metal-organic compounds
(2-{[2-Carboxylato-1-(4-chlorophenyl)ethyl]iminomethyl}phenolato-κ3O,N,O′)(1H-imidazole-κN3)copper(II) monohydrate
aChemistry Department, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China
*Correspondence e-mail: zouyang@zstu.edu.cn
The CuII atom of the title complex, [Cu(C16H12ClNO3)(C3H4N2)]·H2O, has a distorted square-planar coordination geometry formed by a tridentate Schiff base dianion and an imidazole ligand. The imidazole is nearly coplanar with the coordination plane, the dihedral angle between the planes being 3.73 (12)°. In the Schiff base ligand, the two benzene rings are oriented at a dihedral angle of 75.87 (12)°. O—H⋯O and N—H⋯O hydrogen bonding is present in the One H atom of the uncoordinated water molecule is disordered equally over two sites.
Related literature
Transition metal complexes of salicylaldehyde-peptides and salicylaldehyde-aminoacid et al. (1988); Wetmore et al. (2001); Zabinski & Toney (2001). For the preparation, structural characterization, appropriate spectroscopy and magnetic studies of Schiff-base complexes derived from salicylaldehyde and amino acids, see: Ganguly et al. (2008) and references cited therein. For derived from β-amino acids, see: Vančo et al. (2008).
are non-enzymatic models for pyridoxal amino acid systems, which are of importance as key intermediates in many metabolic reactions of amino acid catalyses by enzymes, see: Bkouche-WaksmanExperimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2003); cell SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810014765/xu2751sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810014765/xu2751Isup2.hkl
The Schiff base was prepared through the condensation of 3-amino-3-(4-chlorophenyl) propionic acid and salicylaldehyde. 3-Amino-3-(4-chlorophenyl) propionic acid (10 mmol) was dissolved and refluxed in absolute methanol (40 ml) containing LiOH.H2O (10 mmol). After cooled to room temperature, a solution of salicylaldehyde (10 mmol) in absolute methanol was added slowly with stirring over 10 min. Then Cu(NO3)2 (10 mmol) was added to the HLLi solution and the resulting solution was adjusted to the pH = 9-11 by 1.0 mol/L NaOH solution. After stirring at room temperature for 30 min, imidazole (10 mmol) was added to the solution with stirring. The resulting clear solution was then filtered. The filtrate was allowed to evaporate slowly at room temperature. After several days dark green crystals suitable for X-ray diffraction were obtained.
One H atom of the lattice water molecule is equally disordered over two sites. The water H atoms were placed in chemical sensitive positions and refined with distance restraint of O—H = 0.85 Å and Uiso(H) = 1.2Ueq(O). Other H atoms were positioned geometrically and constrained as riding atoms with C—H = 0.93–0.98 Å and N—H = 0.86 Å, Uiso(H) = 1.2Ueq(C,N).
Transition metal complexes of salicylaldehyde-peptides and salicylaldehyde-amino acid Schiff base are non-enzymatic models for pyridoxal-amino acid systems, which are of considerable importance as key intermediates in many metabolic reactions of amino acids catalyzed by enzymes (Zabinski et al., 2001; Wetmore et al., 2001; Bkouche-Waksman et al.,1988). Considerable effort has been devoted to the preparation, structural characterization, appropriate spectroscopy and magnetic studies of Schiff-base complexes derived from salicylaldehyde and amino acids and reduced salicylidene amino acid (Ganguly et al., 2008), but little attention has been given to Schiff base derived from β-amino acid (Vančo et al., 2008). Herein, we report the structure study of [Cu(L)(C3H4N2)]. H2O (H2L= derived from glycylglycine and salicylaldehyde, C16H14NO3Cl).
The complex crystallizes in the monoclinic
C2/c. The title molecule,is characterized by a square-planar CuII coordination with the deprotonated tridentate Schiff base dianion and one imidazole molecule in the basal plane (Fig. 1). The Cu1—N1 bond distance is 1.958 Å. The two Cu—O bonds are 1.889(Cu1—O1) and 1.950 Å (Cu1—O3). The fourth position occupied by one N atom from the imidazole ligand, with bond length of 1.980 Å (Cu1—N2). The phenyl ring [C1—C6] and the ring of C1, C6, C7, N1, O1, Cu1 chelate ring are almost coplanar with a small dihedral angle of 1.8o. Hydrogen bond between the coordinated imidazole molecule and the carboxyl oxygen atom of an adjacent, symmetry related CuL unit leads to the formation of a [CuL(C3H4N2)]2 dimer. Hydrogen bond between water molecule and CuL unit further link the dimers into two-dimension layers (Fig. 2).Transition metal complexes of salicylaldehyde-peptides and salicylaldehyde-aminoacid β-amino acid, see: Vančo et al. (2008).
are non-enzymatic models for pyridoxal amino acid systems, which are of importance as key intermediates in many metabolic reactions of amino acid catalyses by enzymes, see: Bkouche-Waksman et al. (1988); Wetmore et al. (2001); Zabinski & Toney (2001). For the preparation, structural characterization, appropriate spectroscopy and magnetic studies of Schiff-base complexes derived from salicylaldehyde and amino acids, see: Ganguly et al. (2008) and references cited therein. For derived fromData collection: SMART (Bruker, 2003); cell
SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of the title complex with atom numbering scheme; thermal ellipsoids are drawn at 40% probability level. | |
Fig. 2. Schematic representation of the hydrogen-bonded (dashed lines). |
[Cu(C16H12ClNO3)(C3H4N2)]·H2O | F(000) = 1848 |
Mr = 451.35 | Dx = 1.598 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3298 reflections |
a = 23.884 (1) Å | θ = 1.7–27.5° |
b = 4.944 (1) Å | µ = 1.34 mm−1 |
c = 32.008 (1) Å | T = 296 K |
β = 96.88 (1)° | Block, dark green |
V = 3752.4 (8) Å3 | 0.20 × 0.20 × 0.15 mm |
Z = 8 |
Bruker SMART CCD diffractometer | 4310 independent reflections |
Radiation source: fine-focus sealed tube | 3298 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
φ and ω scans | θmax = 27.5°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | h = −30→30 |
Tmin = 0.776, Tmax = 0.825 | k = −6→6 |
18085 measured reflections | l = −41→41 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0381P)2 + 2.3614P] where P = (Fo2 + 2Fc2)/3 |
4310 reflections | (Δ/σ)max < 0.001 |
253 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
[Cu(C16H12ClNO3)(C3H4N2)]·H2O | V = 3752.4 (8) Å3 |
Mr = 451.35 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 23.884 (1) Å | µ = 1.34 mm−1 |
b = 4.944 (1) Å | T = 296 K |
c = 32.008 (1) Å | 0.20 × 0.20 × 0.15 mm |
β = 96.88 (1)° |
Bruker SMART CCD diffractometer | 4310 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | 3298 reflections with I > 2σ(I) |
Tmin = 0.776, Tmax = 0.825 | Rint = 0.035 |
18085 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.33 e Å−3 |
4310 reflections | Δρmin = −0.30 e Å−3 |
253 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.257392 (11) | 0.70003 (6) | 0.103939 (8) | 0.03102 (10) | |
Cl1 | −0.00394 (3) | 1.30201 (17) | 0.18252 (3) | 0.0645 (2) | |
N1 | 0.20142 (7) | 0.4707 (4) | 0.12667 (6) | 0.0301 (4) | |
N2 | 0.31243 (7) | 0.9444 (4) | 0.08174 (6) | 0.0332 (4) | |
N3 | 0.34883 (9) | 1.2624 (4) | 0.04560 (7) | 0.0414 (5) | |
H3A | 0.3513 | 1.3915 | 0.0279 | 0.050* | |
O1 | 0.31821 (6) | 0.5542 (4) | 0.14014 (5) | 0.0406 (4) | |
O2 | 0.13208 (7) | 0.8259 (4) | 0.00906 (5) | 0.0425 (4) | |
O3 | 0.20152 (7) | 0.8490 (4) | 0.06065 (5) | 0.0436 (4) | |
C1 | 0.31811 (10) | 0.3666 (5) | 0.16842 (7) | 0.0351 (5) | |
C2 | 0.36998 (10) | 0.2833 (6) | 0.19110 (8) | 0.0439 (6) | |
H2 | 0.4033 | 0.3671 | 0.1858 | 0.053* | |
C3 | 0.37183 (11) | 0.0827 (6) | 0.22041 (7) | 0.0447 (6) | |
H3 | 0.4065 | 0.0316 | 0.2346 | 0.054* | |
C4 | 0.32307 (11) | −0.0477 (6) | 0.22958 (8) | 0.0462 (7) | |
H4 | 0.3250 | −0.1838 | 0.2498 | 0.055* | |
C5 | 0.27261 (10) | 0.0272 (5) | 0.20854 (7) | 0.0409 (6) | |
H5 | 0.2400 | −0.0594 | 0.2146 | 0.049* | |
C6 | 0.26851 (10) | 0.2331 (5) | 0.17774 (7) | 0.0329 (5) | |
C7 | 0.21439 (10) | 0.2914 (5) | 0.15579 (7) | 0.0335 (5) | |
H7 | 0.1846 | 0.1879 | 0.1633 | 0.040* | |
C8 | 0.14124 (9) | 0.4717 (5) | 0.10794 (7) | 0.0308 (5) | |
H8 | 0.1251 | 0.2993 | 0.1157 | 0.037* | |
C9 | 0.10709 (9) | 0.6933 (5) | 0.12577 (7) | 0.0313 (5) | |
C10 | 0.11509 (10) | 0.7554 (5) | 0.16848 (8) | 0.0383 (6) | |
H10 | 0.1440 | 0.6701 | 0.1857 | 0.046* | |
C11 | 0.08136 (10) | 0.9405 (6) | 0.18610 (8) | 0.0433 (6) | |
H11 | 0.0875 | 0.9788 | 0.2147 | 0.052* | |
C12 | 0.03856 (10) | 1.0673 (5) | 0.16069 (8) | 0.0426 (6) | |
C13 | 0.02920 (10) | 1.0118 (5) | 0.11820 (8) | 0.0431 (6) | |
H13 | 0.0003 | 1.0987 | 0.1013 | 0.052* | |
C14 | 0.06307 (9) | 0.8260 (5) | 0.10105 (8) | 0.0387 (6) | |
H14 | 0.0565 | 0.7881 | 0.0724 | 0.046* | |
C15 | 0.13857 (9) | 0.4720 (5) | 0.05973 (7) | 0.0331 (5) | |
H15A | 0.1617 | 0.3250 | 0.0513 | 0.040* | |
H15B | 0.1000 | 0.4373 | 0.0477 | 0.040* | |
C16 | 0.15803 (9) | 0.7320 (5) | 0.04156 (7) | 0.0325 (5) | |
C17 | 0.30207 (10) | 1.1329 (5) | 0.05273 (7) | 0.0385 (6) | |
H17 | 0.2664 | 1.1707 | 0.0389 | 0.046* | |
C18 | 0.39202 (11) | 1.1523 (6) | 0.07154 (8) | 0.0487 (7) | |
H18 | 0.4298 | 1.2016 | 0.0735 | 0.058* | |
C19 | 0.36968 (9) | 0.9583 (6) | 0.09385 (8) | 0.0408 (6) | |
H19 | 0.3897 | 0.8504 | 0.1142 | 0.049* | |
O1W | 0.48323 (8) | 0.7498 (5) | 0.01584 (7) | 0.0703 (6) | |
H1W | 0.4469 | 0.7337 | 0.0159 | 0.084* | |
H2W1 | 0.4959 | 0.8883 | 0.0066 | 0.084* | 0.50 |
H2W2 | 0.4987 | 0.6209 | 0.0050 | 0.084* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.02878 (15) | 0.03081 (17) | 0.03347 (16) | −0.00405 (12) | 0.00374 (11) | 0.00462 (13) |
Cl1 | 0.0498 (4) | 0.0640 (5) | 0.0836 (6) | 0.0023 (4) | 0.0240 (4) | −0.0184 (4) |
N1 | 0.0281 (9) | 0.0298 (11) | 0.0323 (10) | −0.0028 (8) | 0.0034 (8) | 0.0038 (9) |
N2 | 0.0315 (10) | 0.0363 (12) | 0.0314 (10) | −0.0053 (9) | 0.0027 (8) | 0.0040 (9) |
N3 | 0.0459 (12) | 0.0394 (13) | 0.0399 (11) | −0.0119 (10) | 0.0094 (9) | 0.0071 (10) |
O1 | 0.0320 (8) | 0.0453 (11) | 0.0439 (10) | −0.0041 (8) | 0.0017 (7) | 0.0127 (9) |
O2 | 0.0417 (9) | 0.0455 (11) | 0.0387 (9) | −0.0073 (8) | −0.0022 (8) | 0.0123 (8) |
O3 | 0.0362 (9) | 0.0392 (11) | 0.0525 (10) | −0.0121 (8) | −0.0064 (8) | 0.0160 (9) |
C1 | 0.0399 (13) | 0.0362 (14) | 0.0290 (12) | 0.0020 (11) | 0.0040 (10) | −0.0005 (11) |
C2 | 0.0349 (13) | 0.0546 (18) | 0.0418 (14) | 0.0031 (12) | 0.0025 (11) | 0.0028 (13) |
C3 | 0.0447 (14) | 0.0524 (17) | 0.0354 (13) | 0.0139 (13) | −0.0020 (11) | 0.0034 (13) |
C4 | 0.0584 (16) | 0.0458 (17) | 0.0340 (13) | 0.0074 (14) | 0.0034 (12) | 0.0102 (12) |
C5 | 0.0450 (14) | 0.0396 (15) | 0.0381 (13) | −0.0007 (12) | 0.0050 (11) | 0.0069 (12) |
C6 | 0.0354 (12) | 0.0322 (13) | 0.0310 (12) | 0.0030 (10) | 0.0044 (9) | 0.0014 (10) |
C7 | 0.0341 (12) | 0.0310 (13) | 0.0364 (12) | −0.0047 (11) | 0.0081 (10) | 0.0022 (11) |
C8 | 0.0276 (11) | 0.0297 (12) | 0.0349 (12) | −0.0080 (10) | 0.0026 (9) | 0.0058 (10) |
C9 | 0.0271 (11) | 0.0332 (13) | 0.0340 (12) | −0.0093 (10) | 0.0043 (9) | 0.0028 (11) |
C10 | 0.0343 (12) | 0.0436 (16) | 0.0366 (13) | −0.0048 (11) | 0.0023 (10) | 0.0048 (11) |
C11 | 0.0448 (14) | 0.0499 (17) | 0.0359 (13) | −0.0082 (13) | 0.0076 (11) | −0.0029 (13) |
C12 | 0.0344 (12) | 0.0404 (15) | 0.0552 (16) | −0.0069 (12) | 0.0152 (11) | −0.0048 (13) |
C13 | 0.0293 (12) | 0.0477 (16) | 0.0508 (15) | −0.0029 (12) | −0.0009 (11) | 0.0003 (13) |
C14 | 0.0329 (12) | 0.0457 (16) | 0.0367 (13) | −0.0029 (12) | 0.0003 (10) | −0.0016 (12) |
C15 | 0.0348 (12) | 0.0282 (13) | 0.0355 (12) | −0.0060 (10) | 0.0009 (10) | −0.0003 (11) |
C16 | 0.0325 (11) | 0.0325 (13) | 0.0332 (12) | −0.0026 (10) | 0.0073 (10) | 0.0018 (10) |
C17 | 0.0354 (12) | 0.0422 (15) | 0.0381 (13) | −0.0083 (11) | 0.0046 (10) | 0.0050 (12) |
C18 | 0.0370 (13) | 0.0574 (19) | 0.0522 (16) | −0.0136 (13) | 0.0069 (12) | 0.0030 (14) |
C19 | 0.0319 (12) | 0.0470 (16) | 0.0425 (14) | −0.0066 (11) | 0.0004 (10) | 0.0069 (12) |
O1W | 0.0450 (11) | 0.0803 (16) | 0.0830 (15) | −0.0032 (11) | −0.0032 (11) | 0.0025 (12) |
Cu1—O1 | 1.8894 (16) | C6—C7 | 1.425 (3) |
Cu1—O3 | 1.9494 (16) | C7—H7 | 0.9300 |
Cu1—N1 | 1.9582 (18) | C8—C9 | 1.518 (3) |
Cu1—N2 | 1.9789 (18) | C8—C15 | 1.537 (3) |
Cl1—C12 | 1.742 (3) | C8—H8 | 0.9800 |
N1—C7 | 1.297 (3) | C9—C10 | 1.392 (3) |
N1—C8 | 1.489 (3) | C9—C14 | 1.401 (3) |
N2—C17 | 1.318 (3) | C10—C11 | 1.383 (3) |
N2—C19 | 1.378 (3) | C10—H10 | 0.9300 |
N3—C17 | 1.331 (3) | C11—C12 | 1.379 (3) |
N3—C18 | 1.358 (3) | C11—H11 | 0.9300 |
N3—H3A | 0.8600 | C12—C13 | 1.379 (3) |
O1—C1 | 1.296 (3) | C13—C14 | 1.381 (3) |
O2—C16 | 1.236 (3) | C13—H13 | 0.9300 |
O3—C16 | 1.278 (3) | C14—H14 | 0.9300 |
C1—C6 | 1.419 (3) | C15—C16 | 1.507 (3) |
C1—C2 | 1.420 (3) | C15—H15A | 0.9700 |
C2—C3 | 1.362 (4) | C15—H15B | 0.9700 |
C2—H2 | 0.9300 | C17—H17 | 0.9300 |
C3—C4 | 1.393 (4) | C18—C19 | 1.344 (3) |
C3—H3 | 0.9300 | C18—H18 | 0.9300 |
C4—C5 | 1.360 (3) | C19—H19 | 0.9300 |
C4—H4 | 0.9300 | O1W—H1W | 0.8709 |
C5—C6 | 1.412 (3) | O1W—H2W1 | 0.8180 |
C5—H5 | 0.9300 | O1W—H2W2 | 0.8325 |
O1—Cu1—O3 | 172.18 (7) | C9—C8—H8 | 106.6 |
O1—Cu1—N1 | 93.45 (7) | C15—C8—H8 | 106.6 |
O3—Cu1—N1 | 92.47 (7) | C10—C9—C14 | 117.2 (2) |
O1—Cu1—N2 | 87.61 (7) | C10—C9—C8 | 120.8 (2) |
O3—Cu1—N2 | 86.66 (7) | C14—C9—C8 | 121.8 (2) |
N1—Cu1—N2 | 177.75 (8) | C11—C10—C9 | 121.9 (2) |
C7—N1—C8 | 115.30 (18) | C11—C10—H10 | 119.1 |
C7—N1—Cu1 | 123.22 (15) | C9—C10—H10 | 119.1 |
C8—N1—Cu1 | 121.16 (14) | C12—C11—C10 | 119.2 (2) |
C17—N2—C19 | 105.0 (2) | C12—C11—H11 | 120.4 |
C17—N2—Cu1 | 127.44 (16) | C10—C11—H11 | 120.4 |
C19—N2—Cu1 | 127.53 (16) | C11—C12—C13 | 120.8 (2) |
C17—N3—C18 | 107.1 (2) | C11—C12—Cl1 | 119.5 (2) |
C17—N3—H3A | 126.5 | C13—C12—Cl1 | 119.6 (2) |
C18—N3—H3A | 126.5 | C12—C13—C14 | 119.4 (2) |
C1—O1—Cu1 | 129.47 (15) | C12—C13—H13 | 120.3 |
C16—O3—Cu1 | 128.07 (16) | C14—C13—H13 | 120.3 |
O1—C1—C6 | 123.5 (2) | C13—C14—C9 | 121.5 (2) |
O1—C1—C2 | 119.3 (2) | C13—C14—H14 | 119.2 |
C6—C1—C2 | 117.2 (2) | C9—C14—H14 | 119.2 |
C3—C2—C1 | 121.2 (2) | C16—C15—C8 | 114.26 (19) |
C3—C2—H2 | 119.4 | C16—C15—H15A | 108.7 |
C1—C2—H2 | 119.4 | C8—C15—H15A | 108.7 |
C2—C3—C4 | 121.5 (2) | C16—C15—H15B | 108.7 |
C2—C3—H3 | 119.2 | C8—C15—H15B | 108.7 |
C4—C3—H3 | 119.2 | H15A—C15—H15B | 107.6 |
C5—C4—C3 | 118.9 (2) | O2—C16—O3 | 122.0 (2) |
C5—C4—H4 | 120.5 | O2—C16—C15 | 119.9 (2) |
C3—C4—H4 | 120.5 | O3—C16—C15 | 118.1 (2) |
C4—C5—C6 | 121.7 (2) | N2—C17—N3 | 111.7 (2) |
C4—C5—H5 | 119.2 | N2—C17—H17 | 124.1 |
C6—C5—H5 | 119.2 | N3—C17—H17 | 124.1 |
C5—C6—C1 | 119.5 (2) | C19—C18—N3 | 106.9 (2) |
C5—C6—C7 | 118.2 (2) | C19—C18—H18 | 126.6 |
C1—C6—C7 | 122.2 (2) | N3—C18—H18 | 126.6 |
N1—C7—C6 | 128.1 (2) | C18—C19—N2 | 109.3 (2) |
N1—C7—H7 | 115.9 | C18—C19—H19 | 125.4 |
C6—C7—H7 | 115.9 | N2—C19—H19 | 125.4 |
N1—C8—C9 | 112.78 (18) | H1W—O1W—H2W1 | 119.3 |
N1—C8—C15 | 109.03 (17) | H1W—O1W—H2W2 | 115.1 |
C9—C8—C15 | 114.66 (19) | H2W1—O1W—H2W2 | 106.8 |
N1—C8—H8 | 106.6 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O2i | 0.87 | 1.98 | 2.799 (3) | 156 |
O1W—H2W1···O1Wii | 0.82 | 2.01 | 2.826 (4) | 172 |
O1W—H2W2···O1Wiii | 0.83 | 2.02 | 2.822 (5) | 163 |
N3—H3A···O2iv | 0.86 | 1.90 | 2.758 (3) | 172 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z; (ii) −x+1, −y+2, −z; (iii) −x+1, −y+1, −z; (iv) −x+1/2, −y+5/2, −z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C16H12ClNO3)(C3H4N2)]·H2O |
Mr | 451.35 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 296 |
a, b, c (Å) | 23.884 (1), 4.944 (1), 32.008 (1) |
β (°) | 96.88 (1) |
V (Å3) | 3752.4 (8) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.34 |
Crystal size (mm) | 0.20 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2003) |
Tmin, Tmax | 0.776, 0.825 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18085, 4310, 3298 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.087, 1.04 |
No. of reflections | 4310 |
No. of parameters | 253 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.30 |
Computer programs: SMART (Bruker, 2003), SAINT (Bruker, 2003), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O2i | 0.87 | 1.98 | 2.799 (3) | 155.8 |
O1W—H2W1···O1Wii | 0.82 | 2.01 | 2.826 (4) | 172.3 |
O1W—H2W2···O1Wiii | 0.83 | 2.02 | 2.822 (5) | 163.2 |
N3—H3A···O2iv | 0.86 | 1.90 | 2.758 (3) | 171.8 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z; (ii) −x+1, −y+2, −z; (iii) −x+1, −y+1, −z; (iv) −x+1/2, −y+5/2, −z. |
Acknowledgements
The authors thank the Natural Science Foundation of Zhejiang Province, China (No. Y4080342) and the Science Foundation of Zhejiang Sci-Tech University (No. 0813622-Y) for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Transition metal complexes of salicylaldehyde-peptides and salicylaldehyde-amino acid Schiff base are non-enzymatic models for pyridoxal-amino acid systems, which are of considerable importance as key intermediates in many metabolic reactions of amino acids catalyzed by enzymes (Zabinski et al., 2001; Wetmore et al., 2001; Bkouche-Waksman et al.,1988). Considerable effort has been devoted to the preparation, structural characterization, appropriate spectroscopy and magnetic studies of Schiff-base complexes derived from salicylaldehyde and amino acids and reduced salicylidene amino acid (Ganguly et al., 2008), but little attention has been given to Schiff base derived from β-amino acid (Vančo et al., 2008). Herein, we report the structure study of [Cu(L)(C3H4N2)]. H2O (H2L= Schiff bases derived from glycylglycine and salicylaldehyde, C16H14NO3Cl).
The complex crystallizes in the monoclinic space group C2/c. The title molecule,is characterized by a square-planar CuII coordination with the deprotonated tridentate Schiff base dianion and one imidazole molecule in the basal plane (Fig. 1). The Cu1—N1 bond distance is 1.958 Å. The two Cu—O bonds are 1.889(Cu1—O1) and 1.950 Å (Cu1—O3). The fourth position occupied by one N atom from the imidazole ligand, with bond length of 1.980 Å (Cu1—N2). The phenyl ring [C1—C6] and the ring of C1, C6, C7, N1, O1, Cu1 chelate ring are almost coplanar with a small dihedral angle of 1.8o. Hydrogen bond between the coordinated imidazole molecule and the carboxyl oxygen atom of an adjacent, symmetry related CuL unit leads to the formation of a [CuL(C3H4N2)]2 dimer. Hydrogen bond between water molecule and CuL unit further link the dimers into two-dimension layers (Fig. 2).