organic compounds
2-(4-Fluorophenyl)-N-{4-[6-(4-fluorophenyl)-2,3-dihydroimidazo[2,1-b][1,3]thiazol-5-yl]pyridin-2-yl}acetamide
aEberhard-Karls-University Tübingen, Auf der Morgenstelle 8, 72076 Tübingen, Germany, bUniversity Mainz, Duesbergweg 10-14, 55099 Mainz, Germany, and cc-a-i-r biosciences GmbH, Paul-Ehrlich-Strasse 15, 72076 Tübingen, Germany
*Correspondence e-mail: stefan.laufer@uni-tuebingen.de
In the 24H18F2N4OS, the imidazole system makes dihedral angles of 34.3 (1) and 43.9 (1)°, respectively, with the directly attached 4-fluorophenyl and pyridine rings. The is stabilized by intermolecular N—H⋯N hydrogen bonding and by an intramolecular C—H⋯O hydrogen interaction. The F atom of the 2-(4-fluorophenyl) group is disordered over two positions with site-occupancy factors of 0.75 and 0.25.
of the title compound, CRelated literature
For related compounds and their biological relevance, see: Ziegler et al. (2009).
Experimental
Crystal data
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Data collection
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
https://doi.org/10.1107/S1600536810012766/im2189sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810012766/im2189Isup2.hkl
4-fluorphenylacetic acid (296 mg) was dissolved in 3 ml N-methylpyrrolidinone. After addition of 332 mg of carbonyldiimidazole the mixture was stirred for 1 h at room temperature. 200 mg 4-[6-(4-fluorophenyl)-2,3-dihydroimidazo[2,1-b][1,3]thiazol-5-yl]pyridin-2-amine was added and the reaction mixture was heated to 383 K for 19 h. The reaction mixture was quenched with a solution of concentrated sodium hydrogen carbonate and extracted with ethylacetate. The crude product was purified by flash
(eluent: ethylacetate/hexane 2/1) to yield 155 mg (54%) of the title compound. Crystals suitable for X-ray analysis were obtained by slow crystallization from methanol at room temperature.Hydrogen atoms attached to carbons were placed at calculated positions with C—H = 0.95 Å (aromatic) or 0.98–0.99 Å (sp3 C-atom). All H atoms were refined in the riding-model approximation with isotropic displacement parameters (set at 1.2–1.5 times of the Ueq of the parent atom). The flourine F1 is disordered over two positions with s.o.f 0.75:0.25.
SKF86002 was an early lead compound of many imidazole based p38 MAP kinase inhibitors. A further improvement of these inhibitors was the modification of the pyridyl moiety by substitution with
in C-2 position of the pyridine. This donor acceptor system can interact with hinge region/MET109 by bidentate hydrogen bonding. Additional interactions of the attached residues with the hydrophobic region II strongly increases potency of these compounds (Ziegler et al. 2009).The imidazole system of the title compound 2-(4-fluorophenyl)-N-{4-[6-(4-fluorophenyl)-2,3-dihydroimidazo[2,1-b][1,3] thiazol-5-yl]-pyridin-2-yl}acetamide, C24H18F2N4OS, makes dihedral angles of 34.3 (1)° and 43.9 (1)° with the directly attached 4-fluorophenyl and the pyridine rings, respectively. The
is characterized by an intermolecular hydrogen bond N13—H13···N6 (2.02 Å). The is stabilized by an intramolecular C8—H8···O15 (2.24 Å) interaction. The flourine atom F1 is disordered over two positions with s.o.f 0.75:0.25.For related compounds and their biological relevance, see: Ziegler et al. (2009).
Data collection: APEX2 (Bruker, 2006); cell
APEX2 (Bruker, 2006); data reduction: APEX2 (Bruker, 2006); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. View of compound I. Displacement ellipsoids are drawn at the 50% probability level. |
C24H18F2N4OS | F(000) = 928 |
Mr = 448.48 | Dx = 1.390 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C -2yc | Cell parameters from 3757 reflections |
a = 4.9179 (3) Å | θ = 2.2–26.4° |
b = 23.592 (1) Å | µ = 0.19 mm−1 |
c = 18.4834 (9) Å | T = 173 K |
β = 91.523 (2)° | Plate, yellow |
V = 2143.8 (2) Å3 | 0.35 × 0.16 × 0.08 mm |
Z = 4 |
Bruker SMART APEXII diffractometer | 4129 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.028 |
Graphite monochromator | θmax = 28.2°, θmin = 1.7° |
CCD scan | h = −6→6 |
10277 measured reflections | k = −30→28 |
4846 independent reflections | l = −23→24 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.090 | w = 1/[σ2(Fo2) + (0.0433P)2 + 0.4891P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
4846 reflections | Δρmax = 0.23 e Å−3 |
298 parameters | Δρmin = −0.20 e Å−3 |
2 restraints | Absolute structure: Flack (1983), 2197 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.07 (6) |
C24H18F2N4OS | V = 2143.8 (2) Å3 |
Mr = 448.48 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 4.9179 (3) Å | µ = 0.19 mm−1 |
b = 23.592 (1) Å | T = 173 K |
c = 18.4834 (9) Å | 0.35 × 0.16 × 0.08 mm |
β = 91.523 (2)° |
Bruker SMART APEXII diffractometer | 4129 reflections with I > 2σ(I) |
10277 measured reflections | Rint = 0.028 |
4846 independent reflections |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.090 | Δρmax = 0.23 e Å−3 |
S = 1.03 | Δρmin = −0.20 e Å−3 |
4846 reflections | Absolute structure: Flack (1983), 2197 Friedel pairs |
298 parameters | Absolute structure parameter: 0.07 (6) |
2 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.82180 (11) | 0.16231 (2) | −0.12400 (3) | 0.03583 (14) | |
F1A | −0.3136 (9) | −0.09848 (19) | 0.2022 (2) | 0.0837 (13) | 0.75 |
F1B | −0.454 (3) | −0.0837 (5) | 0.1902 (9) | 0.086 (4) | 0.25 |
F2 | 0.7391 (4) | 0.53748 (6) | 0.01213 (10) | 0.0609 (4) | |
C2 | 0.6645 (6) | 0.11864 (10) | −0.05475 (12) | 0.0420 (6) | |
H2A | 0.4683 | 0.1135 | −0.0662 | 0.050* | |
H2B | 0.7517 | 0.0808 | −0.0525 | 0.050* | |
C3 | 0.7039 (6) | 0.14935 (9) | 0.01721 (11) | 0.0386 (6) | |
H3A | 0.5578 | 0.1394 | 0.0508 | 0.046* | |
H3B | 0.8821 | 0.1398 | 0.0402 | 0.046* | |
N3A | 0.6911 (4) | 0.20911 (7) | −0.00241 (9) | 0.0294 (4) | |
C4 | 0.6770 (4) | 0.26014 (9) | 0.03519 (10) | 0.0277 (4) | |
C5 | 0.7275 (4) | 0.30126 (9) | −0.01557 (10) | 0.0266 (4) | |
N6 | 0.7779 (4) | 0.27699 (7) | −0.08266 (8) | 0.0302 (4) | |
C6A | 0.7576 (5) | 0.22229 (9) | −0.07094 (10) | 0.0301 (4) | |
C7 | 0.6335 (4) | 0.26246 (8) | 0.11346 (10) | 0.0264 (4) | |
C8 | 0.4394 (4) | 0.22883 (9) | 0.14539 (10) | 0.0265 (4) | |
H8 | 0.3224 | 0.2053 | 0.1167 | 0.032* | |
C9 | 0.4195 (4) | 0.23019 (9) | 0.22064 (10) | 0.0251 (4) | |
N10 | 0.5728 (4) | 0.26393 (7) | 0.26344 (9) | 0.0289 (4) | |
C11 | 0.7533 (5) | 0.29740 (9) | 0.23135 (11) | 0.0313 (5) | |
H11 | 0.8601 | 0.3222 | 0.2610 | 0.038* | |
C12 | 0.7934 (4) | 0.29797 (9) | 0.15769 (10) | 0.0281 (4) | |
H12 | 0.9266 | 0.3220 | 0.1375 | 0.034* | |
N13 | 0.2423 (4) | 0.19595 (7) | 0.25989 (8) | 0.0269 (4) | |
H13 | 0.2720 | 0.2071 | 0.3102 | 0.032* | |
C14 | 0.0701 (4) | 0.15550 (9) | 0.23346 (11) | 0.0289 (4) | |
O15 | 0.0457 (4) | 0.14302 (8) | 0.16963 (8) | 0.0429 (4) | |
C16 | −0.0944 (5) | 0.12612 (10) | 0.29138 (11) | 0.0328 (5) | |
H16A | 0.0147 | 0.1247 | 0.3371 | 0.039* | |
H16B | −0.2605 | 0.1485 | 0.3002 | 0.039* | |
C17 | −0.1743 (5) | 0.06690 (10) | 0.26956 (11) | 0.0339 (5) | |
C18 | −0.3773 (6) | 0.05731 (15) | 0.21804 (14) | 0.0533 (7) | |
H18 | −0.4780 | 0.0881 | 0.1979 | 0.064* | |
C19 | −0.4342 (8) | 0.00127 (19) | 0.19545 (17) | 0.0757 (12) | |
H19 | −0.5744 | −0.0061 | 0.1604 | 0.091* | |
C20 | −0.2856 (9) | −0.04181 (15) | 0.22459 (18) | 0.0753 (12) | |
C21 | −0.0855 (9) | −0.03416 (13) | 0.27436 (18) | 0.0693 (10) | |
H21 | 0.0149 | −0.0654 | 0.2934 | 0.083* | |
C22 | −0.0297 (6) | 0.02066 (11) | 0.29714 (14) | 0.0496 (7) | |
H22 | 0.1109 | 0.0268 | 0.3325 | 0.060* | |
C23 | 0.7289 (4) | 0.36344 (8) | −0.00730 (10) | 0.0254 (4) | |
C24 | 0.5520 (5) | 0.39102 (9) | 0.03857 (11) | 0.0312 (5) | |
H24 | 0.4270 | 0.3695 | 0.0656 | 0.037* | |
C25 | 0.5560 (5) | 0.44968 (10) | 0.04538 (12) | 0.0379 (5) | |
H25 | 0.4361 | 0.4684 | 0.0770 | 0.045* | |
C26 | 0.7373 (5) | 0.47988 (9) | 0.00533 (12) | 0.0371 (5) | |
C27 | 0.9136 (5) | 0.45469 (10) | −0.04073 (12) | 0.0383 (5) | |
H27 | 1.0359 | 0.4768 | −0.0680 | 0.046* | |
C28 | 0.9095 (5) | 0.39598 (9) | −0.04675 (11) | 0.0320 (5) | |
H28 | 1.0316 | 0.3777 | −0.0782 | 0.038* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0618 (4) | 0.0249 (2) | 0.0210 (2) | −0.0009 (3) | 0.0078 (2) | −0.0022 (2) |
F1A | 0.123 (4) | 0.061 (3) | 0.068 (2) | −0.052 (2) | 0.019 (2) | −0.0149 (17) |
F1B | 0.110 (10) | 0.033 (5) | 0.113 (9) | −0.036 (6) | −0.005 (8) | −0.016 (5) |
F2 | 0.0845 (12) | 0.0243 (7) | 0.0745 (11) | −0.0014 (8) | 0.0124 (9) | −0.0004 (7) |
C2 | 0.0714 (18) | 0.0268 (11) | 0.0284 (11) | −0.0066 (11) | 0.0095 (11) | 0.0002 (9) |
C3 | 0.0685 (17) | 0.0239 (11) | 0.0234 (10) | −0.0072 (11) | 0.0050 (10) | 0.0033 (8) |
N3A | 0.0477 (11) | 0.0230 (8) | 0.0177 (7) | −0.0027 (8) | 0.0049 (7) | 0.0016 (6) |
C4 | 0.0364 (11) | 0.0260 (10) | 0.0209 (9) | −0.0048 (9) | 0.0041 (8) | 0.0005 (7) |
C5 | 0.0344 (11) | 0.0265 (10) | 0.0191 (9) | −0.0031 (9) | 0.0051 (8) | −0.0002 (7) |
N6 | 0.0458 (11) | 0.0254 (9) | 0.0196 (8) | −0.0018 (8) | 0.0061 (7) | 0.0011 (7) |
C6A | 0.0454 (12) | 0.0294 (11) | 0.0158 (8) | −0.0029 (10) | 0.0046 (8) | −0.0009 (8) |
C7 | 0.0362 (11) | 0.0262 (11) | 0.0170 (9) | 0.0029 (9) | 0.0032 (8) | 0.0011 (7) |
C8 | 0.0326 (11) | 0.0267 (10) | 0.0201 (9) | −0.0020 (9) | 0.0025 (8) | −0.0009 (7) |
C9 | 0.0321 (11) | 0.0240 (10) | 0.0194 (9) | 0.0031 (8) | 0.0056 (8) | 0.0002 (7) |
N10 | 0.0414 (11) | 0.0277 (9) | 0.0179 (7) | −0.0015 (8) | 0.0048 (7) | −0.0015 (6) |
C11 | 0.0441 (13) | 0.0263 (10) | 0.0235 (9) | −0.0045 (9) | 0.0013 (9) | −0.0043 (8) |
C12 | 0.0356 (11) | 0.0241 (10) | 0.0249 (9) | −0.0017 (9) | 0.0046 (8) | 0.0001 (8) |
N13 | 0.0374 (10) | 0.0265 (9) | 0.0172 (7) | −0.0021 (8) | 0.0071 (7) | 0.0009 (6) |
C14 | 0.0314 (11) | 0.0313 (11) | 0.0240 (9) | 0.0022 (9) | 0.0015 (8) | 0.0049 (8) |
O15 | 0.0533 (10) | 0.0536 (11) | 0.0219 (7) | −0.0213 (8) | 0.0002 (7) | 0.0032 (7) |
C16 | 0.0371 (12) | 0.0358 (12) | 0.0259 (10) | −0.0019 (9) | 0.0075 (8) | 0.0047 (8) |
C17 | 0.0352 (12) | 0.0410 (13) | 0.0260 (9) | −0.0113 (10) | 0.0089 (8) | 0.0041 (9) |
C18 | 0.0392 (14) | 0.080 (2) | 0.0405 (14) | −0.0095 (14) | 0.0002 (11) | −0.0043 (13) |
C19 | 0.069 (2) | 0.118 (3) | 0.0396 (15) | −0.054 (2) | 0.0048 (15) | −0.0204 (18) |
C20 | 0.117 (3) | 0.058 (2) | 0.0525 (18) | −0.054 (2) | 0.027 (2) | −0.0082 (15) |
C21 | 0.112 (3) | 0.0334 (15) | 0.0633 (18) | −0.0212 (16) | 0.0105 (19) | 0.0129 (13) |
C22 | 0.0641 (18) | 0.0387 (14) | 0.0457 (14) | −0.0164 (13) | −0.0073 (12) | 0.0132 (11) |
C23 | 0.0330 (10) | 0.0254 (10) | 0.0177 (8) | −0.0011 (9) | −0.0014 (7) | 0.0018 (7) |
C24 | 0.0357 (12) | 0.0290 (11) | 0.0291 (10) | −0.0002 (9) | 0.0056 (9) | 0.0063 (8) |
C25 | 0.0435 (13) | 0.0351 (12) | 0.0352 (12) | 0.0086 (10) | 0.0053 (10) | 0.0003 (9) |
C26 | 0.0521 (14) | 0.0205 (10) | 0.0384 (12) | −0.0024 (10) | −0.0036 (10) | 0.0018 (9) |
C27 | 0.0468 (14) | 0.0334 (12) | 0.0348 (11) | −0.0126 (10) | 0.0026 (10) | 0.0074 (9) |
C28 | 0.0381 (13) | 0.0320 (12) | 0.0263 (10) | −0.0046 (9) | 0.0058 (9) | −0.0004 (8) |
S1—C6A | 1.755 (2) | N13—C14 | 1.358 (3) |
S1—C2 | 1.831 (2) | N13—H13 | 0.9732 |
F1A—C20 | 1.405 (5) | C14—O15 | 1.219 (2) |
F1B—C20 | 1.429 (13) | C14—C16 | 1.526 (3) |
F2—C26 | 1.365 (2) | C16—C17 | 1.503 (3) |
C2—C3 | 1.522 (3) | C16—H16A | 0.9900 |
C2—H2A | 0.9900 | C16—H16B | 0.9900 |
C2—H2B | 0.9900 | C17—C18 | 1.380 (3) |
C3—N3A | 1.457 (3) | C17—C22 | 1.391 (4) |
C3—H3A | 0.9900 | C18—C19 | 1.412 (5) |
C3—H3B | 0.9900 | C18—H18 | 0.9500 |
N3A—C6A | 1.353 (2) | C19—C20 | 1.355 (6) |
N3A—C4 | 1.393 (3) | C19—H19 | 0.9500 |
C4—C5 | 1.377 (3) | C20—C21 | 1.341 (5) |
C4—C7 | 1.469 (3) | C21—C22 | 1.385 (4) |
C5—N6 | 1.394 (2) | C21—H21 | 0.9500 |
C5—C23 | 1.475 (3) | C22—H22 | 0.9500 |
N6—C6A | 1.313 (3) | C23—C24 | 1.392 (3) |
C7—C8 | 1.385 (3) | C23—C28 | 1.394 (3) |
C7—C12 | 1.398 (3) | C24—C25 | 1.390 (3) |
C8—C9 | 1.397 (3) | C24—H24 | 0.9500 |
C8—H8 | 0.9500 | C25—C26 | 1.373 (3) |
C9—N10 | 1.340 (3) | C25—H25 | 0.9500 |
C9—N13 | 1.405 (3) | C26—C27 | 1.367 (4) |
N10—C11 | 1.338 (3) | C27—C28 | 1.390 (3) |
C11—C12 | 1.381 (3) | C27—H27 | 0.9500 |
C11—H11 | 0.9500 | C28—H28 | 0.9500 |
C12—H12 | 0.9500 | ||
C6A—S1—C2 | 88.70 (10) | O15—C14—C16 | 121.9 (2) |
C3—C2—S1 | 107.26 (15) | N13—C14—C16 | 113.82 (17) |
C3—C2—H2A | 110.3 | C17—C16—C14 | 111.93 (17) |
S1—C2—H2A | 110.3 | C17—C16—H16A | 109.2 |
C3—C2—H2B | 110.3 | C14—C16—H16A | 109.2 |
S1—C2—H2B | 110.3 | C17—C16—H16B | 109.2 |
H2A—C2—H2B | 108.5 | C14—C16—H16B | 109.2 |
N3A—C3—C2 | 103.86 (16) | H16A—C16—H16B | 107.9 |
N3A—C3—H3A | 111.0 | C18—C17—C22 | 118.5 (3) |
C2—C3—H3A | 111.0 | C18—C17—C16 | 121.1 (2) |
N3A—C3—H3B | 111.0 | C22—C17—C16 | 120.2 (2) |
C2—C3—H3B | 111.0 | C17—C18—C19 | 119.4 (3) |
H3A—C3—H3B | 109.0 | C17—C18—H18 | 120.3 |
C6A—N3A—C4 | 106.57 (16) | C19—C18—H18 | 120.3 |
C6A—N3A—C3 | 116.46 (17) | C20—C19—C18 | 119.0 (3) |
C4—N3A—C3 | 135.62 (17) | C20—C19—H19 | 120.5 |
C5—C4—N3A | 104.88 (17) | C18—C19—H19 | 120.5 |
C5—C4—C7 | 132.72 (19) | C21—C20—C19 | 123.3 (3) |
N3A—C4—C7 | 122.28 (17) | C21—C20—F1A | 113.2 (4) |
C4—C5—N6 | 110.87 (18) | C19—C20—F1A | 123.3 (4) |
C4—C5—C23 | 129.10 (17) | C21—C20—F1B | 143.6 (7) |
N6—C5—C23 | 120.02 (16) | C19—C20—F1B | 92.4 (6) |
C6A—N6—C5 | 103.95 (15) | C20—C21—C22 | 118.0 (3) |
N6—C6A—N3A | 113.68 (17) | C20—C21—H21 | 121.0 |
N6—C6A—S1 | 133.22 (15) | C22—C21—H21 | 121.0 |
N3A—C6A—S1 | 112.93 (15) | C21—C22—C17 | 121.7 (3) |
C8—C7—C12 | 118.51 (17) | C21—C22—H22 | 119.2 |
C8—C7—C4 | 121.22 (18) | C17—C22—H22 | 119.2 |
C12—C7—C4 | 120.25 (18) | C24—C23—C28 | 118.57 (19) |
C7—C8—C9 | 118.56 (18) | C24—C23—C5 | 121.78 (19) |
C7—C8—H8 | 120.7 | C28—C23—C5 | 119.65 (19) |
C9—C8—H8 | 120.7 | C25—C24—C23 | 120.9 (2) |
N10—C9—C8 | 123.24 (19) | C25—C24—H24 | 119.6 |
N10—C9—N13 | 112.57 (16) | C23—C24—H24 | 119.6 |
C8—C9—N13 | 124.18 (18) | C26—C25—C24 | 118.4 (2) |
C11—N10—C9 | 117.27 (16) | C26—C25—H25 | 120.8 |
N10—C11—C12 | 123.80 (19) | C24—C25—H25 | 120.8 |
N10—C11—H11 | 118.1 | F2—C26—C27 | 119.2 (2) |
C12—C11—H11 | 118.1 | F2—C26—C25 | 118.0 (2) |
C11—C12—C7 | 118.56 (19) | C27—C26—C25 | 122.8 (2) |
C11—C12—H12 | 120.7 | C26—C27—C28 | 118.4 (2) |
C7—C12—H12 | 120.7 | C26—C27—H27 | 120.8 |
C14—N13—C9 | 127.44 (16) | C28—C27—H27 | 120.8 |
C14—N13—H13 | 127.6 | C27—C28—C23 | 121.0 (2) |
C9—N13—H13 | 105.0 | C27—C28—H28 | 119.5 |
O15—C14—N13 | 124.24 (19) | C23—C28—H28 | 119.5 |
C6A—S1—C2—C3 | −27.8 (2) | C4—C7—C12—C11 | −177.6 (2) |
S1—C2—C3—N3A | 33.4 (2) | N10—C9—N13—C14 | −176.67 (19) |
C2—C3—N3A—C6A | −25.1 (3) | C8—C9—N13—C14 | 2.2 (3) |
C2—C3—N3A—C4 | 170.3 (2) | C9—N13—C14—O15 | 0.0 (4) |
C6A—N3A—C4—C5 | 2.2 (2) | C9—N13—C14—C16 | −179.99 (19) |
C3—N3A—C4—C5 | 167.9 (3) | O15—C14—C16—C17 | 27.2 (3) |
C6A—N3A—C4—C7 | −174.4 (2) | N13—C14—C16—C17 | −152.78 (19) |
C3—N3A—C4—C7 | −8.7 (4) | C14—C16—C17—C18 | −74.3 (3) |
N3A—C4—C5—N6 | −1.3 (2) | C14—C16—C17—C22 | 100.8 (2) |
C7—C4—C5—N6 | 174.8 (2) | C22—C17—C18—C19 | 0.6 (4) |
N3A—C4—C5—C23 | 177.6 (2) | C16—C17—C18—C19 | 175.8 (2) |
C7—C4—C5—C23 | −6.3 (4) | C17—C18—C19—C20 | −0.6 (4) |
C4—C5—N6—C6A | −0.2 (3) | C18—C19—C20—C21 | 0.1 (5) |
C23—C5—N6—C6A | −179.2 (2) | C18—C19—C20—F1A | −175.5 (3) |
C5—N6—C6A—N3A | 1.7 (3) | C18—C19—C20—F1B | 172.8 (7) |
C5—N6—C6A—S1 | −173.1 (2) | C19—C20—C21—C22 | 0.3 (5) |
C4—N3A—C6A—N6 | −2.5 (3) | F1A—C20—C21—C22 | 176.3 (3) |
C3—N3A—C6A—N6 | −171.4 (2) | F1B—C20—C21—C22 | −167.3 (12) |
C4—N3A—C6A—S1 | 173.32 (16) | C20—C21—C22—C17 | −0.2 (5) |
C3—N3A—C6A—S1 | 4.5 (3) | C18—C17—C22—C21 | −0.2 (4) |
C2—S1—C6A—N6 | −170.9 (3) | C16—C17—C22—C21 | −175.4 (3) |
C2—S1—C6A—N3A | 14.27 (19) | C4—C5—C23—C24 | −34.4 (3) |
C5—C4—C7—C8 | 140.0 (2) | N6—C5—C23—C24 | 144.5 (2) |
N3A—C4—C7—C8 | −44.5 (3) | C4—C5—C23—C28 | 146.3 (2) |
C5—C4—C7—C12 | −41.6 (4) | N6—C5—C23—C28 | −34.9 (3) |
N3A—C4—C7—C12 | 133.9 (2) | C28—C23—C24—C25 | −0.4 (3) |
C12—C7—C8—C9 | −2.5 (3) | C5—C23—C24—C25 | −179.7 (2) |
C4—C7—C8—C9 | 175.9 (2) | C23—C24—C25—C26 | 0.5 (3) |
C7—C8—C9—N10 | 2.4 (3) | C24—C25—C26—F2 | 179.8 (2) |
C7—C8—C9—N13 | −176.35 (19) | C24—C25—C26—C27 | 0.0 (4) |
C8—C9—N10—C11 | −0.3 (3) | F2—C26—C27—C28 | 179.8 (2) |
N13—C9—N10—C11 | 178.53 (19) | C25—C26—C27—C28 | −0.4 (4) |
C9—N10—C11—C12 | −1.5 (3) | C26—C27—C28—C23 | 0.5 (3) |
N10—C11—C12—C7 | 1.3 (3) | C24—C23—C28—C27 | −0.1 (3) |
C8—C7—C12—C11 | 0.9 (3) | C5—C23—C28—C27 | 179.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N13—H13···N6i | 0.97 | 2.02 | 2.980 (2) | 171 |
C8—H8···O15 | 0.95 | 2.24 | 2.845 (3) | 120 |
Symmetry code: (i) x−1/2, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C24H18F2N4OS |
Mr | 448.48 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 173 |
a, b, c (Å) | 4.9179 (3), 23.592 (1), 18.4834 (9) |
β (°) | 91.523 (2) |
V (Å3) | 2143.8 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.19 |
Crystal size (mm) | 0.35 × 0.16 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART APEXII |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10277, 4846, 4129 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.664 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.090, 1.03 |
No. of reflections | 4846 |
No. of parameters | 298 |
No. of restraints | 2 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.20 |
Absolute structure | Flack (1983), 2197 Friedel pairs |
Absolute structure parameter | 0.07 (6) |
Computer programs: APEX2 (Bruker, 2006), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N13—H13···N6i | 0.97 | 2.02 | 2.980 (2) | 171 |
C8—H8···O15 | 0.95 | 2.24 | 2.845 (3) | 120 |
Symmetry code: (i) x−1/2, −y+1/2, z+1/2. |
Acknowledgements
The authors would like to thank the Federal Ministry of Education and Research, Germany, Merckle GmbH, Ulm, Germany, and Fonds der Chemischen Industrie, Germany, for their generous support of this work.
References
Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119. Web of Science CrossRef CAS IUCr Journals Google Scholar
Bruker (2006). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Ziegler, K., Hauser, D. R. J., Unger, A., Albrecht, W. & Laufer, S. (2009). ChemMedChem, 4, 1939–1948. Web of Science CrossRef PubMed CAS Google Scholar
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SKF86002 was an early lead compound of many imidazole based p38 MAP kinase inhibitors. A further improvement of these inhibitors was the modification of the pyridyl moiety by substitution with amines in C-2 position of the pyridine. This donor acceptor system can interact with hinge region/MET109 by bidentate hydrogen bonding. Additional interactions of the attached residues with the hydrophobic region II strongly increases potency of these compounds (Ziegler et al. 2009).
The imidazole system of the title compound 2-(4-fluorophenyl)-N-{4-[6-(4-fluorophenyl)-2,3-dihydroimidazo[2,1-b][1,3] thiazol-5-yl]-pyridin-2-yl}acetamide, C24H18F2N4OS, makes dihedral angles of 34.3 (1)° and 43.9 (1)° with the directly attached 4-fluorophenyl and the pyridine rings, respectively. The crystal structure is characterized by an intermolecular hydrogen bond N13—H13···N6 (2.02 Å). The molecular conformation is stabilized by an intramolecular C8—H8···O15 (2.24 Å) interaction. The flourine atom F1 is disordered over two positions with s.o.f 0.75:0.25.