organic compounds
(E)-N′-(2,5-Dimethoxybenzylidene)-2,4-dihydroxybenzohydrazide
aCollege of Animal Science and Veterinary Medicine, Jilin University, Changchun 130062, People's Republic of China
*Correspondence e-mail: jlljx@163.com, jlliubo@yeah.net
In the title compound, C16H16N2O5, the dihedral angle between the two benzene rings is 4.2 (2)° and an intramolecular O—H⋯O hydrogen bond generates an S(6) ring. In the crystal, molecules are linked into layers lying parallel to the bc plane by O—H⋯O and N—H⋯O hydrogen bonds.
Related literature
For the biological properties of Schiff base compounds, see: Bhandari et al. (2008); Sinha et al. (2008). For Schiff base compounds containing 2,5-dimethoxybenzaldehyde, see: Wang et al. (2009). For reference structural data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Siemens, 1996); cell SAINT (Siemens, 1996); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053681001130X/hb5375sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681001130X/hb5375Isup2.hkl
2,5-dimethoxybenzaldehyde (0.1 mmol, 16.6 mg) and 2,4-dihydroxybenzohydrazide (0.1 mmol, 16.8 mg) were dissolved in a 95% ethanol solution (10 ml). The mixture was stirred at room temperature to give a clear colorless solution. Light yellow blocks of (I) were formed by gradual evaporation of the solvent over a period of three days at room temperature.
All H atoms were placed in geometrically idealized positions, with C—H = 0.93–0.96 Å, O—H = 0.82–0.85 Å and N—H = 0.86 Å. Uiso(H) = 1.2Ueq(C,N), and 1.5Ueq(O).
Data collection: SMART (Siemens, 1996); cell
SAINT (Siemens, 1996); data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C16H16N2O5 | F(000) = 664 |
Mr = 316.31 | Dx = 1.421 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1224 reflections |
a = 7.8600 (16) Å | θ = 2.7–22.4° |
b = 15.358 (3) Å | µ = 0.11 mm−1 |
c = 12.425 (3) Å | T = 295 K |
β = 99.80 (3)° | Block, light yellow |
V = 1478.0 (5) Å3 | 0.18 × 0.17 × 0.15 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 2626 independent reflections |
Radiation source: fine-focus sealed tube | 1698 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
ϕ and ω scans | θmax = 25.1°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→8 |
Tmin = 0.981, Tmax = 0.984 | k = −17→18 |
7757 measured reflections | l = −13→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0464P)2 + 0.2321P] where P = (Fo2 + 2Fc2)/3 |
2626 reflections | (Δ/σ)max < 0.001 |
212 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C16H16N2O5 | V = 1478.0 (5) Å3 |
Mr = 316.31 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.8600 (16) Å | µ = 0.11 mm−1 |
b = 15.358 (3) Å | T = 295 K |
c = 12.425 (3) Å | 0.18 × 0.17 × 0.15 mm |
β = 99.80 (3)° |
Bruker SMART CCD diffractometer | 2626 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1698 reflections with I > 2σ(I) |
Tmin = 0.981, Tmax = 0.984 | Rint = 0.039 |
7757 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.15 e Å−3 |
2626 reflections | Δρmin = −0.20 e Å−3 |
212 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.5668 (2) | 0.18995 (10) | 0.34476 (11) | 0.0523 (5) | |
H1 | 0.6007 | 0.2404 | 0.3438 | 0.078* | |
O2 | 0.2931 (2) | −0.02763 (10) | 0.10807 (13) | 0.0623 (5) | |
H2 | 0.3162 | −0.0573 | 0.1635 | 0.093* | |
O3 | 0.6343 (2) | 0.33256 (9) | 0.26549 (11) | 0.0477 (4) | |
O4 | 0.7730 (2) | 0.58885 (10) | −0.13674 (12) | 0.0569 (5) | |
O5 | 1.0792 (2) | 0.67891 (10) | 0.28127 (12) | 0.0529 (4) | |
N1 | 0.6247 (2) | 0.35121 (10) | 0.08522 (13) | 0.0390 (5) | |
H1A | 0.5957 | 0.3331 | 0.0192 | 0.047* | |
N2 | 0.7069 (2) | 0.42982 (11) | 0.10809 (13) | 0.0390 (5) | |
C1 | 0.5091 (3) | 0.21858 (13) | 0.15178 (15) | 0.0329 (5) | |
C2 | 0.5058 (3) | 0.16342 (13) | 0.24143 (16) | 0.0354 (5) | |
C3 | 0.4396 (3) | 0.08035 (14) | 0.22852 (16) | 0.0391 (5) | |
H3 | 0.4436 | 0.0439 | 0.2887 | 0.047* | |
C4 | 0.3674 (3) | 0.05154 (14) | 0.12604 (17) | 0.0421 (6) | |
C5 | 0.3657 (3) | 0.10522 (15) | 0.03614 (17) | 0.0527 (7) | |
H5 | 0.3168 | 0.0857 | −0.0331 | 0.063* | |
C6 | 0.4356 (3) | 0.18663 (14) | 0.04918 (16) | 0.0451 (6) | |
H6 | 0.4342 | 0.2218 | −0.0119 | 0.054* | |
C7 | 0.5915 (3) | 0.30376 (13) | 0.17057 (16) | 0.0368 (5) | |
C8 | 0.7456 (3) | 0.47279 (13) | 0.02779 (17) | 0.0386 (5) | |
H8 | 0.7160 | 0.4520 | −0.0432 | 0.046* | |
C9 | 0.8368 (3) | 0.55503 (13) | 0.04948 (16) | 0.0365 (5) | |
C10 | 0.8507 (3) | 0.61312 (14) | −0.03424 (16) | 0.0405 (5) | |
C11 | 0.9361 (3) | 0.69144 (14) | −0.01112 (19) | 0.0463 (6) | |
H11 | 0.9448 | 0.7304 | −0.0672 | 0.056* | |
C12 | 1.0081 (3) | 0.71168 (15) | 0.09455 (18) | 0.0468 (6) | |
H12 | 1.0627 | 0.7651 | 0.1097 | 0.056* | |
C13 | 1.0003 (3) | 0.65342 (14) | 0.17882 (17) | 0.0405 (5) | |
C14 | 0.9151 (3) | 0.57596 (14) | 0.15574 (17) | 0.0380 (5) | |
H14 | 0.9094 | 0.5366 | 0.2119 | 0.046* | |
C15 | 1.1064 (3) | 0.61377 (16) | 0.36363 (18) | 0.0576 (7) | |
H15A | 0.9970 | 0.5938 | 0.3785 | 0.086* | |
H15B | 1.1726 | 0.6377 | 0.4290 | 0.086* | |
H15C | 1.1680 | 0.5658 | 0.3390 | 0.086* | |
C16 | 0.8212 (4) | 0.63418 (17) | −0.22690 (18) | 0.0649 (8) | |
H16A | 0.7839 | 0.6936 | −0.2260 | 0.097* | |
H16B | 0.7679 | 0.6070 | −0.2938 | 0.097* | |
H16C | 0.9445 | 0.6324 | −0.2216 | 0.097* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0799 (12) | 0.0477 (11) | 0.0280 (8) | −0.0122 (9) | 0.0054 (8) | 0.0022 (7) |
O2 | 0.0909 (13) | 0.0381 (10) | 0.0523 (10) | −0.0194 (9) | −0.0042 (10) | 0.0057 (8) |
O3 | 0.0727 (11) | 0.0384 (9) | 0.0312 (8) | −0.0072 (8) | 0.0064 (7) | −0.0044 (7) |
O4 | 0.0792 (12) | 0.0540 (11) | 0.0359 (9) | −0.0129 (9) | 0.0045 (8) | 0.0054 (7) |
O5 | 0.0636 (11) | 0.0464 (10) | 0.0445 (9) | −0.0064 (8) | −0.0026 (8) | −0.0036 (8) |
N1 | 0.0569 (12) | 0.0289 (10) | 0.0321 (10) | −0.0078 (9) | 0.0098 (8) | −0.0038 (8) |
N2 | 0.0502 (11) | 0.0294 (10) | 0.0384 (10) | −0.0049 (8) | 0.0101 (9) | −0.0028 (8) |
C1 | 0.0414 (12) | 0.0287 (12) | 0.0293 (11) | 0.0003 (9) | 0.0075 (9) | 0.0018 (9) |
C2 | 0.0394 (12) | 0.0395 (13) | 0.0283 (11) | 0.0013 (10) | 0.0082 (9) | 0.0015 (10) |
C3 | 0.0469 (13) | 0.0365 (13) | 0.0343 (12) | −0.0012 (10) | 0.0078 (10) | 0.0097 (10) |
C4 | 0.0487 (14) | 0.0327 (13) | 0.0440 (13) | −0.0046 (10) | 0.0058 (11) | 0.0039 (10) |
C5 | 0.0797 (18) | 0.0412 (14) | 0.0332 (13) | −0.0130 (13) | −0.0014 (12) | 0.0002 (11) |
C6 | 0.0657 (16) | 0.0386 (13) | 0.0300 (12) | −0.0073 (11) | 0.0052 (11) | 0.0064 (10) |
C7 | 0.0451 (13) | 0.0342 (12) | 0.0315 (12) | 0.0049 (10) | 0.0080 (10) | 0.0016 (10) |
C8 | 0.0487 (14) | 0.0341 (13) | 0.0333 (12) | −0.0013 (10) | 0.0076 (10) | −0.0035 (10) |
C9 | 0.0415 (13) | 0.0312 (12) | 0.0378 (12) | 0.0006 (10) | 0.0095 (10) | 0.0001 (10) |
C10 | 0.0467 (14) | 0.0383 (13) | 0.0365 (12) | 0.0003 (10) | 0.0071 (11) | 0.0011 (10) |
C11 | 0.0558 (15) | 0.0357 (13) | 0.0478 (14) | −0.0033 (11) | 0.0099 (12) | 0.0075 (10) |
C12 | 0.0521 (15) | 0.0331 (13) | 0.0550 (15) | −0.0036 (10) | 0.0090 (12) | 0.0000 (11) |
C13 | 0.0420 (13) | 0.0370 (13) | 0.0421 (13) | −0.0014 (10) | 0.0061 (10) | −0.0039 (10) |
C14 | 0.0429 (13) | 0.0329 (12) | 0.0393 (12) | 0.0012 (10) | 0.0098 (10) | 0.0036 (9) |
C15 | 0.0654 (17) | 0.0599 (17) | 0.0439 (14) | −0.0057 (13) | −0.0006 (13) | 0.0041 (12) |
C16 | 0.089 (2) | 0.0674 (19) | 0.0395 (14) | 0.0021 (16) | 0.0143 (14) | 0.0098 (13) |
O1—C2 | 1.355 (2) | C5—C6 | 1.364 (3) |
O1—H1 | 0.8200 | C5—H5 | 0.9300 |
O2—C4 | 1.351 (2) | C6—H6 | 0.9300 |
O2—H2 | 0.8200 | C8—C9 | 1.455 (3) |
O3—C7 | 1.251 (2) | C8—H8 | 0.9300 |
O4—C10 | 1.367 (2) | C9—C10 | 1.389 (3) |
O4—C16 | 1.424 (3) | C9—C14 | 1.396 (3) |
O5—C13 | 1.375 (2) | C10—C11 | 1.384 (3) |
O5—C15 | 1.421 (3) | C11—C12 | 1.374 (3) |
N1—C7 | 1.348 (2) | C11—H11 | 0.9300 |
N1—N2 | 1.376 (2) | C12—C13 | 1.387 (3) |
N1—H1A | 0.8600 | C12—H12 | 0.9300 |
N2—C8 | 1.275 (2) | C13—C14 | 1.371 (3) |
C1—C6 | 1.396 (3) | C14—H14 | 0.9300 |
C1—C2 | 1.403 (3) | C15—H15A | 0.9600 |
C1—C7 | 1.461 (3) | C15—H15B | 0.9600 |
C2—C3 | 1.377 (3) | C15—H15C | 0.9600 |
C3—C4 | 1.376 (3) | C16—H16A | 0.9600 |
C3—H3 | 0.9300 | C16—H16B | 0.9600 |
C4—C5 | 1.387 (3) | C16—H16C | 0.9600 |
C2—O1—H1 | 109.5 | C9—C8—H8 | 120.7 |
C4—O2—H2 | 109.5 | C10—C9—C14 | 118.8 (2) |
C10—O4—C16 | 117.56 (18) | C10—C9—C8 | 121.21 (19) |
C13—O5—C15 | 117.08 (17) | C14—C9—C8 | 119.95 (19) |
C7—N1—N2 | 117.31 (17) | O4—C10—C11 | 123.68 (19) |
C7—N1—H1A | 121.3 | O4—C10—C9 | 116.29 (19) |
N2—N1—H1A | 121.3 | C11—C10—C9 | 120.0 (2) |
C8—N2—N1 | 117.29 (17) | C12—C11—C10 | 120.1 (2) |
C6—C1—C2 | 116.88 (19) | C12—C11—H11 | 119.9 |
C6—C1—C7 | 124.33 (18) | C10—C11—H11 | 119.9 |
C2—C1—C7 | 118.77 (18) | C11—C12—C13 | 120.8 (2) |
O1—C2—C3 | 117.07 (18) | C11—C12—H12 | 119.6 |
O1—C2—C1 | 121.30 (19) | C13—C12—H12 | 119.6 |
C3—C2—C1 | 121.64 (19) | C14—C13—O5 | 124.6 (2) |
C4—C3—C2 | 119.61 (19) | C14—C13—C12 | 119.0 (2) |
C4—C3—H3 | 120.2 | O5—C13—C12 | 116.4 (2) |
C2—C3—H3 | 120.2 | C13—C14—C9 | 121.2 (2) |
O2—C4—C3 | 122.76 (19) | C13—C14—H14 | 119.4 |
O2—C4—C5 | 117.22 (19) | C9—C14—H14 | 119.4 |
C3—C4—C5 | 120.0 (2) | O5—C15—H15A | 109.5 |
C6—C5—C4 | 120.1 (2) | O5—C15—H15B | 109.5 |
C6—C5—H5 | 120.0 | H15A—C15—H15B | 109.5 |
C4—C5—H5 | 120.0 | O5—C15—H15C | 109.5 |
C5—C6—C1 | 121.75 (19) | H15A—C15—H15C | 109.5 |
C5—C6—H6 | 119.1 | H15B—C15—H15C | 109.5 |
C1—C6—H6 | 119.1 | O4—C16—H16A | 109.5 |
O3—C7—N1 | 119.56 (19) | O4—C16—H16B | 109.5 |
O3—C7—C1 | 120.54 (18) | H16A—C16—H16B | 109.5 |
N1—C7—C1 | 119.89 (18) | O4—C16—H16C | 109.5 |
N2—C8—C9 | 118.67 (19) | H16A—C16—H16C | 109.5 |
N2—C8—H8 | 120.7 | H16B—C16—H16C | 109.5 |
C7—N1—N2—C8 | 176.80 (19) | N1—N2—C8—C9 | −178.34 (17) |
C6—C1—C2—O1 | −176.99 (19) | N2—C8—C9—C10 | −166.4 (2) |
C7—C1—C2—O1 | 4.5 (3) | N2—C8—C9—C14 | 14.8 (3) |
C6—C1—C2—C3 | 2.6 (3) | C16—O4—C10—C11 | 17.6 (3) |
C7—C1—C2—C3 | −175.98 (19) | C16—O4—C10—C9 | −163.9 (2) |
O1—C2—C3—C4 | 176.54 (19) | C14—C9—C10—O4 | 179.36 (18) |
C1—C2—C3—C4 | −3.0 (3) | C8—C9—C10—O4 | 0.6 (3) |
C2—C3—C4—O2 | −176.9 (2) | C14—C9—C10—C11 | −2.1 (3) |
C2—C3—C4—C5 | 1.7 (3) | C8—C9—C10—C11 | 179.09 (19) |
O2—C4—C5—C6 | 178.7 (2) | O4—C10—C11—C12 | 178.8 (2) |
C3—C4—C5—C6 | 0.0 (4) | C9—C10—C11—C12 | 0.4 (3) |
C4—C5—C6—C1 | −0.4 (4) | C10—C11—C12—C13 | 1.7 (3) |
C2—C1—C6—C5 | −0.8 (3) | C15—O5—C13—C14 | 14.2 (3) |
C7—C1—C6—C5 | 177.6 (2) | C15—O5—C13—C12 | −166.4 (2) |
N2—N1—C7—O3 | 0.6 (3) | C11—C12—C13—C14 | −1.9 (3) |
N2—N1—C7—C1 | −178.22 (17) | C11—C12—C13—O5 | 178.70 (19) |
C6—C1—C7—O3 | 170.6 (2) | O5—C13—C14—C9 | 179.43 (19) |
C2—C1—C7—O3 | −11.0 (3) | C12—C13—C14—C9 | 0.0 (3) |
C6—C1—C7—N1 | −10.6 (3) | C10—C9—C14—C13 | 1.9 (3) |
C2—C1—C7—N1 | 167.86 (19) | C8—C9—C14—C13 | −179.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O3 | 0.82 | 1.76 | 2.495 (2) | 148 |
O2—H2···O3i | 0.82 | 1.92 | 2.664 (2) | 151 |
N1—H1A···O1ii | 0.86 | 2.17 | 3.012 (2) | 166 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C16H16N2O5 |
Mr | 316.31 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 7.8600 (16), 15.358 (3), 12.425 (3) |
β (°) | 99.80 (3) |
V (Å3) | 1478.0 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.18 × 0.17 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.981, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7757, 2626, 1698 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.112, 1.02 |
No. of reflections | 2626 |
No. of parameters | 212 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.20 |
Computer programs: SMART (Siemens, 1996), SAINT (Siemens, 1996), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O3 | 0.82 | 1.76 | 2.495 (2) | 148 |
O2—H2···O3i | 0.82 | 1.92 | 2.664 (2) | 151 |
N1—H1A···O1ii | 0.86 | 2.17 | 3.012 (2) | 166 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x, −y+1/2, z−1/2. |
References
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Sinha, D., Tiwari, A. K., Singh, S., Shukla, G., Mishra, P., Chandra, H. & Mishra, A. K. (2008). Eur. J. Med. Chem. 43, 160–165. Web of Science CrossRef PubMed CAS Google Scholar
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Schiff base compounds have been of great interest for many years. Some of the complexes derived from Schiff bases have been found to have pharmacological and antitumor properties (Bhandari et al., 2008; Sinha et al., 2008). In this paper, the crystal structure of the title compound, (I), a new Schiff base compound derived from the condensation reaction of 2,4-dihydroxybenzohydrazide with 2,5-dimethoxybenzaldehyde is reported.
The Schiff base molecule of the compound displays a trans configuration with respect to the C=N and C—N bonds(Fig. 1). All the bond lengths are within their normal ranges (Allen et al., 1987) and comparable to other Schiff base compounds containing 2,5-dimethoxybenzaldehyde (Wang et al., 2009). The dihedral angle between the two benzene rings is 4.2 (2)°. Intramolecular O—H···O hydrogen bonds are observed(Table 1). Molecules are linked into layers parallel to the bc plane by O—H···O and N—H···O hydrogen bonds(Fig. 2).