organic compounds
1-Decylindoline-2,3-dione
aLaboratoire de Chimie Organique Hétérocyclique, Pôle de Compétences Pharmacochimie, Université Mohammed V-Agdal, BP 1014 Avenue Ibn Batout, Rabat, Morocco, bCNRST Division UATRS, Angle Allal Fassi/FAR, BP 8027 Hay Riad, Rabat, Morocco, and cDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
In the title N-alkyl isatin, C18H25NO2, the isatin moiety is almost planar (r.m.s. deviation = 0.03 Å). C—C—C—C torsion angles of the decyl substituent indicate an all-antiperiplanar conformation.
Related literature
For background to N-substituted isatins and their derivatives, see: Bouhfid et al. (2008). For the crystal structures of two N-alkyl isatins, see: see: Miehe et al. (2003); Naumov et al. (2002).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810018271/bt5274sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810018271/bt5274Isup2.hkl
To a solution of isatin (1 g, 6.8 mmol) dissolved in DMF(50 ml) was added 1-bromodecane (1.50 g, 6.8 mmol), potassium carbonate (1 g, 7.4 mmol) and a catalytic quantity of tetra-n-butylammonium bromide.The mixture was stirred for 48 h; the reaction was monitored by thin layer
The mixture was filtered and the solvent removed under vacuum. The solid that was obtained was recrystallized from ethanol to afford the title compound as orange crystals in 80% yield.H-atoms were placed in calculated positions (C–H 0.95–0.99 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2–1.5Ueq(C).N-Substituted isatins (Bouhfid et al., 2008) represent a large family of
reported to show a wide range of useful medicinal activities. These are readily synthesized by the reaction of isatin and an alkyl halide in the presence of a catalyst. The title decyl derivative (Scheme I, Fig. 1) has a particarly long hydrocarbon chain; the chain adopts a extended zigzag conformation.The crystal structures of only few N-substituted isatins have been reported; these have only short hydrocarbon chains, e.g., methyl isatin (Miehe et al., 2003) and ethyl isatin (Naumov et al., 2002).
For background to N-substituted isatins and their derivatives, see: Bouhfid et al. (2008). For the crystal structures of two N-alkyl isatins, see: see: Miehe et al. (2003); Naumov et al. (2002).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Anisotropic displacement ellipsoid plot (Barbour, 2001) of the title compound at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C18H25NO2 | F(000) = 624 |
Mr = 287.39 | Dx = 1.175 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7695 reflections |
a = 22.7208 (3) Å | θ = 2.6–30.8° |
b = 4.7189 (1) Å | µ = 0.08 mm−1 |
c = 15.8254 (1) Å | T = 200 K |
β = 106.827 (1)° | Prism, orange |
V = 1624.10 (4) Å3 | 0.27 × 0.18 × 0.15 mm |
Z = 4 |
Bruker X8 APEXII diffractometer | 3869 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.028 |
Graphite monochromator | θmax = 31.2°, θmin = 2.7° |
φ and ω scans | h = −31→33 |
24714 measured reflections | k = −6→6 |
5240 independent reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0928P)2 + 0.1263P] where P = (Fo2 + 2Fc2)/3 |
5240 reflections | (Δ/σ)max = 0.001 |
190 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C18H25NO2 | V = 1624.10 (4) Å3 |
Mr = 287.39 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 22.7208 (3) Å | µ = 0.08 mm−1 |
b = 4.7189 (1) Å | T = 200 K |
c = 15.8254 (1) Å | 0.27 × 0.18 × 0.15 mm |
β = 106.827 (1)° |
Bruker X8 APEXII diffractometer | 3869 reflections with I > 2σ(I) |
24714 measured reflections | Rint = 0.028 |
5240 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.29 e Å−3 |
5240 reflections | Δρmin = −0.20 e Å−3 |
190 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.45133 (4) | 1.1915 (2) | 0.42722 (6) | 0.0500 (2) | |
O2 | 0.35296 (4) | 0.7723 (2) | 0.35480 (5) | 0.0532 (3) | |
N1 | 0.34580 (4) | 0.78714 (18) | 0.49718 (5) | 0.03110 (19) | |
C1 | 0.37349 (4) | 0.94803 (19) | 0.57377 (6) | 0.02594 (19) | |
C2 | 0.36083 (4) | 0.9424 (2) | 0.65378 (6) | 0.0307 (2) | |
H2 | 0.3307 | 0.8180 | 0.6640 | 0.037* | |
C3 | 0.39391 (5) | 1.1265 (2) | 0.71908 (7) | 0.0344 (2) | |
H3 | 0.3859 | 1.1275 | 0.7748 | 0.041* | |
C4 | 0.43815 (5) | 1.3082 (2) | 0.70538 (7) | 0.0361 (2) | |
H4 | 0.4596 | 1.4322 | 0.7512 | 0.043* | |
C5 | 0.45126 (4) | 1.3101 (2) | 0.62509 (7) | 0.0334 (2) | |
H5 | 0.4820 | 1.4320 | 0.6155 | 0.040* | |
C6 | 0.41840 (4) | 1.1295 (2) | 0.55931 (6) | 0.0276 (2) | |
C7 | 0.42008 (4) | 1.0850 (2) | 0.46877 (6) | 0.0337 (2) | |
C8 | 0.36942 (5) | 0.8606 (2) | 0.42990 (7) | 0.0353 (2) | |
C9 | 0.29367 (4) | 0.5981 (2) | 0.48624 (8) | 0.0352 (2) | |
H9A | 0.2996 | 0.4841 | 0.5406 | 0.042* | |
H9B | 0.2918 | 0.4661 | 0.4369 | 0.042* | |
C10 | 0.23300 (4) | 0.7587 (2) | 0.46748 (8) | 0.0358 (2) | |
H10A | 0.2329 | 0.8711 | 0.5202 | 0.043* | |
H10B | 0.2299 | 0.8926 | 0.4182 | 0.043* | |
C11 | 0.17722 (5) | 0.5653 (2) | 0.44377 (8) | 0.0357 (2) | |
H11A | 0.1806 | 0.4294 | 0.4926 | 0.043* | |
H11B | 0.1769 | 0.4551 | 0.3904 | 0.043* | |
C12 | 0.11684 (4) | 0.7268 (2) | 0.42654 (8) | 0.0368 (2) | |
H12A | 0.1163 | 0.8268 | 0.4813 | 0.044* | |
H12B | 0.1151 | 0.8720 | 0.3807 | 0.044* | |
C13 | 0.05984 (4) | 0.5417 (2) | 0.39672 (8) | 0.0375 (2) | |
H13A | 0.0614 | 0.3963 | 0.4424 | 0.045* | |
H13B | 0.0601 | 0.4421 | 0.3418 | 0.045* | |
C14 | 0.00008 (4) | 0.7073 (2) | 0.38011 (8) | 0.0385 (2) | |
H14A | −0.0003 | 0.8047 | 0.4353 | 0.046* | |
H14B | −0.0011 | 0.8547 | 0.3352 | 0.046* | |
C15 | −0.05752 (5) | 0.5260 (3) | 0.34891 (8) | 0.0387 (2) | |
H15A | −0.0573 | 0.4288 | 0.2936 | 0.046* | |
H15B | −0.0565 | 0.3784 | 0.3938 | 0.046* | |
C16 | −0.11691 (5) | 0.6935 (3) | 0.33263 (8) | 0.0395 (3) | |
H16A | −0.1171 | 0.7898 | 0.3881 | 0.047* | |
H16B | −0.1177 | 0.8418 | 0.2881 | 0.047* | |
C17 | −0.17475 (5) | 0.5154 (3) | 0.30097 (8) | 0.0447 (3) | |
H17A | −0.1748 | 0.4204 | 0.2452 | 0.054* | |
H17B | −0.1739 | 0.3662 | 0.3453 | 0.054* | |
C18 | −0.23353 (5) | 0.6849 (3) | 0.28575 (10) | 0.0566 (4) | |
H18A | −0.2690 | 0.5581 | 0.2657 | 0.085* | |
H18B | −0.2353 | 0.8299 | 0.2407 | 0.085* | |
H18C | −0.2343 | 0.7764 | 0.3410 | 0.085* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0417 (5) | 0.0751 (6) | 0.0390 (4) | 0.0036 (4) | 0.0209 (4) | 0.0194 (4) |
O2 | 0.0543 (5) | 0.0716 (6) | 0.0319 (4) | 0.0113 (5) | 0.0098 (4) | −0.0109 (4) |
N1 | 0.0264 (4) | 0.0362 (4) | 0.0297 (4) | 0.0000 (3) | 0.0065 (3) | −0.0030 (3) |
C1 | 0.0214 (4) | 0.0288 (4) | 0.0270 (4) | 0.0035 (3) | 0.0061 (3) | 0.0038 (3) |
C2 | 0.0274 (4) | 0.0361 (5) | 0.0309 (5) | −0.0008 (4) | 0.0122 (4) | 0.0047 (4) |
C3 | 0.0352 (5) | 0.0422 (5) | 0.0269 (5) | 0.0028 (4) | 0.0106 (4) | 0.0015 (4) |
C4 | 0.0332 (5) | 0.0385 (5) | 0.0337 (5) | −0.0015 (4) | 0.0050 (4) | −0.0031 (4) |
C5 | 0.0262 (4) | 0.0347 (5) | 0.0378 (5) | −0.0025 (4) | 0.0072 (4) | 0.0055 (4) |
C6 | 0.0220 (4) | 0.0328 (5) | 0.0290 (4) | 0.0038 (3) | 0.0089 (3) | 0.0071 (3) |
C7 | 0.0277 (4) | 0.0452 (6) | 0.0298 (5) | 0.0099 (4) | 0.0107 (4) | 0.0108 (4) |
C8 | 0.0312 (5) | 0.0453 (6) | 0.0291 (5) | 0.0121 (4) | 0.0085 (4) | 0.0007 (4) |
C9 | 0.0259 (4) | 0.0311 (5) | 0.0447 (6) | 0.0003 (4) | 0.0040 (4) | −0.0051 (4) |
C10 | 0.0260 (5) | 0.0313 (5) | 0.0464 (6) | 0.0014 (4) | 0.0045 (4) | −0.0027 (4) |
C11 | 0.0260 (4) | 0.0335 (5) | 0.0442 (6) | 0.0002 (4) | 0.0047 (4) | −0.0039 (4) |
C12 | 0.0260 (5) | 0.0362 (5) | 0.0454 (6) | 0.0002 (4) | 0.0057 (4) | −0.0029 (4) |
C13 | 0.0257 (5) | 0.0385 (5) | 0.0457 (6) | −0.0002 (4) | 0.0064 (4) | −0.0040 (4) |
C14 | 0.0253 (5) | 0.0405 (6) | 0.0471 (6) | 0.0003 (4) | 0.0064 (4) | −0.0017 (5) |
C15 | 0.0264 (5) | 0.0429 (6) | 0.0447 (6) | −0.0003 (4) | 0.0068 (4) | −0.0052 (5) |
C16 | 0.0264 (5) | 0.0451 (6) | 0.0451 (6) | 0.0005 (4) | 0.0072 (4) | −0.0012 (5) |
C17 | 0.0295 (5) | 0.0528 (7) | 0.0494 (7) | −0.0040 (5) | 0.0076 (5) | −0.0083 (5) |
C18 | 0.0265 (5) | 0.0727 (9) | 0.0673 (9) | −0.0007 (6) | 0.0081 (5) | −0.0007 (7) |
O1—C7 | 1.2080 (12) | C11—H11A | 0.9900 |
O2—C8 | 1.2118 (13) | C11—H11B | 0.9900 |
N1—C8 | 1.3684 (13) | C12—C13 | 1.5196 (15) |
N1—C1 | 1.4142 (12) | C12—H12A | 0.9900 |
N1—C9 | 1.4525 (13) | C12—H12B | 0.9900 |
C1—C2 | 1.3774 (13) | C13—C14 | 1.5222 (14) |
C1—C6 | 1.4007 (13) | C13—H13A | 0.9900 |
C2—C3 | 1.3919 (15) | C13—H13B | 0.9900 |
C2—H2 | 0.9500 | C14—C15 | 1.5213 (14) |
C3—C4 | 1.3852 (15) | C14—H14A | 0.9900 |
C3—H3 | 0.9500 | C14—H14B | 0.9900 |
C4—C5 | 1.3865 (15) | C15—C16 | 1.5201 (15) |
C4—H4 | 0.9500 | C15—H15A | 0.9900 |
C5—C6 | 1.3846 (14) | C15—H15B | 0.9900 |
C5—H5 | 0.9500 | C16—C17 | 1.5173 (15) |
C6—C7 | 1.4596 (13) | C16—H16A | 0.9900 |
C7—C8 | 1.5540 (17) | C16—H16B | 0.9900 |
C9—C10 | 1.5248 (14) | C17—C18 | 1.5151 (17) |
C9—H9A | 0.9900 | C17—H17A | 0.9900 |
C9—H9B | 0.9900 | C17—H17B | 0.9900 |
C10—C11 | 1.5181 (14) | C18—H18A | 0.9800 |
C10—H10A | 0.9900 | C18—H18B | 0.9800 |
C10—H10B | 0.9900 | C18—H18C | 0.9800 |
C11—C12 | 1.5233 (14) | ||
C8—N1—C1 | 110.70 (8) | H11A—C11—H11B | 107.8 |
C8—N1—C9 | 123.56 (9) | C13—C12—C11 | 114.23 (9) |
C1—N1—C9 | 125.23 (8) | C13—C12—H12A | 108.7 |
C2—C1—C6 | 121.18 (9) | C11—C12—H12A | 108.7 |
C2—C1—N1 | 128.18 (9) | C13—C12—H12B | 108.7 |
C6—C1—N1 | 110.65 (8) | C11—C12—H12B | 108.7 |
C1—C2—C3 | 117.32 (9) | H12A—C12—H12B | 107.6 |
C1—C2—H2 | 121.3 | C12—C13—C14 | 113.32 (9) |
C3—C2—H2 | 121.3 | C12—C13—H13A | 108.9 |
C4—C3—C2 | 122.03 (9) | C14—C13—H13A | 108.9 |
C4—C3—H3 | 119.0 | C12—C13—H13B | 108.9 |
C2—C3—H3 | 119.0 | C14—C13—H13B | 108.9 |
C3—C4—C5 | 120.36 (10) | H13A—C13—H13B | 107.7 |
C3—C4—H4 | 119.8 | C15—C14—C13 | 114.06 (9) |
C5—C4—H4 | 119.8 | C15—C14—H14A | 108.7 |
C6—C5—C4 | 118.22 (9) | C13—C14—H14A | 108.7 |
C6—C5—H5 | 120.9 | C15—C14—H14B | 108.7 |
C4—C5—H5 | 120.9 | C13—C14—H14B | 108.7 |
C5—C6—C1 | 120.88 (9) | H14A—C14—H14B | 107.6 |
C5—C6—C7 | 131.68 (9) | C16—C15—C14 | 113.61 (9) |
C1—C6—C7 | 107.44 (9) | C16—C15—H15A | 108.8 |
O1—C7—C6 | 131.37 (11) | C14—C15—H15A | 108.8 |
O1—C7—C8 | 123.56 (10) | C16—C15—H15B | 108.8 |
C6—C7—C8 | 105.05 (8) | C14—C15—H15B | 108.8 |
O2—C8—N1 | 126.65 (11) | H15A—C15—H15B | 107.7 |
O2—C8—C7 | 127.25 (10) | C17—C16—C15 | 114.17 (10) |
N1—C8—C7 | 106.08 (8) | C17—C16—H16A | 108.7 |
N1—C9—C10 | 112.21 (8) | C15—C16—H16A | 108.7 |
N1—C9—H9A | 109.2 | C17—C16—H16B | 108.7 |
C10—C9—H9A | 109.2 | C15—C16—H16B | 108.7 |
N1—C9—H9B | 109.2 | H16A—C16—H16B | 107.6 |
C10—C9—H9B | 109.2 | C18—C17—C16 | 113.55 (11) |
H9A—C9—H9B | 107.9 | C18—C17—H17A | 108.9 |
C11—C10—C9 | 113.10 (8) | C16—C17—H17A | 108.9 |
C11—C10—H10A | 109.0 | C18—C17—H17B | 108.9 |
C9—C10—H10A | 109.0 | C16—C17—H17B | 108.9 |
C11—C10—H10B | 109.0 | H17A—C17—H17B | 107.7 |
C9—C10—H10B | 109.0 | C17—C18—H18A | 109.5 |
H10A—C10—H10B | 107.8 | C17—C18—H18B | 109.5 |
C10—C11—C12 | 112.81 (8) | H18A—C18—H18B | 109.5 |
C10—C11—H11A | 109.0 | C17—C18—H18C | 109.5 |
C12—C11—H11A | 109.0 | H18A—C18—H18C | 109.5 |
C10—C11—H11B | 109.0 | H18B—C18—H18C | 109.5 |
C12—C11—H11B | 109.0 | ||
C8—N1—C1—C2 | 177.81 (9) | C1—N1—C8—O2 | −175.80 (10) |
C9—N1—C1—C2 | 5.74 (15) | C9—N1—C8—O2 | −3.58 (17) |
C8—N1—C1—C6 | −1.83 (11) | C1—N1—C8—C7 | 2.68 (10) |
C9—N1—C1—C6 | −173.90 (9) | C9—N1—C8—C7 | 174.90 (8) |
C6—C1—C2—C3 | 0.75 (14) | O1—C7—C8—O2 | −3.09 (17) |
N1—C1—C2—C3 | −178.85 (9) | C6—C7—C8—O2 | 175.90 (10) |
C1—C2—C3—C4 | −0.33 (15) | O1—C7—C8—N1 | 178.44 (10) |
C2—C3—C4—C5 | −0.54 (16) | C6—C7—C8—N1 | −2.57 (10) |
C3—C4—C5—C6 | 0.97 (15) | C8—N1—C9—C10 | −93.70 (12) |
C4—C5—C6—C1 | −0.55 (14) | C1—N1—C9—C10 | 77.39 (12) |
C4—C5—C6—C7 | 178.57 (10) | N1—C9—C10—C11 | 172.33 (9) |
C2—C1—C6—C5 | −0.32 (14) | C9—C10—C11—C12 | 179.09 (9) |
N1—C1—C6—C5 | 179.35 (8) | C10—C11—C12—C13 | 176.17 (10) |
C2—C1—C6—C7 | −179.63 (8) | C11—C12—C13—C14 | 179.87 (9) |
N1—C1—C6—C7 | 0.04 (10) | C12—C13—C14—C15 | 179.16 (10) |
C5—C6—C7—O1 | 1.18 (19) | C13—C14—C15—C16 | 179.93 (10) |
C1—C6—C7—O1 | −179.61 (11) | C14—C15—C16—C17 | 179.67 (10) |
C5—C6—C7—C8 | −177.70 (10) | C15—C16—C17—C18 | 179.53 (11) |
C1—C6—C7—C8 | 1.50 (10) |
Experimental details
Crystal data | |
Chemical formula | C18H25NO2 |
Mr | 287.39 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 200 |
a, b, c (Å) | 22.7208 (3), 4.7189 (1), 15.8254 (1) |
β (°) | 106.827 (1) |
V (Å3) | 1624.10 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.27 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Bruker X8 APEXII |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 24714, 5240, 3869 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.729 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.154, 1.03 |
No. of reflections | 5240 |
No. of parameters | 190 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.20 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
Acknowledgements
We thank Université Mohammed V-Agdal and the University of Malaya for supporting this study.
References
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bouhfid, R., Joly, N., Ohmani, F., Essassi, E. M., Massoui, M. & Martin, P. (2008). Lett. Org. Chem. pp. 3–7. Google Scholar
Bruker (2008). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Miehe, G., Süsse, P., Kupcik, V., Egert, E., Nieger, M., Kunz, G., Gerke, R., Knieriem, B., Niemeyer, M. & Lüttke, W. (2003). Angew. Chem. Int. Ed. Engl. 30, 964–967. CSD CrossRef Web of Science Google Scholar
Naumov, P., Anastasova, F., Drew, M. G. B. & Ng, S. W. (2002). Bull. Chem. Technol. Macedon. 21, 165–169. CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43. Submitted. Google Scholar
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N-Substituted isatins (Bouhfid et al., 2008) represent a large family of heterocyclic compounds reported to show a wide range of useful medicinal activities. These are readily synthesized by the reaction of isatin and an alkyl halide in the presence of a catalyst. The title decyl derivative (Scheme I, Fig. 1) has a particarly long hydrocarbon chain; the chain adopts a extended zigzag conformation.
The crystal structures of only few N-substituted isatins have been reported; these have only short hydrocarbon chains, e.g., methyl isatin (Miehe et al., 2003) and ethyl isatin (Naumov et al., 2002).