organic compounds
(E)-1-[1-(6-Bromo-2-oxo-2H-chromen-3-yl)ethylidene]thiosemicarbazide
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bSchool of Pharmaceutical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and cX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
The title compound, C12H10BrN3O2S, exists in an E configuration with respect to the C=N bond. The approximately planar 2H-chromene ring system [maximum deviation = 0.059 (1) Å] is inclined at a dihedral angle of 17.50 (5)° with respect to the mean plane through the thiosemicarbazide unit and an intramolecular N—H⋯N hydrogen bond generates an S(5) ring. In the adjacent molecules are linked by N—H⋯S hydrogen bonds, forming [010] chains built up from R22(8) loops, such that each S atom accepts two such bonds. These chains are further interconnected into sheets parallel to the ab plane via short Br⋯O interactions [3.0732 (13) Å] and a π–π aromatic stacking interaction [3.7870 (8) Å] is also observed.
Related literature
For general background to and applications of the title thiosemicarbazide compound, see: Anderson et al. (2002); Chulian et al. (2009); Desai et al. (1984); Finn et al. (2004); Hofmanová et al. (1998); Hoult & Payá (1996); Kimura et al. (1985); Laffitte et al. (2002); Mitscher (2002); Moffett (1964); Pillai et al. (1999); Shukla et al. (1984); Tassies et al. (2002); Weber et al. (1998). For the preparation, see: Moamen et al. (2009). For graph-set descriptions of hydrogen-bond ring motifs, see: Bernstein et al. (1995). For a related structure, see: Arshad et al. (2010). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810019240/hb5461sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810019240/hb5461Isup2.hkl
Coumarin thiosemicarbazone was prepared by cyclocondensation of 5-bromosalicylaldehyde with ethylacetoacetate and the resulting acetyl coumarin intermediate was then treated with thiosemicarbazide to get the title compound as reported in the literature with some modifications (Moamen et al., 2009). The methanol solution of thiosemicarbazide (5.00 mmol) was added to a solution of 6-bromo-(3-acethylcoumarin) (5.00 mmol) in hot methanol (10 ml) while stirring. The resulting solution was refluxed for 1 h and then pH of the solution was adjusted to 4–5 by adding glacial acetic acid. The solution was again refluxed for 4 h. The title compound was recrystallized from ethyl acetate:ethanol (2:1) to give yellow needles of (I).
H atoms bound to N atoms were located from difference Fourier map and allowed to refine freely [range of N—H = 0.73 (3)–0.82 (3) Å]. All other H atoms were placed in their calculated positions, with C—H = 0.93 or 0.96 Å, and refined using a riding model, with Uiso = 1.2 or 1.5 Ueq(C). A rotating group model was used for the C12 methyl group.
Thiosemicarbazide compounds exhibit various biological activities such as anti-bacterial, anti-fungal and especially anti-tuberculosis (Shukla et al., 1984, Desai et al., 1984). Apart from this,
constitute an important class of compounds found throughout the plant kingdom and are known to have diverse activities such as anti-coagulants (Anderson et al., 2002, Tassies et al., 2002), anti-bacterial (Mitscher, 2002, Laffitte et al., 2002), anti-fungal (Moffett, 1964) and cytotoxicity (Weber et al., 1998) properties. The coumarin moiety and related derivatives are also reported to have importance as vasodilators (Hoult & Payá, 1996), anti-mutagenic agents (Pillai et al., 1999), scavengers of reactive oxygen species (Finn et al., 2004), as well as lipoxygenese and cyclooxygenese inhibitors (Kimura et al., 1985, Hofmanová et al., 1998). The title compound exhibits very good anti-bacterial activity against Escherichia coli and Bacillus. subtilus (Chulian et al., 2009). The objective of this study is to synthesize new derivatives of coumarin-thiosemicarbazide compounds. We present in this paper the of this title compound.The title thiosemicarbazide compound (Fig. 1) exists in a cis configuration with respect to the Schiff base C10═N1 bond [N1═C10 = 1.2890 (15) Å; torsion angle C9–C10–N1–N2 = 178.83 (10)°]. The 2H-chromene ring system (C1-C9/O1) is approximately planar, with a maximum deviation of 0.059 (1) Å at atom C9. The mean plane through the thiosemicarbazide moiety (N1/N2/C11/N3/S1) forms dihedral angle of 17.50 (5)° with the 2H-chromene ring system. Bond lengths and angles are consistent to a closely related structure (Arshad et al., 2010).
In the
pairs of intermolecular N2—H1N2···S1 and N3—H1N3···S1 hydrogen bonds (Table 1) form bifurcated acceptor hydrogen bonds which generate two different R22(8) hydrogen bond ring motifs with zig-zag formation (Fig. 2, Bernstein et al., 1995). These hydrogen bonds link adjacent molecules into two-molecule wide chains along the b axis. Intermolecular short Br···O interactions [Br1···O2iii = 3.0732 (13) Å; (iii) x+1, y-1, z] interconnect these chains into two-dimensional planes parallel to the ab plane (Fig. 3). The is further stabilized by weak Cg1···Cg1 interactions involving the centroid of the C2-C7 benzene ring [Cg1···Cg1iv = 3.7870 (8) Å; (iv) -x+1, -y, -z].For general background to and applications of the title thiosemicarbazide compound, see: Anderson et al. (2002); Chulian et al. (2009); Desai et al. (1984); Finn et al. (2004); Hofmanová et al. (1998); Hoult et al. (1996); Kimura et al. (1985); Laffitte et al. (2002); Mitscher (2002); Moffett (1964); Pillai et al. (1999); Shukla et al. (1984); Tassies et al. (2002); Weber et al. (1998). For the preparation, see: Moamen et al. (2009). For graph-set descriptions of hydrogen-bond ring motifs, see: Bernstein et al. (1995). For a related structure, see: Arshad et al. (2010). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C12H10BrN3O2S | Z = 2 |
Mr = 340.20 | F(000) = 340 |
Triclinic, P1 | Dx = 1.739 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.3796 (6) Å | Cell parameters from 9969 reflections |
b = 8.1260 (7) Å | θ = 2.7–35.1° |
c = 13.3756 (12) Å | µ = 3.33 mm−1 |
α = 106.697 (2)° | T = 100 K |
β = 95.095 (2)° | Needle, yellow |
γ = 98.925 (2)° | 0.73 × 0.20 × 0.15 mm |
V = 649.57 (10) Å3 |
Bruker APEXII DUO CCD diffractometer | 5036 independent reflections |
Radiation source: fine-focus sealed tube | 4733 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
φ and ω scans | θmax = 33.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −9→9 |
Tmin = 0.196, Tmax = 0.637 | k = −12→12 |
19355 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.021 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.17 | w = 1/[σ2(Fo2) + (0.0569P)2 + 0.0443P] where P = (Fo2 + 2Fc2)/3 |
5036 reflections | (Δ/σ)max = 0.001 |
185 parameters | Δρmax = 0.73 e Å−3 |
0 restraints | Δρmin = −0.56 e Å−3 |
C12H10BrN3O2S | γ = 98.925 (2)° |
Mr = 340.20 | V = 649.57 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.3796 (6) Å | Mo Kα radiation |
b = 8.1260 (7) Å | µ = 3.33 mm−1 |
c = 13.3756 (12) Å | T = 100 K |
α = 106.697 (2)° | 0.73 × 0.20 × 0.15 mm |
β = 95.095 (2)° |
Bruker APEXII DUO CCD diffractometer | 5036 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4733 reflections with I > 2σ(I) |
Tmin = 0.196, Tmax = 0.637 | Rint = 0.020 |
19355 measured reflections |
R[F2 > 2σ(F2)] = 0.021 | 0 restraints |
wR(F2) = 0.084 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.17 | Δρmax = 0.73 e Å−3 |
5036 reflections | Δρmin = −0.56 e Å−3 |
185 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.831903 (19) | −0.130575 (15) | 0.134917 (9) | 0.01986 (5) | |
S1 | −0.52737 (6) | 0.26734 (4) | 0.52668 (3) | 0.02208 (7) | |
O1 | 0.39540 (15) | 0.46915 (12) | 0.12143 (7) | 0.01830 (16) | |
O2 | 0.14155 (19) | 0.62282 (15) | 0.15561 (9) | 0.0270 (2) | |
N1 | −0.08889 (17) | 0.33908 (13) | 0.34997 (8) | 0.01559 (17) | |
N2 | −0.24110 (18) | 0.37175 (14) | 0.41584 (8) | 0.01611 (17) | |
N3 | −0.2610 (2) | 0.08895 (15) | 0.41915 (9) | 0.0204 (2) | |
C1 | 0.2259 (2) | 0.50976 (16) | 0.17462 (10) | 0.0177 (2) | |
C2 | 0.48940 (19) | 0.32942 (15) | 0.12434 (9) | 0.01509 (18) | |
C3 | 0.6564 (2) | 0.29964 (17) | 0.06532 (10) | 0.0179 (2) | |
H3A | 0.7011 | 0.3720 | 0.0255 | 0.022* | |
C4 | 0.75479 (19) | 0.15951 (17) | 0.06722 (9) | 0.0178 (2) | |
H4A | 0.8675 | 0.1375 | 0.0288 | 0.021* | |
C5 | 0.68424 (19) | 0.05161 (16) | 0.12688 (9) | 0.01630 (19) | |
C6 | 0.51529 (19) | 0.07869 (15) | 0.18374 (9) | 0.01632 (19) | |
H6A | 0.4670 | 0.0031 | 0.2210 | 0.020* | |
C7 | 0.41777 (18) | 0.22285 (15) | 0.18420 (9) | 0.01446 (18) | |
C8 | 0.25545 (18) | 0.27089 (15) | 0.24813 (9) | 0.01512 (18) | |
H8A | 0.2113 | 0.2048 | 0.2915 | 0.018* | |
C9 | 0.16407 (18) | 0.41112 (15) | 0.24698 (9) | 0.01454 (18) | |
C10 | −0.00056 (18) | 0.46198 (15) | 0.31560 (9) | 0.01494 (18) | |
C11 | −0.33190 (19) | 0.23856 (15) | 0.44883 (9) | 0.01633 (19) | |
C12 | −0.0508 (2) | 0.64307 (16) | 0.34349 (10) | 0.0196 (2) | |
H12A | −0.0674 | 0.6814 | 0.4167 | 0.029* | |
H12B | −0.1814 | 0.6417 | 0.3013 | 0.029* | |
H12C | 0.0641 | 0.7218 | 0.3302 | 0.029* | |
H1N2 | −0.308 (5) | 0.438 (4) | 0.420 (3) | 0.060 (9)* | |
H1N3 | −0.317 (3) | 0.005 (3) | 0.4346 (16) | 0.019 (4)* | |
H2N3 | −0.164 (5) | 0.094 (4) | 0.383 (3) | 0.057 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.02111 (7) | 0.01997 (7) | 0.02278 (7) | 0.01169 (5) | 0.00823 (5) | 0.00757 (5) |
S1 | 0.02734 (16) | 0.01628 (13) | 0.03123 (16) | 0.01088 (11) | 0.02016 (13) | 0.01232 (11) |
O1 | 0.0205 (4) | 0.0197 (4) | 0.0223 (4) | 0.0104 (3) | 0.0121 (3) | 0.0121 (3) |
O2 | 0.0334 (5) | 0.0302 (5) | 0.0330 (5) | 0.0205 (4) | 0.0192 (4) | 0.0220 (4) |
N1 | 0.0174 (4) | 0.0165 (4) | 0.0162 (4) | 0.0071 (3) | 0.0086 (3) | 0.0062 (3) |
N2 | 0.0191 (4) | 0.0145 (4) | 0.0197 (4) | 0.0078 (3) | 0.0116 (3) | 0.0078 (3) |
N3 | 0.0264 (5) | 0.0157 (4) | 0.0259 (5) | 0.0104 (4) | 0.0158 (4) | 0.0099 (4) |
C1 | 0.0197 (5) | 0.0189 (5) | 0.0199 (5) | 0.0086 (4) | 0.0097 (4) | 0.0096 (4) |
C2 | 0.0157 (4) | 0.0162 (4) | 0.0162 (4) | 0.0063 (4) | 0.0057 (3) | 0.0066 (4) |
C3 | 0.0181 (5) | 0.0216 (5) | 0.0186 (5) | 0.0077 (4) | 0.0089 (4) | 0.0092 (4) |
C4 | 0.0166 (5) | 0.0219 (5) | 0.0176 (5) | 0.0078 (4) | 0.0075 (4) | 0.0063 (4) |
C5 | 0.0164 (4) | 0.0176 (5) | 0.0172 (4) | 0.0084 (4) | 0.0054 (4) | 0.0053 (4) |
C6 | 0.0173 (5) | 0.0163 (4) | 0.0186 (5) | 0.0071 (4) | 0.0068 (4) | 0.0069 (4) |
C7 | 0.0154 (4) | 0.0149 (4) | 0.0154 (4) | 0.0055 (3) | 0.0058 (3) | 0.0058 (3) |
C8 | 0.0158 (4) | 0.0155 (4) | 0.0171 (4) | 0.0060 (4) | 0.0068 (4) | 0.0069 (4) |
C9 | 0.0158 (4) | 0.0152 (4) | 0.0156 (4) | 0.0059 (3) | 0.0068 (3) | 0.0064 (3) |
C10 | 0.0155 (4) | 0.0155 (4) | 0.0167 (4) | 0.0061 (4) | 0.0065 (4) | 0.0065 (3) |
C11 | 0.0198 (5) | 0.0146 (4) | 0.0184 (5) | 0.0068 (4) | 0.0090 (4) | 0.0072 (4) |
C12 | 0.0234 (5) | 0.0159 (5) | 0.0248 (5) | 0.0092 (4) | 0.0121 (4) | 0.0090 (4) |
Br1—C5 | 1.8965 (11) | C3—C4 | 1.3879 (17) |
S1—C11 | 1.6957 (12) | C3—H3A | 0.9300 |
O1—C2 | 1.3722 (14) | C4—C5 | 1.3969 (17) |
O1—C1 | 1.3770 (14) | C4—H4A | 0.9300 |
O2—C1 | 1.2091 (15) | C5—C6 | 1.3827 (16) |
N1—C10 | 1.2890 (15) | C6—C7 | 1.4079 (15) |
N1—N2 | 1.3738 (14) | C6—H6A | 0.9300 |
N2—C11 | 1.3516 (15) | C7—C8 | 1.4307 (16) |
N2—H1N2 | 0.73 (3) | C8—C9 | 1.3613 (15) |
N3—C11 | 1.3288 (15) | C8—H8A | 0.9300 |
N3—H1N3 | 0.81 (2) | C9—C10 | 1.4846 (16) |
N3—H2N3 | 0.82 (3) | C10—C12 | 1.5033 (16) |
C1—C9 | 1.4665 (16) | C12—H12A | 0.9600 |
C2—C3 | 1.3917 (16) | C12—H12B | 0.9600 |
C2—C7 | 1.3930 (15) | C12—H12C | 0.9600 |
C2—O1—C1 | 122.75 (9) | C5—C6—H6A | 120.6 |
C10—N1—N2 | 119.10 (10) | C7—C6—H6A | 120.6 |
C11—N2—N1 | 117.19 (10) | C2—C7—C6 | 118.95 (10) |
C11—N2—H1N2 | 111 (3) | C2—C7—C8 | 118.13 (10) |
N1—N2—H1N2 | 128 (3) | C6—C7—C8 | 122.83 (10) |
C11—N3—H1N3 | 119.9 (15) | C9—C8—C7 | 121.52 (10) |
C11—N3—H2N3 | 112 (2) | C9—C8—H8A | 119.2 |
H1N3—N3—H2N3 | 128 (3) | C7—C8—H8A | 119.2 |
O2—C1—O1 | 116.08 (11) | C8—C9—C1 | 119.13 (10) |
O2—C1—C9 | 126.61 (11) | C8—C9—C10 | 120.96 (10) |
O1—C1—C9 | 117.31 (10) | C1—C9—C10 | 119.90 (10) |
O1—C2—C3 | 117.34 (10) | N1—C10—C9 | 113.79 (10) |
O1—C2—C7 | 120.50 (10) | N1—C10—C12 | 124.38 (10) |
C3—C2—C7 | 122.16 (10) | C9—C10—C12 | 121.81 (10) |
C4—C3—C2 | 118.48 (11) | N3—C11—N2 | 117.80 (11) |
C4—C3—H3A | 120.8 | N3—C11—S1 | 122.45 (9) |
C2—C3—H3A | 120.8 | N2—C11—S1 | 119.74 (9) |
C3—C4—C5 | 119.89 (10) | C10—C12—H12A | 109.5 |
C3—C4—H4A | 120.1 | C10—C12—H12B | 109.5 |
C5—C4—H4A | 120.1 | H12A—C12—H12B | 109.5 |
C6—C5—C4 | 121.73 (10) | C10—C12—H12C | 109.5 |
C6—C5—Br1 | 119.11 (9) | H12A—C12—H12C | 109.5 |
C4—C5—Br1 | 119.11 (9) | H12B—C12—H12C | 109.5 |
C5—C6—C7 | 118.75 (10) | ||
C10—N1—N2—C11 | 179.07 (11) | C5—C6—C7—C8 | −174.14 (11) |
C2—O1—C1—O2 | −171.47 (12) | C2—C7—C8—C9 | 3.45 (17) |
C2—O1—C1—C9 | 7.73 (18) | C6—C7—C8—C9 | 179.96 (12) |
C1—O1—C2—C3 | 178.59 (11) | C7—C8—C9—C1 | 3.09 (18) |
C1—O1—C2—C7 | −1.23 (18) | C7—C8—C9—C10 | −178.55 (11) |
O1—C2—C3—C4 | 179.76 (11) | O2—C1—C9—C8 | 170.56 (14) |
C7—C2—C3—C4 | −0.43 (19) | O1—C1—C9—C8 | −8.54 (18) |
C2—C3—C4—C5 | 0.48 (19) | O2—C1—C9—C10 | −7.8 (2) |
C3—C4—C5—C6 | 0.93 (19) | O1—C1—C9—C10 | 173.08 (11) |
C3—C4—C5—Br1 | −176.32 (9) | N2—N1—C10—C9 | 178.83 (10) |
C4—C5—C6—C7 | −2.35 (18) | N2—N1—C10—C12 | 0.63 (18) |
Br1—C5—C6—C7 | 174.90 (9) | C8—C9—C10—N1 | −18.82 (16) |
O1—C2—C7—C6 | 178.81 (11) | C1—C9—C10—N1 | 159.52 (11) |
C3—C2—C7—C6 | −0.99 (18) | C8—C9—C10—C12 | 159.43 (12) |
O1—C2—C7—C8 | −4.54 (17) | C1—C9—C10—C12 | −22.22 (17) |
C3—C2—C7—C8 | 175.65 (11) | N1—N2—C11—N3 | 2.93 (17) |
C5—C6—C7—C2 | 2.34 (18) | N1—N2—C11—S1 | −177.80 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H2N3···N1 | 0.82 (3) | 2.15 (3) | 2.6004 (17) | 114 (3) |
N2—H1N2···S1i | 0.73 (3) | 2.70 (3) | 3.4094 (13) | 165 (3) |
N3—H1N3···S1ii | 0.81 (2) | 2.49 (2) | 3.3010 (13) | 175.6 (19) |
Symmetry codes: (i) −x−1, −y+1, −z+1; (ii) −x−1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H10BrN3O2S |
Mr | 340.20 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 6.3796 (6), 8.1260 (7), 13.3756 (12) |
α, β, γ (°) | 106.697 (2), 95.095 (2), 98.925 (2) |
V (Å3) | 649.57 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 3.33 |
Crystal size (mm) | 0.73 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.196, 0.637 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19355, 5036, 4733 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.777 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.021, 0.084, 1.17 |
No. of reflections | 5036 |
No. of parameters | 185 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.73, −0.56 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H2N3···N1 | 0.82 (3) | 2.15 (3) | 2.6004 (17) | 114 (3) |
N2—H1N2···S1i | 0.73 (3) | 2.70 (3) | 3.4094 (13) | 165 (3) |
N3—H1N3···S1ii | 0.81 (2) | 2.49 (2) | 3.3010 (13) | 175.6 (19) |
Symmetry codes: (i) −x−1, −y+1, −z+1; (ii) −x−1, −y, −z+1. |
Acknowledgements
The authors thank the Malaysian Government and Universiti Sains Malaysia (USM) for a Short-term Grant (No. 304/PKIMIA/639004) to conduct this research. AA thanks the Pakistan Government and PCSIR for financial scholarship support. HKF and JHG thank USM for the Research University Golden Goose grant (No. 1001/PFIZIK/811012). JHG also thanks USM for the award of a USM fellowship.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Thiosemicarbazide compounds exhibit various biological activities such as anti-bacterial, anti-fungal and especially anti-tuberculosis (Shukla et al., 1984, Desai et al., 1984). Apart from this, coumarins constitute an important class of compounds found throughout the plant kingdom and are known to have diverse activities such as anti-coagulants (Anderson et al., 2002, Tassies et al., 2002), anti-bacterial (Mitscher, 2002, Laffitte et al., 2002), anti-fungal (Moffett, 1964) and cytotoxicity (Weber et al., 1998) properties. The coumarin moiety and related derivatives are also reported to have importance as vasodilators (Hoult & Payá, 1996), anti-mutagenic agents (Pillai et al., 1999), scavengers of reactive oxygen species (Finn et al., 2004), as well as lipoxygenese and cyclooxygenese inhibitors (Kimura et al., 1985, Hofmanová et al., 1998). The title compound exhibits very good anti-bacterial activity against Escherichia coli and Bacillus. subtilus (Chulian et al., 2009). The objective of this study is to synthesize new derivatives of coumarin-thiosemicarbazide compounds. We present in this paper the crystal structure of this title compound.
The title thiosemicarbazide compound (Fig. 1) exists in a cis configuration with respect to the Schiff base C10═N1 bond [N1═C10 = 1.2890 (15) Å; torsion angle C9–C10–N1–N2 = 178.83 (10)°]. The 2H-chromene ring system (C1-C9/O1) is approximately planar, with a maximum deviation of 0.059 (1) Å at atom C9. The mean plane through the thiosemicarbazide moiety (N1/N2/C11/N3/S1) forms dihedral angle of 17.50 (5)° with the 2H-chromene ring system. Bond lengths and angles are consistent to a closely related structure (Arshad et al., 2010).
In the crystal structure, pairs of intermolecular N2—H1N2···S1 and N3—H1N3···S1 hydrogen bonds (Table 1) form bifurcated acceptor hydrogen bonds which generate two different R22(8) hydrogen bond ring motifs with zig-zag formation (Fig. 2, Bernstein et al., 1995). These hydrogen bonds link adjacent molecules into two-molecule wide chains along the b axis. Intermolecular short Br···O interactions [Br1···O2iii = 3.0732 (13) Å; (iii) x+1, y-1, z] interconnect these chains into two-dimensional planes parallel to the ab plane (Fig. 3). The crystal structure is further stabilized by weak Cg1···Cg1 interactions involving the centroid of the C2-C7 benzene ring [Cg1···Cg1iv = 3.7870 (8) Å; (iv) -x+1, -y, -z].