chemical formula | C14H18N2S |
Mr | 246.36 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 173 |
a, b, c (Å) | 10.5904 (3), 16.9189 (5), 30.5713 (10) |
V (Å3) | 5477.7 (3) |
Z | 16 |
Radiation type | Mo Kα |
µ (mm−1) | 0.22 |
Crystal size (mm) | 0.14 × 0.12 × 0.08 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SORTAV; Blessing, 1997) |
Tmin, Tmax | 0.970, 0.983 |
No. of measured, independent and observed [I > 2.0σ(I)] reflections | 19135, 4830, 3231 |
Rint | 0.041 |
(sin θ/λ)max (Å−1) | 0.601 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.115, 1.04 |
No. of reflections | 4830 |
No. of parameters | 315 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.23 |
Computer programs: COLLECT (Hooft, 1998), HKL DENZO (Otwinowski & Minor, 1997), SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···S2 | 0.88 | 2.62 | 3.419 (2) | 151 |
N3—H3N···S1 | 0.88 | 2.60 | 3.447 (2) | 163 |
Acknowledgements
The authors gratefully acknowledge a research grant from the Higher Education Commission of Pakistan under project No. 20-Miscel/R&D/00/3834.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound C14H18N2S (I) belongs to a novel and rare class of dihydropyrimidine-2-thiones. Their synthesis has been attracting widespread attention because of their diverse pharmacological properties such as antibacterial (Alam et al., 2005), antitumour (Swamy et al., 2005) and antioxidative activities (Sriram et al., 2006). The crystal structure of a closely related compound, 4,4,6-trimethyl-1-phenyl-3,4-dihydropyrimidine-2(1H)-thione (Yamin et al., 2005) and its triclinic polymorph (Ismail et al., 2007) have been reported.
The asymmetric unit of the title compound is composed of two molecules (Fig. 1) exhibiting intermolecular hydrogen bonds of the type N—H···S (Table 1) forming cyclic dimers [graph set R22(8) (Etter et al., 1990)]. The two molecules are conformationally similar [e.g. the inter-ring torsion angle C1–N2–C8–C13 (molecule 1), -83.1 (3)° and C15–N4–C22–C27, -85.9 (3)° (molecule 2)] and are related by pseudo two-fold rotational symmetry. The title compound is isomorphous with one of the polymorphs of 4,4,6-trimethyl-1-phenyl-3,4-dihydropyrimidine-2(1H)-thione (Yamin et al., 2005). However, in the triclinic polymorph of this related compound (Ismail et al., 2007), which also forms a cyclic dimer, the two molecules have crystallographic inversion symmetry.