metal-organic compounds
Chlorido{N-[2-(diphenylphosphanyl)benzylidene]-2-(2-thienyl)ethanamine-κ2N,P}methylpalladium(II) dichloromethane hemisolvate
aUniversity of the Western Cape, Cape Town, Bellville 7535, South Africa, bUniversity of Johannesburg, Auckland Park Kingsway Campus, Johannesburg 2006, South Africa, and cDepartment of Chemistry, Rutgers State University, 73 Warren St, Newark, NJ 07102, USA
*Correspondence e-mail: monani@uwc.ac.za
In the title compound, [Pd(CH3)Cl(C25H22NPS)]·0.5C2H2Cl2, the PdII atom is coordinated by the N,P-bidentate ligand, a methyl group and a chloride ion, generating a distorted square-planar PdCClNS coordination geometry, with the N and Cl atoms trans. The thiophene ring is equally disordered over two orientations and the dichloromethane solvent molecule is disordered about an inversion centre.
Related literature
For metal-organic compounds with ligands containing both pyridyl and phosphine donor groups and for typical Pd—C, Pd—Cl, Pd—P and Pd—N bond lengths, see: Shaffer & Schmidt (2009). For the properties of related compounds, see: Tongwa et al. (2009); Jun-Gill et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810017824/hb5421sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810017824/hb5421Isup2.hkl
The iminophosphine heterocyclic ligand was prepared via the condensation reaction of 2-(diphenylphosphino)benzaldehyde with 2-thien-2-ylethanamine. The ligand was further refluxed with an equimolar Pd(cod)Cl2 in dichloromethane and gave over 80% yield of a yellow complex. Light-yellow blocks of (I) were grown via slow diffusion of a dichloromethane solution of the complex in hexane a 4
The solvent molecule dichloromethane exhibits high thermal motions and were refined isotropically with temperature factors in the range of 0.101 – 0.122. It is situated on the centre of inversion. Therefore only half of the molecule is in the
and it is modelled as a whole molecule with 50% site occupancy factor (s.o.f.). The 5 member ring was disordered and shows two preferred orientations each at 50% s.o.f.: the first ring C7, C8A, C9A, C10A and S1A (ring A) and the second ring C7, C8B, C9B, C10B and S1B (ring B). Ring A and ring B share two common atom sites at C7 and C10A (or C10B). C10A and C10B are on the same site and refined anisotropically with the same temperature factors. The maximum and minimum deviations from the least-squares planes of both rings are 0.086 (4) Å and -0.084 (3) Å for C7 and S1A in ring A, 0.095 (5) Å and -0.090 (3) Å for C7 and S1B in ring B. Angle from the least-square plane of ring A to that of ring B is 36.2 (3)o. All hydrogen atoms were positioned geometrically with C—H = 0.95 – 0.99 Å and refined as riding on their parent atoms with Uiso (H) = 1.2 - 1.5 Ueq (C).The following shortfalls have been scrutinized and corrected. 1. ABSTRACT usually does not contain the description of synthesis and crystal preparation, which should be included in _publ_section_exptl_prep section. ABSTRACT should not contain the
true2. _publ_section_exptl_prep section is missing.included
3. _publ_section_exptl_refinement section is missing, in which the treatment of H atoms should be given. rectified
4. _publ_section_figure_captions is missing. Avaialable
5. The solvent molecule in Scheme1 is incorrectly shown. rectified
6. References to published work must be cited in the correct format detailed in Notes for authors. sorted
7. Fig. 2 should show the cell-axis directions (labelled a, b, c) and the cell origin (labelled O). rectified
8. In
the software for data collection is SAINT, and that for cell and data reduction is DENZO-SMN; is it right?SAINT
Data collection: SMART (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. : The molecular structure of (I) showing 30% displacement ellipsoids (all hydrogen atoms omitted for clarity). The solvent dichloromethane molecule is excluded. |
[Pd(CH3)Cl(C25H22NPS)]·0.5C2H2Cl2 | F(000) = 1212 |
Mr = 598.81 | Dx = 1.548 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 31867 reflections |
a = 9.9960 (6) Å | θ = 2.2–28.3° |
b = 18.6584 (11) Å | µ = 1.09 mm−1 |
c = 13.8167 (8) Å | T = 173 K |
β = 94.517 (1)° | Needle, light-yellow |
V = 2568.9 (3) Å3 | 0.16 × 0.15 × 0.14 mm |
Z = 4 |
Bruker Kappa DUO APEXII CCD diffractometer | 6376 independent reflections |
Radiation source: fine-focus sealed tube | 5600 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
0.5° φ scans and ω scans | θmax = 28.3°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2006) | h = −13→13 |
Tmin = 0.683, Tmax = 0.746 | k = −24→24 |
31867 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.074 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0301P)2 + 3.2924P] where P = (Fo2 + 2Fc2)/3 |
6376 reflections | (Δ/σ)max = 0.002 |
321 parameters | Δρmax = 1.34 e Å−3 |
2 restraints | Δρmin = −1.04 e Å−3 |
[Pd(CH3)Cl(C25H22NPS)]·0.5C2H2Cl2 | V = 2568.9 (3) Å3 |
Mr = 598.81 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.9960 (6) Å | µ = 1.09 mm−1 |
b = 18.6584 (11) Å | T = 173 K |
c = 13.8167 (8) Å | 0.16 × 0.15 × 0.14 mm |
β = 94.517 (1)° |
Bruker Kappa DUO APEXII CCD diffractometer | 6376 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2006) | 5600 reflections with I > 2σ(I) |
Tmin = 0.683, Tmax = 0.746 | Rint = 0.028 |
31867 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 2 restraints |
wR(F2) = 0.074 | H-atom parameters constrained |
S = 1.03 | Δρmax = 1.34 e Å−3 |
6376 reflections | Δρmin = −1.04 e Å−3 |
321 parameters |
Experimental. Half sphere of data collected using SAINT strategy (Bruker, 2006). Crystal to detector distance = 50 mm; combination of φ and ω scans of 0.5°, 50 s per °, 2 iterations. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. The solvent molecule dichloromethane exhibits high thermal motions and were refined isotropically with temperature factors in the range of 0.101 C 0.122. It is modelled as a whole molecule with 50% s.o.f. The 5 member ring was disordered and shows two preferred orientations each at 50% s.o.f. All hydrogen atoms were positioned geometrically with C—H = 0.95 C 0.99 A and refined as riding on their parent atoms with Uiso (H) = 1.2 - 1.5 Ueq (C). Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Pd1 | 0.636610 (16) | 0.296906 (8) | 0.583217 (12) | 0.02079 (5) | |
Cl1 | 0.51346 (6) | 0.20048 (3) | 0.64253 (6) | 0.03899 (15) | |
Cl2A | 1.0260 (4) | 0.55967 (18) | 1.0814 (2) | 0.1066 (9)* | 0.50 |
Cl2B | 0.9080 (4) | 0.4537 (2) | 0.9486 (3) | 0.1223 (11)* | 0.50 |
S1A | 0.3721 (8) | 0.3256 (4) | 0.9098 (5) | 0.0464 (12) | 0.50 |
S1B | 0.3499 (8) | 0.3404 (4) | 0.8969 (6) | 0.0443 (12) | 0.50 |
P1 | 0.76594 (5) | 0.38331 (3) | 0.53464 (4) | 0.01817 (11) | |
N1 | 0.7551 (2) | 0.30566 (11) | 0.72019 (14) | 0.0289 (4) | |
C1 | 0.5273 (2) | 0.28695 (14) | 0.45247 (18) | 0.0316 (5) | |
H1A | 0.5795 | 0.2602 | 0.4074 | 0.047* | |
H1B | 0.5062 | 0.3347 | 0.4259 | 0.047* | |
H1C | 0.4438 | 0.2612 | 0.4615 | 0.047* | |
C2 | 0.9364 (2) | 0.34988 (11) | 0.56117 (16) | 0.0214 (4) | |
C3 | 0.9725 (2) | 0.31802 (13) | 0.65212 (17) | 0.0268 (5) | |
C4 | 0.8828 (3) | 0.31090 (14) | 0.73071 (18) | 0.0315 (5) | |
H4 | 0.9235 | 0.3101 | 0.7952 | 0.038* | |
C5 | 0.6819 (3) | 0.30364 (16) | 0.80910 (18) | 0.0374 (6) | |
H5A | 0.7465 | 0.3037 | 0.8672 | 0.045* | |
H5B | 0.6275 | 0.2594 | 0.8100 | 0.045* | |
C6 | 0.5910 (3) | 0.36912 (17) | 0.81044 (19) | 0.0402 (6) | |
H6A | 0.6467 | 0.4130 | 0.8089 | 0.048* | |
H6B | 0.5284 | 0.3689 | 0.7513 | 0.048* | |
C7 | 0.5115 (3) | 0.37153 (19) | 0.8982 (2) | 0.0455 (7) | |
C8A | 0.5216 (8) | 0.4289 (5) | 0.9701 (5) | 0.0549 (18) | 0.50 |
H8A | 0.5839 | 0.4674 | 0.9708 | 0.066* | 0.50 |
C8B | 0.5611 (7) | 0.3773 (5) | 0.9925 (5) | 0.059 (2) | 0.50 |
H8B | 0.6537 | 0.3845 | 1.0113 | 0.070* | 0.50 |
C9A | 0.4239 (8) | 0.4189 (5) | 1.0396 (5) | 0.0569 (19) | 0.50 |
H9A | 0.4164 | 0.4492 | 1.0942 | 0.068* | 0.50 |
C9B | 0.4608 (7) | 0.3717 (5) | 1.0608 (4) | 0.0522 (17) | 0.50 |
H9B | 0.4791 | 0.3767 | 1.1290 | 0.063* | 0.50 |
C10A | 0.3397 (3) | 0.35877 (19) | 1.0181 (2) | 0.0497 (8) | 0.50 |
H10A | 0.2753 | 0.3403 | 1.0586 | 0.060* | 0.50 |
C10B | 0.3397 (3) | 0.35877 (19) | 1.0181 (2) | 0.0497 (8) | 0.50 |
H10B | 0.2589 | 0.3595 | 1.0499 | 0.060* | 0.50 |
C11 | 1.0318 (2) | 0.35515 (12) | 0.49348 (17) | 0.0263 (5) | |
H11 | 1.0084 | 0.3770 | 0.4324 | 0.032* | |
C12 | 1.1615 (2) | 0.32884 (14) | 0.5141 (2) | 0.0323 (5) | |
H12 | 1.2250 | 0.3320 | 0.4666 | 0.039* | |
C13 | 1.1980 (3) | 0.29822 (14) | 0.6033 (2) | 0.0380 (6) | |
H13 | 1.2863 | 0.2803 | 0.6175 | 0.046* | |
C14 | 1.1042 (3) | 0.29394 (14) | 0.6720 (2) | 0.0358 (6) | |
H14 | 1.1301 | 0.2742 | 0.7340 | 0.043* | |
C15 | 0.7553 (2) | 0.46247 (11) | 0.61019 (15) | 0.0195 (4) | |
C16 | 0.8684 (2) | 0.49563 (12) | 0.65553 (16) | 0.0250 (4) | |
H16 | 0.9552 | 0.4770 | 0.6473 | 0.030* | |
C17 | 0.8542 (3) | 0.55604 (13) | 0.71283 (17) | 0.0306 (5) | |
H17 | 0.9313 | 0.5782 | 0.7444 | 0.037* | |
C18 | 0.7276 (3) | 0.58398 (13) | 0.72402 (17) | 0.0309 (5) | |
H18 | 0.7185 | 0.6258 | 0.7621 | 0.037* | |
C19 | 0.6147 (3) | 0.55098 (13) | 0.67984 (17) | 0.0300 (5) | |
H19 | 0.5281 | 0.5699 | 0.6883 | 0.036* | |
C20 | 0.6280 (2) | 0.49029 (12) | 0.62321 (16) | 0.0249 (4) | |
H20 | 0.5504 | 0.4676 | 0.5932 | 0.030* | |
C21 | 0.7591 (2) | 0.41830 (11) | 0.41116 (15) | 0.0203 (4) | |
C22 | 0.7452 (2) | 0.49174 (12) | 0.39294 (16) | 0.0243 (4) | |
H22 | 0.7424 | 0.5244 | 0.4455 | 0.029* | |
C23 | 0.7355 (3) | 0.51719 (13) | 0.29770 (17) | 0.0312 (5) | |
H23 | 0.7263 | 0.5671 | 0.2856 | 0.037* | |
C24 | 0.7393 (3) | 0.46996 (15) | 0.22089 (17) | 0.0328 (5) | |
H24 | 0.7310 | 0.4874 | 0.1561 | 0.039* | |
C25 | 0.7550 (3) | 0.39725 (15) | 0.23840 (17) | 0.0320 (5) | |
H25 | 0.7593 | 0.3650 | 0.1855 | 0.038* | |
C26 | 0.7644 (2) | 0.37123 (13) | 0.33299 (17) | 0.0268 (5) | |
H26 | 0.7744 | 0.3212 | 0.3445 | 0.032* | |
C27 | 0.9815 (11) | 0.5338 (5) | 0.9658 (6) | 0.101 (3)* | 0.50 |
H27A | 0.9199 | 0.5705 | 0.9358 | 0.121* | 0.50 |
H27B | 1.0632 | 0.5342 | 0.9297 | 0.121* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Pd1 | 0.01711 (8) | 0.01957 (8) | 0.02575 (9) | 0.00040 (6) | 0.00207 (6) | 0.00374 (6) |
Cl1 | 0.0251 (3) | 0.0310 (3) | 0.0611 (4) | −0.0026 (2) | 0.0048 (3) | 0.0200 (3) |
S1A | 0.058 (3) | 0.0360 (18) | 0.048 (3) | −0.0159 (16) | 0.022 (2) | −0.0098 (16) |
S1B | 0.0410 (17) | 0.061 (4) | 0.0305 (10) | −0.0139 (19) | 0.0016 (10) | 0.0018 (19) |
P1 | 0.0166 (2) | 0.0187 (2) | 0.0192 (2) | 0.00054 (19) | 0.00097 (18) | 0.00085 (19) |
N1 | 0.0272 (10) | 0.0343 (11) | 0.0252 (10) | 0.0028 (8) | 0.0030 (8) | 0.0106 (8) |
C1 | 0.0256 (11) | 0.0375 (13) | 0.0310 (12) | −0.0099 (10) | −0.0026 (9) | −0.0016 (10) |
C2 | 0.0186 (9) | 0.0199 (9) | 0.0257 (10) | 0.0007 (8) | 0.0004 (8) | −0.0008 (8) |
C3 | 0.0216 (11) | 0.0281 (11) | 0.0303 (12) | 0.0032 (9) | −0.0013 (9) | 0.0041 (9) |
C4 | 0.0290 (12) | 0.0395 (13) | 0.0254 (11) | 0.0054 (10) | −0.0024 (9) | 0.0104 (10) |
C5 | 0.0343 (13) | 0.0532 (16) | 0.0253 (12) | 0.0016 (12) | 0.0052 (10) | 0.0140 (11) |
C6 | 0.0427 (15) | 0.0537 (17) | 0.0254 (12) | 0.0045 (13) | 0.0099 (11) | 0.0064 (11) |
C7 | 0.0359 (14) | 0.074 (2) | 0.0269 (13) | −0.0073 (14) | 0.0076 (11) | −0.0028 (13) |
C8A | 0.054 (4) | 0.072 (5) | 0.042 (4) | −0.028 (4) | 0.018 (3) | −0.014 (3) |
C8B | 0.032 (3) | 0.114 (7) | 0.031 (3) | −0.017 (4) | 0.010 (2) | −0.018 (4) |
C9A | 0.065 (5) | 0.075 (5) | 0.034 (3) | −0.019 (4) | 0.022 (3) | −0.016 (3) |
C9B | 0.045 (4) | 0.089 (6) | 0.024 (3) | −0.014 (4) | 0.010 (2) | −0.010 (3) |
C10A | 0.0469 (17) | 0.067 (2) | 0.0378 (15) | −0.0110 (15) | 0.0179 (13) | −0.0025 (14) |
C10B | 0.0469 (17) | 0.067 (2) | 0.0378 (15) | −0.0110 (15) | 0.0179 (13) | −0.0025 (14) |
C11 | 0.0225 (11) | 0.0270 (11) | 0.0295 (11) | 0.0006 (9) | 0.0025 (9) | −0.0015 (9) |
C12 | 0.0209 (11) | 0.0333 (12) | 0.0434 (14) | 0.0029 (9) | 0.0072 (10) | −0.0065 (11) |
C13 | 0.0214 (11) | 0.0363 (13) | 0.0559 (17) | 0.0080 (10) | −0.0001 (11) | 0.0021 (12) |
C14 | 0.0263 (12) | 0.0386 (14) | 0.0413 (14) | 0.0075 (10) | −0.0057 (10) | 0.0095 (11) |
C15 | 0.0212 (10) | 0.0198 (9) | 0.0178 (9) | −0.0001 (8) | 0.0030 (7) | 0.0008 (7) |
C16 | 0.0220 (10) | 0.0264 (11) | 0.0265 (11) | −0.0005 (8) | 0.0025 (8) | −0.0032 (9) |
C17 | 0.0325 (12) | 0.0308 (12) | 0.0285 (12) | −0.0069 (10) | 0.0022 (9) | −0.0070 (9) |
C18 | 0.0439 (14) | 0.0256 (11) | 0.0246 (11) | −0.0011 (10) | 0.0107 (10) | −0.0051 (9) |
C19 | 0.0307 (12) | 0.0294 (11) | 0.0310 (12) | 0.0074 (10) | 0.0097 (10) | −0.0001 (9) |
C20 | 0.0211 (10) | 0.0277 (11) | 0.0261 (11) | 0.0021 (8) | 0.0029 (8) | 0.0011 (9) |
C21 | 0.0165 (9) | 0.0240 (10) | 0.0204 (10) | 0.0002 (8) | 0.0012 (7) | 0.0012 (8) |
C22 | 0.0262 (11) | 0.0237 (10) | 0.0228 (10) | −0.0029 (8) | 0.0009 (8) | 0.0007 (8) |
C23 | 0.0344 (13) | 0.0294 (12) | 0.0295 (12) | −0.0015 (10) | 0.0008 (10) | 0.0079 (9) |
C24 | 0.0313 (12) | 0.0450 (14) | 0.0224 (11) | 0.0006 (11) | 0.0041 (9) | 0.0051 (10) |
C25 | 0.0310 (12) | 0.0434 (14) | 0.0219 (11) | 0.0052 (11) | 0.0032 (9) | −0.0050 (10) |
C26 | 0.0258 (11) | 0.0279 (11) | 0.0267 (11) | 0.0052 (9) | 0.0027 (9) | −0.0022 (9) |
Pd1—C1 | 2.045 (2) | C9A—H9A | 0.9500 |
Pd1—N1 | 2.158 (2) | C9B—H9B | 0.9500 |
Pd1—P1 | 2.2039 (6) | C10A—H10A | 0.9500 |
Pd1—Cl1 | 2.3628 (6) | C11—C12 | 1.394 (3) |
Cl2A—C27 | 1.695 (7) | C11—H11 | 0.9500 |
Cl2B—C27 | 1.673 (8) | C12—C13 | 1.381 (4) |
S1A—C7 | 1.655 (9) | C12—H12 | 0.9500 |
S1A—C10A | 1.673 (9) | C13—C14 | 1.388 (4) |
S1B—C7 | 1.715 (9) | C13—H13 | 0.9500 |
P1—C15 | 1.817 (2) | C14—H14 | 0.9500 |
P1—C21 | 1.823 (2) | C15—C16 | 1.394 (3) |
P1—C2 | 1.825 (2) | C15—C20 | 1.398 (3) |
N1—C4 | 1.278 (3) | C16—C17 | 1.391 (3) |
N1—C5 | 1.479 (3) | C16—H16 | 0.9500 |
C1—H1A | 0.9800 | C17—C18 | 1.388 (4) |
C1—H1B | 0.9800 | C17—H17 | 0.9500 |
C1—H1C | 0.9800 | C18—C19 | 1.384 (4) |
C2—C11 | 1.391 (3) | C18—H18 | 0.9500 |
C2—C3 | 1.411 (3) | C19—C20 | 1.389 (3) |
C3—C14 | 1.397 (3) | C19—H19 | 0.9500 |
C3—C4 | 1.467 (3) | C20—H20 | 0.9500 |
C4—H4 | 0.9500 | C21—C26 | 1.396 (3) |
C5—C6 | 1.523 (4) | C21—C22 | 1.398 (3) |
C5—H5A | 0.9900 | C22—C23 | 1.395 (3) |
C5—H5B | 0.9900 | C22—H22 | 0.9500 |
C6—C7 | 1.502 (4) | C23—C24 | 1.382 (4) |
C6—H6A | 0.9900 | C23—H23 | 0.9500 |
C6—H6B | 0.9900 | C24—C25 | 1.385 (4) |
C7—C8B | 1.362 (7) | C24—H24 | 0.9500 |
C7—C8A | 1.459 (8) | C25—C26 | 1.390 (3) |
C8A—C9A | 1.434 (9) | C25—H25 | 0.9500 |
C8A—H8A | 0.9500 | C26—H26 | 0.9500 |
C8B—C9B | 1.434 (8) | C27—H27A | 0.9900 |
C8B—H8B | 0.9500 | C27—H27B | 0.9900 |
C9A—C10A | 1.420 (8) | ||
C1—Pd1—N1 | 178.73 (9) | C10A—C9A—H9A | 123.7 |
C1—Pd1—P1 | 94.76 (7) | C8A—C9A—H9A | 123.7 |
N1—Pd1—P1 | 85.25 (6) | C8B—C9B—H9B | 123.8 |
C1—Pd1—Cl1 | 88.88 (7) | C9A—C10A—S1A | 109.1 (4) |
N1—Pd1—Cl1 | 91.05 (6) | C9A—C10A—H10A | 125.5 |
P1—Pd1—Cl1 | 175.36 (2) | S1A—C10A—H10A | 125.5 |
C7—S1A—C10A | 96.8 (4) | C2—C11—C12 | 120.9 (2) |
C15—P1—C21 | 104.30 (10) | C2—C11—H11 | 119.6 |
C15—P1—C2 | 104.99 (10) | C12—C11—H11 | 119.6 |
C21—P1—C2 | 106.03 (10) | C13—C12—C11 | 120.3 (2) |
C15—P1—Pd1 | 110.94 (7) | C13—C12—H12 | 119.9 |
C21—P1—Pd1 | 124.56 (7) | C11—C12—H12 | 119.9 |
C2—P1—Pd1 | 104.47 (7) | C12—C13—C14 | 119.3 (2) |
C4—N1—C5 | 117.6 (2) | C12—C13—H13 | 120.4 |
C4—N1—Pd1 | 125.45 (17) | C14—C13—H13 | 120.4 |
C5—N1—Pd1 | 116.96 (16) | C13—C14—C3 | 121.6 (2) |
Pd1—C1—H1A | 109.5 | C13—C14—H14 | 119.2 |
Pd1—C1—H1B | 109.5 | C3—C14—H14 | 119.2 |
H1A—C1—H1B | 109.5 | C16—C15—C20 | 119.4 (2) |
Pd1—C1—H1C | 109.5 | C16—C15—P1 | 122.46 (16) |
H1A—C1—H1C | 109.5 | C20—C15—P1 | 118.09 (16) |
H1B—C1—H1C | 109.5 | C17—C16—C15 | 120.0 (2) |
C11—C2—C3 | 119.2 (2) | C17—C16—H16 | 120.0 |
C11—C2—P1 | 121.32 (17) | C15—C16—H16 | 120.0 |
C3—C2—P1 | 119.46 (17) | C18—C17—C16 | 120.2 (2) |
C14—C3—C2 | 118.7 (2) | C18—C17—H17 | 119.9 |
C14—C3—C4 | 116.5 (2) | C16—C17—H17 | 119.9 |
C2—C3—C4 | 124.7 (2) | C19—C18—C17 | 120.2 (2) |
N1—C4—C3 | 125.9 (2) | C19—C18—H18 | 119.9 |
N1—C4—H4 | 117.1 | C17—C18—H18 | 119.9 |
C3—C4—H4 | 117.1 | C18—C19—C20 | 120.0 (2) |
N1—C5—C6 | 108.9 (2) | C18—C19—H19 | 120.0 |
N1—C5—H5A | 109.9 | C20—C19—H19 | 120.0 |
C6—C5—H5A | 109.9 | C19—C20—C15 | 120.2 (2) |
N1—C5—H5B | 109.9 | C19—C20—H20 | 119.9 |
C6—C5—H5B | 109.9 | C15—C20—H20 | 119.9 |
H5A—C5—H5B | 108.3 | C26—C21—C22 | 119.1 (2) |
C7—C6—C5 | 112.8 (2) | C26—C21—P1 | 119.85 (17) |
C7—C6—H6A | 109.0 | C22—C21—P1 | 121.03 (16) |
C5—C6—H6A | 109.0 | C23—C22—C21 | 120.1 (2) |
C7—C6—H6B | 109.0 | C23—C22—H22 | 119.9 |
C5—C6—H6B | 109.0 | C21—C22—H22 | 119.9 |
H6A—C6—H6B | 107.8 | C24—C23—C22 | 120.2 (2) |
C8B—C7—C8A | 44.7 (4) | C24—C23—H23 | 119.9 |
C8B—C7—C6 | 126.8 (4) | C22—C23—H23 | 119.9 |
C8A—C7—C6 | 124.0 (4) | C23—C24—C25 | 120.0 (2) |
C8B—C7—S1A | 101.2 (4) | C23—C24—H24 | 120.0 |
C8A—C7—S1A | 109.1 (4) | C25—C24—H24 | 120.0 |
C6—C7—S1A | 124.5 (4) | C24—C25—C26 | 120.3 (2) |
C8B—C7—S1B | 108.0 (4) | C24—C25—H25 | 119.8 |
C8A—C7—S1B | 105.6 (4) | C26—C25—H25 | 119.8 |
C6—C7—S1B | 122.7 (4) | C25—C26—C21 | 120.2 (2) |
S1A—C7—S1B | 13.1 (3) | C25—C26—H26 | 119.9 |
C9A—C8A—C7 | 110.3 (6) | C21—C26—H26 | 119.9 |
C9A—C8A—H8A | 124.8 | Cl2B—C27—Cl2A | 117.9 (6) |
C7—C8A—H8A | 124.8 | Cl2B—C27—H27A | 107.8 |
C7—C8B—C9B | 113.8 (5) | Cl2A—C27—H27A | 107.8 |
C7—C8B—H8B | 123.1 | Cl2B—C27—H27B | 107.8 |
C9B—C8B—H8B | 123.1 | Cl2A—C27—H27B | 107.8 |
C10A—C9A—C8A | 112.7 (6) | H27A—C27—H27B | 107.2 |
C1—Pd1—P1—C15 | 122.52 (11) | S1B—C7—C8A—C9A | 24.7 (8) |
N1—Pd1—P1—C15 | −58.75 (9) | C8A—C7—C8B—C9B | 81.6 (9) |
Cl1—Pd1—P1—C15 | −96.0 (3) | C6—C7—C8B—C9B | −174.7 (6) |
C1—Pd1—P1—C21 | −3.25 (11) | S1A—C7—C8B—C9B | −24.3 (9) |
N1—Pd1—P1—C21 | 175.47 (10) | S1B—C7—C8B—C9B | −12.7 (10) |
Cl1—Pd1—P1—C21 | 138.3 (3) | C7—C8A—C9A—C10A | −2.9 (10) |
C1—Pd1—P1—C2 | −124.85 (11) | C8A—C9A—C10A—S1A | −6.9 (9) |
N1—Pd1—P1—C2 | 53.87 (9) | C7—S1A—C10A—C9A | 12.1 (6) |
Cl1—Pd1—P1—C2 | 16.7 (3) | C3—C2—C11—C12 | 0.6 (3) |
C1—Pd1—N1—C4 | 46 (4) | P1—C2—C11—C12 | −179.39 (18) |
P1—Pd1—N1—C4 | −44.6 (2) | C2—C11—C12—C13 | −1.2 (4) |
Cl1—Pd1—N1—C4 | 132.6 (2) | C11—C12—C13—C14 | 0.0 (4) |
C1—Pd1—N1—C5 | −133 (4) | C12—C13—C14—C3 | 1.9 (4) |
P1—Pd1—N1—C5 | 136.99 (18) | C2—C3—C14—C13 | −2.5 (4) |
Cl1—Pd1—N1—C5 | −45.81 (17) | C4—C3—C14—C13 | −179.8 (2) |
C15—P1—C2—C11 | −109.01 (19) | C21—P1—C15—C16 | −96.92 (19) |
C21—P1—C2—C11 | 1.0 (2) | C2—P1—C15—C16 | 14.4 (2) |
Pd1—P1—C2—C11 | 134.17 (17) | Pd1—P1—C15—C16 | 126.67 (17) |
C15—P1—C2—C3 | 70.99 (19) | C21—P1—C15—C20 | 83.53 (18) |
C21—P1—C2—C3 | −178.95 (18) | C2—P1—C15—C20 | −165.18 (17) |
Pd1—P1—C2—C3 | −45.83 (19) | Pd1—P1—C15—C20 | −52.88 (18) |
C11—C2—C3—C14 | 1.2 (3) | C20—C15—C16—C17 | −0.3 (3) |
P1—C2—C3—C14 | −178.79 (19) | P1—C15—C16—C17 | −179.81 (18) |
C11—C2—C3—C4 | 178.3 (2) | C15—C16—C17—C18 | −0.8 (4) |
P1—C2—C3—C4 | −1.7 (3) | C16—C17—C18—C19 | 1.3 (4) |
C5—N1—C4—C3 | −176.1 (2) | C17—C18—C19—C20 | −0.8 (4) |
Pd1—N1—C4—C3 | 5.4 (4) | C18—C19—C20—C15 | −0.3 (4) |
C14—C3—C4—N1 | −154.4 (3) | C16—C15—C20—C19 | 0.8 (3) |
C2—C3—C4—N1 | 28.5 (4) | P1—C15—C20—C19 | −179.61 (17) |
C4—N1—C5—C6 | 116.9 (3) | C15—P1—C21—C26 | −179.72 (17) |
Pd1—N1—C5—C6 | −64.6 (3) | C2—P1—C21—C26 | 69.74 (19) |
N1—C5—C6—C7 | 179.6 (2) | Pd1—P1—C21—C26 | −51.2 (2) |
C5—C6—C7—C8B | 63.5 (7) | C15—P1—C21—C22 | −1.3 (2) |
C5—C6—C7—C8A | 119.0 (5) | C2—P1—C21—C22 | −111.86 (18) |
C5—C6—C7—S1A | −80.4 (4) | Pd1—P1—C21—C22 | 127.25 (16) |
C5—C6—C7—S1B | −96.0 (4) | C26—C21—C22—C23 | 0.6 (3) |
C10A—S1A—C7—C8B | 32.0 (5) | P1—C21—C22—C23 | −177.78 (18) |
C10A—S1A—C7—C8A | −13.7 (5) | C21—C22—C23—C24 | 0.1 (4) |
C10A—S1A—C7—C6 | −176.8 (3) | C22—C23—C24—C25 | −1.1 (4) |
C10A—S1A—C7—S1B | −90 (3) | C23—C24—C25—C26 | 1.3 (4) |
C8B—C7—C8A—C9A | −75.3 (8) | C24—C25—C26—C21 | −0.5 (4) |
C6—C7—C8A—C9A | 174.6 (6) | C22—C21—C26—C25 | −0.5 (3) |
S1A—C7—C8A—C9A | 11.4 (8) | P1—C21—C26—C25 | 177.97 (18) |
Experimental details
Crystal data | |
Chemical formula | [Pd(CH3)Cl(C25H22NPS)]·0.5C2H2Cl2 |
Mr | 598.81 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 173 |
a, b, c (Å) | 9.9960 (6), 18.6584 (11), 13.8167 (8) |
β (°) | 94.517 (1) |
V (Å3) | 2568.9 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.09 |
Crystal size (mm) | 0.16 × 0.15 × 0.14 |
Data collection | |
Diffractometer | Bruker Kappa DUO APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2006) |
Tmin, Tmax | 0.683, 0.746 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31867, 6376, 5600 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.074, 1.03 |
No. of reflections | 6376 |
No. of parameters | 321 |
No. of restraints | 2 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.34, −1.04 |
Computer programs: SMART (Bruker, 2006), SAINT (Bruker, 2006), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001).
Acknowledgements
We acknowledge the University of the Western Cape and the Ministry of Health of Botswana (WMM) for funding.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The stucture of the title compound, (I), is shown below. Dimensions are available in the archived CIF. The solvent molecule dichloromethane exhibits high thermal motions and were refined isotropically with temperature factors in the range of 0.101 – 0.122. It is situated close to a centre of inversion. The five-membered ring was disordered and shows two orientations each at 50% s.o.f.: the first ring C7, C8A, C9A, C10A and S1A (ring A) and the second ring C7, C8B, C9B, C10B and S1B (ring B). Ring A and ring B share two common atom sites at C7 and C10A (or C10B). C10A and C10B are on the same site and refined anisotropically with the same temperature factors. The maximum and minimum deviations from the least-squares planes of both rings are 0.086 (4) Å and -0.084 (3) Å for C7 and S1A in ring A, 0.095 (5) Å and -0.090 (3) Å for C7 and S1B in ring B. Angle from the least-square plane of ring A to that of ring B is 36.2 (3)°.