organic compounds
12-(4-Methoxyphenyl)-10-phenyl-3,4,5,6,8,10-hexaazatricyclo[7.3.0.02,6]dodeca-1(9),2,4,7,11-pentaene
aDepartment of Physics, Bhavan's Sheth R. A. College of Science, Ahmedabad, Gujarat 380 001, India, bDepartment of Chemistry, M. G. Science Institute, Navrangpura, Ahmedabad, Gujarat 380 009, India, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
In the title compound, C19H14N6O, the fused 12-membered tetrazolo/pyrimidine/pyrrole ring system is almost planar (r.m.s. deviation = 0.013 Å). The 4-methoxyphenyl and phenyl substituents on the pyrrole ring are both twisted with respect to the fused-ring system [dihedral angles = 25.39 (18) and 36.42 (18)°, respectively]. Intramolecular C—H⋯N interactions occur. In the crystal, molecules pack into layers in the ac plane and these are connected along the b axis via C—H⋯π and π–π [centroid–centroid separation = 3.608 (3) Å] interactions.
Related literature
For background to the biological activity of fused tetrazolopyrimidines, see: Shishoo & Jain (1992); Desai & Shah (2006). For related structures, see: Jotani et al. (2010a,b); Shah et al. (2010). For semi-empirical quantum chemical calculations, see: Stewart (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S160053681000869X/hb5355sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681000869X/hb5355Isup2.hkl
To a well stirred mixture of 5-(4-methoxyphenyl)-7-phenyl-4-chloro-7H-pyrrolo[2,3-d]pyrimidine (5 mmol) and Aliquat 336 (0.5 mmol) in toluene (25 ml) was added sodium azide (6 mmol) in water (5 ml). The reaction mixture was stirred under reflux conditions for 1.5 h. Thereafter, the two phases were separated. The aqueous phase was extracted with toluene and the combined organic layers were washed with water. The excess solvent was distilled off under reduced pressure. The obtained solid was dried to yield (I) which was crystallized from dioxane to obtain the final product (70 % yield, m.pt. 489–491 K). The crystals used for X-ray crystallography were obtained by slow evaporation from the an ethanol solution of (I).
The C-bound H atoms were geometrically placed (C–H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.2–1.5Ueq(parent atom). In the absence of significant
effects, 1378 Friedel pairs were averaged in the final refinement.Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C19H14N6O | F(000) = 712 |
Mr = 342.36 | Dx = 1.440 Mg m−3 |
Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2n | Cell parameters from 2330 reflections |
a = 9.3537 (7) Å | θ = 2.0–32.0° |
b = 23.6045 (19) Å | µ = 0.10 mm−1 |
c = 7.1543 (6) Å | T = 293 K |
V = 1579.6 (2) Å3 | Block, colourless |
Z = 4 | 0.35 × 0.25 × 0.20 mm |
Bruker Kappa APEXII CCD diffractometer | 1666 independent reflections |
Radiation source: fine-focus sealed tube | 1344 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.051 |
ω and ϕ scan | θmax = 25.9°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→10 |
Tmin = 0.967, Tmax = 0.981 | k = −28→26 |
16155 measured reflections | l = −8→8 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.0924P)2 + 0.1003P] where P = (Fo2 + 2Fc2)/3 |
1666 reflections | (Δ/σ)max = 0.001 |
236 parameters | Δρmax = 0.50 e Å−3 |
1 restraint | Δρmin = −0.27 e Å−3 |
C19H14N6O | V = 1579.6 (2) Å3 |
Mr = 342.36 | Z = 4 |
Orthorhombic, Pna21 | Mo Kα radiation |
a = 9.3537 (7) Å | µ = 0.10 mm−1 |
b = 23.6045 (19) Å | T = 293 K |
c = 7.1543 (6) Å | 0.35 × 0.25 × 0.20 mm |
Bruker Kappa APEXII CCD diffractometer | 1666 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1344 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.981 | Rint = 0.051 |
16155 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 1 restraint |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.50 e Å−3 |
1666 reflections | Δρmin = −0.27 e Å−3 |
236 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.1311 (2) | −0.24532 (10) | 0.1991 (5) | 0.0436 (7) | |
N1 | 0.6887 (3) | 0.03688 (12) | 0.2217 (6) | 0.0388 (7) | |
N2 | 0.8226 (3) | 0.01376 (15) | 0.2170 (8) | 0.0538 (9) | |
N3 | 0.8028 (3) | −0.04038 (15) | 0.2108 (8) | 0.0570 (10) | |
N4 | 0.6627 (3) | −0.05488 (13) | 0.2095 (7) | 0.0490 (9) | |
N5 | 0.5225 (3) | 0.11037 (11) | 0.2330 (6) | 0.0394 (8) | |
N6 | 0.2784 (3) | 0.07783 (11) | 0.2260 (5) | 0.0345 (7) | |
C1 | 0.6538 (4) | 0.09319 (16) | 0.2303 (7) | 0.0434 (9) | |
H1 | 0.7269 | 0.1199 | 0.2342 | 0.052* | |
C2 | 0.5911 (3) | −0.00622 (14) | 0.2167 (8) | 0.0368 (8) | |
C3 | 0.4447 (3) | 0.00972 (13) | 0.2204 (7) | 0.0326 (7) | |
C4 | 0.4226 (3) | 0.06828 (13) | 0.2276 (7) | 0.0338 (8) | |
C5 | 0.2112 (3) | 0.02605 (13) | 0.2160 (7) | 0.0374 (8) | |
H5 | 0.1126 | 0.0211 | 0.2128 | 0.045* | |
C6 | 0.3086 (3) | −0.01734 (14) | 0.2112 (7) | 0.0348 (8) | |
C7 | 0.2701 (3) | −0.07795 (14) | 0.2027 (7) | 0.0336 (8) | |
C8 | 0.3593 (4) | −0.12011 (15) | 0.2688 (6) | 0.0413 (11) | |
H8 | 0.4494 | −0.1105 | 0.3136 | 0.050* | |
C9 | 0.3172 (4) | −0.17651 (15) | 0.2697 (7) | 0.0430 (11) | |
H9 | 0.3781 | −0.2043 | 0.3161 | 0.052* | |
C10 | 0.1848 (4) | −0.19110 (13) | 0.2015 (7) | 0.0356 (8) | |
C11 | 0.0954 (4) | −0.14989 (15) | 0.1288 (6) | 0.0380 (9) | |
H11 | 0.0071 | −0.1597 | 0.0786 | 0.046* | |
C12 | 0.1390 (4) | −0.09411 (16) | 0.1317 (7) | 0.0382 (9) | |
H12 | 0.0782 | −0.0665 | 0.0842 | 0.046* | |
C13 | 0.2110 (4) | −0.28780 (15) | 0.2954 (7) | 0.0487 (11) | |
H13A | 0.3060 | −0.2896 | 0.2449 | 0.073* | |
H13B | 0.1650 | −0.3239 | 0.2802 | 0.073* | |
H13C | 0.2157 | −0.2785 | 0.4259 | 0.073* | |
C14 | 0.2042 (3) | 0.13107 (13) | 0.2232 (7) | 0.0339 (8) | |
C15 | 0.2549 (4) | 0.17606 (15) | 0.3270 (7) | 0.0375 (9) | |
H15 | 0.3365 | 0.1721 | 0.4002 | 0.045* | |
C16 | 0.1822 (4) | 0.22714 (15) | 0.3202 (7) | 0.0448 (10) | |
H16 | 0.2173 | 0.2582 | 0.3860 | 0.054* | |
C17 | 0.0586 (4) | 0.23249 (15) | 0.2172 (8) | 0.0462 (9) | |
H17 | 0.0097 | 0.2668 | 0.2137 | 0.055* | |
C18 | 0.0080 (4) | 0.18610 (15) | 0.1186 (7) | 0.0456 (10) | |
H18 | −0.0765 | 0.1892 | 0.0511 | 0.055* | |
C19 | 0.0800 (4) | 0.13608 (15) | 0.1191 (7) | 0.0405 (9) | |
H19 | 0.0461 | 0.1055 | 0.0502 | 0.049* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0420 (14) | 0.0314 (12) | 0.057 (2) | −0.0069 (10) | −0.0019 (15) | 0.0016 (15) |
N1 | 0.0246 (14) | 0.0442 (16) | 0.048 (2) | 0.0005 (12) | −0.0045 (17) | 0.0019 (19) |
N2 | 0.0259 (15) | 0.062 (2) | 0.073 (3) | 0.0029 (14) | 0.003 (2) | 0.000 (3) |
N3 | 0.0294 (16) | 0.057 (2) | 0.085 (3) | 0.0061 (14) | 0.005 (2) | 0.000 (3) |
N4 | 0.0281 (15) | 0.0476 (19) | 0.071 (3) | 0.0056 (12) | 0.0001 (18) | −0.002 (2) |
N5 | 0.0326 (15) | 0.0351 (15) | 0.050 (2) | −0.0048 (12) | −0.0031 (17) | 0.0032 (18) |
N6 | 0.0292 (14) | 0.0285 (14) | 0.046 (2) | 0.0018 (10) | −0.0029 (17) | 0.0011 (16) |
C1 | 0.0353 (19) | 0.044 (2) | 0.051 (3) | −0.0068 (15) | −0.003 (2) | 0.002 (2) |
C2 | 0.0297 (16) | 0.0390 (18) | 0.042 (2) | 0.0006 (14) | 0.001 (2) | −0.001 (2) |
C3 | 0.0287 (16) | 0.0324 (16) | 0.0366 (19) | 0.0006 (13) | 0.001 (2) | −0.001 (2) |
C4 | 0.0301 (16) | 0.0333 (17) | 0.038 (2) | −0.0008 (13) | −0.0004 (18) | 0.0011 (19) |
C5 | 0.0277 (16) | 0.0322 (18) | 0.052 (2) | −0.0003 (13) | 0.000 (2) | −0.002 (2) |
C6 | 0.0284 (16) | 0.0319 (17) | 0.044 (2) | 0.0006 (13) | 0.000 (2) | 0.004 (2) |
C7 | 0.0290 (17) | 0.0308 (17) | 0.041 (2) | 0.0017 (13) | 0.0057 (18) | −0.0007 (18) |
C8 | 0.0305 (19) | 0.038 (2) | 0.055 (3) | −0.0003 (15) | −0.0042 (17) | −0.0009 (18) |
C9 | 0.034 (2) | 0.0303 (18) | 0.065 (3) | 0.0055 (15) | −0.0018 (19) | 0.0029 (18) |
C10 | 0.0358 (18) | 0.0299 (17) | 0.041 (2) | −0.0039 (13) | 0.0079 (19) | −0.0023 (18) |
C11 | 0.0292 (17) | 0.042 (2) | 0.042 (2) | −0.0046 (15) | −0.0006 (17) | 0.0028 (19) |
C12 | 0.0294 (18) | 0.0359 (19) | 0.049 (2) | 0.0050 (15) | 0.0026 (18) | 0.0034 (18) |
C13 | 0.059 (3) | 0.0315 (19) | 0.055 (3) | 0.0006 (18) | 0.003 (2) | 0.0022 (19) |
C14 | 0.0313 (17) | 0.0298 (16) | 0.041 (2) | 0.0008 (13) | 0.002 (2) | 0.0026 (19) |
C15 | 0.0334 (19) | 0.0349 (19) | 0.044 (2) | 0.0012 (15) | −0.0025 (17) | 0.0013 (18) |
C16 | 0.048 (2) | 0.035 (2) | 0.051 (3) | 0.0011 (17) | 0.002 (2) | −0.0088 (19) |
C17 | 0.047 (2) | 0.0377 (19) | 0.054 (3) | 0.0110 (15) | 0.003 (2) | 0.001 (2) |
C18 | 0.038 (2) | 0.043 (2) | 0.056 (3) | 0.0061 (16) | −0.010 (2) | 0.004 (2) |
C19 | 0.038 (2) | 0.0316 (18) | 0.052 (3) | −0.0037 (15) | −0.006 (2) | −0.0005 (18) |
O1—C10 | 1.375 (4) | C8—C9 | 1.388 (5) |
O1—C13 | 1.428 (5) | C8—H8 | 0.9300 |
N1—N2 | 1.367 (4) | C9—C10 | 1.374 (5) |
N1—C2 | 1.367 (4) | C9—H9 | 0.9300 |
N1—C1 | 1.370 (5) | C10—C11 | 1.384 (5) |
N2—N3 | 1.292 (5) | C11—C12 | 1.379 (5) |
N3—N4 | 1.355 (4) | C11—H11 | 0.9300 |
N4—C2 | 1.330 (4) | C12—H12 | 0.9300 |
N5—C1 | 1.294 (4) | C13—H13A | 0.9600 |
N5—C4 | 1.364 (4) | C13—H13B | 0.9600 |
N6—C4 | 1.368 (4) | C13—H13C | 0.9600 |
N6—C5 | 1.376 (4) | C14—C15 | 1.380 (5) |
N6—C14 | 1.435 (4) | C14—C19 | 1.385 (5) |
C1—H1 | 0.9300 | C15—C16 | 1.385 (5) |
C2—C3 | 1.420 (4) | C15—H15 | 0.9300 |
C3—C4 | 1.399 (5) | C16—C17 | 1.377 (6) |
C3—C6 | 1.426 (4) | C16—H16 | 0.9300 |
C5—C6 | 1.371 (4) | C17—C18 | 1.386 (6) |
C5—H5 | 0.9300 | C17—H17 | 0.9300 |
C6—C7 | 1.477 (4) | C18—C19 | 1.359 (5) |
C7—C12 | 1.380 (5) | C18—H18 | 0.9300 |
C7—C8 | 1.382 (5) | C19—H19 | 0.9300 |
C10—O1—C13 | 117.2 (3) | C10—C9—H9 | 120.2 |
N2—N1—C2 | 108.3 (3) | C8—C9—H9 | 120.2 |
N2—N1—C1 | 127.3 (3) | C9—C10—O1 | 124.5 (3) |
C2—N1—C1 | 124.4 (3) | C9—C10—C11 | 120.1 (3) |
N3—N2—N1 | 105.4 (3) | O1—C10—C11 | 115.4 (3) |
N2—N3—N4 | 112.9 (3) | C12—C11—C10 | 119.1 (3) |
C2—N4—N3 | 105.6 (3) | C12—C11—H11 | 120.4 |
C1—N5—C4 | 114.9 (3) | C10—C11—H11 | 120.4 |
C4—N6—C5 | 107.7 (3) | C11—C12—C7 | 122.1 (3) |
C4—N6—C14 | 128.4 (3) | C11—C12—H12 | 118.9 |
C5—N6—C14 | 123.8 (3) | C7—C12—H12 | 118.9 |
N5—C1—N1 | 122.0 (3) | O1—C13—H13A | 109.5 |
N5—C1—H1 | 119.0 | O1—C13—H13B | 109.5 |
N1—C1—H1 | 119.0 | H13A—C13—H13B | 109.5 |
N4—C2—N1 | 107.9 (3) | O1—C13—H13C | 109.5 |
N4—C2—C3 | 135.6 (3) | H13A—C13—H13C | 109.5 |
N1—C2—C3 | 116.5 (3) | H13B—C13—H13C | 109.5 |
C4—C3—C2 | 113.9 (3) | C15—C14—C19 | 120.8 (3) |
C4—C3—C6 | 108.2 (3) | C15—C14—N6 | 120.0 (3) |
C2—C3—C6 | 137.8 (3) | C19—C14—N6 | 119.2 (3) |
N5—C4—N6 | 123.7 (3) | C14—C15—C16 | 118.8 (4) |
N5—C4—C3 | 128.3 (3) | C14—C15—H15 | 120.6 |
N6—C4—C3 | 107.9 (3) | C16—C15—H15 | 120.6 |
C6—C5—N6 | 111.2 (3) | C17—C16—C15 | 120.7 (4) |
C6—C5—H5 | 124.4 | C17—C16—H16 | 119.6 |
N6—C5—H5 | 124.4 | C15—C16—H16 | 119.6 |
C5—C6—C3 | 104.9 (3) | C16—C17—C18 | 119.1 (3) |
C5—C6—C7 | 124.2 (3) | C16—C17—H17 | 120.4 |
C3—C6—C7 | 130.9 (3) | C18—C17—H17 | 120.4 |
C12—C7—C8 | 117.6 (3) | C19—C18—C17 | 121.1 (4) |
C12—C7—C6 | 120.0 (3) | C19—C18—H18 | 119.5 |
C8—C7—C6 | 122.4 (3) | C17—C18—H18 | 119.5 |
C7—C8—C9 | 121.4 (3) | C18—C19—C14 | 119.4 (4) |
C7—C8—H8 | 119.3 | C18—C19—H19 | 120.3 |
C9—C8—H8 | 119.3 | C14—C19—H19 | 120.3 |
C10—C9—C8 | 119.6 (3) | ||
C2—N1—N2—N3 | −0.4 (7) | C2—C3—C6—C5 | −177.7 (6) |
C1—N1—N2—N3 | 179.5 (5) | C4—C3—C6—C7 | −179.5 (5) |
N1—N2—N3—N4 | 0.5 (8) | C2—C3—C6—C7 | 3.6 (11) |
N2—N3—N4—C2 | −0.5 (7) | C5—C6—C7—C12 | 23.8 (8) |
C4—N5—C1—N1 | 0.3 (7) | C3—C6—C7—C12 | −157.7 (5) |
N2—N1—C1—N5 | 179.6 (5) | C5—C6—C7—C8 | −154.3 (5) |
C2—N1—C1—N5 | −0.5 (8) | C3—C6—C7—C8 | 24.2 (9) |
N3—N4—C2—N1 | 0.2 (6) | C12—C7—C8—C9 | −2.1 (7) |
N3—N4—C2—C3 | −179.7 (7) | C6—C7—C8—C9 | 176.0 (4) |
N2—N1—C2—N4 | 0.1 (6) | C7—C8—C9—C10 | 0.8 (7) |
C1—N1—C2—N4 | −179.8 (5) | C8—C9—C10—O1 | −178.6 (4) |
N2—N1—C2—C3 | −179.9 (5) | C8—C9—C10—C11 | 1.3 (7) |
C1—N1—C2—C3 | 0.2 (8) | C13—O1—C10—C9 | 8.3 (6) |
N4—C2—C3—C4 | −179.7 (6) | C13—O1—C10—C11 | −171.7 (4) |
N1—C2—C3—C4 | 0.3 (7) | C9—C10—C11—C12 | −2.1 (7) |
N4—C2—C3—C6 | −2.9 (12) | O1—C10—C11—C12 | 177.8 (4) |
N1—C2—C3—C6 | 177.1 (6) | C10—C11—C12—C7 | 0.8 (7) |
C1—N5—C4—N6 | −178.8 (5) | C8—C7—C12—C11 | 1.3 (7) |
C1—N5—C4—C3 | 0.2 (8) | C6—C7—C12—C11 | −176.9 (4) |
C5—N6—C4—N5 | 178.6 (5) | C4—N6—C14—C15 | −39.1 (7) |
C14—N6—C4—N5 | 2.3 (8) | C5—N6—C14—C15 | 145.1 (4) |
C5—N6—C4—C3 | −0.6 (5) | C4—N6—C14—C19 | 142.5 (5) |
C14—N6—C4—C3 | −176.9 (5) | C5—N6—C14—C19 | −33.3 (7) |
C2—C3—C4—N5 | −0.6 (8) | C19—C14—C15—C16 | −2.3 (6) |
C6—C3—C4—N5 | −178.3 (5) | N6—C14—C15—C16 | 179.3 (4) |
C2—C3—C4—N6 | 178.6 (4) | C14—C15—C16—C17 | 2.3 (7) |
C6—C3—C4—N6 | 0.9 (6) | C15—C16—C17—C18 | −0.5 (7) |
C4—N6—C5—C6 | 0.1 (5) | C16—C17—C18—C19 | −1.4 (7) |
C14—N6—C5—C6 | 176.6 (5) | C17—C18—C19—C14 | 1.4 (7) |
N6—C5—C6—C3 | 0.4 (6) | C15—C14—C19—C18 | 0.5 (7) |
N6—C5—C6—C7 | 179.2 (5) | N6—C14—C19—C18 | 178.8 (4) |
C4—C3—C6—C5 | −0.8 (6) |
Cg1 is the centroid of the C14–C19 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8···N4 | 0.93 | 2.50 | 3.257 (5) | 138 |
C15—H15···N5 | 0.93 | 2.57 | 3.020 (5) | 111 |
C11—H11···Cg1i | 0.93 | 2.91 | 3.684 (5) | 141 |
C13—H13c···Cg1ii | 0.96 | 2.72 | 3.459 (5) | 134 |
Symmetry codes: (i) −x, −y, z−1/2; (ii) −x+1/2, y−1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H14N6O |
Mr | 342.36 |
Crystal system, space group | Orthorhombic, Pna21 |
Temperature (K) | 293 |
a, b, c (Å) | 9.3537 (7), 23.6045 (19), 7.1543 (6) |
V (Å3) | 1579.6 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.35 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.967, 0.981 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16155, 1666, 1344 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.615 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.142, 1.12 |
No. of reflections | 1666 |
No. of parameters | 236 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.50, −0.27 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
Cg1 is the centroid of the C14–C19 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8···N4 | 0.93 | 2.50 | 3.257 (5) | 138 |
C15—H15···N5 | 0.93 | 2.57 | 3.020 (5) | 111 |
C11—H11···Cg1i | 0.93 | 2.91 | 3.684 (5) | 141 |
C13—H13c···Cg1ii | 0.96 | 2.72 | 3.459 (5) | 134 |
Symmetry codes: (i) −x, −y, z−1/2; (ii) −x+1/2, y−1/2, z+1/2. |
Footnotes
‡Additional correspondence author, e-mail: mmjotani@rediffmail.com.
Acknowledgements
The authors are thankful to the Department of Science and Technology (DST), and the SAIF, IIT Madras, Chennai, India, for the X-ray data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Interest in fused tetrazolopyrimidines relates, in part, to their biological activities (Shishoo & Jain, 1992; Desai & Shah, 2006). In continuation of complementary structural studies (Jotani et al. 2010a; Jotani et al. 2010b; Shah et al. 2010), the synthesis and X-ray crystal structure determination of the title compound, (I), are reported herein.
The molecule of (I) comprises a central pyrimidine ring (N1,N5,C1–C4) to which is fused a tetrazolo ring (N1–N4,C2) and a di-substituted pyrrole ring (N6,C3–C6), Fig. 1. These atoms form a plane with dihedral angles formed between the pyrimidine and the tetrazolo and pyrrole rings being 0.1 (3) and 1.5 (3) °, respectively; the dihedral angle formed between the tetrazolo and pyrrole rings is 1.6 (3) °. The r.m.s. deviation of the 12 non-hydrogen atoms comprising the fused ring system is 0.013 Å. The presence of intramolecular C–H···N interactions, Table 1, are noted and these result in the formation of S(6) and S(7) rings. The 4-methoxyphenyl and benzene substituents on the pyrrole ring are not co-planar with the fused-ring system as seen in the C3–C6–C7–C8 and C4–N6–C14–C15 torsion angles of 24.2 (9) and -39.1 (7) °, respectively.
In the crystal packing, the molecules pack into layers parallel to (0 1 0) with connections between the layers provided by C–H···π, Table 1, and π–π interactions between the five-membered tetrazolo and pyrrole rings [Cg(N1–N4,C2)···Cg(N6,C3–C6)i = 3.608 (3) Å, angle between planes = 5.0 (3) ° for i: 1-x, -y, -1/2+z], Fig. 2.
The Semi-empirical Quantum Chemical Calculations were performed on the experimental structure using the MOPAC2009 programme (Stewart, 2009) to optimize the structure with the Parametrization Model 6 (PM6) approximation together with the restricted Hartree-Fock closed-shell wavefunction; minimizations were terminated at an r.m.s. gradient of less than 0.01 kJ mol-1 Å-1. The most significant difference between the experimental and calculated structures is found in the relative orientation of the 4-methoxyphenyl ring with respect to the pyrrol ring to which it is bonded. This is quantified in the C3–C6–C7–C8 torsion angle of 38.9 ° cf. 24.2 (9) ° in the experimental structure. The orientation of the pyrrole-benzene ring remains unaffected.as seen in the (torsion angles is C4–N6–C14–C15 torsion angle of -38.8 ° cf. -39.1 (7) ° (experiment).