metal-organic compounds
Bis(7-methoxy-1-methyl-4,9-dihydro-3H-β-carbolinium) tetrachloridozincate
aTashkent Chemical-Technological Institute, Navoi St 32, Tashkent 100011, Uzbekistan, bNational University of Uzbekistan, Tashkent 100123, Uzbekistan, and cInstitute of Biorganic Chemistry, Mirzo-Ulugbek St. 83, Tashkent 100125, Uzbekistan
*Correspondence e-mail: zuhra_kadirova@yahoo.com
In the title compound, (C13H15N2O)2[ZnCl4], also known as di(harmalinium) tetrachloridozincate, the ZnII atom is in a distorted tetrahedral coordination of the chlorido ligands. In the cation, the methoxy and methyl groups are both coplanar with with rings to which they are attached [maximum deviations of 0.232 (4) and 0.259 (4) Å, respectively]. In the crystal, the alkaloid cations and metal complex anions interact by way of N—H⋯Cl hydrogen bonds involving each Cl atom, resulting in a network structure.
Related literature
For the activity of metal complexes with harmaline (7-methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indole), see: Al-Allaf et al. (1990). For the structures of harmaline and related compounds, see: Reimers et al. (1984); Wouters (1997); Ferretti et al. (2004). For zincate anions, see: Ma et al. (2009).
Experimental
Crystal data
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Data collection
Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810010822/bv2139sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810010822/bv2139Isup2.hkl
The ZnCl2 (1 mmol) and harmaline (2.5 mmol) were heated on water bath in 2M solution of hydrochloric acid in ethanol. The resulting solution yielded colourless crystals which were filtered off and washed twice with acetone. Elem. Analysis found: C 49.0, H 4.7, N 8.8, Zn 10.3%; requires: C 49.0, H 4.7, N 8.8, Zn 10.3%. Crystals of the title compound, suitable to X-ray
were selected directly from the sample as prepared.All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for
R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.All the H-atoms were included in calculated positions [N—H = 0.88 Å, C—H = 0.93 - 0.96 Å] and treated as riding atoms [Uiso(H) = k × Ueq(parent atom], where k = 1.2 for NH2 and CH H atoms and 1.5 for methyl H atomshydrogens].
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis PRO (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).(C13H15N2O)2[ZnCl4] | F(000) = 1312 |
Mr = 637.71 | Dx = 1.521 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54184 Å |
a = 11.2314 (2) Å | Cell parameters from 4954 reflections |
b = 19.1274 (2) Å | θ = 4.1–71.0° |
c = 13.5614 (2) Å | µ = 5.01 mm−1 |
β = 107.0797 (16)° | T = 293 K |
V = 2784.87 (7) Å3 | Monoclinic, colourless |
Z = 4 | 0.25 × 0.12 × 0.08 mm |
Oxford Diffraction Xcalibur diffractometer | 3724 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.035 |
Graphite monochromator | θmax = 71.0°, θmin = 4.1° |
heavy atom scans | h = −11→13 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) | k = −18→22 |
Tmin = 0.544, Tmax = 0.644 | l = −16→16 |
12418 measured reflections | 3 standard reflections every 120 reflections |
4954 independent reflections | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0588P)2 + 1.2361P] where P = (Fo2 + 2Fc2)/3 |
4954 reflections | (Δ/σ)max < 0.001 |
334 parameters | Δρmax = 0.54 e Å−3 |
0 restraints | Δρmin = −0.46 e Å−3 |
0 constraints |
(C13H15N2O)2[ZnCl4] | V = 2784.87 (7) Å3 |
Mr = 637.71 | Z = 4 |
Monoclinic, P21/c | Cu Kα radiation |
a = 11.2314 (2) Å | µ = 5.01 mm−1 |
b = 19.1274 (2) Å | T = 293 K |
c = 13.5614 (2) Å | 0.25 × 0.12 × 0.08 mm |
β = 107.0797 (16)° |
Oxford Diffraction Xcalibur diffractometer | 3724 reflections with I > 2σ(I) |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) | Rint = 0.035 |
Tmin = 0.544, Tmax = 0.644 | 3 standard reflections every 120 reflections |
12418 measured reflections | intensity decay: none |
4954 independent reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.54 e Å−3 |
4954 reflections | Δρmin = −0.46 e Å−3 |
334 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.76391 (4) | 0.05281 (2) | 0.78045 (4) | 0.04473 (15) | |
Cl1 | 0.80185 (10) | 0.14137 (5) | 0.68163 (7) | 0.0583 (3) | |
Cl2 | 0.90754 (9) | −0.03331 (5) | 0.80919 (8) | 0.0623 (3) | |
Cl3 | 0.57608 (8) | 0.00479 (5) | 0.70451 (9) | 0.0678 (3) | |
Cl4 | 0.77170 (12) | 0.10536 (5) | 0.93383 (8) | 0.0734 (3) | |
O1 | 0.1080 (2) | 0.18482 (13) | 0.5051 (2) | 0.0595 (7) | |
N1 | 0.0972 (2) | −0.04362 (13) | 0.6637 (2) | 0.0402 (6) | |
H1A | 0.0414 | −0.0400 | 0.6953 | 0.048* | |
N2 | 0.2328 (3) | −0.21801 (15) | 0.6886 (2) | 0.0480 (7) | |
H2A | 0.2367 | −0.2566 | 0.7221 | 0.058* | |
C1 | 0.1660 (3) | −0.10271 (17) | 0.6593 (2) | 0.0400 (7) | |
C2 | 0.1632 (3) | −0.16743 (17) | 0.7074 (3) | 0.0444 (8) | |
C3 | 0.3039 (3) | −0.21253 (19) | 0.6142 (3) | 0.0540 (9) | |
H3A | 0.2531 | −0.2301 | 0.5482 | 0.065* | |
H3B | 0.3768 | −0.2423 | 0.6369 | 0.065* | |
C4 | 0.3451 (3) | −0.14021 (19) | 0.5997 (3) | 0.0508 (9) | |
H4A | 0.4222 | −0.1300 | 0.6529 | 0.061* | |
H4B | 0.3613 | −0.1370 | 0.5334 | 0.061* | |
C5 | 0.2495 (3) | −0.08782 (17) | 0.6044 (2) | 0.0390 (7) | |
C6 | 0.2285 (3) | −0.01784 (17) | 0.5711 (2) | 0.0388 (7) | |
C7 | 0.2806 (3) | 0.02628 (19) | 0.5116 (2) | 0.0476 (8) | |
H7A | 0.3440 | 0.0104 | 0.4860 | 0.057* | |
C8 | 0.2367 (3) | 0.0920 (2) | 0.4926 (3) | 0.0521 (9) | |
H8A | 0.2696 | 0.1214 | 0.4526 | 0.063* | |
C9 | 0.1411 (3) | 0.11741 (18) | 0.5325 (2) | 0.0451 (8) | |
C10 | 0.0876 (3) | 0.07649 (17) | 0.5905 (2) | 0.0402 (7) | |
H10A | 0.0247 | 0.0932 | 0.6161 | 0.048* | |
C11 | 0.1329 (3) | 0.00793 (16) | 0.6094 (2) | 0.0357 (7) | |
C12 | 0.0871 (4) | −0.1803 (2) | 0.7790 (3) | 0.0640 (11) | |
H12A | 0.0985 | −0.2277 | 0.8032 | 0.096* | |
H12B | 0.0007 | −0.1725 | 0.7433 | 0.096* | |
H12C | 0.1130 | −0.1490 | 0.8367 | 0.096* | |
C13 | 0.0274 (4) | 0.2179 (2) | 0.5539 (3) | 0.0582 (10) | |
H13A | 0.0111 | 0.2649 | 0.5286 | 0.087* | |
H13B | 0.0661 | 0.2188 | 0.6271 | 0.087* | |
H13C | −0.0495 | 0.1925 | 0.5389 | 0.087* | |
N3 | 0.3936 (3) | 0.10991 (15) | 0.7707 (2) | 0.0473 (7) | |
H3C | 0.4395 | 0.0784 | 0.7550 | 0.057* | |
N4 | 0.2175 (3) | 0.03927 (17) | 0.9329 (2) | 0.0573 (8) | |
H4C | 0.2128 | 0.0035 | 0.9700 | 0.069* | |
O2 | 0.4732 (3) | 0.32178 (13) | 0.5990 (2) | 0.0626 (7) | |
C14 | 0.3153 (3) | 0.10024 (18) | 0.8312 (2) | 0.0437 (8) | |
C15 | 0.3010 (3) | 0.03874 (19) | 0.8826 (3) | 0.0482 (8) | |
C16 | 0.1328 (5) | 0.0970 (2) | 0.9292 (4) | 0.0863 (15) | |
H16A | 0.0549 | 0.0866 | 0.8771 | 0.104* | |
H16B | 0.1153 | 0.0994 | 0.9950 | 0.104* | |
C17 | 0.1742 (4) | 0.1655 (2) | 0.9072 (3) | 0.0649 (11) | |
H17A | 0.2174 | 0.1882 | 0.9717 | 0.078* | |
H17B | 0.1019 | 0.1937 | 0.8734 | 0.078* | |
C18 | 0.2582 (3) | 0.16256 (18) | 0.8406 (2) | 0.0442 (8) | |
C19 | 0.3027 (3) | 0.21319 (18) | 0.7847 (2) | 0.0422 (7) | |
C20 | 0.2842 (3) | 0.28532 (19) | 0.7657 (3) | 0.0495 (8) | |
H20A | 0.2319 | 0.3102 | 0.7949 | 0.059* | |
C21 | 0.3427 (3) | 0.31842 (18) | 0.7049 (3) | 0.0508 (9) | |
H21A | 0.3302 | 0.3661 | 0.6926 | 0.061* | |
C22 | 0.4230 (3) | 0.28139 (18) | 0.6597 (3) | 0.0474 (8) | |
C23 | 0.4460 (3) | 0.21113 (18) | 0.6765 (3) | 0.0462 (8) | |
H23A | 0.4988 | 0.1870 | 0.6470 | 0.055* | |
C24 | 0.3857 (3) | 0.17796 (17) | 0.7401 (2) | 0.0418 (7) | |
C25 | 0.3748 (4) | −0.0254 (2) | 0.8814 (3) | 0.0622 (10) | |
H25A | 0.3504 | −0.0613 | 0.9209 | 0.093* | |
H25B | 0.4618 | −0.0154 | 0.9108 | 0.093* | |
H25C | 0.3601 | −0.0410 | 0.8115 | 0.093* | |
C26 | 0.5400 (4) | 0.2872 (2) | 0.5392 (3) | 0.0639 (11) | |
H26A | 0.5706 | 0.3211 | 0.5003 | 0.096* | |
H26B | 0.4858 | 0.2550 | 0.4929 | 0.096* | |
H26C | 0.6090 | 0.2622 | 0.5841 | 0.096* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0481 (3) | 0.0351 (2) | 0.0585 (3) | 0.0031 (2) | 0.0273 (2) | 0.0015 (2) |
Cl1 | 0.0841 (6) | 0.0390 (5) | 0.0623 (5) | −0.0064 (4) | 0.0377 (5) | 0.0017 (4) |
Cl2 | 0.0606 (5) | 0.0537 (5) | 0.0827 (6) | 0.0188 (4) | 0.0365 (5) | 0.0093 (5) |
Cl3 | 0.0475 (5) | 0.0542 (6) | 0.1095 (8) | −0.0051 (4) | 0.0350 (5) | −0.0148 (6) |
Cl4 | 0.1199 (9) | 0.0529 (6) | 0.0611 (5) | 0.0163 (6) | 0.0481 (6) | 0.0022 (5) |
O1 | 0.0744 (17) | 0.0393 (14) | 0.0765 (17) | 0.0082 (13) | 0.0404 (15) | 0.0158 (13) |
N1 | 0.0428 (14) | 0.0343 (15) | 0.0504 (15) | −0.0003 (12) | 0.0241 (12) | 0.0002 (12) |
N2 | 0.0563 (17) | 0.0316 (15) | 0.0590 (16) | 0.0076 (13) | 0.0214 (14) | 0.0037 (13) |
C1 | 0.0412 (17) | 0.0359 (17) | 0.0420 (16) | −0.0014 (14) | 0.0111 (14) | 0.0004 (14) |
C2 | 0.0469 (18) | 0.0370 (18) | 0.0516 (19) | −0.0035 (16) | 0.0179 (15) | −0.0037 (15) |
C3 | 0.050 (2) | 0.048 (2) | 0.065 (2) | 0.0071 (17) | 0.0193 (18) | −0.0009 (19) |
C4 | 0.056 (2) | 0.046 (2) | 0.055 (2) | 0.0059 (17) | 0.0230 (17) | −0.0025 (17) |
C5 | 0.0387 (16) | 0.0397 (18) | 0.0395 (16) | −0.0007 (14) | 0.0129 (14) | −0.0052 (14) |
C6 | 0.0418 (17) | 0.0381 (18) | 0.0365 (15) | −0.0017 (14) | 0.0117 (13) | −0.0052 (14) |
C7 | 0.0515 (19) | 0.051 (2) | 0.0470 (18) | 0.0020 (17) | 0.0254 (16) | 0.0018 (17) |
C8 | 0.056 (2) | 0.054 (2) | 0.0528 (19) | −0.0036 (18) | 0.0251 (17) | 0.0096 (18) |
C9 | 0.052 (2) | 0.0370 (18) | 0.0459 (17) | −0.0005 (16) | 0.0145 (15) | 0.0049 (15) |
C10 | 0.0418 (17) | 0.0360 (17) | 0.0445 (17) | −0.0007 (14) | 0.0154 (14) | 0.0003 (14) |
C11 | 0.0390 (16) | 0.0323 (16) | 0.0364 (15) | −0.0045 (13) | 0.0121 (13) | −0.0008 (13) |
C12 | 0.079 (3) | 0.041 (2) | 0.087 (3) | 0.007 (2) | 0.048 (2) | 0.015 (2) |
C13 | 0.060 (2) | 0.046 (2) | 0.071 (2) | 0.0085 (18) | 0.0224 (19) | 0.0100 (19) |
N3 | 0.0495 (16) | 0.0385 (16) | 0.0592 (16) | 0.0045 (13) | 0.0243 (14) | −0.0017 (14) |
N4 | 0.070 (2) | 0.0500 (19) | 0.0582 (17) | −0.0025 (16) | 0.0281 (16) | 0.0031 (15) |
O2 | 0.0742 (17) | 0.0449 (15) | 0.0789 (17) | −0.0053 (13) | 0.0384 (15) | −0.0002 (14) |
C14 | 0.0442 (18) | 0.0416 (19) | 0.0452 (17) | −0.0028 (15) | 0.0127 (15) | −0.0054 (15) |
C15 | 0.053 (2) | 0.045 (2) | 0.0451 (18) | −0.0054 (16) | 0.0107 (16) | −0.0062 (16) |
C16 | 0.096 (3) | 0.070 (3) | 0.119 (4) | 0.004 (3) | 0.071 (3) | 0.008 (3) |
C17 | 0.072 (3) | 0.061 (3) | 0.075 (3) | 0.007 (2) | 0.041 (2) | −0.001 (2) |
C18 | 0.0444 (18) | 0.046 (2) | 0.0421 (17) | −0.0009 (16) | 0.0124 (15) | −0.0087 (15) |
C19 | 0.0414 (17) | 0.0404 (18) | 0.0440 (17) | 0.0019 (14) | 0.0114 (14) | −0.0082 (15) |
C20 | 0.051 (2) | 0.0395 (19) | 0.060 (2) | 0.0088 (16) | 0.0193 (17) | −0.0090 (17) |
C21 | 0.059 (2) | 0.0306 (17) | 0.063 (2) | 0.0016 (16) | 0.0180 (18) | −0.0051 (17) |
C22 | 0.0457 (18) | 0.0406 (19) | 0.0560 (19) | −0.0041 (16) | 0.0155 (16) | −0.0038 (16) |
C23 | 0.0437 (18) | 0.0421 (19) | 0.0550 (19) | 0.0021 (16) | 0.0179 (16) | −0.0051 (16) |
C24 | 0.0388 (17) | 0.0348 (18) | 0.0495 (18) | 0.0004 (14) | 0.0094 (14) | −0.0061 (15) |
C25 | 0.077 (3) | 0.045 (2) | 0.068 (2) | 0.006 (2) | 0.026 (2) | 0.0060 (19) |
C26 | 0.069 (3) | 0.061 (3) | 0.072 (2) | −0.002 (2) | 0.037 (2) | 0.001 (2) |
Zn1—Cl3 | 2.2536 (10) | C14—C18 | 1.377 (5) |
Zn1—Cl2 | 2.2580 (10) | C14—C15 | 1.400 (5) |
Zn1—Cl1 | 2.2765 (9) | C15—C25 | 1.484 (5) |
Zn1—Cl4 | 2.2885 (10) | C16—C17 | 1.449 (6) |
O1—C9 | 1.363 (4) | C17—C18 | 1.487 (5) |
O1—C13 | 1.417 (4) | C18—C19 | 1.409 (5) |
N1—C11 | 1.359 (4) | C19—C20 | 1.407 (5) |
N1—C1 | 1.380 (4) | C19—C24 | 1.422 (4) |
N2—C2 | 1.315 (4) | C20—C21 | 1.353 (5) |
N2—C3 | 1.463 (4) | C21—C22 | 1.420 (5) |
C1—C5 | 1.388 (4) | C22—C23 | 1.375 (5) |
C1—C2 | 1.404 (4) | C23—C24 | 1.396 (5) |
C2—C12 | 1.491 (5) | N1—H1A | 0.86 |
C3—C4 | 1.490 (5) | N2—H2A | 0.86 |
C4—C5 | 1.484 (4) | C3—H3A | 0.97 |
C5—C6 | 1.410 (5) | C3—H3B | 0.97 |
C6—C7 | 1.407 (4) | C4—H4A | 0.97 |
C6—C11 | 1.412 (4) | C4—H4B | 0.97 |
C7—C8 | 1.348 (5) | C7—H7A | 0.93 |
C8—C9 | 1.422 (5) | C8—H8A | 0.93 |
C9—C10 | 1.367 (4) | C10—H10A | 0.93 |
C10—C11 | 1.403 (4) | C12—H12A | 0.96 |
N3—C24 | 1.361 (4) | C12—H12B | 0.96 |
N3—C14 | 1.381 (4) | C12—H12C | 0.96 |
N4—C15 | 1.312 (5) | C13—H13A | 0.96 |
N4—C16 | 1.450 (5) | C13—H13B | 0.96 |
O2—C22 | 1.365 (4) | C13—H13C | 0.96 |
O2—C26 | 1.420 (4) | ||
Cl3—Zn1—Cl2 | 107.88 (4) | C19—C18—C17 | 133.6 (3) |
Cl3—Zn1—Cl1 | 110.26 (4) | C20—C19—C18 | 135.7 (3) |
Cl2—Zn1—Cl1 | 113.37 (4) | C20—C19—C24 | 117.8 (3) |
Cl3—Zn1—Cl4 | 112.03 (4) | C18—C19—C24 | 106.5 (3) |
Cl2—Zn1—Cl4 | 109.20 (4) | C21—C20—C19 | 119.9 (3) |
Cl1—Zn1—Cl4 | 104.15 (4) | C20—C21—C22 | 120.9 (3) |
C9—O1—C13 | 117.1 (3) | O2—C22—C23 | 124.2 (3) |
C11—N1—C1 | 108.2 (2) | O2—C22—C21 | 113.9 (3) |
C2—N2—C3 | 123.8 (3) | C23—C22—C21 | 121.9 (3) |
N1—C1—C5 | 109.3 (3) | C22—C23—C24 | 116.4 (3) |
N1—C1—C2 | 127.8 (3) | N3—C24—C23 | 128.5 (3) |
C5—C1—C2 | 122.8 (3) | N3—C24—C19 | 108.4 (3) |
N2—C2—C1 | 117.6 (3) | C23—C24—C19 | 123.1 (3) |
N2—C2—C12 | 119.5 (3) | C1—N1—H1A | 126 |
C1—C2—C12 | 122.9 (3) | C11—N1—H1A | 126 |
N2—C3—C4 | 114.3 (3) | C2—N2—H2A | 118 |
C5—C4—C3 | 111.4 (3) | C3—N2—H2A | 118 |
C1—C5—C6 | 106.9 (3) | N2—C3—H3A | 109 |
C1—C5—C4 | 119.7 (3) | N2—C3—H3B | 109 |
C6—C5—C4 | 133.0 (3) | C4—C3—H3A | 109 |
C7—C6—C5 | 134.0 (3) | C4—C3—H3B | 109 |
C7—C6—C11 | 119.4 (3) | H3A—C3—H3B | 108 |
C5—C6—C11 | 106.7 (3) | C3—C4—H4A | 109 |
C8—C7—C6 | 118.6 (3) | C3—C4—H4B | 109 |
C7—C8—C9 | 121.4 (3) | C5—C4—H4A | 109 |
O1—C9—C10 | 124.6 (3) | C5—C4—H4B | 109 |
O1—C9—C8 | 113.3 (3) | H4A—C4—H4B | 108 |
C10—C9—C8 | 122.1 (3) | C6—C7—H7A | 121 |
C9—C10—C11 | 116.3 (3) | C8—C7—H7A | 121 |
N1—C11—C10 | 128.9 (3) | C7—C8—H8A | 119 |
N1—C11—C6 | 108.8 (3) | C9—C8—H8A | 119 |
C10—C11—C6 | 122.2 (3) | C9—C10—H10A | 122 |
C24—N3—C14 | 108.3 (3) | C11—C10—H10A | 122 |
C15—N4—C16 | 123.4 (3) | C2—C12—H12A | 110 |
C22—O2—C26 | 117.5 (3) | C2—C12—H12B | 109 |
C18—C14—N3 | 109.5 (3) | C2—C12—H12C | 109 |
C18—C14—C15 | 123.8 (3) | H12A—C12—H12B | 109 |
N3—C14—C15 | 126.5 (3) | H12A—C12—H12C | 109 |
N4—C15—C14 | 117.1 (3) | H12B—C12—H12C | 109 |
N4—C15—C25 | 120.0 (3) | O1—C13—H13A | 109 |
C14—C15—C25 | 122.9 (3) | O1—C13—H13B | 109 |
C17—C16—N4 | 116.7 (4) | O1—C13—H13C | 109 |
C16—C17—C18 | 113.0 (3) | H13A—C13—H13B | 109 |
C14—C18—C19 | 107.3 (3) | H13A—C13—H13C | 109 |
C14—C18—C17 | 119.0 (3) | H13B—C13—H13C | 110 |
C13—O1—C9—C8 | −170.7 (3) | C3—C4—C5—C6 | −161.5 (3) |
C13—O1—C9—C10 | 10.7 (4) | C1—C5—C6—C7 | −178.5 (3) |
C11—N1—C1—C2 | 177.5 (3) | C1—C5—C6—C11 | 1.1 (3) |
C11—N1—C1—C5 | 2.0 (3) | C4—C5—C6—C7 | 8.2 (6) |
C1—N1—C11—C6 | −1.3 (3) | C4—C5—C6—C11 | −172.2 (3) |
C1—N1—C11—C10 | 178.6 (3) | C5—C6—C7—C8 | 179.2 (3) |
C3—N2—C2—C1 | −5.5 (5) | C11—C6—C7—C8 | −0.4 (4) |
C3—N2—C2—C12 | 175.5 (3) | C5—C6—C11—N1 | 0.1 (3) |
C2—N2—C3—C4 | 29.2 (5) | C5—C6—C11—C10 | −179.83 |
N1—C1—C2—N2 | 176.8 (3) | C7—C6—C11—N1 | 179.8 (3) |
N1—C1—C2—C12 | −4.2 (6) | C7—C6—C11—C10 | −0.2 (4) |
C5—C1—C2—N2 | −8.3 (5) | C6—C7—C8—C9 | 0.9 (5) |
C5—C1—C2—C12 | 170.7 (3) | C7—C8—C9—O1 | −179.7 (3) |
N1—C1—C5—C4 | 172.5 (3) | C7—C8—C9—C10 | −1.1 (5) |
N1—C1—C5—C6 | −1.9 (3) | O1—C9—C10—C11 | 179.0 (3) |
C2—C1—C5—C4 | −3.3 (5) | C8—C9—C10—C11 | 0.5 (4) |
C2—C1—C5—C6 | −177.7 (3) | C9—C10—C11—N1 | −179.8 (3) |
N2—C3—C4—C5 | −36.8 (4) | C9—C10—C11—C6 | 0.1 (4) |
C3—C4—C5—C1 | 25.9 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl2i | 0.86 | 2.45 | 3.307 (3) | 171 |
N2—H2A···Cl1ii | 0.86 | 2.46 | 3.299 (3) | 166 |
N3—H3C···Cl3 | 0.86 | 2.33 | 3.183 (3) | 173 |
N4—H4C···Cl4iii | 0.86 | 2.44 | 3.287 (3) | 170 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y−1/2, −z+3/2; (iii) −x+1, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | (C13H15N2O)2[ZnCl4] |
Mr | 637.71 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 11.2314 (2), 19.1274 (2), 13.5614 (2) |
β (°) | 107.0797 (16) |
V (Å3) | 2784.87 (7) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 5.01 |
Crystal size (mm) | 0.25 × 0.12 × 0.08 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.544, 0.644 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12418, 4954, 3724 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.613 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.116, 1.04 |
No. of reflections | 4954 |
No. of parameters | 334 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.54, −0.46 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl2i | 0.86 | 2.45 | 3.307 (3) | 171 |
N2—H2A···Cl1ii | 0.86 | 2.46 | 3.299 (3) | 166 |
N3—H3C···Cl3 | 0.86 | 2.33 | 3.183 (3) | 173 |
N4—H4C···Cl4iii | 0.86 | 2.44 | 3.287 (3) | 170 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y−1/2, −z+3/2; (iii) −x+1, −y, −z+2. |
Acknowledgements
This work was supported by a grant from the Fundamental Research Center of Science and Technology, Republic of Uzbekistan (F 3-142).
References
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The metal complexes of the harmaline (7-methoxy-1-methyl-4,9-dihydro-3H-β-carboline) and other carboline alkaloids have biological activity (Al-Allaf et al. 1990). In this study we synthesized the molecular salt containing a zinc-chlorido complex and harmalinium cations, and report the structure of the title compound, (I).
The molecular structure is shown on Fig.1 and geometrical parameters are available from archived CIF.
Zinc ions are anions [ZnCl4]2- have distorted tetragonal configuration (Sutherland et al., 2009) and the valence angles are close to tetrahedral, being in the ranges 104.15 (4)-113.37 (4)°. The Zn—Cl bonds are not equal and values of bond lengths, being in the range 2.2536 (10)-2.2885 (10)Å .
Bond lengths and angles in the cations do not differ from their normal values. The alkaloid molecules are in a protonated form and the proton is localized at the nitrogen atom in the carboline ring as observed previously in structure of harmaline hydrochloride (Ferretti et al., 2004; Wouters, 1997). Protonization leads to a decrease in CH2— CH2 and C═N bond lengths in comparison with the harmaline structure (Reimers et al., 1984). In the pyrrole cycle C—NH bond lengths are not equivalent as distinctions are expressed in a greater degree than for the harmaline crystal structure (Reimers et al., 1984). Both methoxy and methyl groups are located in the plane of the pyrrole and benzole rings and the carboline ring has a noncoplanar conformation with the torsion angles shown in the table 1. The sp3-hybridizied carbon atoms in the cycle being displaced from the mean plane of carboline cycle by -0.286 (4), - 0.199 (4), 0.257 (5) and -0.090 (4) Å for C3, C4, C16, C17, respectively.
Unlike the parent harmaline structure (Reimers et al., 1984) in which only one hydrogen bond is present, in case of compound I a network of hydrogen bonds is formed (Fig.2) as in case of harmine hydrochloride where hydrogen bonds are formed between NH-groups as acceptors and chlorine atoms as donors of electrons (Ferretti et al., 2004; Wouters, 1997).