organic compounds
Swietenolide diacetate from the seeds of Swietenia macrophylla
aInstitute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The title compound, C31H38O10 [systematic name: (αR,4R,4aR,6aS,7R,8S,10R,11S)-methyl α,10-diacetoxy-4-(3-furyl)-4a,7,9,9-tetramethyl-2,13-dioxo-1,4,4a,5,6,6a,7,8,9,10,11,12-dodecahydro-7,11-methano-2H-cycloocta[f][2]benzopyran-8-acetate], was isolated from the seeds of Swietenia macrophylla. The molecule contains four six-membered rings connected together in the shape of a bowl; one of the inner rings adopts a twisted chair conformation owing to the carbon–carbon double bond. The furyl substitutent is connected to an outer ring, and it points away from the bowl cavity.
Related literature
For the isolation, spectroscopic characterization and et al. (1976); Connolly & Labbe (1980); Connolly et al. (1965); Govindachari et al. (1999); Kadota, Marpaung et al. (1990); Kadota, Yanagawa et al. (1990); Mootoo et al. (1999); Narender et al. (2008); Schefer et al. (2006); Taylor & Taylor (1983); Yuan et al. (2010).
of the title compound, see: ChanExperimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810017733/bt5263sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810017733/bt5263Isup2.hkl
Swietenolide diacetate was isloated from the seeds of Swietenia macrophylla by using a reported procedure (Chan et al., 1976).
The finely ground seeds (600 g) were soaked in ethanol at room temperature for three days. The mixture was filtered and the sovlent evaporated to give a dark yellow crude material (70 g). A portion (40 g) was successively extracted with n-hexane, ethyl acetate and water to give an n-hexane-insoluble residue. The residue was partitioned between ethyl acetate-water (1:1) to give an ethyl acetate-soluble fraction (30 g, 80%).
This fraction (3 g) was subjected to
on silica gel (70-230 mesh, 300 g), with initial elution by n-hexane, followed by increasing proportions of chloroform. Eleven fractions were obtained. The fourth fraction (2 g) was further subjected to (70-230 mesh,200 g), initially eluting with n-hexane and later with acetone to give twelve fractions.The eighth fraction (600 mg) was dissolved in methanol and kept in a refrigerator. A white solid was obtained after two days, and a second crop was obtained after another two days. Recrystallization of the first crop from chloroform yielded colorless crystals of the title compound (yield 15 mg).
Carbon-bound H-atoms were placed in calculated positions (C—H 0.93 to 0.98 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2 to 1.5Ueq(C). The was fixed to be zero. 2976 Friedel pairs were merged.Sweietenia macrophylla is a large mahogany tree growing in the rainforests of Malaysia. The extracts of the seeds contain
saponins and that are commecialized in local herbal products. The isolation of the title compound (Scheme I, Fig. 1) has been reported a long time ago. The present analysis confirms the spectroscopic structure determination.For the isolation and spectroscopic characterization of the title compound, see: Chan et al. (1976); Connolly & Labbe (1980); Connolly et al. (1965); Govindachari et al. (1999); Kadota, Marpaung et al. (1990); Kadota, Yanagawa et al. (1990); Mootoo et al. (1999); Narender et al. (2008); Schefer et al. (2006); Taylor & Taylor (1983); Yuan et al. (2010).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Anisotropic displacement ellipsoid plot (Barbour, 2001) of C31H38O10 at the 50% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C31H38O10 | F(000) = 1216 |
Mr = 570.61 | Dx = 1.291 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 4600 reflections |
a = 12.5889 (11) Å | θ = 2.2–21.7° |
b = 13.7109 (12) Å | µ = 0.10 mm−1 |
c = 17.0045 (14) Å | T = 293 K |
V = 2935.1 (4) Å3 | Prism, colorless |
Z = 4 | 0.35 × 0.15 × 0.10 mm |
Bruker SMART APEX diffractometer | 2491 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.077 |
Graphite monochromator | θmax = 27.5°, θmin = 1.9° |
ω scans | h = −14→16 |
28065 measured reflections | k = −17→17 |
3771 independent reflections | l = −21→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.127 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0642P)2 + 0.2454P] where P = (Fo2 + 2Fc2)/3 |
3771 reflections | (Δ/σ)max = 0.001 |
377 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.13 e Å−3 |
C31H38O10 | V = 2935.1 (4) Å3 |
Mr = 570.61 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 12.5889 (11) Å | µ = 0.10 mm−1 |
b = 13.7109 (12) Å | T = 293 K |
c = 17.0045 (14) Å | 0.35 × 0.15 × 0.10 mm |
Bruker SMART APEX diffractometer | 2491 reflections with I > 2σ(I) |
28065 measured reflections | Rint = 0.077 |
3771 independent reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.127 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.16 e Å−3 |
3771 reflections | Δρmin = −0.13 e Å−3 |
377 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.6572 (2) | 0.3236 (2) | −0.20580 (14) | 0.0747 (7) | |
O2 | 0.7345 (2) | 0.35757 (17) | 0.04692 (14) | 0.0651 (6) | |
O3 | 0.7606 (3) | 0.4265 (2) | 0.16075 (17) | 0.0924 (9) | |
O4 | 0.9749 (2) | −0.1523 (2) | 0.17405 (16) | 0.0828 (8) | |
O5 | 0.55375 (19) | −0.11379 (15) | −0.08732 (13) | 0.0571 (6) | |
O6 | 0.61162 (19) | 0.03581 (15) | −0.06055 (15) | 0.0622 (6) | |
O7 | 0.72148 (19) | −0.20206 (14) | −0.03800 (12) | 0.0521 (5) | |
O8 | 0.7631 (3) | −0.19051 (19) | −0.16536 (15) | 0.0807 (8) | |
O9 | 0.6687 (2) | 0.0434 (2) | 0.19007 (13) | 0.0720 (7) | |
O10 | 0.5727 (4) | 0.0137 (4) | 0.2958 (3) | 0.169 (2) | |
C1 | 0.6620 (3) | 0.2682 (3) | −0.13924 (19) | 0.0620 (9) | |
H1 | 0.6269 | 0.2091 | −0.1325 | 0.074* | |
C2 | 0.7183 (4) | 0.4023 (3) | −0.1918 (2) | 0.0801 (12) | |
H2 | 0.7296 | 0.4527 | −0.2274 | 0.096* | |
C3 | 0.7605 (4) | 0.3985 (3) | −0.1201 (2) | 0.0729 (11) | |
H3 | 0.8053 | 0.4445 | −0.0975 | 0.087* | |
C4 | 0.7242 (3) | 0.3105 (2) | −0.08472 (19) | 0.0520 (8) | |
C5 | 0.7473 (3) | 0.2725 (2) | −0.00418 (18) | 0.0491 (7) | |
H5 | 0.6923 | 0.2248 | 0.0095 | 0.059* | |
C6 | 0.7706 (3) | 0.3546 (3) | 0.1211 (2) | 0.0622 (9) | |
C7 | 0.8189 (4) | 0.2635 (3) | 0.1517 (2) | 0.0704 (11) | |
H7A | 0.7672 | 0.2321 | 0.1856 | 0.084* | |
H7B | 0.8790 | 0.2814 | 0.1844 | 0.084* | |
C8 | 0.8569 (3) | 0.1887 (2) | 0.09253 (17) | 0.0486 (7) | |
C9 | 0.8563 (2) | 0.2247 (2) | 0.00792 (16) | 0.0431 (7) | |
C10 | 0.9466 (3) | 0.2977 (2) | −0.0049 (2) | 0.0582 (8) | |
H10A | 1.0136 | 0.2651 | 0.0011 | 0.087* | |
H10B | 0.9412 | 0.3493 | 0.0330 | 0.087* | |
H10C | 0.9416 | 0.3244 | −0.0570 | 0.087* | |
C11 | 0.8891 (3) | 0.0997 (2) | 0.11439 (17) | 0.0481 (7) | |
C12 | 0.9384 (2) | 0.0273 (2) | 0.05864 (17) | 0.0485 (7) | |
H12 | 1.0107 | 0.0171 | 0.0784 | 0.058* | |
C13 | 0.9526 (3) | 0.0679 (2) | −0.02434 (17) | 0.0510 (7) | |
H13A | 1.0207 | 0.1009 | −0.0273 | 0.061* | |
H13B | 0.9543 | 0.0140 | −0.0613 | 0.061* | |
C14 | 0.8658 (2) | 0.1386 (2) | −0.04903 (16) | 0.0455 (7) | |
H14A | 0.7985 | 0.1043 | −0.0512 | 0.055* | |
H14B | 0.8812 | 0.1630 | −0.1013 | 0.055* | |
C15 | 0.8823 (2) | −0.0758 (2) | 0.06588 (17) | 0.0490 (7) | |
C16 | 0.9398 (3) | −0.1515 (3) | 0.0156 (2) | 0.0609 (9) | |
H16A | 0.9102 | −0.2149 | 0.0254 | 0.091* | |
H16B | 1.0140 | −0.1518 | 0.0287 | 0.091* | |
H16C | 0.9315 | −0.1354 | −0.0390 | 0.091* | |
C17 | 0.7588 (2) | −0.0670 (2) | 0.05172 (17) | 0.0438 (7) | |
H17 | 0.7446 | 0.0033 | 0.0537 | 0.053* | |
C18 | 0.7268 (3) | −0.09720 (19) | −0.03206 (16) | 0.0432 (7) | |
H18 | 0.7836 | −0.0755 | −0.0673 | 0.052* | |
C19 | 0.6247 (3) | −0.0503 (2) | −0.06065 (16) | 0.0443 (7) | |
C20 | 0.4543 (3) | −0.0743 (3) | −0.1149 (2) | 0.0680 (10) | |
H20A | 0.4184 | −0.1222 | −0.1464 | 0.102* | |
H20B | 0.4677 | −0.0172 | −0.1460 | 0.102* | |
H20C | 0.4107 | −0.0572 | −0.0707 | 0.102* | |
C21 | 0.7431 (3) | −0.2402 (2) | −0.1093 (2) | 0.0565 (8) | |
C22 | 0.7397 (4) | −0.3485 (2) | −0.1083 (3) | 0.0834 (13) | |
H22A | 0.8030 | −0.3738 | −0.1322 | 0.125* | |
H22B | 0.6787 | −0.3706 | −0.1371 | 0.125* | |
H22C | 0.7351 | −0.3709 | −0.0549 | 0.125* | |
C23 | 0.6916 (3) | −0.1102 (3) | 0.12000 (18) | 0.0590 (9) | |
C24 | 0.5717 (3) | −0.1013 (3) | 0.1041 (2) | 0.0760 (11) | |
H24A | 0.5331 | −0.1158 | 0.1513 | 0.114* | |
H24B | 0.5517 | −0.1465 | 0.0636 | 0.114* | |
H24C | 0.5556 | −0.0361 | 0.0874 | 0.114* | |
C25 | 0.7149 (4) | −0.2193 (3) | 0.1370 (2) | 0.0815 (13) | |
H25A | 0.7901 | −0.2286 | 0.1426 | 0.122* | |
H25B | 0.6893 | −0.2584 | 0.0941 | 0.122* | |
H25C | 0.6797 | −0.2385 | 0.1846 | 0.122* | |
C26 | 0.7198 (3) | −0.0507 (3) | 0.19481 (19) | 0.0641 (9) | |
H26 | 0.6901 | −0.0852 | 0.2402 | 0.077* | |
C27 | 0.8403 (3) | −0.0385 (3) | 0.20878 (18) | 0.0599 (9) | |
H27 | 0.8563 | −0.0606 | 0.2623 | 0.072* | |
C28 | 0.8853 (3) | 0.0659 (3) | 0.19881 (18) | 0.0620 (9) | |
H28A | 0.8418 | 0.1109 | 0.2288 | 0.074* | |
H28B | 0.9566 | 0.0679 | 0.2205 | 0.074* | |
C29 | 0.9034 (3) | −0.0992 (3) | 0.1525 (2) | 0.0599 (9) | |
C30 | 0.5932 (4) | 0.0658 (5) | 0.2431 (3) | 0.0993 (16) | |
C31 | 0.5422 (5) | 0.1596 (5) | 0.2259 (3) | 0.135 (3) | |
H31A | 0.4720 | 0.1484 | 0.2058 | 0.203* | |
H31B | 0.5833 | 0.1943 | 0.1875 | 0.203* | |
H31C | 0.5379 | 0.1976 | 0.2733 | 0.203* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0871 (19) | 0.0801 (18) | 0.0570 (15) | 0.0094 (16) | −0.0090 (14) | −0.0018 (13) |
O2 | 0.0688 (15) | 0.0690 (14) | 0.0576 (14) | 0.0173 (13) | −0.0014 (12) | −0.0152 (12) |
O3 | 0.123 (2) | 0.0782 (17) | 0.0757 (18) | 0.0140 (19) | 0.0052 (17) | −0.0303 (15) |
O4 | 0.0820 (18) | 0.0923 (19) | 0.0742 (17) | 0.0214 (17) | −0.0234 (15) | 0.0242 (16) |
O5 | 0.0546 (13) | 0.0524 (12) | 0.0643 (14) | −0.0015 (11) | −0.0160 (12) | −0.0047 (10) |
O6 | 0.0572 (14) | 0.0449 (12) | 0.0844 (16) | 0.0046 (10) | −0.0142 (13) | 0.0017 (11) |
O7 | 0.0649 (14) | 0.0394 (10) | 0.0521 (12) | 0.0058 (10) | −0.0030 (11) | 0.0013 (9) |
O8 | 0.119 (2) | 0.0714 (15) | 0.0516 (15) | 0.0022 (17) | 0.0051 (15) | −0.0070 (13) |
O9 | 0.0713 (16) | 0.103 (2) | 0.0417 (12) | 0.0149 (15) | 0.0016 (12) | −0.0055 (12) |
O10 | 0.176 (5) | 0.226 (5) | 0.103 (3) | 0.026 (4) | 0.082 (3) | 0.017 (3) |
C1 | 0.070 (2) | 0.064 (2) | 0.0519 (19) | −0.0011 (19) | −0.0007 (18) | −0.0028 (17) |
C2 | 0.098 (3) | 0.065 (2) | 0.077 (3) | 0.011 (2) | −0.005 (3) | 0.014 (2) |
C3 | 0.093 (3) | 0.0507 (19) | 0.075 (3) | 0.004 (2) | −0.019 (2) | 0.0056 (17) |
C4 | 0.0514 (19) | 0.0491 (17) | 0.0555 (19) | 0.0085 (15) | −0.0043 (16) | −0.0057 (14) |
C5 | 0.0475 (19) | 0.0506 (17) | 0.0493 (17) | −0.0008 (15) | 0.0021 (14) | −0.0059 (14) |
C6 | 0.067 (2) | 0.066 (2) | 0.054 (2) | −0.0016 (19) | 0.0086 (18) | −0.0122 (17) |
C7 | 0.099 (3) | 0.066 (2) | 0.0456 (18) | 0.001 (2) | 0.0063 (19) | −0.0097 (16) |
C8 | 0.0516 (18) | 0.0564 (18) | 0.0377 (15) | −0.0057 (15) | 0.0005 (14) | −0.0047 (14) |
C9 | 0.0406 (16) | 0.0487 (16) | 0.0400 (15) | −0.0035 (13) | 0.0003 (13) | −0.0020 (13) |
C10 | 0.0514 (19) | 0.063 (2) | 0.060 (2) | −0.0124 (17) | −0.0019 (17) | 0.0026 (17) |
C11 | 0.0483 (18) | 0.0587 (18) | 0.0374 (15) | −0.0050 (16) | −0.0054 (14) | 0.0009 (13) |
C12 | 0.0408 (16) | 0.0629 (18) | 0.0419 (15) | 0.0054 (15) | −0.0063 (15) | 0.0020 (15) |
C13 | 0.0502 (18) | 0.0547 (17) | 0.0481 (17) | 0.0027 (16) | 0.0063 (15) | 0.0004 (14) |
C14 | 0.0504 (17) | 0.0508 (16) | 0.0353 (13) | −0.0019 (14) | 0.0025 (14) | 0.0018 (13) |
C15 | 0.0468 (17) | 0.0568 (17) | 0.0435 (16) | 0.0072 (15) | −0.0059 (14) | 0.0059 (14) |
C16 | 0.058 (2) | 0.0603 (19) | 0.064 (2) | 0.0185 (18) | −0.0057 (18) | 0.0014 (17) |
C17 | 0.0451 (17) | 0.0465 (15) | 0.0397 (14) | 0.0014 (14) | −0.0031 (13) | 0.0044 (13) |
C18 | 0.0523 (17) | 0.0366 (14) | 0.0407 (15) | 0.0025 (14) | −0.0043 (14) | 0.0012 (12) |
C19 | 0.0543 (18) | 0.0414 (16) | 0.0372 (14) | −0.0011 (14) | −0.0023 (14) | 0.0008 (12) |
C20 | 0.055 (2) | 0.080 (2) | 0.069 (2) | 0.002 (2) | −0.0195 (19) | −0.0008 (19) |
C21 | 0.056 (2) | 0.0523 (18) | 0.061 (2) | 0.0036 (17) | −0.0063 (17) | −0.0084 (16) |
C22 | 0.092 (3) | 0.052 (2) | 0.106 (3) | 0.009 (2) | 0.005 (3) | −0.022 (2) |
C23 | 0.064 (2) | 0.070 (2) | 0.0426 (17) | −0.0084 (18) | −0.0010 (16) | 0.0080 (15) |
C24 | 0.059 (2) | 0.116 (3) | 0.053 (2) | −0.016 (2) | 0.0049 (18) | 0.010 (2) |
C25 | 0.096 (3) | 0.081 (3) | 0.067 (2) | −0.022 (2) | −0.007 (2) | 0.029 (2) |
C26 | 0.067 (2) | 0.086 (2) | 0.0386 (17) | −0.005 (2) | 0.0029 (17) | 0.0158 (16) |
C27 | 0.070 (2) | 0.076 (2) | 0.0341 (15) | 0.0009 (19) | −0.0117 (16) | 0.0160 (15) |
C28 | 0.072 (2) | 0.075 (2) | 0.0385 (16) | 0.000 (2) | −0.0092 (16) | 0.0015 (16) |
C29 | 0.061 (2) | 0.063 (2) | 0.056 (2) | 0.0001 (18) | −0.0147 (17) | 0.0156 (17) |
C30 | 0.087 (3) | 0.162 (5) | 0.049 (2) | 0.010 (4) | 0.008 (2) | −0.016 (3) |
C31 | 0.100 (4) | 0.208 (7) | 0.099 (4) | 0.070 (5) | −0.027 (3) | −0.056 (4) |
O1—C2 | 1.347 (5) | C13—H13B | 0.9700 |
O1—C1 | 1.364 (4) | C14—H14A | 0.9700 |
O2—C6 | 1.342 (4) | C14—H14B | 0.9700 |
O2—C5 | 1.463 (4) | C15—C16 | 1.528 (5) |
O3—C6 | 1.200 (4) | C15—C29 | 1.531 (5) |
O4—C29 | 1.214 (4) | C15—C17 | 1.578 (4) |
O5—C19 | 1.327 (3) | C16—H16A | 0.9600 |
O5—C20 | 1.442 (4) | C16—H16B | 0.9600 |
O6—C19 | 1.193 (3) | C16—H16C | 0.9600 |
O7—C21 | 1.348 (4) | C17—C18 | 1.538 (4) |
O7—C18 | 1.443 (3) | C17—C23 | 1.554 (4) |
O8—C21 | 1.198 (4) | C17—H17 | 0.9800 |
O9—C30 | 1.345 (5) | C18—C19 | 1.517 (4) |
O9—C26 | 1.445 (5) | C18—H18 | 0.9800 |
O10—C30 | 1.175 (7) | C20—H20A | 0.9600 |
C1—C4 | 1.345 (5) | C20—H20B | 0.9600 |
C1—H1 | 0.9300 | C20—H20C | 0.9600 |
C2—C3 | 1.330 (5) | C21—C22 | 1.486 (5) |
C2—H2 | 0.9300 | C22—H22A | 0.9600 |
C3—C4 | 1.423 (5) | C22—H22B | 0.9600 |
C3—H3 | 0.9300 | C22—H22C | 0.9600 |
C4—C5 | 1.494 (5) | C23—C24 | 1.538 (5) |
C5—C9 | 1.535 (4) | C23—C26 | 1.552 (5) |
C5—H5 | 0.9800 | C23—C25 | 1.552 (5) |
C6—C7 | 1.484 (5) | C24—H24A | 0.9600 |
C7—C8 | 1.514 (4) | C24—H24B | 0.9600 |
C7—H7A | 0.9700 | C24—H24C | 0.9600 |
C7—H7B | 0.9700 | C25—H25A | 0.9600 |
C8—C11 | 1.339 (4) | C25—H25B | 0.9600 |
C8—C9 | 1.521 (4) | C25—H25C | 0.9600 |
C9—C10 | 1.530 (4) | C26—C27 | 1.544 (5) |
C9—C14 | 1.532 (4) | C26—H26 | 0.9800 |
C10—H10A | 0.9600 | C27—C29 | 1.497 (5) |
C10—H10B | 0.9600 | C27—C28 | 1.549 (5) |
C10—H10C | 0.9600 | C27—H27 | 0.9800 |
C11—C12 | 1.506 (4) | C28—H28A | 0.9700 |
C11—C28 | 1.509 (4) | C28—H28B | 0.9700 |
C12—C13 | 1.528 (4) | C30—C31 | 1.467 (8) |
C12—C15 | 1.585 (4) | C31—H31A | 0.9600 |
C12—H12 | 0.9800 | C31—H31B | 0.9600 |
C13—C14 | 1.520 (4) | C31—H31C | 0.9600 |
C13—H13A | 0.9700 | ||
C2—O1—C1 | 105.9 (3) | H16B—C16—H16C | 109.5 |
C6—O2—C5 | 119.8 (3) | C18—C17—C23 | 116.6 (3) |
C19—O5—C20 | 116.7 (2) | C18—C17—C15 | 112.3 (2) |
C21—O7—C18 | 116.1 (2) | C23—C17—C15 | 113.1 (2) |
C30—O9—C26 | 118.8 (4) | C18—C17—H17 | 104.5 |
C4—C1—O1 | 111.0 (3) | C23—C17—H17 | 104.5 |
C4—C1—H1 | 124.5 | C15—C17—H17 | 104.5 |
O1—C1—H1 | 124.5 | O7—C18—C19 | 111.1 (2) |
C3—C2—O1 | 111.0 (4) | O7—C18—C17 | 110.2 (2) |
C3—C2—H2 | 124.5 | C19—C18—C17 | 113.9 (2) |
O1—C2—H2 | 124.5 | O7—C18—H18 | 107.1 |
C2—C3—C4 | 107.0 (4) | C19—C18—H18 | 107.1 |
C2—C3—H3 | 126.5 | C17—C18—H18 | 107.1 |
C4—C3—H3 | 126.5 | O6—C19—O5 | 123.8 (3) |
C1—C4—C3 | 105.1 (3) | O6—C19—C18 | 122.4 (3) |
C1—C4—C5 | 126.5 (3) | O5—C19—C18 | 113.7 (2) |
C3—C4—C5 | 128.4 (3) | O5—C20—H20A | 109.5 |
O2—C5—C4 | 104.2 (2) | O5—C20—H20B | 109.5 |
O2—C5—C9 | 111.0 (2) | H20A—C20—H20B | 109.5 |
C4—C5—C9 | 116.5 (3) | O5—C20—H20C | 109.5 |
O2—C5—H5 | 108.3 | H20A—C20—H20C | 109.5 |
C4—C5—H5 | 108.3 | H20B—C20—H20C | 109.5 |
C9—C5—H5 | 108.3 | O8—C21—O7 | 122.5 (3) |
O3—C6—O2 | 117.9 (3) | O8—C21—C22 | 125.7 (3) |
O3—C6—C7 | 122.5 (3) | O7—C21—C22 | 111.8 (3) |
O2—C6—C7 | 119.6 (3) | C21—C22—H22A | 109.5 |
C6—C7—C8 | 117.8 (3) | C21—C22—H22B | 109.5 |
C6—C7—H7A | 107.8 | H22A—C22—H22B | 109.5 |
C8—C7—H7A | 107.8 | C21—C22—H22C | 109.5 |
C6—C7—H7B | 107.8 | H22A—C22—H22C | 109.5 |
C8—C7—H7B | 107.8 | H22B—C22—H22C | 109.5 |
H7A—C7—H7B | 107.2 | C24—C23—C26 | 109.1 (3) |
C11—C8—C7 | 121.9 (3) | C24—C23—C25 | 107.1 (3) |
C11—C8—C9 | 124.0 (3) | C26—C23—C25 | 108.1 (3) |
C7—C8—C9 | 114.0 (3) | C24—C23—C17 | 111.9 (3) |
C8—C9—C10 | 110.1 (2) | C26—C23—C17 | 106.7 (3) |
C8—C9—C14 | 110.3 (2) | C25—C23—C17 | 113.8 (3) |
C10—C9—C14 | 110.8 (2) | C23—C24—H24A | 109.5 |
C8—C9—C5 | 105.6 (2) | C23—C24—H24B | 109.5 |
C10—C9—C5 | 111.5 (2) | H24A—C24—H24B | 109.5 |
C14—C9—C5 | 108.3 (2) | C23—C24—H24C | 109.5 |
C9—C10—H10A | 109.5 | H24A—C24—H24C | 109.5 |
C9—C10—H10B | 109.5 | H24B—C24—H24C | 109.5 |
H10A—C10—H10B | 109.5 | C23—C25—H25A | 109.5 |
C9—C10—H10C | 109.5 | C23—C25—H25B | 109.5 |
H10A—C10—H10C | 109.5 | H25A—C25—H25B | 109.5 |
H10B—C10—H10C | 109.5 | C23—C25—H25C | 109.5 |
C8—C11—C12 | 123.4 (3) | H25A—C25—H25C | 109.5 |
C8—C11—C28 | 122.3 (3) | H25B—C25—H25C | 109.5 |
C12—C11—C28 | 114.2 (3) | O9—C26—C27 | 110.4 (3) |
C11—C12—C13 | 112.9 (3) | O9—C26—C23 | 108.8 (3) |
C11—C12—C15 | 110.8 (2) | C27—C26—C23 | 114.1 (3) |
C13—C12—C15 | 116.7 (3) | O9—C26—H26 | 107.8 |
C11—C12—H12 | 105.1 | C27—C26—H26 | 107.8 |
C13—C12—H12 | 105.1 | C23—C26—H26 | 107.8 |
C15—C12—H12 | 105.1 | C29—C27—C26 | 111.3 (3) |
C14—C13—C12 | 113.8 (3) | C29—C27—C28 | 104.4 (3) |
C14—C13—H13A | 108.8 | C26—C27—C28 | 116.3 (3) |
C12—C13—H13A | 108.8 | C29—C27—H27 | 108.2 |
C14—C13—H13B | 108.8 | C26—C27—H27 | 108.2 |
C12—C13—H13B | 108.8 | C28—C27—H27 | 108.2 |
H13A—C13—H13B | 107.7 | C11—C28—C27 | 113.5 (3) |
C13—C14—C9 | 111.9 (2) | C11—C28—H28A | 108.9 |
C13—C14—H14A | 109.2 | C27—C28—H28A | 108.9 |
C9—C14—H14A | 109.2 | C11—C28—H28B | 108.9 |
C13—C14—H14B | 109.2 | C27—C28—H28B | 108.9 |
C9—C14—H14B | 109.2 | H28A—C28—H28B | 107.7 |
H14A—C14—H14B | 107.9 | O4—C29—C27 | 122.3 (3) |
C16—C15—C29 | 108.3 (3) | O4—C29—C15 | 123.0 (3) |
C16—C15—C17 | 115.7 (3) | C27—C29—C15 | 114.0 (3) |
C29—C15—C17 | 109.6 (3) | O10—C30—O9 | 121.8 (6) |
C16—C15—C12 | 110.5 (3) | O10—C30—C31 | 126.1 (5) |
C29—C15—C12 | 100.6 (3) | O9—C30—C31 | 112.1 (5) |
C17—C15—C12 | 111.0 (2) | C30—C31—H31A | 109.5 |
C15—C16—H16A | 109.5 | C30—C31—H31B | 109.5 |
C15—C16—H16B | 109.5 | H31A—C31—H31B | 109.5 |
H16A—C16—H16B | 109.5 | C30—C31—H31C | 109.5 |
C15—C16—H16C | 109.5 | H31A—C31—H31C | 109.5 |
H16A—C16—H16C | 109.5 | H31B—C31—H31C | 109.5 |
C2—O1—C1—C4 | 0.0 (4) | C12—C15—C17—C18 | 100.0 (3) |
C1—O1—C2—C3 | 0.0 (5) | C16—C15—C17—C23 | 107.4 (3) |
O1—C2—C3—C4 | 0.0 (5) | C29—C15—C17—C23 | −15.4 (4) |
O1—C1—C4—C3 | 0.0 (4) | C12—C15—C17—C23 | −125.6 (3) |
O1—C1—C4—C5 | 179.0 (3) | C21—O7—C18—C19 | 82.4 (3) |
C2—C3—C4—C1 | 0.0 (4) | C21—O7—C18—C17 | −150.4 (3) |
C2—C3—C4—C5 | −179.0 (3) | C23—C17—C18—O7 | −52.8 (3) |
C6—O2—C5—C4 | −166.2 (3) | C15—C17—C18—O7 | 80.0 (3) |
C6—O2—C5—C9 | −40.0 (4) | C23—C17—C18—C19 | 72.9 (3) |
C1—C4—C5—O2 | −134.2 (3) | C15—C17—C18—C19 | −154.4 (2) |
C3—C4—C5—O2 | 44.6 (4) | C20—O5—C19—O6 | −2.2 (4) |
C1—C4—C5—C9 | 103.2 (4) | C20—O5—C19—C18 | 179.5 (3) |
C3—C4—C5—C9 | −78.0 (4) | O7—C18—C19—O6 | 179.6 (3) |
C5—O2—C6—O3 | 178.5 (3) | C17—C18—C19—O6 | 54.4 (4) |
C5—O2—C6—C7 | −2.7 (5) | O7—C18—C19—O5 | −2.1 (3) |
O3—C6—C7—C8 | −162.5 (4) | C17—C18—C19—O5 | −127.3 (3) |
O2—C6—C7—C8 | 18.8 (5) | C18—O7—C21—O8 | −1.8 (5) |
C6—C7—C8—C11 | −171.5 (3) | C18—O7—C21—C22 | 177.7 (3) |
C6—C7—C8—C9 | 9.4 (5) | C18—C17—C23—C24 | −47.1 (4) |
C11—C8—C9—C10 | −106.3 (3) | C15—C17—C23—C24 | −179.4 (3) |
C7—C8—C9—C10 | 72.8 (4) | C18—C17—C23—C26 | −166.3 (3) |
C11—C8—C9—C14 | 16.4 (4) | C15—C17—C23—C26 | 61.3 (4) |
C7—C8—C9—C14 | −164.5 (3) | C18—C17—C23—C25 | 74.5 (4) |
C11—C8—C9—C5 | 133.3 (3) | C15—C17—C23—C25 | −57.9 (4) |
C7—C8—C9—C5 | −47.7 (3) | C30—O9—C26—C27 | −119.0 (4) |
O2—C5—C9—C8 | 63.6 (3) | C30—O9—C26—C23 | 115.2 (4) |
C4—C5—C9—C8 | −177.4 (3) | C24—C23—C26—O9 | −45.9 (4) |
O2—C5—C9—C10 | −55.9 (3) | C25—C23—C26—O9 | −162.1 (3) |
C4—C5—C9—C10 | 63.0 (3) | C17—C23—C26—O9 | 75.1 (3) |
O2—C5—C9—C14 | −178.1 (2) | C24—C23—C26—C27 | −169.6 (3) |
C4—C5—C9—C14 | −59.2 (3) | C25—C23—C26—C27 | 74.2 (4) |
C7—C8—C11—C12 | −173.2 (3) | C17—C23—C26—C27 | −48.6 (4) |
C9—C8—C11—C12 | 5.9 (5) | O9—C26—C27—C29 | −130.9 (3) |
C7—C8—C11—C28 | 2.8 (5) | C23—C26—C27—C29 | −8.0 (4) |
C9—C8—C11—C28 | −178.1 (3) | O9—C26—C27—C28 | −11.4 (4) |
C8—C11—C12—C13 | 2.8 (4) | C23—C26—C27—C28 | 111.4 (4) |
C28—C11—C12—C13 | −173.5 (3) | C8—C11—C28—C27 | 135.0 (3) |
C8—C11—C12—C15 | −130.2 (3) | C12—C11—C28—C27 | −48.6 (4) |
C28—C11—C12—C15 | 53.5 (3) | C29—C27—C28—C11 | 51.4 (4) |
C11—C12—C13—C14 | −33.9 (4) | C26—C27—C28—C11 | −71.7 (4) |
C15—C12—C13—C14 | 96.2 (3) | C26—C27—C29—O4 | −130.9 (4) |
C12—C13—C14—C9 | 57.0 (3) | C28—C27—C29—O4 | 102.9 (4) |
C8—C9—C14—C13 | −46.3 (3) | C26—C27—C29—C15 | 58.6 (4) |
C10—C9—C14—C13 | 76.0 (3) | C28—C27—C29—C15 | −67.7 (4) |
C5—C9—C14—C13 | −161.5 (2) | C16—C15—C29—O4 | 17.0 (5) |
C11—C12—C15—C16 | −174.1 (2) | C17—C15—C29—O4 | 144.1 (3) |
C13—C12—C15—C16 | 54.8 (3) | C12—C15—C29—O4 | −98.9 (4) |
C11—C12—C15—C29 | −59.9 (3) | C16—C15—C29—C27 | −172.5 (3) |
C13—C12—C15—C29 | 169.0 (3) | C17—C15—C29—C27 | −45.4 (4) |
C11—C12—C15—C17 | 56.0 (3) | C12—C15—C29—C27 | 71.6 (3) |
C13—C12—C15—C17 | −75.1 (3) | C26—O9—C30—O10 | 4.9 (7) |
C16—C15—C17—C18 | −27.1 (4) | C26—O9—C30—C31 | −174.6 (4) |
C29—C15—C17—C18 | −149.8 (3) |
Experimental details
Crystal data | |
Chemical formula | C31H38O10 |
Mr | 570.61 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 12.5889 (11), 13.7109 (12), 17.0045 (14) |
V (Å3) | 2935.1 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.35 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 28065, 3771, 2491 |
Rint | 0.077 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.127, 1.02 |
No. of reflections | 3771 |
No. of parameters | 377 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.13 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
Acknowledgements
We thank the University of Malaya for supporting this study.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Sweietenia macrophylla is a large mahogany tree growing in the rainforests of Malaysia. The extracts of the seeds contain flavonoids, saponins and alkaloids that are commecialized in local herbal products. The isolation of the title compound (Scheme I, Fig. 1) has been reported a long time ago. The present crystal structure analysis confirms the spectroscopic structure determination.