organic compounds
Xyloccensin E
aProgram in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand, and bResearch Centre of Bioorganic Chemistry, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
*Correspondence e-mail: nongnuj.j@chula.ac.th
The title compound (also known as phragmalin triacetate), C35H42O14, is a phragmalin-type limonoid extracted from X. rumphii. The molecule consists of eight rings with the orthoacetate group bridged at positions 1, 8 and 9. The two five-carbocyclic rings (A1 and A2) and the dioxolane ring (G) adopt a distorted The 1,3-dioxane ring (E) exists in a chair conformation. The six-carbocyclic rings (B and C) exhibit a twisted-boat conformation. The lactone ring has a half-chair conformation and the furan ring is planar (r.m.s. deviation = 0.002 Å). Rings A1/B, A2/B, B/C, C/D and C/G are all cis-fused. The two acetoxy groups attached to ring B and the furan ring attached to the lactone ring are in equatorial positions. The porous crystal packing exhibits voids of 688 Å3 and weak intermolecular C—H⋯O interactions. The was assigned on the basis of literature data.
Related literature
For background to the structures of limonoids and their activities, see: Koul et al. (2004); Cui et al. (2005); Pudhom et al. (2009). For related structures and the assignment of the see: Wu et al. (2004); Fan et al. (2007). For puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810016582/cv2715sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810016582/cv2715Isup2.hkl
Air-dried powdered seeds of X. rumphii (0.5 kg) were extracted with MeOH (2 L x 2, each for two days). The extract was concentrated under reduced pressure, followed by suspension in water and extraction with EtOAc. The resulting EtOAc crude extract (4.10 g) was chromatographed on a silica gel column eluted with a gradient of acetone–n-hexane (from 1:9 to 1:1) to yield 12 fractions. Fraction 12 (1.67 g) was further purified by silica gel
eluting with a gradient system of MeOH-CH2Cl2 (from 2:98 to 5:95) and recrystallized from methanol to afford xyloccensin E (1, 79.0 mg).Colorless crystals; mp 168-171 oC; 1H NMR (400 MHz, CDCl3) d 7.51 (1H, s, H-21), 7.40 (1H, s, H-23), 6.44 (1H, s, H-22), 6.30 (1H, s, H-30), 5.54 (1H, s, H-17), 5.10 (1H, s, H-3), 3.69 (3H, s, 7-COOCH3), 3.28 (1H, d, J = 20.3 Hz, H-15a), 2.96 (1H, d, J = 8.5 Hz, H-5), 2.70 (1H, m, H-15 b), 2.47 (1H, m, H-6a), 2.25 (3H, s, 1-OCOCH3), 2.24 (1H, m, H-6 b), 2.15 (3H, s, 3-OCOCH3), 2.07 (1H, m, H-11a), 1.98 (1H, m, H-29a), 1.94 (3H, s, 30-OCOCH3), 1.67 (1H, m, H-29 b), 1.66 (3H, s, 2?-CH3), 1.65 (1H, m, H-11 b), 1.54 (1H, m, H-12a), 1.30 (1H, m, H-12 b), 1.14 (3H, s, 19-CH3), 1.06 (3H, s, 18-CH3), 0.89 (3H, s, 28-CH3); 13C NMR (100 MHz, CDCl3) d 172.7 (C, C-7), 170.4 (C, C-16), 170.2 (C, 1-OCOCH3 and 3-OCOCH3), 168.6 (C, 30-OCOCH3), 143.0 (CH, C-23), 140.8 (CH, C-21), 121.1 (C, C-20), 119.0 (C, C-1?), 109.7 (CH, C-22), 86.8 (C, C-1), 85.9 (C, C-8), 85.3 (C, C-9), 85.2 (C, C-2), 81.1 (CH, C-3), 78.6 (CH, C-17), 69.3 (CH, C-30), 46.2 (C, C-4), 45.7 (C, C-10), 43.1 (C, C-14), 40.2 (CH2, C-29), 35.5 (CH, C-5), 34.3 (C, C-13), 33.3 (CH2, C-6), 29.1 (CH2, C-12), 26.5 (CH2, C-15), 25.4 (CH2, C-11), 21.7 (CH3, 3-OCOCH3), 21.6 (CH3, 30-OCOCH3), 21.1 (CH3, 1-OCOCH3), 21.0 (CH3, C-2?), 19.9 (CH3, C-18), 16.5 (CH3, C-19), 14.6 (CH3, C-28).; HRESIMS m/z 709.2490 [M+Na]+ (calcd for C35H42O14Na, 709.2492).
All H atoms were geometrically positioned and treated as riding atoms with distances C—H = 0.96 Å (CH3), 0.97 Å (CH2), 0.93 Å (CH), and Uiso(H) = 1.20 Ueq(C) for methylene and aromatic, 1.50 Ueq(C) for methyl. Hydrogen atoms bonded to C25 and C35 were treated as rotationally disordered between two orientations each in a ratio 1:1. The
could not be determined from the X-ray analysis, but it was known from earlier work on related compounds (e.g. Wu et al., 2004 and Fan et al., 2007). 3652 Friedel pairs were therefore merged before the final The contained solvent accessible voids of 688 Å3, showed no electrons in the voids. This might indicate that the crystal lost its solvent of crystallization without collapsing of the structure. The highest residual electron density peak (0.77 e Å-3) and the deepest hole (-0.27 e Å-3) were located 0.77 and 0.29 Å at O9 and C15, respectively.Limonoid research from the Meliaceae family is of growing interest due to a range of biological activities, such as insect antifeedants and growth regulators, antibacterial, antifungal, antimalarial, anticancer and antiviral activities on humans (Koul et al., 2004). Such a focused interest upon limonoids from the Meliaceae family has already resulted in a discovery of several limonoids with novel skeletons, mostly, but not exclusively, from the genus Xylocarpus, and, in particular, the cannonball mangrove, Xylocarpus granatum Koenig (Cui et al., 2005; Pudhom et al., 2009). Limonoid derivatives have been found in all Xylocarpus plants studied, but their distribution and content may vary both between different plant species, and between parts or geocultivars of the same species. This, combined with their wide ranging structural diversity and potential biological significance across this plant family, prompted us to investigate another plant in this genus, Xylocarpus rumphii. Herein, the complete assignments of NMR data and the crystal and molecular structure of Xyloccensin E obtained from the seeds of X. rumphii collected from Rayong Province, Thailand, in April 2009, were reported for the first time.
The molecule consists of eight rings with the orthoacetate group bridged at positions of 1, 8 and 9. The two five-carbocyclic rings A1 (C1, C2, C3, C4 and C29) and A2 (C1, C10, C5, C4 and C29) and the dioxlane ring G (C8, C9, O1, C1? and O2) adopt distorted envelope conformations [puckering parameters: q2 = 0.639 Å, φ2 = -132.24° for A1, q2 = 0.572 Å, φ2 = 164.56° for A2 and q2 = 0.440 Å,φ2 = 31.13° for G]. The 1,3-dioxane ring E (C1?, C10, C9, O1, C1 and O3) exists as a chair conformation [puckering parameters: Q = 0.636 Å, q = 133.17° and φ = 17.29°]. The six carbocyclic rings B (C1, C2, C30, C8, C9 and C10) and C (C8, C9, C11, C12, C13 and C14) appear as twisted boat conformations [puckering parameters: Q = 0.815 Å, θ = -28.92°, φ = 84.96° and Q = 0.767 Å, θ = 90.57°, φ = -151.34°, respectively]. The lactone ring is a half-chair conformation and the furan ring is planar. Rings A1/B, A2/B, B/C, C/D, C/G are all The two acetoxy groups attached to ring B are in equatorial positions. The furan ring is attached to the lactone ring in equatorial position, and it is inclined at 56.8 (1) ° with respect to the lactone ring.
The structure is devoid of any classical hydrogen bonds. However, non-classical intra- and intermolecular (Table 1) hydrogen-bonding interactions of the type C—H···O are present in the structure. The
contains solvent accessible voids of 688 Å3.This might indicate that the crystal lost its solvent molecules of crystallization without collapsing of the structure.For background to the structures of limonoids and their activities, see: Koul et al. (2004); Cui et al. (2005); Pudhom et al. (2009). For related structures, see: Wu et al. (2004); Fan et al. (2007). For puckering parameters, see: Cremer & Pople (1975).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: publCIF (Westrip, 2010).C35H42O14 | F(000) = 2184 |
Mr = 686.69 | Dx = 1.275 Mg m−3 |
Hexagonal, P61 | Melting point: 168 K |
Hall symbol: P 61 | Mo Kα radiation, λ = 0.71073 Å |
a = 17.7635 (5) Å | µ = 0.10 mm−1 |
c = 19.6294 (6) Å | T = 100 K |
V = 5364.1 (3) Å3 | Prism, colourless |
Z = 6 | 0.40 × 0.40 × 0.30 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3738 reflections with I > 2σ(I) |
Radiation source: Mo | Rint = 0.040 |
Graphite monochromator | θmax = 27.5°, θmin = 2.5° |
φ and ω scans | h = −23→22 |
28307 measured reflections | k = −22→21 |
4183 independent reflections | l = −22→24 |
Refinement on F2 | 1 restraint |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.046 | w = 1/[σ2(Fo2) + (0.085P)2 + 0.919P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.130 | (Δ/σ)max = 0.029 |
S = 1.10 | Δρmax = 0.77 e Å−3 |
4183 reflections | Δρmin = −0.27 e Å−3 |
445 parameters |
C35H42O14 | Z = 6 |
Mr = 686.69 | Mo Kα radiation |
Hexagonal, P61 | µ = 0.10 mm−1 |
a = 17.7635 (5) Å | T = 100 K |
c = 19.6294 (6) Å | 0.40 × 0.40 × 0.30 mm |
V = 5364.1 (3) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 3738 reflections with I > 2σ(I) |
28307 measured reflections | Rint = 0.040 |
4183 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 1 restraint |
wR(F2) = 0.130 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.77 e Å−3 |
4183 reflections | Δρmin = −0.27 e Å−3 |
445 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1' | 1.16441 (19) | 0.58265 (19) | 0.76883 (15) | 0.0217 (6) | |
C1 | 1.06376 (17) | 0.61547 (17) | 0.81972 (14) | 0.0175 (5) | |
C2' | 1.2166 (2) | 0.5971 (2) | 0.70457 (17) | 0.0296 (7) | |
H2'1 | 1.1781 | 0.576 | 0.6661 | 0.044* | |
H2'2 | 1.2482 | 0.5665 | 0.7077 | 0.044* | |
H2'3 | 1.2567 | 0.6581 | 0.699 | 0.044* | |
C2 | 0.98030 (17) | 0.52150 (17) | 0.82913 (13) | 0.0170 (5) | |
C3 | 0.91974 (17) | 0.54361 (17) | 0.87095 (14) | 0.0170 (5) | |
H3 | 0.8741 | 0.5414 | 0.8416 | 0.02* | |
C4 | 0.98104 (17) | 0.63768 (18) | 0.89457 (15) | 0.0189 (5) | |
C5 | 1.05140 (17) | 0.63106 (18) | 0.93977 (14) | 0.0182 (5) | |
H5 | 1.0243 | 0.5723 | 0.959 | 0.022* | |
C6 | 1.08925 (19) | 0.69610 (19) | 0.99894 (15) | 0.0237 (6) | |
H6A | 1.1462 | 0.7048 | 1.0104 | 0.028* | |
H6B | 1.0967 | 0.7515 | 0.9842 | 0.028* | |
C7 | 1.0333 (2) | 0.6669 (2) | 1.06132 (17) | 0.0307 (7) | |
C8 | 1.09628 (18) | 0.48402 (18) | 0.85465 (14) | 0.0186 (5) | |
C9 | 1.15837 (17) | 0.57860 (18) | 0.88338 (14) | 0.0186 (5) | |
C10 | 1.11894 (17) | 0.63904 (17) | 0.88473 (14) | 0.0169 (5) | |
C11 | 1.20720 (18) | 0.57911 (19) | 0.94751 (15) | 0.0212 (6) | |
H11A | 1.2226 | 0.6312 | 0.9737 | 0.025* | |
H11B | 1.2605 | 0.5804 | 0.9347 | 0.025* | |
C12 | 1.15201 (19) | 0.49887 (19) | 0.99166 (15) | 0.0220 (6) | |
H12A | 1.0969 | 0.4954 | 1.0017 | 0.026* | |
H12B | 1.1817 | 0.5046 | 1.0345 | 0.026* | |
C13 | 1.13502 (19) | 0.41414 (19) | 0.95545 (15) | 0.0211 (6) | |
C14 | 1.13326 (18) | 0.42580 (19) | 0.87763 (15) | 0.0201 (5) | |
H14 | 1.1948 | 0.4589 | 0.8648 | 0.024* | |
C15 | 1.0988 (2) | 0.3398 (2) | 0.83957 (15) | 0.0247 (6) | |
H15A | 1.0761 | 0.3454 | 0.7961 | 0.03* | |
H15B | 1.1477 | 0.3314 | 0.83 | 0.03* | |
C16 | 1.0297 (2) | 0.2590 (2) | 0.87376 (17) | 0.0309 (7) | |
C17 | 1.0464 (2) | 0.33966 (19) | 0.98038 (16) | 0.0240 (6) | |
H17 | 1.0036 | 0.3588 | 0.9758 | 0.029* | |
C18 | 1.2087 (2) | 0.3951 (2) | 0.97206 (16) | 0.0268 (6) | |
H18A | 1.1967 | 0.3416 | 0.9508 | 0.04* | |
H18B | 1.2124 | 0.3903 | 1.0205 | 0.04* | |
H18C | 1.2628 | 0.4416 | 0.9552 | 0.04* | |
C19 | 1.19506 (18) | 0.73425 (18) | 0.88085 (16) | 0.0230 (6) | |
H19A | 1.2293 | 0.7481 | 0.9216 | 0.035* | |
H19B | 1.1722 | 0.7728 | 0.8764 | 0.035* | |
H19C | 1.2308 | 0.7407 | 0.8421 | 0.035* | |
C20 | 1.0459 (2) | 0.3137 (2) | 1.05295 (18) | 0.0308 (7) | |
C21 | 1.0287 (3) | 0.3468 (3) | 1.10853 (19) | 0.0436 (9) | |
H21 | 1.0145 | 0.3906 | 1.1076 | 0.052* | |
C22 | 1.0637 (3) | 0.2486 (3) | 1.0784 (2) | 0.0523 (11) | |
H22 | 1.0777 | 0.2132 | 1.0528 | 0.063* | |
C23 | 1.0561 (3) | 0.2487 (4) | 1.1461 (3) | 0.0651 (15) | |
H23 | 1.0645 | 0.2124 | 1.1754 | 0.078* | |
C24 | 0.79901 (18) | 0.46072 (18) | 0.94503 (15) | 0.0212 (5) | |
C25 | 0.7784 (2) | 0.4132 (2) | 1.01126 (17) | 0.0280 (6) | |
H25A | 0.828 | 0.4098 | 1.0265 | 0.042* | 0.5 |
H25B | 0.73 | 0.3555 | 1.0053 | 0.042* | 0.5 |
H25C | 0.764 | 0.4436 | 1.0445 | 0.042* | 0.5 |
H25D | 0.72 | 0.3961 | 1.0244 | 0.042* | 0.5 |
H25E | 0.8181 | 0.4504 | 1.0456 | 0.042* | 0.5 |
H25F | 0.784 | 0.3624 | 1.0064 | 0.042* | 0.5 |
C28 | 0.9336 (2) | 0.6798 (2) | 0.92673 (17) | 0.0257 (6) | |
H28A | 0.975 | 0.7379 | 0.9405 | 0.039* | |
H28B | 0.9018 | 0.6467 | 0.9658 | 0.039* | |
H28C | 0.8941 | 0.6814 | 0.8942 | 0.039* | |
C29 | 1.02450 (19) | 0.67419 (18) | 0.82469 (15) | 0.0205 (5) | |
H29A | 0.9828 | 0.6636 | 0.7888 | 0.025* | |
H29B | 1.0681 | 0.7354 | 0.8265 | 0.025* | |
C30 | 1.00034 (17) | 0.45462 (17) | 0.86481 (14) | 0.0171 (5) | |
H30 | 0.9871 | 0.4515 | 0.9136 | 0.021* | |
C31 | 0.87864 (19) | 0.30753 (19) | 0.86851 (19) | 0.0278 (7) | |
C32 | 0.8275 (2) | 0.2305 (2) | 0.8248 (2) | 0.0422 (9) | |
H32A | 0.7737 | 0.1915 | 0.8469 | 0.063* | |
H32B | 0.86 | 0.2014 | 0.8171 | 0.063* | |
H32C | 0.8158 | 0.2487 | 0.7819 | 0.063* | |
C33 | 0.86812 (19) | 0.43362 (19) | 0.74661 (16) | 0.0224 (6) | |
C34 | 0.8570 (2) | 0.4182 (2) | 0.67120 (18) | 0.0360 (8) | |
H34A | 0.8444 | 0.3601 | 0.6613 | 0.054* | |
H34B | 0.9096 | 0.459 | 0.6484 | 0.054* | |
H34C | 0.8099 | 0.4256 | 0.6556 | 0.054* | |
C35 | 1.0148 (3) | 0.7155 (4) | 1.1691 (2) | 0.0732 (18) | |
H35A | 1.0391 | 0.7675 | 1.196 | 0.11* | 0.5 |
H35B | 1.0208 | 0.6716 | 1.1929 | 0.11* | 0.5 |
H35C | 0.9543 | 0.6952 | 1.161 | 0.11* | 0.5 |
H35D | 0.9704 | 0.6554 | 1.1706 | 0.11* | 0.5 |
H35E | 0.9887 | 0.7513 | 1.1737 | 0.11* | 0.5 |
H35F | 1.0552 | 0.7277 | 1.2057 | 0.11* | 0.5 |
O1 | 1.21889 (12) | 0.61294 (13) | 0.82626 (11) | 0.0214 (4) | |
O2 | 1.10977 (13) | 0.49352 (13) | 0.78162 (10) | 0.0208 (4) | |
O3 | 1.11411 (13) | 0.62397 (13) | 0.76107 (10) | 0.0207 (4) | |
O4 | 0.88190 (12) | 0.48674 (13) | 0.92764 (10) | 0.0184 (4) | |
O6 | 0.95079 (12) | 0.49548 (12) | 0.75992 (10) | 0.0198 (4) | |
O7 | 0.94979 (13) | 0.36999 (12) | 0.83415 (11) | 0.0215 (4) | |
O8 | 1.01541 (16) | 0.25960 (14) | 0.94147 (12) | 0.0308 (5) | |
O9 | 0.9896 (2) | 0.19177 (17) | 0.84406 (16) | 0.0500 (7) | |
O10 | 1.0349 (2) | 0.3077 (2) | 1.16646 (14) | 0.0602 (10) | |
O11 | 0.75158 (15) | 0.47641 (17) | 0.91176 (13) | 0.0351 (6) | |
O13 | 0.86291 (15) | 0.31476 (14) | 0.92703 (13) | 0.0318 (5) | |
O14 | 0.81228 (14) | 0.39672 (14) | 0.78855 (12) | 0.0266 (5) | |
O15 | 0.97453 (19) | 0.59611 (19) | 1.07362 (14) | 0.0504 (8) | |
O16 | 1.05994 (17) | 0.7337 (2) | 1.10510 (14) | 0.0500 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1' | 0.0198 (13) | 0.0228 (14) | 0.0195 (13) | 0.0085 (11) | 0.0022 (11) | 0.0031 (11) |
C1 | 0.0163 (12) | 0.0178 (12) | 0.0169 (12) | 0.0073 (10) | 0.0012 (10) | 0.0031 (10) |
C2' | 0.0278 (16) | 0.0324 (16) | 0.0252 (16) | 0.0126 (13) | 0.0102 (13) | 0.0070 (13) |
C2 | 0.0157 (12) | 0.0181 (12) | 0.0145 (12) | 0.0065 (10) | −0.0021 (9) | −0.0002 (10) |
C3 | 0.0150 (12) | 0.0178 (12) | 0.0176 (12) | 0.0077 (10) | 0.0001 (10) | 0.0019 (10) |
C4 | 0.0143 (12) | 0.0179 (13) | 0.0226 (13) | 0.0066 (10) | −0.0018 (10) | −0.0003 (10) |
C5 | 0.0157 (12) | 0.0185 (12) | 0.0193 (13) | 0.0076 (10) | −0.0009 (10) | 0.0009 (10) |
C6 | 0.0184 (13) | 0.0243 (14) | 0.0244 (14) | 0.0077 (11) | −0.0026 (11) | −0.0056 (12) |
C7 | 0.0228 (15) | 0.0396 (18) | 0.0222 (14) | 0.0099 (14) | −0.0055 (12) | −0.0079 (13) |
C8 | 0.0164 (12) | 0.0224 (13) | 0.0180 (13) | 0.0104 (11) | 0.0009 (10) | 0.0022 (10) |
C9 | 0.0124 (11) | 0.0213 (13) | 0.0205 (13) | 0.0072 (10) | 0.0016 (10) | 0.0028 (10) |
C10 | 0.0141 (12) | 0.0165 (12) | 0.0182 (12) | 0.0063 (10) | 0.0000 (9) | 0.0013 (10) |
C11 | 0.0182 (13) | 0.0255 (14) | 0.0193 (13) | 0.0104 (11) | −0.0019 (10) | 0.0008 (11) |
C12 | 0.0206 (13) | 0.0269 (14) | 0.0194 (13) | 0.0124 (11) | −0.0004 (11) | 0.0013 (11) |
C13 | 0.0216 (13) | 0.0268 (14) | 0.0184 (13) | 0.0146 (12) | 0.0034 (11) | 0.0047 (11) |
C14 | 0.0186 (13) | 0.0263 (14) | 0.0194 (13) | 0.0142 (11) | 0.0015 (10) | 0.0018 (11) |
C15 | 0.0297 (15) | 0.0292 (15) | 0.0214 (14) | 0.0194 (13) | 0.0013 (12) | 0.0000 (11) |
C16 | 0.0389 (18) | 0.0290 (16) | 0.0287 (16) | 0.0200 (15) | 0.0031 (14) | 0.0008 (13) |
C17 | 0.0251 (14) | 0.0246 (14) | 0.0230 (14) | 0.0129 (12) | 0.0006 (11) | 0.0011 (11) |
C18 | 0.0266 (15) | 0.0343 (16) | 0.0263 (15) | 0.0204 (13) | −0.0008 (12) | 0.0039 (13) |
C19 | 0.0151 (12) | 0.0179 (13) | 0.0261 (14) | 0.0008 (11) | 0.0010 (11) | 0.0021 (11) |
C20 | 0.0243 (15) | 0.0332 (17) | 0.0287 (16) | 0.0096 (13) | 0.0038 (12) | 0.0080 (13) |
C21 | 0.0390 (19) | 0.040 (2) | 0.0275 (18) | 0.0015 (16) | 0.0070 (15) | 0.0009 (15) |
C22 | 0.064 (3) | 0.062 (3) | 0.042 (2) | 0.040 (2) | 0.010 (2) | 0.024 (2) |
C23 | 0.056 (3) | 0.085 (4) | 0.039 (2) | 0.024 (3) | 0.002 (2) | 0.030 (2) |
C24 | 0.0182 (13) | 0.0213 (13) | 0.0242 (14) | 0.0099 (11) | 0.0025 (11) | 0.0020 (11) |
C25 | 0.0231 (14) | 0.0292 (16) | 0.0284 (15) | 0.0106 (13) | 0.0066 (12) | 0.0080 (12) |
C28 | 0.0241 (14) | 0.0270 (15) | 0.0302 (16) | 0.0159 (12) | −0.0019 (12) | −0.0015 (12) |
C29 | 0.0213 (13) | 0.0187 (13) | 0.0214 (13) | 0.0100 (11) | 0.0000 (11) | 0.0030 (11) |
C30 | 0.0143 (12) | 0.0154 (12) | 0.0205 (13) | 0.0066 (10) | −0.0010 (10) | 0.0005 (10) |
C31 | 0.0194 (14) | 0.0179 (14) | 0.0444 (19) | 0.0079 (11) | 0.0013 (13) | 0.0037 (13) |
C32 | 0.0288 (17) | 0.0205 (15) | 0.066 (3) | 0.0035 (13) | 0.0037 (17) | −0.0040 (16) |
C33 | 0.0208 (13) | 0.0195 (13) | 0.0264 (14) | 0.0097 (12) | −0.0066 (12) | −0.0034 (11) |
C34 | 0.0328 (18) | 0.0370 (18) | 0.0273 (17) | 0.0091 (15) | −0.0090 (14) | −0.0083 (13) |
C35 | 0.039 (2) | 0.111 (4) | 0.036 (2) | 0.012 (3) | 0.0052 (18) | −0.035 (3) |
O1 | 0.0151 (9) | 0.0247 (10) | 0.0207 (10) | 0.0072 (8) | 0.0027 (8) | 0.0026 (8) |
O2 | 0.0215 (10) | 0.0227 (10) | 0.0163 (9) | 0.0095 (8) | 0.0026 (7) | 0.0038 (8) |
O3 | 0.0208 (9) | 0.0225 (10) | 0.0171 (9) | 0.0094 (8) | 0.0036 (7) | 0.0035 (8) |
O4 | 0.0142 (9) | 0.0197 (9) | 0.0200 (10) | 0.0075 (7) | 0.0012 (7) | 0.0045 (7) |
O6 | 0.0195 (9) | 0.0199 (9) | 0.0175 (9) | 0.0080 (8) | −0.0043 (7) | −0.0023 (7) |
O7 | 0.0188 (9) | 0.0160 (9) | 0.0276 (10) | 0.0072 (8) | −0.0006 (8) | −0.0003 (8) |
O8 | 0.0372 (12) | 0.0228 (10) | 0.0284 (11) | 0.0119 (10) | 0.0035 (10) | 0.0018 (9) |
O9 | 0.0683 (19) | 0.0263 (13) | 0.0443 (15) | 0.0154 (13) | 0.0063 (14) | −0.0075 (11) |
O10 | 0.0501 (17) | 0.068 (2) | 0.0228 (14) | 0.0001 (16) | 0.0038 (12) | 0.0066 (14) |
O11 | 0.0226 (11) | 0.0506 (14) | 0.0375 (13) | 0.0225 (11) | 0.0073 (10) | 0.0155 (11) |
O13 | 0.0267 (11) | 0.0232 (11) | 0.0425 (14) | 0.0103 (9) | 0.0095 (10) | 0.0090 (10) |
O14 | 0.0207 (10) | 0.0248 (10) | 0.0294 (11) | 0.0078 (9) | −0.0025 (9) | −0.0004 (9) |
O15 | 0.0473 (16) | 0.0454 (16) | 0.0280 (13) | 0.0003 (13) | 0.0066 (12) | 0.0006 (11) |
O16 | 0.0336 (13) | 0.0577 (17) | 0.0362 (15) | 0.0059 (12) | 0.0084 (11) | −0.0241 (13) |
C1'—O2 | 1.405 (3) | C17—O8 | 1.458 (4) |
C1'—O1 | 1.406 (4) | C17—C20 | 1.496 (4) |
C1'—O3 | 1.420 (4) | C17—H17 | 0.98 |
C1'—C2' | 1.509 (4) | C18—H18A | 0.96 |
C1—O3 | 1.419 (3) | C18—H18B | 0.96 |
C1—C29 | 1.520 (4) | C18—H18C | 0.96 |
C1—C10 | 1.534 (4) | C19—H19A | 0.96 |
C1—C2 | 1.595 (4) | C19—H19B | 0.96 |
C2'—H2'1 | 0.96 | C19—H19C | 0.96 |
C2'—H2'2 | 0.96 | C20—C21 | 1.346 (6) |
C2'—H2'3 | 0.96 | C20—C22 | 1.431 (5) |
C2—O6 | 1.446 (3) | C21—O10 | 1.365 (5) |
C2—C3 | 1.552 (4) | C21—H21 | 0.93 |
C2—C30 | 1.566 (4) | C22—C23 | 1.336 (7) |
C3—O4 | 1.425 (3) | C22—H22 | 0.93 |
C3—C4 | 1.541 (4) | C23—O10 | 1.342 (8) |
C3—H3 | 0.98 | C23—H23 | 0.93 |
C4—C28 | 1.515 (4) | C24—O11 | 1.204 (4) |
C4—C29 | 1.548 (4) | C24—O4 | 1.348 (3) |
C4—C5 | 1.584 (4) | C24—C25 | 1.493 (4) |
C5—C6 | 1.536 (4) | C25—H25A | 0.96 |
C5—C10 | 1.567 (4) | C25—H25B | 0.96 |
C5—H5 | 0.98 | C25—H25C | 0.96 |
C6—C7 | 1.497 (4) | C25—H25D | 0.96 |
C6—H6A | 0.97 | C25—H25E | 0.96 |
C6—H6B | 0.97 | C25—H25F | 0.96 |
C7—O15 | 1.190 (4) | C28—H28A | 0.96 |
C7—O16 | 1.345 (4) | C28—H28B | 0.96 |
C8—O2 | 1.449 (3) | C28—H28C | 0.96 |
C8—C30 | 1.525 (4) | C29—H29A | 0.97 |
C8—C14 | 1.544 (4) | C29—H29B | 0.97 |
C8—C9 | 1.582 (4) | C30—O7 | 1.442 (3) |
C9—O1 | 1.459 (3) | C30—H30 | 0.98 |
C9—C11 | 1.526 (4) | C31—O13 | 1.204 (4) |
C9—C10 | 1.548 (4) | C31—O7 | 1.372 (4) |
C10—C19 | 1.552 (4) | C31—C32 | 1.481 (5) |
C11—C12 | 1.532 (4) | C32—H32A | 0.96 |
C11—H11A | 0.97 | C32—H32B | 0.96 |
C11—H11B | 0.97 | C32—H32C | 0.96 |
C12—C13 | 1.551 (4) | C33—O14 | 1.201 (4) |
C12—H12A | 0.97 | C33—O6 | 1.348 (3) |
C12—H12B | 0.97 | C33—C34 | 1.500 (5) |
C13—C18 | 1.541 (4) | C34—H34A | 0.96 |
C13—C14 | 1.544 (4) | C34—H34B | 0.96 |
C13—C17 | 1.544 (4) | C34—H34C | 0.96 |
C14—C15 | 1.527 (4) | C35—O16 | 1.437 (5) |
C14—H14 | 0.98 | C35—H35A | 0.96 |
C15—C16 | 1.502 (5) | C35—H35B | 0.96 |
C15—H15A | 0.97 | C35—H35C | 0.96 |
C15—H15B | 0.97 | C35—H35D | 0.96 |
C16—O9 | 1.193 (4) | C35—H35E | 0.96 |
C16—O8 | 1.354 (4) | C35—H35F | 0.96 |
O2—C1'—O1 | 104.1 (2) | C13—C18—H18C | 109.5 |
O2—C1'—O3 | 110.0 (2) | H18A—C18—H18C | 109.5 |
O1—C1'—O3 | 112.3 (2) | H18B—C18—H18C | 109.5 |
O2—C1'—C2' | 111.2 (2) | C10—C19—H19A | 109.5 |
O1—C1'—C2' | 111.0 (2) | C10—C19—H19B | 109.5 |
O3—C1'—C2' | 108.3 (2) | H19A—C19—H19B | 109.5 |
O3—C1—C29 | 117.4 (2) | C10—C19—H19C | 109.5 |
O3—C1—C10 | 111.3 (2) | H19A—C19—H19C | 109.5 |
C29—C1—C10 | 102.1 (2) | H19B—C19—H19C | 109.5 |
O3—C1—C2 | 114.3 (2) | C21—C20—C22 | 105.1 (4) |
C29—C1—C2 | 101.9 (2) | C21—C20—C17 | 127.2 (3) |
C10—C1—C2 | 108.8 (2) | C22—C20—C17 | 127.7 (3) |
C1'—C2'—H2'1 | 109.5 | C20—C21—O10 | 111.1 (4) |
C1'—C2'—H2'2 | 109.5 | C20—C21—H21 | 124.5 |
H2'1—C2'—H2'2 | 109.5 | O10—C21—H21 | 124.5 |
C1'—C2'—H2'3 | 109.5 | C23—C22—C20 | 106.5 (5) |
H2'1—C2'—H2'3 | 109.5 | C23—C22—H22 | 126.8 |
H2'2—C2'—H2'3 | 109.5 | C20—C22—H22 | 126.8 |
O6—C2—C3 | 113.0 (2) | C22—C23—O10 | 111.4 (4) |
O6—C2—C30 | 111.2 (2) | C22—C23—H23 | 124.3 |
C3—C2—C30 | 113.9 (2) | O10—C23—H23 | 124.3 |
O6—C2—C1 | 103.0 (2) | O11—C24—O4 | 123.7 (3) |
C3—C2—C1 | 101.3 (2) | O11—C24—C25 | 127.0 (3) |
C30—C2—C1 | 113.6 (2) | O4—C24—C25 | 109.3 (2) |
O4—C3—C4 | 111.2 (2) | C24—C25—H25A | 109.5 |
O4—C3—C2 | 112.0 (2) | C24—C25—H25B | 109.5 |
C4—C3—C2 | 103.3 (2) | H25A—C25—H25B | 109.5 |
O4—C3—H3 | 110.1 | C24—C25—H25C | 109.5 |
C4—C3—H3 | 110.1 | H25A—C25—H25C | 109.5 |
C2—C3—H3 | 110.1 | H25B—C25—H25C | 109.5 |
C28—C4—C3 | 113.3 (2) | C24—C25—H25D | 109.5 |
C28—C4—C29 | 116.5 (2) | H25A—C25—H25D | 141.1 |
C3—C4—C29 | 97.0 (2) | H25B—C25—H25D | 56.3 |
C28—C4—C5 | 117.2 (2) | H25C—C25—H25D | 56.3 |
C3—C4—C5 | 104.1 (2) | C24—C25—H25E | 109.5 |
C29—C4—C5 | 106.3 (2) | H25A—C25—H25E | 56.3 |
C6—C5—C10 | 115.2 (2) | H25B—C25—H25E | 141.1 |
C6—C5—C4 | 115.6 (2) | H25C—C25—H25E | 56.3 |
C10—C5—C4 | 101.8 (2) | H25D—C25—H25E | 109.5 |
C6—C5—H5 | 107.9 | C24—C25—H25F | 109.5 |
C10—C5—H5 | 107.9 | H25A—C25—H25F | 56.3 |
C4—C5—H5 | 107.9 | H25B—C25—H25F | 56.3 |
C7—C6—C5 | 113.1 (2) | H25C—C25—H25F | 141.1 |
C7—C6—H6A | 109 | H25D—C25—H25F | 109.5 |
C5—C6—H6A | 109 | H25E—C25—H25F | 109.5 |
C7—C6—H6B | 109 | C4—C28—H28A | 109.5 |
C5—C6—H6B | 109 | C4—C28—H28B | 109.5 |
H6A—C6—H6B | 107.8 | H28A—C28—H28B | 109.5 |
O15—C7—O16 | 122.6 (3) | C4—C28—H28C | 109.5 |
O15—C7—C6 | 127.7 (3) | H28A—C28—H28C | 109.5 |
O16—C7—C6 | 109.7 (3) | H28B—C28—H28C | 109.5 |
O2—C8—C30 | 105.1 (2) | C1—C29—C4 | 94.2 (2) |
O2—C8—C14 | 105.4 (2) | C1—C29—H29A | 112.9 |
C30—C8—C14 | 120.6 (2) | C4—C29—H29A | 112.9 |
O2—C8—C9 | 104.0 (2) | C1—C29—H29B | 112.9 |
C30—C8—C9 | 112.5 (2) | C4—C29—H29B | 112.9 |
C14—C8—C9 | 107.6 (2) | H29A—C29—H29B | 110.3 |
O1—C9—C11 | 109.5 (2) | O7—C30—C8 | 108.0 (2) |
O1—C9—C10 | 102.6 (2) | O7—C30—C2 | 110.2 (2) |
C11—C9—C10 | 115.8 (2) | C8—C30—C2 | 108.7 (2) |
O1—C9—C8 | 98.4 (2) | O7—C30—H30 | 110 |
C11—C9—C8 | 113.1 (2) | C8—C30—H30 | 110 |
C10—C9—C8 | 115.2 (2) | C2—C30—H30 | 110 |
C1—C10—C9 | 104.2 (2) | O13—C31—O7 | 123.5 (3) |
C1—C10—C19 | 110.3 (2) | O13—C31—C32 | 125.7 (3) |
C9—C10—C19 | 107.8 (2) | O7—C31—C32 | 110.7 (3) |
C1—C10—C5 | 101.1 (2) | C31—C32—H32A | 109.5 |
C9—C10—C5 | 122.7 (2) | C31—C32—H32B | 109.5 |
C19—C10—C5 | 110.0 (2) | H32A—C32—H32B | 109.5 |
C9—C11—C12 | 111.3 (2) | C31—C32—H32C | 109.5 |
C9—C11—H11A | 109.4 | H32A—C32—H32C | 109.5 |
C12—C11—H11A | 109.4 | H32B—C32—H32C | 109.5 |
C9—C11—H11B | 109.4 | O14—C33—O6 | 125.3 (3) |
C12—C11—H11B | 109.4 | O14—C33—C34 | 125.4 (3) |
H11A—C11—H11B | 108 | O6—C33—C34 | 109.3 (3) |
C11—C12—C13 | 111.5 (2) | C33—C34—H34A | 109.5 |
C11—C12—H12A | 109.3 | C33—C34—H34B | 109.5 |
C13—C12—H12A | 109.3 | H34A—C34—H34B | 109.5 |
C11—C12—H12B | 109.3 | C33—C34—H34C | 109.5 |
C13—C12—H12B | 109.3 | H34A—C34—H34C | 109.5 |
H12A—C12—H12B | 108 | H34B—C34—H34C | 109.5 |
C18—C13—C14 | 108.4 (2) | O16—C35—H35A | 109.5 |
C18—C13—C17 | 111.0 (2) | O16—C35—H35B | 109.5 |
C14—C13—C17 | 110.4 (2) | H35A—C35—H35B | 109.5 |
C18—C13—C12 | 109.9 (2) | O16—C35—H35C | 109.5 |
C14—C13—C12 | 109.3 (2) | H35A—C35—H35C | 109.5 |
C17—C13—C12 | 107.9 (2) | H35B—C35—H35C | 109.5 |
C15—C14—C13 | 112.0 (2) | O16—C35—H35D | 109.5 |
C15—C14—C8 | 115.8 (2) | H35A—C35—H35D | 141.1 |
C13—C14—C8 | 115.0 (2) | H35B—C35—H35D | 56.3 |
C15—C14—H14 | 104.1 | H35C—C35—H35D | 56.3 |
C13—C14—H14 | 104.1 | O16—C35—H35E | 109.5 |
C8—C14—H14 | 104.1 | H35A—C35—H35E | 56.3 |
C16—C15—C14 | 117.7 (3) | H35B—C35—H35E | 141.1 |
C16—C15—H15A | 107.9 | H35C—C35—H35E | 56.3 |
C14—C15—H15A | 107.9 | H35D—C35—H35E | 109.5 |
C16—C15—H15B | 107.9 | O16—C35—H35F | 109.5 |
C14—C15—H15B | 107.9 | H35A—C35—H35F | 56.3 |
H15A—C15—H15B | 107.2 | H35B—C35—H35F | 56.3 |
O9—C16—O8 | 117.8 (3) | H35C—C35—H35F | 141.1 |
O9—C16—C15 | 122.1 (3) | H35D—C35—H35F | 109.5 |
O8—C16—C15 | 119.9 (3) | H35E—C35—H35F | 109.5 |
O8—C17—C20 | 104.9 (2) | C1'—O1—C9 | 103.5 (2) |
O8—C17—C13 | 113.3 (2) | C1'—O2—C8 | 106.8 (2) |
C20—C17—C13 | 114.4 (3) | C1'—O3—C1 | 112.6 (2) |
O8—C17—H17 | 108 | C24—O4—C3 | 119.2 (2) |
C20—C17—H17 | 108 | C33—O6—C2 | 121.0 (2) |
C13—C17—H17 | 108 | C31—O7—C30 | 118.7 (2) |
C13—C18—H18A | 109.5 | C16—O8—C17 | 122.7 (3) |
C13—C18—H18B | 109.5 | C23—O10—C21 | 106.0 (3) |
H18A—C18—H18B | 109.5 | C7—O16—C35 | 116.7 (3) |
O3—C1—C2—O6 | −36.7 (3) | O2—C8—C14—C13 | 173.8 (2) |
C29—C1—C2—O6 | 91.0 (2) | C30—C8—C14—C13 | −67.7 (3) |
C10—C1—C2—O6 | −161.8 (2) | C9—C8—C14—C13 | 63.3 (3) |
O3—C1—C2—C3 | −153.8 (2) | C13—C14—C15—C16 | 33.8 (4) |
C29—C1—C2—C3 | −26.1 (2) | C8—C14—C15—C16 | −100.8 (3) |
C10—C1—C2—C3 | 81.1 (2) | C14—C15—C16—O9 | 168.1 (3) |
O3—C1—C2—C30 | 83.7 (3) | C14—C15—C16—O8 | −16.5 (4) |
C29—C1—C2—C30 | −148.7 (2) | C18—C13—C17—O8 | −69.8 (3) |
C10—C1—C2—C30 | −41.4 (3) | C14—C13—C17—O8 | 50.4 (3) |
O6—C2—C3—O4 | 117.4 (2) | C12—C13—C17—O8 | 169.7 (2) |
C30—C2—C3—O4 | −10.7 (3) | C18—C13—C17—C20 | 50.4 (4) |
C1—C2—C3—O4 | −133.1 (2) | C14—C13—C17—C20 | 170.6 (3) |
O6—C2—C3—C4 | −122.9 (2) | C12—C13—C17—C20 | −70.1 (3) |
C30—C2—C3—C4 | 109.0 (2) | O8—C17—C20—C21 | −146.0 (3) |
C1—C2—C3—C4 | −13.4 (2) | C13—C17—C20—C21 | 89.2 (4) |
O4—C3—C4—C28 | −69.5 (3) | O8—C17—C20—C22 | 34.1 (5) |
C2—C3—C4—C28 | 170.2 (2) | C13—C17—C20—C22 | −90.7 (4) |
O4—C3—C4—C29 | 167.7 (2) | C22—C20—C21—O10 | 0.4 (4) |
C2—C3—C4—C29 | 47.4 (2) | C17—C20—C21—O10 | −179.6 (3) |
O4—C3—C4—C5 | 58.9 (3) | C21—C20—C22—C23 | −0.3 (5) |
C2—C3—C4—C5 | −61.4 (2) | C17—C20—C22—C23 | 179.6 (4) |
C28—C4—C5—C6 | −22.4 (4) | C20—C22—C23—O10 | 0.2 (6) |
C3—C4—C5—C6 | −148.3 (2) | O3—C1—C29—C4 | −179.6 (2) |
C29—C4—C5—C6 | 109.9 (3) | C10—C1—C29—C4 | −57.7 (2) |
C28—C4—C5—C10 | −148.0 (2) | C2—C1—C29—C4 | 54.7 (2) |
C3—C4—C5—C10 | 86.1 (2) | C28—C4—C29—C1 | 177.0 (2) |
C29—C4—C5—C10 | −15.7 (3) | C3—C4—C29—C1 | −62.7 (2) |
C10—C5—C6—C7 | −158.4 (3) | C5—C4—C29—C1 | 44.3 (2) |
C4—C5—C6—C7 | 83.2 (3) | O2—C8—C30—O7 | 64.8 (3) |
C5—C6—C7—O15 | 14.5 (5) | C14—C8—C30—O7 | −53.9 (3) |
C5—C6—C7—O16 | −166.8 (3) | C9—C8—C30—O7 | 177.3 (2) |
O2—C8—C9—O1 | −22.2 (2) | O2—C8—C30—C2 | −54.8 (3) |
C30—C8—C9—O1 | −135.4 (2) | C14—C8—C30—C2 | −173.5 (2) |
C14—C8—C9—O1 | 89.3 (2) | C9—C8—C30—C2 | 57.8 (3) |
O2—C8—C9—C11 | −137.7 (2) | O6—C2—C30—O7 | −25.9 (3) |
C30—C8—C9—C11 | 109.1 (3) | C3—C2—C30—O7 | 103.2 (2) |
C14—C8—C9—C11 | −26.2 (3) | C1—C2—C30—O7 | −141.5 (2) |
O2—C8—C9—C10 | 86.0 (3) | O6—C2—C30—C8 | 92.3 (3) |
C30—C8—C9—C10 | −27.2 (3) | C3—C2—C30—C8 | −138.6 (2) |
C14—C8—C9—C10 | −162.5 (2) | C1—C2—C30—C8 | −23.3 (3) |
O3—C1—C10—C9 | −55.7 (3) | O2—C1'—O1—C9 | −49.3 (3) |
C29—C1—C10—C9 | 178.3 (2) | O3—C1'—O1—C9 | 69.7 (3) |
C2—C1—C10—C9 | 71.1 (3) | C2'—C1'—O1—C9 | −169.0 (2) |
O3—C1—C10—C19 | 59.7 (3) | C11—C9—O1—C1' | 160.9 (2) |
C29—C1—C10—C19 | −66.3 (3) | C10—C9—O1—C1' | −75.6 (2) |
C2—C1—C10—C19 | −173.5 (2) | C8—C9—O1—C1' | 42.6 (2) |
O3—C1—C10—C5 | 176.1 (2) | O1—C1'—O2—C8 | 33.2 (3) |
C29—C1—C10—C5 | 50.1 (2) | O3—C1'—O2—C8 | −87.3 (3) |
C2—C1—C10—C5 | −57.0 (3) | C2'—C1'—O2—C8 | 152.8 (2) |
O1—C9—C10—C1 | 68.8 (2) | C30—C8—O2—C1' | 112.8 (2) |
C11—C9—C10—C1 | −172.0 (2) | C14—C8—O2—C1' | −118.8 (2) |
C8—C9—C10—C1 | −36.9 (3) | C9—C8—O2—C1' | −5.7 (3) |
O1—C9—C10—C19 | −48.3 (3) | O2—C1'—O3—C1 | 59.5 (3) |
C11—C9—C10—C19 | 70.8 (3) | O1—C1'—O3—C1 | −55.9 (3) |
C8—C9—C10—C19 | −154.0 (2) | C2'—C1'—O3—C1 | −178.8 (2) |
O1—C9—C10—C5 | −177.6 (2) | C29—C1—O3—C1' | 165.6 (2) |
C11—C9—C10—C5 | −58.5 (3) | C10—C1—O3—C1' | 48.6 (3) |
C8—C9—C10—C5 | 76.6 (3) | C2—C1—O3—C1' | −75.1 (3) |
C6—C5—C10—C1 | −145.5 (2) | O11—C24—O4—C3 | 6.9 (4) |
C4—C5—C10—C1 | −19.6 (2) | C25—C24—O4—C3 | −171.5 (2) |
C6—C5—C10—C9 | 99.4 (3) | C4—C3—O4—C24 | 102.6 (3) |
C4—C5—C10—C9 | −134.7 (2) | C2—C3—O4—C24 | −142.4 (2) |
C6—C5—C10—C19 | −28.9 (3) | O14—C33—O6—C2 | 1.8 (4) |
C4—C5—C10—C19 | 97.0 (2) | C34—C33—O6—C2 | −178.2 (3) |
O1—C9—C11—C12 | −142.6 (2) | C3—C2—O6—C33 | −50.3 (3) |
C10—C9—C11—C12 | 102.2 (3) | C30—C2—O6—C33 | 79.2 (3) |
C8—C9—C11—C12 | −33.9 (3) | C1—C2—O6—C33 | −158.8 (2) |
C9—C11—C12—C13 | 66.1 (3) | O13—C31—O7—C30 | −11.3 (4) |
C11—C12—C13—C18 | 88.7 (3) | C32—C31—O7—C30 | 171.0 (3) |
C11—C12—C13—C14 | −30.1 (3) | C8—C30—O7—C31 | 137.3 (2) |
C11—C12—C13—C17 | −150.2 (2) | C2—C30—O7—C31 | −104.1 (3) |
C18—C13—C14—C15 | 71.8 (3) | O9—C16—O8—C17 | −167.2 (3) |
C17—C13—C14—C15 | −49.9 (3) | C15—C16—O8—C17 | 17.2 (5) |
C12—C13—C14—C15 | −168.4 (2) | C20—C17—O8—C16 | −160.4 (3) |
C18—C13—C14—C8 | −153.2 (2) | C13—C17—O8—C16 | −35.0 (4) |
C17—C13—C14—C8 | 85.1 (3) | C22—C23—O10—C21 | 0.0 (6) |
C12—C13—C14—C8 | −33.4 (3) | C20—C21—O10—C23 | −0.3 (4) |
O2—C8—C14—C15 | −52.9 (3) | O15—C7—O16—C35 | 1.1 (6) |
C30—C8—C14—C15 | 65.6 (3) | C6—C7—O16—C35 | −177.7 (4) |
C9—C8—C14—C15 | −163.5 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6A···O11i | 0.97 | 2.41 | 3.326 (3) | 157 |
C25—H25B···O1ii | 0.96 | 2.34 | 3.294 (3) | 176 |
C29—H29A···O10iii | 0.97 | 2.51 | 3.348 (3) | 145 |
C34—H34A···O11iv | 0.96 | 2.62 | 3.293 (3) | 127 |
Symmetry codes: (i) x−y+1, x, z+1/6; (ii) x−y, x−1, z+1/6; (iii) −x+2, −y+1, z−1/2; (iv) −x+y+1, −x+1, z−1/3. |
Experimental details
Crystal data | |
Chemical formula | C35H42O14 |
Mr | 686.69 |
Crystal system, space group | Hexagonal, P61 |
Temperature (K) | 100 |
a, c (Å) | 17.7635 (5), 19.6294 (6) |
V (Å3) | 5364.1 (3) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.40 × 0.40 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 28307, 4183, 3738 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.130, 1.10 |
No. of reflections | 4183 |
No. of parameters | 445 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.77, −0.27 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6A···O11i | 0.97 | 2.41 | 3.326 (3) | 156.7 |
C25—H25B···O1ii | 0.96 | 2.34 | 3.294 (3) | 176.1 |
C29—H29A···O10iii | 0.97 | 2.51 | 3.348 (3) | 144.8 |
C34—H34A···O11iv | 0.96 | 2.62 | 3.293 (3) | 127.1 |
Symmetry codes: (i) x−y+1, x, z+1/6; (ii) x−y, x−1, z+1/6; (iii) −x+2, −y+1, z−1/2; (iv) −x+y+1, −x+1, z−1/3. |
Acknowledgements
Financial support from the 90th Anniversary of Chulalongkorn University Fund (Ratchadaphisek Somphot Endowment Fund) is gratefully acknowledged. The authors also thank the Center for Petroleum, Petrochemicals and Advanced Materials, Chulalongkorn University, for partial support. Finally, the authors are grateful for research funds from the Faculty of Science (A1B1), the Thai Government Stimulus Package 2 (TKK2555), under the Project for Establishment of a Comprehensive Center for Innovative Food, Health Products and Agriculture, for support of the X-ray Crystallographic analysis.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Limonoid research from the Meliaceae family is of growing interest due to a range of biological activities, such as insect antifeedants and growth regulators, antibacterial, antifungal, antimalarial, anticancer and antiviral activities on humans (Koul et al., 2004). Such a focused interest upon limonoids from the Meliaceae family has already resulted in a discovery of several limonoids with novel skeletons, mostly, but not exclusively, from the genus Xylocarpus, and, in particular, the cannonball mangrove, Xylocarpus granatum Koenig (Cui et al., 2005; Pudhom et al., 2009). Limonoid derivatives have been found in all Xylocarpus plants studied, but their distribution and content may vary both between different plant species, and between parts or geocultivars of the same species. This, combined with their wide ranging structural diversity and potential biological significance across this plant family, prompted us to investigate another plant in this genus, Xylocarpus rumphii. Herein, the complete assignments of NMR data and the crystal and molecular structure of Xyloccensin E obtained from the seeds of X. rumphii collected from Rayong Province, Thailand, in April 2009, were reported for the first time.
The molecule consists of eight rings with the orthoacetate group bridged at positions of 1, 8 and 9. The two five-carbocyclic rings A1 (C1, C2, C3, C4 and C29) and A2 (C1, C10, C5, C4 and C29) and the dioxlane ring G (C8, C9, O1, C1? and O2) adopt distorted envelope conformations [puckering parameters: q2 = 0.639 Å, φ2 = -132.24° for A1, q2 = 0.572 Å, φ2 = 164.56° for A2 and q2 = 0.440 Å,φ2 = 31.13° for G]. The 1,3-dioxane ring E (C1?, C10, C9, O1, C1 and O3) exists as a chair conformation [puckering parameters: Q = 0.636 Å, q = 133.17° and φ = 17.29°]. The six carbocyclic rings B (C1, C2, C30, C8, C9 and C10) and C (C8, C9, C11, C12, C13 and C14) appear as twisted boat conformations [puckering parameters: Q = 0.815 Å, θ = -28.92°, φ = 84.96° and Q = 0.767 Å, θ = 90.57°, φ = -151.34°, respectively]. The lactone ring is a half-chair conformation and the furan ring is planar. Rings A1/B, A2/B, B/C, C/D, C/G are all cis-fused. The two acetoxy groups attached to ring B are in equatorial positions. The furan ring is attached to the lactone ring in equatorial position, and it is inclined at 56.8 (1) ° with respect to the lactone ring.
The structure is devoid of any classical hydrogen bonds. However, non-classical intra- and intermolecular (Table 1) hydrogen-bonding interactions of the type C—H···O are present in the structure. The crystal structure contains solvent accessible voids of 688 Å3.This might indicate that the crystal lost its solvent molecules of crystallization without collapsing of the structure.