metal-organic compounds
Bis(1-ammonioethane-1,1-diyldiphosphonato-κ2O,O′)diaquacobalt(II) nonahydrate
aInstitute of General and Inorganic Chemistry, NAS Ukraine, Kyiv, prosp. Palladina 32/34, 03680, Ukraine
*Correspondence e-mail: complex@ionc.kiev.ua
In the title compound, [Co(C2H8NO6P2)2(H2O)2]·9H2O, the CoII atom has a slightly distorted octahedral coordination environment consisting of four deprotonated phosphonate O atoms of two independent 1-aminoethylidendiphosphonate anions and complemented by the O atoms of two water molecules in cis positions. The anions exists in the zwitterionic form (protonated amino group and two deprotonated phosphonate O atoms) and constitute two six-membered chelate rings. The also contains nine partly disordered uncoordinated water molecules, which create an extensive three-dimensional network of strong O—H⋯O and N—H⋯O hydrogen bonds.
Related literature
For general background to organic diphosphonic acids, see: Matczak-Jon & Videnova-Adrabinska (2005). For applications of transition metal bisphosphonates, see: Eberhardt et al. (2005). For related structures, see: Xiang et al. (2007); Yin et al. (2005); Dudko et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
https://doi.org/10.1107/S1600536810013681/wm2322sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810013681/wm2322Isup2.hkl
Light pink crystals of the title compound were obtained from the mixture of 10 ml (10 -2 mol/l) water solution of Co(NO3)2 with 20 ml (10 -2 mol/l) solution of 1-aminoethylidendiphosphonic acid. The combined solution was stored in a dark place for slow evaporation. After 20 days of staying, suitable crystals for X-ray data collection were obtained.
In the
of the title compound, O atoms O18 and O20 are disordered over two sites with occupancies 0.87/0.13. Disordered O atoms O22 and O23 were treated with occupancies 0.88/0.12 and 0.71/0.29, respectively. The major component of the disordered site was refined anisotropically, the corresponding minor occupied sites were refined isotropically. Hydrogen atoms bonded to the disordered oxygen atoms could not be located from difference Fourier maps and were eventually omitted from Other H atoms bonded to N and O atoms were located in a difference map and refined freely with Uiso(H) = 1.5Ueq(N) and Uiso(H) = 1.2Ueq(O), respectively. Methyl hydrogens atoms were positioned geometrically and were refined using a riding model with C—H = 0.98 Å for CH3 [Uiso(H) = 1.5Ueq(C)].Organic diphosphonic acids are potentially very powerful chelating agents used in metal extractions and are tested by the pharmaceutical industry for use as efficient drugs preventing calcification and inhibiting bone resorption (Matczak-Jon et al., 2005). There is evidence that application of transition metal bisphosphonates can improve fixation of cementless metal implants by enhancing the extent of osseointegration (Eberhardt et al., 2005). In this respect, a detailed structure-correlated study of the individual properties and the complex-forming driving factors is desired in order to sufficiently understand bisphosphonate physiological activities.
Several structures of CoII aminoethylidenediphosphonates have been reported previously (Xiang et al. 2007; Yin et al. 2005). The main difference between these structures and the title compound is the presence of two water molecules instead of a 1,10-phenanthroline ligand in the coordination environment of the transition metal ion (Xiang et al. 2007), leading also to a different symmetry.
The
of the title compound contains one molecule of the complex (Fig.1). Two 1-aminoethylidendiphosphonate anions chelate the central metal ion via two oxygen atoms from phosphonate groups forming six-membered non-planar metalla rings. Two water molecules complement the slightly distorted octahedral coordination environment of Co in cis-position. The Co—O bond lengths have expected values and conform with the previously reported related structures (Xiang et al., 2007). The values of the O—Co—O angles are in the range from 89.23 (7)° to 91.54 (5)°. The Co1—O1—P1—C1—P2—O4 and Co1—O7—P3—C3—P4—O10 metalla cycles have an with the C1 and C3 atoms out of plane by 0.850 (2) Å and 0.795 (2) Å, respectively. The dihedral angle between the planar fragments Co1—O1—P1—P2—O4 and Co1—O7—P3—P4—O10 is 84.20 (3)°. The coordinated ligand molecules exists in the zwitterionic form with a proton transfer from one of the phosphonic groups to the amino group which is representative for all 1-aminodiphosphonic acids. In addition, the amino group does also not participate in coordination (Dudko et al. 2009).In the
of the title compound, nine solvent water molecules are present. Such an amount of solvent molecules could be explained by the presence of two coordinated water molecules in addition to the more hydrophilic phosphonate groups. As a result, a 3-D network of mostly strong O—H···O and N—H···O hydrogen bonds is observed in the structure (Fig. 2; Table 1). Several H-bonds can not be unambiguously derived from the model because some of the water molecules are disordered.For general background to organic diphosphonic acids, see: Matczak-Jon & Videnova-Adrabinska (2005). For applications of transition metal bisphosphonates, see: Eberhardt et al. (2005). For related structures, see: Xiang et al. (2007); Yin et al. (2005); Dudko et al. (2009).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: publCIF (Westrip, 2009).Fig. 1. The molecular structure of title compound showing 50% probability displacement ellipsoids for the non-hydrogen atoms. Solvent water molecules are omitted for clarity. | |
Fig. 2. Crystal packing of title compound, in a projection along the c axis. Dashed lines indicate hydrogen bonds. |
[Co(C2H8NO6P2)2(H2O)2]·9H2O | F(000) = 1388 |
Mr = 665.17 | Dx = 1.767 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9983 reflections |
a = 15.1925 (3) Å | θ = 2.3–28.4° |
b = 13.2046 (2) Å | µ = 1.04 mm−1 |
c = 12.9688 (2) Å | T = 173 K |
β = 106.0866 (11)° | Block, light pink |
V = 2499.81 (7) Å3 | 0.30 × 0.24 × 0.20 mm |
Z = 4 |
Bruker APEX-II CCD diffractometer | 6273 independent reflections |
Radiation source: fine-focus sealed tube | 5626 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
Detector resolution: 8.33 pixels mm-1 | θmax = 28.4°, θmin = 1.4° |
φ and ω scans | h = −19→20 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −17→17 |
Tmin = 0.749, Tmax = 0.820 | l = −17→17 |
51914 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | w = 1/[σ2(Fo2) + (0.0396P)2 + 3.3375P] where P = (Fo2 + 2Fc2)/3 |
6273 reflections | (Δ/σ)max = 0.001 |
401 parameters | Δρmax = 0.73 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
[Co(C2H8NO6P2)2(H2O)2]·9H2O | V = 2499.81 (7) Å3 |
Mr = 665.17 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 15.1925 (3) Å | µ = 1.04 mm−1 |
b = 13.2046 (2) Å | T = 173 K |
c = 12.9688 (2) Å | 0.30 × 0.24 × 0.20 mm |
β = 106.0866 (11)° |
Bruker APEX-II CCD diffractometer | 6273 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5626 reflections with I > 2σ(I) |
Tmin = 0.749, Tmax = 0.820 | Rint = 0.030 |
51914 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | Δρmax = 0.73 e Å−3 |
6273 reflections | Δρmin = −0.29 e Å−3 |
401 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Co1 | 0.255576 (18) | 0.49258 (2) | 0.52538 (2) | 0.01238 (8) | |
P1 | 0.40125 (3) | 0.68696 (4) | 0.57579 (4) | 0.01281 (11) | |
P2 | 0.37271 (3) | 0.58209 (4) | 0.35868 (4) | 0.01196 (11) | |
P3 | 0.06525 (3) | 0.58713 (4) | 0.36181 (4) | 0.01226 (11) | |
P4 | 0.08900 (3) | 0.35638 (4) | 0.36325 (4) | 0.01415 (11) | |
C1 | 0.36957 (13) | 0.70306 (15) | 0.42887 (16) | 0.0131 (4) | |
C2 | 0.43053 (15) | 0.78295 (17) | 0.39660 (17) | 0.0188 (4) | |
H21C | 0.4116 | 0.7914 | 0.3185 | 0.028* | |
H22C | 0.4946 | 0.7608 | 0.4198 | 0.028* | |
H23C | 0.4243 | 0.8477 | 0.4309 | 0.028* | |
C3 | 0.06352 (13) | 0.47197 (16) | 0.28100 (16) | 0.0141 (4) | |
C4 | −0.02844 (14) | 0.46254 (19) | 0.19417 (17) | 0.0204 (4) | |
H41C | −0.0374 | 0.5219 | 0.1470 | 0.031* | |
H42C | −0.0784 | 0.4586 | 0.2283 | 0.031* | |
H43C | −0.0282 | 0.4011 | 0.1518 | 0.031* | |
N1 | 0.27212 (12) | 0.74065 (14) | 0.39596 (15) | 0.0142 (3) | |
H11N | 0.2720 (19) | 0.799 (2) | 0.426 (2) | 0.021* | |
H12N | 0.237 (2) | 0.701 (2) | 0.412 (2) | 0.021* | |
H13N | 0.2560 (19) | 0.749 (2) | 0.328 (2) | 0.021* | |
N2 | 0.13796 (12) | 0.48190 (15) | 0.22493 (15) | 0.0165 (3) | |
H21N | 0.1347 (19) | 0.429 (2) | 0.179 (2) | 0.025* | |
H22N | 0.193 (2) | 0.486 (2) | 0.273 (2) | 0.025* | |
H23N | 0.128 (2) | 0.538 (2) | 0.183 (2) | 0.025* | |
O1 | 0.33239 (10) | 0.61709 (12) | 0.60220 (11) | 0.0160 (3) | |
O2 | 0.40782 (10) | 0.79109 (11) | 0.62352 (12) | 0.0181 (3) | |
O3 | 0.49936 (10) | 0.64009 (13) | 0.60579 (13) | 0.0188 (3) | |
H3O | 0.502 (2) | 0.590 (2) | 0.605 (2) | 0.023* | |
O4 | 0.31168 (10) | 0.50763 (11) | 0.39358 (12) | 0.0154 (3) | |
O5 | 0.32357 (10) | 0.60670 (12) | 0.23804 (12) | 0.0171 (3) | |
H5O | 0.3517 (19) | 0.640 (2) | 0.211 (2) | 0.020* | |
O6 | 0.47085 (10) | 0.55160 (12) | 0.37641 (12) | 0.0178 (3) | |
O7 | 0.15729 (9) | 0.59446 (11) | 0.44381 (11) | 0.0151 (3) | |
O8 | 0.06089 (11) | 0.67523 (12) | 0.28140 (13) | 0.0191 (3) | |
H8O | 0.017 (2) | 0.695 (2) | 0.258 (2) | 0.023* | |
O9 | −0.01614 (10) | 0.58374 (12) | 0.40569 (12) | 0.0179 (3) | |
O10 | 0.17939 (10) | 0.37086 (11) | 0.44643 (12) | 0.0179 (3) | |
O11 | 0.08724 (10) | 0.26901 (12) | 0.28832 (12) | 0.0195 (3) | |
O12 | 0.00608 (11) | 0.34512 (13) | 0.41132 (13) | 0.0199 (3) | |
H12O | 0.0100 (19) | 0.378 (2) | 0.467 (2) | 0.024* | |
O13 | 0.35601 (12) | 0.39698 (14) | 0.61576 (15) | 0.0238 (4) | |
H131 | 0.407 (2) | 0.403 (2) | 0.614 (2) | 0.029* | |
H132 | 0.340 (2) | 0.341 (3) | 0.611 (2) | 0.029* | |
O14 | 0.18902 (11) | 0.48630 (13) | 0.64577 (13) | 0.0198 (3) | |
H141 | 0.210 (2) | 0.456 (2) | 0.702 (3) | 0.024* | |
H142 | 0.140 (2) | 0.472 (2) | 0.630 (2) | 0.024* | |
O15 | 0.19611 (13) | 0.70714 (14) | 0.67947 (14) | 0.0234 (4) | |
H151 | 0.235 (2) | 0.680 (2) | 0.660 (2) | 0.028* | |
H152 | 0.165 (2) | 0.671 (3) | 0.674 (3) | 0.028* | |
O16 | 0.10482 (14) | 0.62776 (16) | 0.06388 (15) | 0.0310 (4) | |
H161 | 0.130 (2) | 0.679 (3) | 0.099 (3) | 0.037* | |
H162 | 0.143 (2) | 0.610 (3) | 0.026 (3) | 0.037* | |
O17 | 0.24161 (13) | 0.93732 (14) | 0.46692 (16) | 0.0265 (4) | |
H171 | 0.287 (2) | 0.949 (3) | 0.506 (3) | 0.032* | |
H172 | 0.229 (2) | 0.979 (3) | 0.429 (3) | 0.032* | |
O19 | 0.44927 (14) | 0.42724 (16) | 0.85539 (17) | 0.0329 (4) | |
H191 | 0.415 (2) | 0.433 (3) | 0.793 (3) | 0.039* | |
H192 | 0.483 (3) | 0.385 (3) | 0.866 (3) | 0.039* | |
O21 | 0.60125 (14) | 0.55256 (16) | 0.94457 (19) | 0.0359 (4) | |
H211 | 0.559 (3) | 0.523 (3) | 0.907 (3) | 0.043* | |
H212 | 0.590 (2) | 0.567 (3) | 1.015 (3) | 0.043* | |
O18A | 0.77849 (14) | 0.88751 (17) | 0.66533 (16) | 0.0234 (8) | 0.873 (11) |
O20A | 0.3072 (2) | 0.20567 (19) | 0.6380 (3) | 0.0415 (11) | 0.869 (14) |
O22A | 0.67469 (18) | 0.7176 (2) | 0.6366 (4) | 0.0409 (12) | 0.876 (13) |
O23A | 0.1129 (3) | 0.3552 (6) | 0.0452 (6) | 0.0420 (16) | 0.71 (3) |
O18B | 0.747 (3) | 0.840 (3) | 0.668 (3) | 0.101 (12)* | 0.127 (11) |
O20B | 0.350 (3) | 0.197 (2) | 0.684 (3) | 0.076 (10)* | 0.131 (14) |
O22B | 0.6582 (15) | 0.7397 (17) | 0.579 (3) | 0.042 (6)* | 0.124 (13) |
O23B | 0.1074 (8) | 0.3242 (16) | 0.0717 (14) | 0.048 (3)* | 0.29 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.01106 (13) | 0.01304 (14) | 0.01351 (13) | −0.00105 (9) | 0.00416 (10) | 0.00019 (10) |
P1 | 0.0123 (2) | 0.0130 (2) | 0.0135 (2) | −0.00120 (18) | 0.00427 (18) | −0.00135 (18) |
P2 | 0.0114 (2) | 0.0119 (2) | 0.0137 (2) | −0.00023 (17) | 0.00541 (17) | −0.00051 (18) |
P3 | 0.0101 (2) | 0.0140 (2) | 0.0133 (2) | 0.00027 (17) | 0.00432 (17) | 0.00080 (18) |
P4 | 0.0142 (2) | 0.0133 (2) | 0.0157 (2) | −0.00344 (18) | 0.00540 (18) | −0.00208 (19) |
C1 | 0.0119 (8) | 0.0131 (9) | 0.0154 (9) | −0.0009 (7) | 0.0056 (7) | −0.0006 (7) |
C2 | 0.0221 (10) | 0.0161 (10) | 0.0206 (10) | −0.0057 (8) | 0.0102 (8) | −0.0005 (8) |
C3 | 0.0121 (8) | 0.0177 (10) | 0.0135 (8) | −0.0022 (7) | 0.0053 (7) | −0.0013 (7) |
C4 | 0.0162 (9) | 0.0272 (12) | 0.0164 (9) | −0.0025 (8) | 0.0020 (8) | −0.0024 (9) |
N1 | 0.0146 (8) | 0.0126 (9) | 0.0157 (8) | 0.0005 (6) | 0.0049 (6) | 0.0004 (7) |
N2 | 0.0154 (8) | 0.0186 (9) | 0.0169 (8) | −0.0017 (7) | 0.0064 (7) | −0.0012 (7) |
O1 | 0.0161 (7) | 0.0180 (7) | 0.0150 (7) | −0.0036 (6) | 0.0062 (5) | −0.0009 (6) |
O2 | 0.0222 (7) | 0.0143 (7) | 0.0193 (7) | −0.0018 (6) | 0.0083 (6) | −0.0045 (6) |
O3 | 0.0143 (7) | 0.0166 (7) | 0.0246 (8) | 0.0010 (6) | 0.0038 (6) | −0.0001 (7) |
O4 | 0.0170 (7) | 0.0132 (7) | 0.0189 (7) | −0.0030 (5) | 0.0095 (6) | −0.0016 (5) |
O5 | 0.0183 (7) | 0.0189 (8) | 0.0143 (7) | −0.0020 (6) | 0.0050 (5) | 0.0013 (6) |
O6 | 0.0125 (6) | 0.0175 (7) | 0.0249 (7) | 0.0006 (6) | 0.0078 (6) | −0.0010 (6) |
O7 | 0.0119 (6) | 0.0145 (7) | 0.0177 (7) | 0.0005 (5) | 0.0020 (5) | −0.0005 (6) |
O8 | 0.0159 (7) | 0.0200 (8) | 0.0223 (8) | 0.0043 (6) | 0.0068 (6) | 0.0073 (6) |
O9 | 0.0135 (7) | 0.0236 (8) | 0.0192 (7) | −0.0022 (6) | 0.0088 (6) | −0.0036 (6) |
O10 | 0.0184 (7) | 0.0147 (7) | 0.0188 (7) | −0.0015 (6) | 0.0024 (6) | −0.0002 (6) |
O11 | 0.0185 (7) | 0.0187 (8) | 0.0221 (7) | −0.0035 (6) | 0.0070 (6) | −0.0068 (6) |
O12 | 0.0206 (7) | 0.0221 (8) | 0.0204 (7) | −0.0081 (6) | 0.0112 (6) | −0.0056 (6) |
O13 | 0.0156 (7) | 0.0193 (8) | 0.0364 (9) | −0.0003 (6) | 0.0071 (7) | 0.0082 (7) |
O14 | 0.0145 (7) | 0.0269 (9) | 0.0186 (8) | −0.0058 (6) | 0.0054 (6) | 0.0001 (6) |
O15 | 0.0258 (9) | 0.0214 (9) | 0.0252 (8) | −0.0049 (7) | 0.0108 (7) | −0.0066 (7) |
O16 | 0.0389 (10) | 0.0333 (10) | 0.0234 (8) | −0.0088 (8) | 0.0127 (8) | −0.0040 (8) |
O17 | 0.0268 (9) | 0.0222 (9) | 0.0283 (9) | 0.0019 (7) | 0.0036 (7) | −0.0002 (7) |
O19 | 0.0286 (9) | 0.0351 (11) | 0.0330 (10) | 0.0094 (8) | 0.0052 (8) | −0.0034 (8) |
O21 | 0.0277 (10) | 0.0321 (11) | 0.0470 (12) | 0.0015 (8) | 0.0086 (9) | −0.0061 (9) |
O18A | 0.0236 (11) | 0.0192 (12) | 0.0270 (11) | −0.0037 (8) | 0.0064 (8) | −0.0031 (8) |
O20A | 0.0413 (19) | 0.0277 (14) | 0.055 (2) | −0.0005 (10) | 0.0119 (15) | 0.0096 (11) |
O22A | 0.0299 (13) | 0.0307 (14) | 0.064 (3) | −0.0050 (10) | 0.0168 (13) | −0.0156 (15) |
O23A | 0.063 (2) | 0.034 (3) | 0.032 (2) | −0.0083 (17) | 0.0194 (16) | −0.0152 (19) |
Co1—O7 | 2.0697 (14) | C3—C4 | 1.537 (3) |
Co1—O13 | 2.0747 (17) | C4—H41C | 0.9800 |
Co1—O10 | 2.0771 (15) | C4—H42C | 0.9800 |
Co1—O14 | 2.0837 (16) | C4—H43C | 0.9800 |
Co1—O1 | 2.1007 (15) | N1—H11N | 0.86 (3) |
Co1—O4 | 2.1201 (15) | N1—H12N | 0.81 (3) |
P1—O2 | 1.4999 (15) | N1—H13N | 0.85 (3) |
P1—O1 | 1.5039 (15) | N2—H21N | 0.91 (3) |
P1—O3 | 1.5604 (16) | N2—H22N | 0.90 (3) |
P1—C1 | 1.844 (2) | N2—H23N | 0.90 (3) |
P2—O6 | 1.4993 (15) | O3—H3O | 0.66 (3) |
P2—O4 | 1.5047 (15) | O5—H5O | 0.76 (3) |
P2—O5 | 1.5696 (15) | O8—H8O | 0.70 (3) |
P2—C1 | 1.846 (2) | O12—H12O | 0.83 (3) |
P3—O9 | 1.4982 (15) | O13—H131 | 0.79 (3) |
P3—O7 | 1.5071 (14) | O13—H132 | 0.77 (3) |
P3—O8 | 1.5515 (16) | O14—H141 | 0.82 (3) |
P3—C3 | 1.843 (2) | O14—H142 | 0.74 (3) |
P4—O11 | 1.5038 (16) | O15—H151 | 0.80 (3) |
P4—O10 | 1.5050 (15) | O15—H152 | 0.66 (3) |
P4—O12 | 1.5599 (16) | O16—H161 | 0.85 (4) |
P4—C3 | 1.841 (2) | O16—H162 | 0.89 (4) |
C1—N1 | 1.507 (3) | O17—H171 | 0.75 (3) |
C1—C2 | 1.536 (3) | O17—H172 | 0.73 (4) |
C2—H21C | 0.9800 | O19—H191 | 0.84 (4) |
C2—H22C | 0.9800 | O19—H192 | 0.75 (4) |
C2—H23C | 0.9800 | O21—H211 | 0.80 (4) |
C3—N2 | 1.510 (3) | O21—H212 | 1.00 (4) |
O7—Co1—O13 | 176.20 (7) | H21C—C2—H22C | 109.5 |
O7—Co1—O10 | 91.52 (6) | C1—C2—H23C | 109.5 |
O13—Co1—O10 | 91.71 (7) | H21C—C2—H23C | 109.5 |
O7—Co1—O14 | 88.73 (6) | H22C—C2—H23C | 109.5 |
O13—Co1—O14 | 89.20 (7) | N2—C3—C4 | 107.71 (16) |
O10—Co1—O14 | 91.08 (6) | N2—C3—P4 | 106.60 (14) |
O7—Co1—O1 | 87.76 (6) | C4—C3—P4 | 111.09 (15) |
O13—Co1—O1 | 89.05 (7) | N2—C3—P3 | 107.91 (14) |
O10—Co1—O1 | 178.83 (6) | C4—C3—P3 | 110.50 (15) |
O14—Co1—O1 | 89.83 (6) | P4—C3—P3 | 112.77 (10) |
O7—Co1—O4 | 85.48 (6) | C3—C4—H41C | 109.5 |
O13—Co1—O4 | 96.63 (7) | C3—C4—H42C | 109.5 |
O10—Co1—O4 | 88.21 (6) | H41C—C4—H42C | 109.5 |
O14—Co1—O4 | 174.14 (6) | C3—C4—H43C | 109.5 |
O1—Co1—O4 | 90.82 (6) | H41C—C4—H43C | 109.5 |
O2—P1—O1 | 116.06 (9) | H42C—C4—H43C | 109.5 |
O2—P1—O3 | 108.12 (9) | C1—N1—H11N | 106.9 (18) |
O1—P1—O3 | 112.13 (9) | C1—N1—H12N | 112 (2) |
O2—P1—C1 | 106.81 (9) | H11N—N1—H12N | 112 (3) |
O1—P1—C1 | 107.89 (9) | C1—N1—H13N | 108.4 (19) |
O3—P1—C1 | 105.14 (9) | H11N—N1—H13N | 108 (3) |
O6—P2—O4 | 116.61 (9) | H12N—N1—H13N | 109 (3) |
O6—P2—O5 | 112.75 (9) | C3—N2—H21N | 109.5 (18) |
O4—P2—O5 | 105.82 (9) | C3—N2—H22N | 110.4 (19) |
O6—P2—C1 | 108.50 (9) | H21N—N2—H22N | 112 (3) |
O4—P2—C1 | 108.35 (9) | C3—N2—H23N | 110.0 (18) |
O5—P2—C1 | 104.02 (9) | H21N—N2—H23N | 106 (3) |
O9—P3—O7 | 115.85 (9) | H22N—N2—H23N | 109 (3) |
O9—P3—O8 | 113.06 (9) | P1—O1—Co1 | 134.61 (9) |
O7—P3—O8 | 106.53 (9) | P1—O3—H3O | 116 (3) |
O9—P3—C3 | 107.95 (9) | P2—O4—Co1 | 136.28 (9) |
O7—P3—C3 | 108.57 (9) | P2—O5—H5O | 114 (2) |
O8—P3—C3 | 104.19 (9) | P3—O7—Co1 | 135.71 (9) |
O11—P4—O10 | 114.20 (9) | P3—O8—H8O | 115 (3) |
O11—P4—O12 | 108.26 (9) | P4—O10—Co1 | 136.45 (10) |
O10—P4—O12 | 113.78 (9) | P4—O12—H12O | 115 (2) |
O11—P4—C3 | 107.37 (9) | Co1—O13—H131 | 120 (2) |
O10—P4—C3 | 108.28 (9) | Co1—O13—H132 | 112 (2) |
O12—P4—C3 | 104.31 (9) | H131—O13—H132 | 112 (3) |
N1—C1—C2 | 108.41 (17) | Co1—O14—H141 | 123 (2) |
N1—C1—P1 | 106.58 (13) | Co1—O14—H142 | 117 (2) |
C2—C1—P1 | 110.87 (14) | H141—O14—H142 | 104 (3) |
N1—C1—P2 | 107.64 (13) | H151—O15—H152 | 102 (4) |
C2—C1—P2 | 111.10 (14) | H161—O16—H162 | 104 (3) |
P1—C1—P2 | 112.02 (11) | H171—O17—H172 | 109 (4) |
C1—C2—H21C | 109.5 | H191—O19—H192 | 117 (4) |
C1—C2—H22C | 109.5 | H211—O21—H212 | 110 (3) |
O2—P1—C1—N1 | −69.60 (15) | O8—P3—C3—C4 | −65.37 (16) |
O1—P1—C1—N1 | 55.84 (15) | O9—P3—C3—P4 | −69.94 (12) |
O3—P1—C1—N1 | 175.67 (13) | O7—P3—C3—P4 | 56.38 (12) |
O2—P1—C1—C2 | 48.19 (16) | O8—P3—C3—P4 | 169.62 (10) |
O1—P1—C1—C2 | 173.63 (14) | O2—P1—O1—Co1 | 152.91 (11) |
O3—P1—C1—C2 | −66.54 (16) | O3—P1—O1—Co1 | −82.16 (14) |
O2—P1—C1—P2 | 172.92 (9) | C1—P1—O1—Co1 | 33.15 (15) |
O1—P1—C1—P2 | −61.64 (12) | O7—Co1—O1—P1 | −86.87 (13) |
O3—P1—C1—P2 | 58.19 (12) | O13—Co1—O1—P1 | 95.20 (13) |
O6—P2—C1—N1 | 171.19 (13) | O14—Co1—O1—P1 | −175.60 (13) |
O4—P2—C1—N1 | −61.33 (15) | O4—Co1—O1—P1 | −1.42 (13) |
O5—P2—C1—N1 | 50.94 (15) | O6—P2—O4—Co1 | 102.36 (14) |
O6—P2—C1—C2 | 52.64 (16) | O5—P2—O4—Co1 | −131.38 (13) |
O4—P2—C1—C2 | −179.87 (14) | C1—P2—O4—Co1 | −20.33 (16) |
O5—P2—C1—C2 | −67.61 (15) | O7—Co1—O4—P2 | 81.31 (13) |
O6—P2—C1—P1 | −71.96 (12) | O13—Co1—O4—P2 | −95.52 (14) |
O4—P2—C1—P1 | 55.52 (12) | O10—Co1—O4—P2 | 172.97 (14) |
O5—P2—C1—P1 | 167.78 (10) | O1—Co1—O4—P2 | −6.38 (14) |
O11—P4—C3—N2 | −60.67 (15) | O9—P3—O7—Co1 | 92.63 (14) |
O10—P4—C3—N2 | 63.09 (15) | O8—P3—O7—Co1 | −140.66 (12) |
O12—P4—C3—N2 | −175.41 (13) | C3—P3—O7—Co1 | −28.97 (15) |
O11—P4—C3—C4 | 56.41 (16) | O10—Co1—O7—P3 | 1.53 (13) |
O10—P4—C3—C4 | −179.83 (14) | O14—Co1—O7—P3 | −89.51 (13) |
O12—P4—C3—C4 | −58.34 (16) | O1—Co1—O7—P3 | −179.38 (13) |
O11—P4—C3—P3 | −178.91 (10) | O4—Co1—O7—P3 | 89.61 (13) |
O10—P4—C3—P3 | −55.15 (12) | O11—P4—O10—Co1 | 146.29 (12) |
O12—P4—C3—P3 | 66.35 (12) | O12—P4—O10—Co1 | −88.72 (15) |
O9—P3—C3—N2 | 172.59 (13) | C3—P4—O10—Co1 | 26.74 (16) |
O7—P3—C3—N2 | −61.09 (15) | O7—Co1—O10—P4 | −0.20 (14) |
O8—P3—C3—N2 | 52.15 (15) | O13—Co1—O10—P4 | 177.79 (14) |
O9—P3—C3—C4 | 55.06 (16) | O14—Co1—O10—P4 | 88.55 (14) |
O7—P3—C3—C4 | −178.61 (14) | O4—Co1—O10—P4 | −85.63 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H11N···O17 | 0.86 (3) | 2.00 (3) | 2.836 (3) | 165 (3) |
N1—H12N···O7 | 0.81 (3) | 1.98 (3) | 2.785 (2) | 175 (3) |
N1—H13N···O15i | 0.85 (3) | 1.98 (3) | 2.810 (2) | 165 (3) |
N2—H21N···O23A | 0.91 (3) | 1.94 (3) | 2.808 (4) | 159 (3) |
N2—H22N···O4 | 0.90 (3) | 2.05 (3) | 2.944 (2) | 173 (3) |
N2—H23N···O16 | 0.90 (3) | 1.90 (3) | 2.783 (3) | 164 (3) |
O3—H3O···O6ii | 0.66 (3) | 1.92 (3) | 2.570 (2) | 169 (4) |
O5—H5O···O2i | 0.76 (3) | 1.84 (3) | 2.592 (2) | 170 (3) |
O8—H8O···O11iii | 0.70 (3) | 1.81 (3) | 2.508 (2) | 169 (3) |
O12—H12O···O9iv | 0.83 (3) | 1.71 (3) | 2.517 (2) | 165 (3) |
O13—H131···O6ii | 0.79 (3) | 1.92 (3) | 2.691 (2) | 166 (3) |
O13—H132···O20A | 0.77 (3) | 1.92 (3) | 2.671 (3) | 165 (3) |
O14—H141···O18Av | 0.82 (3) | 1.91 (3) | 2.697 (3) | 163 (3) |
O14—H142···O9iv | 0.74 (3) | 1.95 (3) | 2.688 (2) | 172 (3) |
O15—H151···O1 | 0.80 (3) | 2.01 (3) | 2.803 (2) | 177 (3) |
O15—H152···O14 | 0.66 (3) | 2.50 (3) | 2.946 (2) | 127 (3) |
O15—H152···O12iv | 0.66 (3) | 2.54 (3) | 3.049 (2) | 136 (3) |
O16—H161···O15i | 0.85 (4) | 1.94 (4) | 2.788 (3) | 176 (3) |
O16—H162···O17i | 0.89 (4) | 1.97 (4) | 2.844 (3) | 170 (3) |
O17—H171···O21vi | 0.75 (3) | 2.14 (4) | 2.795 (3) | 147 (3) |
O17—H172···O18Avii | 0.73 (4) | 2.13 (4) | 2.845 (3) | 167 (4) |
O19—H191···O13 | 0.84 (4) | 2.27 (4) | 3.063 (3) | 158 (3) |
O19—H192···O2v | 0.75 (4) | 2.04 (4) | 2.773 (3) | 166 (4) |
O21—H211···O19 | 0.80 (4) | 2.05 (4) | 2.815 (3) | 162 (4) |
O21—H212···O19viii | 1.00 (4) | 1.93 (4) | 2.914 (3) | 169 (3) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) −x, y+1/2, −z+1/2; (iv) −x, −y+1, −z+1; (v) −x+1, y−1/2, −z+3/2; (vi) −x+1, y+1/2, −z+3/2; (vii) −x+1, −y+2, −z+1; (viii) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Co(C2H8NO6P2)2(H2O)2]·9H2O |
Mr | 665.17 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 173 |
a, b, c (Å) | 15.1925 (3), 13.2046 (2), 12.9688 (2) |
β (°) | 106.0866 (11) |
V (Å3) | 2499.81 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.04 |
Crystal size (mm) | 0.30 × 0.24 × 0.20 |
Data collection | |
Diffractometer | Bruker APEX-II CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.749, 0.820 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 51914, 6273, 5626 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.669 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.090, 1.12 |
No. of reflections | 6273 |
No. of parameters | 401 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.73, −0.29 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), publCIF (Westrip, 2009).
Co1—O7 | 2.0697 (14) | Co1—O14 | 2.0837 (16) |
Co1—O13 | 2.0747 (17) | Co1—O1 | 2.1007 (15) |
Co1—O10 | 2.0771 (15) | Co1—O4 | 2.1201 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H11N···O17 | 0.86 (3) | 2.00 (3) | 2.836 (3) | 165 (3) |
N1—H12N···O7 | 0.81 (3) | 1.98 (3) | 2.785 (2) | 175 (3) |
N1—H13N···O15i | 0.85 (3) | 1.98 (3) | 2.810 (2) | 165 (3) |
N2—H21N···O23A | 0.91 (3) | 1.94 (3) | 2.808 (4) | 159 (3) |
N2—H22N···O4 | 0.90 (3) | 2.05 (3) | 2.944 (2) | 173 (3) |
N2—H23N···O16 | 0.90 (3) | 1.90 (3) | 2.783 (3) | 164 (3) |
O3—H3O···O6ii | 0.66 (3) | 1.92 (3) | 2.570 (2) | 169 (4) |
O5—H5O···O2i | 0.76 (3) | 1.84 (3) | 2.592 (2) | 170 (3) |
O8—H8O···O11iii | 0.70 (3) | 1.81 (3) | 2.508 (2) | 169 (3) |
O12—H12O···O9iv | 0.83 (3) | 1.71 (3) | 2.517 (2) | 165 (3) |
O13—H131···O6ii | 0.79 (3) | 1.92 (3) | 2.691 (2) | 166 (3) |
O13—H132···O20A | 0.77 (3) | 1.92 (3) | 2.671 (3) | 165 (3) |
O14—H141···O18Av | 0.82 (3) | 1.91 (3) | 2.697 (3) | 163 (3) |
O14—H142···O9iv | 0.74 (3) | 1.95 (3) | 2.688 (2) | 172 (3) |
O15—H151···O1 | 0.80 (3) | 2.01 (3) | 2.803 (2) | 177 (3) |
O15—H152···O14 | 0.66 (3) | 2.50 (3) | 2.946 (2) | 127 (3) |
O15—H152···O12iv | 0.66 (3) | 2.54 (3) | 3.049 (2) | 136 (3) |
O16—H161···O15i | 0.85 (4) | 1.94 (4) | 2.788 (3) | 176 (3) |
O16—H162···O17i | 0.89 (4) | 1.97 (4) | 2.844 (3) | 170 (3) |
O17—H171···O21vi | 0.75 (3) | 2.14 (4) | 2.795 (3) | 147 (3) |
O17—H172···O18Avii | 0.73 (4) | 2.13 (4) | 2.845 (3) | 167 (4) |
O19—H191···O13 | 0.84 (4) | 2.27 (4) | 3.063 (3) | 158 (3) |
O19—H192···O2v | 0.75 (4) | 2.04 (4) | 2.773 (3) | 166 (4) |
O21—H211···O19 | 0.80 (4) | 2.05 (4) | 2.815 (3) | 162 (4) |
O21—H212···O19viii | 1.00 (4) | 1.93 (4) | 2.914 (3) | 169 (3) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) −x, y+1/2, −z+1/2; (iv) −x, −y+1, −z+1; (v) −x+1, y−1/2, −z+3/2; (vi) −x+1, y+1/2, −z+3/2; (vii) −x+1, −y+2, −z+1; (viii) −x+1, −y+1, −z+2. |
References
Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dudko, A., Bon, V., Kozachkova, A. & Pekhnyo, V. (2009). Acta Cryst. E65, m459. Web of Science CSD CrossRef IUCr Journals Google Scholar
Eberhardt, C., Schwarz, M. & Kurth, A. H. (2005). J. Orthop. Sci. 10, 622–626. Web of Science CrossRef PubMed CAS Google Scholar
Matczak-Jon, E. & Videnova-Adrabinska, V. (2005). Coord. Chem. Rev. 249, 2458–2488. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organic diphosphonic acids are potentially very powerful chelating agents used in metal extractions and are tested by the pharmaceutical industry for use as efficient drugs preventing calcification and inhibiting bone resorption (Matczak-Jon et al., 2005). There is evidence that application of transition metal bisphosphonates can improve fixation of cementless metal implants by enhancing the extent of osseointegration (Eberhardt et al., 2005). In this respect, a detailed structure-correlated study of the individual properties and the complex-forming driving factors is desired in order to sufficiently understand bisphosphonate physiological activities.
Several structures of CoII aminoethylidenediphosphonates have been reported previously (Xiang et al. 2007; Yin et al. 2005). The main difference between these structures and the title compound is the presence of two water molecules instead of a 1,10-phenanthroline ligand in the coordination environment of the transition metal ion (Xiang et al. 2007), leading also to a different symmetry.
The asymmetric unit of the title compound contains one molecule of the complex (Fig.1). Two 1-aminoethylidendiphosphonate anions chelate the central metal ion via two oxygen atoms from phosphonate groups forming six-membered non-planar metalla rings. Two water molecules complement the slightly distorted octahedral coordination environment of Co in cis-position. The Co—O bond lengths have expected values and conform with the previously reported related structures (Xiang et al., 2007). The values of the O—Co—O angles are in the range from 89.23 (7)° to 91.54 (5)°. The Co1—O1—P1—C1—P2—O4 and Co1—O7—P3—C3—P4—O10 metalla cycles have an envelope conformation with the C1 and C3 atoms out of plane by 0.850 (2) Å and 0.795 (2) Å, respectively. The dihedral angle between the planar fragments Co1—O1—P1—P2—O4 and Co1—O7—P3—P4—O10 is 84.20 (3)°. The coordinated ligand molecules exists in the zwitterionic form with a proton transfer from one of the phosphonic groups to the amino group which is representative for all 1-aminodiphosphonic acids. In addition, the amino group does also not participate in coordination (Dudko et al. 2009).
In the crystal structure of the title compound, nine solvent water molecules are present. Such an amount of solvent molecules could be explained by the presence of two coordinated water molecules in addition to the more hydrophilic phosphonate groups. As a result, a 3-D network of mostly strong O—H···O and N—H···O hydrogen bonds is observed in the structure (Fig. 2; Table 1). Several H-bonds can not be unambiguously derived from the model because some of the crystal lattice water molecules are disordered.