metal-organic compounds
catena-Poly[[(2-methylbenzoato-κ2O,O′)sodium]-di-μ-aqua-κ4O:O′]
aDepartment of Chemistry, University of Sargodha, Sargodha 40100, Pakistan, and bInstitute of Nuclear Chemistry and Technology, ul. Dorodna 16, 03-195 Warszawa, Poland
*Correspondence e-mail: drdanish62@gmail.com
In the title coordination polymer, [Na(C8H7O2)(H2O)2]n, the cation is chelated by the carboxylate O atoms of the anion in a bidentate mode and is surrounded by the O atoms of four water molecules. The coordination of the Na+ cation is distorted octahedral. The water molecules bridge adjacent metal cations, forming polymeric layers parallel to (100). The structure is stabilized by an extensive network of O—H⋯O hydrogen bonds.
Related literature
Tin complexes with organic ligands have been studied intensively due to their biological activity, see, for example: Shahzadi et al. (2007). For 2-methylbenzoic and 4-methylbenzoic acids as potent allergic sensitizers when applied to human skin, see: Emmet & Suskind (1973), and as inhibitors of lettuce fruit germination, see: Reynolds (1978). Sodium 2-methylbenzoate has been studied as a precursor in the synthesis of biologically active tin(IV) complexes. For the structure of a sodium complex with a 2-methyl-3,5-dinitrobenzoate ligand, see: Danish et al. (2010).
Experimental
Crystal data
|
Data collection
Refinement
|
|
Data collection: KM-4 Software (Kuma, 1996); cell KM-4 Software; data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536810010536/wm2315sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810010536/wm2315Isup2.hkl
50 ml of an aqueous solution containing 0.0147 mmol of 2-methylbenzoic acid were added dropwise with continuous stirring at room trmperature to 50 ml of an aqueous solution of sodium bicarbonate (0.0147 mmol). The mixture was then refluxed for 3 hours, cooled to room temperature and concentrated under reduced pressure to afford a dry solid mass which was then purified by re-crystallization from a distilled water-ethanol (4:1) mixture to obtain single crystals.
Water H atoms were localized from Fourier maps and refined isotropically without constraints. H atoms attached to toluene-ring C atoms were positioned geometrically and refined with a riding model.
Data collection: KM-4 Software (Kuma, 1996); cell
KM-4 Software (Kuma, 1996); data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Na(C8H7O2)(H2O)2] | F(000) = 408 |
Mr = 194.16 | Dx = 1.332 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 16.145 (3) Å | θ = 6–15° |
b = 8.1155 (16) Å | µ = 0.14 mm−1 |
c = 7.3986 (15) Å | T = 293 K |
β = 92.98 (3)° | Block, colourless |
V = 968.1 (3) Å3 | 0.55 × 0.41 × 0.11 mm |
Z = 4 |
Kuma KM-4 four-circle diffractometer | 1919 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.024 |
Graphite monochromator | θmax = 30.1°, θmin = 1.3° |
profile data from ω/2θ scans | h = −22→22 |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008) | k = 0→11 |
Tmin = 0.952, Tmax = 0.991 | l = −10→0 |
3057 measured reflections | 3 standard reflections every 200 reflections |
2845 independent reflections | intensity decay: 0.8% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.141 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0889P)2 + 0.1369P] where P = (Fo2 + 2Fc2)/3 |
2845 reflections | (Δ/σ)max < 0.001 |
151 parameters | Δρmax = 0.44 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
[Na(C8H7O2)(H2O)2] | V = 968.1 (3) Å3 |
Mr = 194.16 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.145 (3) Å | µ = 0.14 mm−1 |
b = 8.1155 (16) Å | T = 293 K |
c = 7.3986 (15) Å | 0.55 × 0.41 × 0.11 mm |
β = 92.98 (3)° |
Kuma KM-4 four-circle diffractometer | 1919 reflections with I > 2σ(I) |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008) | Rint = 0.024 |
Tmin = 0.952, Tmax = 0.991 | 3 standard reflections every 200 reflections |
3057 measured reflections | intensity decay: 0.8% |
2845 independent reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.141 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.44 e Å−3 |
2845 reflections | Δρmin = −0.21 e Å−3 |
151 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Na1 | 0.01791 (3) | 0.64831 (7) | 0.25611 (7) | 0.03320 (17) | |
O2 | 0.14852 (7) | 0.53347 (14) | 0.41532 (13) | 0.0386 (2) | |
C7 | 0.18004 (8) | 0.53264 (15) | 0.26404 (16) | 0.0273 (2) | |
C1 | 0.27247 (8) | 0.53757 (16) | 0.25234 (17) | 0.0305 (3) | |
C2 | 0.32656 (10) | 0.4527 (2) | 0.3718 (2) | 0.0425 (3) | |
C6 | 0.30354 (11) | 0.6271 (3) | 0.1107 (2) | 0.0492 (4) | |
C3 | 0.41092 (11) | 0.4583 (3) | 0.3414 (3) | 0.0562 (5) | |
C8 | 0.29779 (16) | 0.3518 (4) | 0.5275 (4) | 0.0852 (9) | |
H8A | 0.2774 | 0.4239 | 0.6181 | 0.128* | |
H8B | 0.3434 | 0.2884 | 0.5788 | 0.128* | |
H8C | 0.2542 | 0.2789 | 0.4848 | 0.128* | |
C5 | 0.38805 (13) | 0.6352 (3) | 0.0885 (4) | 0.0694 (6) | |
C4 | 0.44096 (12) | 0.5494 (3) | 0.2038 (4) | 0.0672 (6) | |
O1 | 0.13648 (6) | 0.53062 (13) | 0.11780 (13) | 0.0367 (2) | |
O3 | 0.08470 (7) | 0.91596 (13) | 0.25956 (15) | 0.0365 (2) | |
O4 | −0.05771 (7) | 0.74541 (15) | 0.49901 (14) | 0.0357 (2) | |
H32 | 0.1128 (15) | 0.918 (3) | 0.179 (4) | 0.055 (6)* | |
H31 | 0.1175 (16) | 0.921 (3) | 0.357 (4) | 0.069 (7)* | |
H41 | −0.0863 (15) | 0.676 (3) | 0.526 (3) | 0.057 (7)* | |
H42 | −0.0901 (14) | 0.819 (3) | 0.458 (3) | 0.056 (6)* | |
H5 | 0.2640 (13) | 0.693 (3) | 0.026 (3) | 0.056 (6)* | |
H2 | 0.4464 (15) | 0.395 (3) | 0.412 (3) | 0.060 (6)* | |
H4 | 0.4058 (17) | 0.705 (4) | −0.018 (4) | 0.092 (9)* | |
H3 | 0.495 (2) | 0.556 (4) | 0.179 (4) | 0.096 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Na1 | 0.0366 (3) | 0.0334 (3) | 0.0296 (3) | 0.0032 (2) | 0.0015 (2) | 0.0004 (2) |
O2 | 0.0421 (5) | 0.0471 (6) | 0.0270 (4) | −0.0009 (4) | 0.0063 (4) | 0.0023 (4) |
C7 | 0.0323 (6) | 0.0244 (5) | 0.0251 (5) | −0.0006 (4) | 0.0012 (4) | 0.0000 (4) |
C1 | 0.0319 (6) | 0.0309 (6) | 0.0286 (6) | −0.0002 (5) | 0.0002 (5) | −0.0024 (5) |
C2 | 0.0395 (7) | 0.0431 (8) | 0.0439 (8) | 0.0023 (6) | −0.0073 (6) | 0.0027 (6) |
C6 | 0.0441 (8) | 0.0588 (10) | 0.0452 (9) | −0.0034 (7) | 0.0089 (7) | 0.0115 (7) |
C3 | 0.0379 (8) | 0.0628 (12) | 0.0664 (12) | 0.0075 (7) | −0.0114 (8) | −0.0096 (9) |
C8 | 0.0650 (13) | 0.106 (2) | 0.0834 (16) | 0.0098 (13) | −0.0112 (12) | 0.0597 (15) |
C5 | 0.0497 (11) | 0.0876 (16) | 0.0730 (14) | −0.0130 (10) | 0.0234 (10) | 0.0141 (12) |
C4 | 0.0341 (8) | 0.0854 (16) | 0.0830 (15) | −0.0045 (9) | 0.0118 (9) | −0.0171 (12) |
O1 | 0.0374 (5) | 0.0440 (6) | 0.0279 (5) | 0.0005 (4) | −0.0045 (4) | −0.0024 (4) |
O3 | 0.0474 (6) | 0.0369 (5) | 0.0253 (5) | −0.0008 (4) | 0.0018 (4) | 0.0001 (4) |
O4 | 0.0415 (5) | 0.0336 (5) | 0.0320 (5) | −0.0002 (5) | 0.0009 (4) | −0.0016 (4) |
Na1—O4 | 2.3599 (13) | C2—C8 | 1.506 (3) |
Na1—O4i | 2.3689 (13) | C6—C5 | 1.384 (3) |
Na1—O1 | 2.4141 (13) | C6—H5 | 1.02 (2) |
Na1—O3 | 2.4245 (13) | C3—C4 | 1.367 (4) |
Na1—O3ii | 2.5086 (13) | C3—H2 | 0.91 (3) |
Na1—O2 | 2.5387 (14) | C8—H8A | 0.9600 |
Na1—C7 | 2.7787 (14) | C8—H8B | 0.9600 |
Na1—Na1i | 4.0508 (8) | C8—H8C | 0.9600 |
Na1—Na1iii | 4.0508 (8) | C5—C4 | 1.366 (4) |
Na1—Na1ii | 4.0990 (8) | C5—H4 | 1.02 (3) |
Na1—Na1iv | 4.0991 (8) | C4—H3 | 0.90 (3) |
O2—C7 | 1.2534 (16) | O3—Na1iv | 2.5087 (13) |
C7—O1 | 1.2596 (16) | O3—H32 | 0.77 (3) |
C7—C1 | 1.4999 (18) | O3—H31 | 0.88 (3) |
C1—C6 | 1.390 (2) | O4—Na1iii | 2.3689 (13) |
C1—C2 | 1.392 (2) | O4—H41 | 0.76 (3) |
C2—C3 | 1.393 (3) | O4—H42 | 0.84 (3) |
O4—Na1—O4i | 102.97 (4) | O2—Na1—Na1iv | 119.11 (3) |
O4—Na1—O1 | 155.22 (5) | C7—Na1—Na1iv | 117.81 (3) |
O4i—Na1—O1 | 100.99 (4) | Na1i—Na1—Na1iv | 65.37 (2) |
O4—Na1—O3 | 86.57 (5) | Na1iii—Na1—Na1iv | 67.05 (2) |
O4i—Na1—O3 | 83.84 (5) | Na1ii—Na1—Na1iv | 163.72 (3) |
O1—Na1—O3 | 89.82 (4) | C7—O2—Na1 | 87.34 (8) |
O4—Na1—O3ii | 85.39 (5) | O2—C7—O1 | 122.18 (12) |
O4i—Na1—O3ii | 85.70 (5) | O2—C7—C1 | 120.18 (11) |
O1—Na1—O3ii | 102.67 (4) | O1—C7—C1 | 117.62 (12) |
O3—Na1—O3ii | 165.05 (4) | O2—C7—Na1 | 65.88 (8) |
O4—Na1—O2 | 102.67 (5) | O1—C7—Na1 | 60.19 (7) |
O4i—Na1—O2 | 152.54 (4) | C1—C7—Na1 | 158.26 (9) |
O1—Na1—O2 | 52.67 (4) | C6—C1—C2 | 119.88 (15) |
O3—Na1—O2 | 88.04 (4) | C6—C1—C7 | 117.16 (13) |
O3ii—Na1—O2 | 106.03 (4) | C2—C1—C7 | 122.92 (13) |
O4—Na1—C7 | 128.38 (5) | C1—C2—C3 | 117.90 (16) |
O4i—Na1—C7 | 125.85 (5) | C1—C2—C8 | 123.11 (16) |
O1—Na1—C7 | 26.92 (4) | C3—C2—C8 | 118.97 (17) |
O3—Na1—C7 | 83.36 (4) | C5—C6—C1 | 120.70 (18) |
O3ii—Na1—C7 | 111.48 (4) | C5—C6—H5 | 119.4 (12) |
O2—Na1—C7 | 26.78 (3) | C1—C6—H5 | 119.8 (12) |
O4—Na1—Na1i | 125.73 (4) | C4—C3—C2 | 121.71 (18) |
O4i—Na1—Na1i | 30.99 (3) | C4—C3—H2 | 119.7 (15) |
O1—Na1—Na1i | 74.72 (3) | C2—C3—H2 | 118.5 (15) |
O3—Na1—Na1i | 67.88 (3) | C2—C8—H8A | 109.5 |
O3ii—Na1—Na1i | 107.18 (3) | C2—C8—H8B | 109.5 |
O2—Na1—Na1i | 122.27 (3) | H8A—C8—H8B | 109.5 |
C7—Na1—Na1i | 96.45 (4) | C2—C8—H8C | 109.5 |
O4—Na1—Na1iii | 31.13 (3) | H8A—C8—H8C | 109.5 |
O4i—Na1—Na1iii | 124.09 (4) | H8B—C8—H8C | 109.5 |
O1—Na1—Na1iii | 125.87 (3) | C4—C5—C6 | 119.3 (2) |
O3—Na1—Na1iii | 69.30 (4) | C4—C5—H4 | 124.9 (16) |
O3ii—Na1—Na1iii | 108.49 (3) | C6—C5—H4 | 115.8 (16) |
O2—Na1—Na1iii | 76.42 (3) | C5—C4—C3 | 120.39 (17) |
C7—Na1—Na1iii | 99.38 (4) | C5—C4—H3 | 115 (2) |
Na1i—Na1—Na1iii | 131.91 (3) | C3—C4—H3 | 125 (2) |
O4—Na1—Na1ii | 105.63 (4) | C7—O1—Na1 | 92.89 (8) |
O4i—Na1—Na1ii | 106.05 (4) | Na1—O3—Na1iv | 112.37 (5) |
O1—Na1—Na1ii | 73.32 (3) | Na1—O3—H32 | 107.0 (18) |
O3—Na1—Na1ii | 161.66 (4) | Na1iv—O3—H32 | 111.3 (18) |
O3ii—Na1—Na1ii | 33.16 (3) | Na1—O3—H31 | 107.4 (17) |
O2—Na1—Na1ii | 76.09 (3) | Na1iv—O3—H31 | 111.9 (17) |
C7—Na1—Na1ii | 78.33 (3) | H32—O3—H31 | 106 (2) |
Na1i—Na1—Na1ii | 112.95 (2) | Na1—O4—Na1iii | 117.88 (5) |
Na1iii—Na1—Na1ii | 114.63 (2) | Na1—O4—H41 | 107.1 (18) |
O4—Na1—Na1iv | 66.94 (3) | Na1iii—O4—H41 | 110.8 (17) |
O4i—Na1—Na1iv | 63.62 (3) | Na1—O4—H42 | 107.3 (15) |
O1—Na1—Na1iv | 119.76 (4) | Na1iii—O4—H42 | 108.5 (16) |
O3—Na1—Na1iv | 34.47 (3) | H41—O4—H42 | 104 (2) |
O3ii—Na1—Na1iv | 130.62 (4) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x, y−1/2, −z+1/2; (iii) x, −y+3/2, z+1/2; (iv) −x, y+1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H42···O1iv | 0.84 (3) | 1.94 (3) | 2.7582 (17) | 163 (2) |
O4—H41···O2v | 0.76 (3) | 2.03 (3) | 2.7874 (17) | 171 (2) |
O3—H31···O1iii | 0.88 (3) | 1.97 (3) | 2.7716 (16) | 151 (2) |
O3—H32···O2i | 0.77 (3) | 2.10 (3) | 2.8265 (16) | 158 (2) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (iii) x, −y+3/2, z+1/2; (iv) −x, y+1/2, −z+1/2; (v) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Na(C8H7O2)(H2O)2] |
Mr | 194.16 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 16.145 (3), 8.1155 (16), 7.3986 (15) |
β (°) | 92.98 (3) |
V (Å3) | 968.1 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.55 × 0.41 × 0.11 |
Data collection | |
Diffractometer | Kuma KM-4 four-circle diffractometer |
Absorption correction | Analytical (CrysAlis RED; Oxford Diffraction, 2008) |
Tmin, Tmax | 0.952, 0.991 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3057, 2845, 1919 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.141, 1.02 |
No. of reflections | 2845 |
No. of parameters | 151 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.44, −0.21 |
Computer programs: KM-4 Software (Kuma, 1996), DATAPROC (Kuma, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Na1—O4 | 2.3599 (13) | Na1—O3 | 2.4245 (13) |
Na1—O4i | 2.3689 (13) | Na1—O3ii | 2.5086 (13) |
Na1—O1 | 2.4141 (13) | Na1—O2 | 2.5387 (14) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x, y−1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H42···O1iii | 0.84 (3) | 1.94 (3) | 2.7582 (17) | 163 (2) |
O4—H41···O2iv | 0.76 (3) | 2.03 (3) | 2.7874 (17) | 171 (2) |
O3—H31···O1v | 0.88 (3) | 1.97 (3) | 2.7716 (16) | 151 (2) |
O3—H32···O2i | 0.77 (3) | 2.10 (3) | 2.8265 (16) | 158 (2) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (iii) −x, y+1/2, −z+1/2; (iv) −x, −y+1, −z+1; (v) x, −y+3/2, z+1/2. |
Acknowledgements
MD acknowledges the Australian Government for the award of an Endeavour Post Doctoral Fellowship for the year 2009–2010.
References
Danish, M., Saleem, I., Ahmad, N., Raza, A. R., Starosta, W. & Leciejewicz, J. (2010). Acta Cryst. E66, m137. Web of Science CSD CrossRef IUCr Journals Google Scholar
Emmet, E. A. & Suskind, R. R. (1973). J. Investig. Dermitol. 61, 282–285. CrossRef Web of Science Google Scholar
Kuma (1996). KM-4 Software. Kuma Diffraction Ltd, Wrocław, Poland. Google Scholar
Kuma (2001). DATAPROC. Kuma Diffraction Ltd, Wrocław, Poland. Google Scholar
Oxford Diffraction (2008). CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England Google Scholar
Reynolds, T. (1978). Ann. Bot. 42, 419–427. CAS Google Scholar
Shahzadi, S., Shahid, K. & Ali, S. (2007). Russ. J. Coord. Chem. 33, 403–411. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
2-methylbenzoic and 4-methylbenzoic acids were studied as potent allergic sensitizers when applied to human skin (Emmet & Suskind, 1973). They are also used for the inhibition of lettuce fruit germination (Reynolds, 1978). The title compound was isolated as an intermediate during synthesis of biologically active organotin carboxylates (Shahzadi et al., 2007).
In the polymeric structure of the title compound, [Na(C8H7O2)(H2O)2]n, each sodium ion is coordinated by the carboxylic O atoms of the bidentate anion and by four bridging water O atoms (Fig.1). The coordination geometry around the Na+ cation is distorted octahedral with the equatorial plane composed of the carboxylate atoms O1 and O2 and the symmetry-related water O4 and O4i atoms [r.m.s. is 0.0580 (2) Å]. Water O3 and O3ii atoms are at the apical positions. The resulting coordination differs from the one reported in the structure of the Na+ complex with the 2-methyl-3,5-dinitrobenzoate anion. Here the metal exhibits coordination number 7 (Danish et al., 2010). The 2-methylbenzoate ring in the title compound is planar with a r.m.s. of 0.0089 (2) Å; the carboxylic group C17/O1/O2 makes an dihedral angle of 37.1 (2)° with the aromatic ring. Na+ cations form sheets parallel to the (100) plane in which they are grouped into pairs (Fig. 2). In such a pair, Na+ cations are coordinated by ligands with their 2-methylbenzoate rings pointing in the same direction but twisted by an angle of 73.0 (2)° relative to each other. Water O atoms bridge in two directions: via O4 atoms along the b axis and via O3 atoms along the c axis. Water molecules act as donors and carboxylate O atoms as acceptors in a network of O—H··· O hydrogen bonds that consolidate the crystal structure. Geometrical parameters of the hydrogen bonding are listed in Table 2.