organic compounds
19-[(E)-4-Chlorobenzylidene]-16-(4-chlorophenyl)-2-hydroxy-1,11-diazahexacyclo[15.3.1.02,10.03,8.010,17.011,15]henicosa-3(8),4,6-triene-9,18-dione
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bSchool of Pharmaceutical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and cX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C32H26Cl2N2O3, the piperidone ring adopts a chair conformation and the proline and pyrrolidine rings adopt envelope conformations. The indane ring system is essentially planar with an r.m.s. deviation of 0.011 Å for the non-H atoms. The dihedral angle between the two chloro-substituted benzene rings is 63.69 (10)°. Intramolecular C—H⋯O and N—H⋯O hydrogen bonds may influence the molecular conformation. In the molecules are connected into layers by weak intermolecular C—H⋯O hydrogen bonds.
Related literature
For cycloaddition reactions, see: Dondas et al. (2004); Boruah et al. (2007). For applications of pyrrolizines, see: Boruah et al. (2007); Dimmock et al. (2001); El-Subbagh et al. (2000); Lee et al. (2001); Liddell (1998). For puckering parameters, see: Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810018611/lh5043sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810018611/lh5043Isup2.hkl
A mixture of 3,5-bis[(E)-(4-chlorophenyl)methylidene] tetrahydro-4-(1H)-pyridinone (0.100 g, 0.291 mmol), ninhydrin (0.052 g, 0.291 mmol) and proline (0.033 g, 0.291 mmol) were dissolved in methanol (10 mL) and refluxed for 30 minutes. After completion of the reaction as evident from TLC, the mixture was poured into water (50 mL). The precipitated solid was filtered and washed with water to afford the product which was recrystallised from ethyl acetate to reveal the title compound as yellow crystals.
Atom H1O2 was located in a difference Fourier map and refined freely. The remaining H atoms were positioned geometrically [O–H = 0.86 (4) Å and C–H = 0.93–0.98 Å] and were refined using a riding model, with Uiso(H) = 1.2Ueq(C).
1,3-Dipolar
of nonstabilized with represents one of the most convergent approaches for the construction of five membered heterocycles (Dondas et al., 2004; Boruah et al. 2007). The pyrrolizine occurs in many natural products of potential use in medicine and agriculture (Liddell, 1998). Heterocycles with piperidine sub-structures display important biological activities, such as cytotoxic (Dimmock et al., 2001) and anticancer properties (El-Subbagh et al., 2000) besides being useful as synthons in the construction of alkaloid natural products (Lee et al., 2001). In view of the biological importance of aforementioned heterocycles, the determination of the title compound was carried out and the results are presented herein.The molecular structure of the title compound is shown in Fig.1. The piperidone (N1/C8–C12) ring adopts a chair conformation [Q = 0.608 (3) Å, Θ = 37.4 (3)°, φ= 59.8 (4)°; Cremer & Pople, 1975]. The proline ring (N2/C22–C25) and the five membered pyrrolidine ring (N1/C10/C11/C13/C14) adopt envelope conformations [puckering parameters Q = 0.398 (3) Å, φ = 269.4 (4)° and Q = 0.470 (3) Å, φ = 214.4 (3)° respectively]. The indane ring system is essentially planar with an rms deviation of 0.011 Å for the non-hydrogen atoms. The dihedral angle between the two chlorophenyl rings (C1–C6) and (C27–C32) is 63.69 (10)°. In the molecules are connected into layers by intermolecular weak C—H···O hydrogen bonds (Table 1, Fig. 2).
For
reactions, see: Dondas et al. (2004); Boruah et al. (2007). For applications of pyrrolizines, see: Boruah et al. (2007); Dimmock et al. (2001); El-Subbagh et al. (2000); Lee et al. (2001); Liddell (1998). For puckering parameters, see: Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C32H26Cl2N2O3 | F(000) = 1160 |
Mr = 557.45 | Dx = 1.438 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5137 reflections |
a = 14.603 (2) Å | θ = 2.3–29.6° |
b = 10.5701 (14) Å | µ = 0.29 mm−1 |
c = 21.808 (2) Å | T = 100 K |
β = 130.094 (6)° | Block, yellow |
V = 2575.1 (5) Å3 | 0.34 × 0.19 × 0.11 mm |
Z = 4 |
Bruker APEXII DUO CCD area-detector diffractometer | 7631 independent reflections |
Radiation source: fine-focus sealed tube | 5380 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
φ and ω scans | θmax = 30.3°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −19→20 |
Tmin = 0.906, Tmax = 0.969 | k = −14→14 |
27859 measured reflections | l = −30→30 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.186 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.1017P)2 + 1.0123P] where P = (Fo2 + 2Fc2)/3 |
7631 reflections | (Δ/σ)max < 0.001 |
356 parameters | Δρmax = 0.62 e Å−3 |
0 restraints | Δρmin = −0.58 e Å−3 |
C32H26Cl2N2O3 | V = 2575.1 (5) Å3 |
Mr = 557.45 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.603 (2) Å | µ = 0.29 mm−1 |
b = 10.5701 (14) Å | T = 100 K |
c = 21.808 (2) Å | 0.34 × 0.19 × 0.11 mm |
β = 130.094 (6)° |
Bruker APEXII DUO CCD area-detector diffractometer | 7631 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 5380 reflections with I > 2σ(I) |
Tmin = 0.906, Tmax = 0.969 | Rint = 0.045 |
27859 measured reflections |
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.186 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.62 e Å−3 |
7631 reflections | Δρmin = −0.58 e Å−3 |
356 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.72105 (6) | 0.37813 (6) | 0.23348 (4) | 0.03884 (18) | |
Cl2 | 0.28180 (6) | 1.55604 (6) | 0.30038 (4) | 0.03719 (17) | |
O1 | 0.70242 (16) | 1.14499 (14) | 0.37668 (9) | 0.0270 (3) | |
O2 | 0.75301 (15) | 0.85624 (15) | 0.61320 (9) | 0.0248 (3) | |
O3 | 0.97349 (14) | 1.06477 (14) | 0.56290 (9) | 0.0265 (3) | |
N1 | 0.62861 (16) | 0.87558 (16) | 0.47338 (10) | 0.0205 (3) | |
N2 | 0.83265 (17) | 1.08411 (16) | 0.62301 (10) | 0.0230 (4) | |
C1 | 0.8080 (2) | 0.7298 (2) | 0.31990 (13) | 0.0278 (5) | |
H1A | 0.8706 | 0.7859 | 0.3399 | 0.033* | |
C2 | 0.8108 (2) | 0.6108 (2) | 0.29435 (14) | 0.0315 (5) | |
H2A | 0.8744 | 0.5876 | 0.2966 | 0.038* | |
C3 | 0.7182 (2) | 0.5272 (2) | 0.26543 (13) | 0.0273 (5) | |
C4 | 0.6213 (2) | 0.5618 (2) | 0.25928 (13) | 0.0268 (5) | |
H4A | 0.5591 | 0.5050 | 0.2393 | 0.032* | |
C5 | 0.6175 (2) | 0.6819 (2) | 0.28318 (12) | 0.0245 (4) | |
H5A | 0.5511 | 0.7065 | 0.2774 | 0.029* | |
C6 | 0.7127 (2) | 0.76651 (19) | 0.31604 (12) | 0.0225 (4) | |
C7 | 0.71498 (19) | 0.89214 (19) | 0.34519 (11) | 0.0221 (4) | |
H7A | 0.7511 | 0.9561 | 0.3380 | 0.026* | |
C8 | 0.67102 (18) | 0.92557 (18) | 0.38095 (11) | 0.0201 (4) | |
C9 | 0.69127 (19) | 1.05940 (18) | 0.40864 (11) | 0.0210 (4) | |
C10 | 0.69859 (19) | 1.08168 (18) | 0.48066 (11) | 0.0193 (4) | |
C11 | 0.59325 (19) | 1.00825 (19) | 0.46492 (12) | 0.0214 (4) | |
H11A | 0.5842 | 1.0307 | 0.5039 | 0.026* | |
H11B | 0.5187 | 1.0251 | 0.4115 | 0.026* | |
C12 | 0.61408 (19) | 0.83699 (19) | 0.40280 (11) | 0.0214 (4) | |
H12A | 0.5292 | 0.8306 | 0.3573 | 0.026* | |
H12B | 0.6486 | 0.7534 | 0.4126 | 0.026* | |
C13 | 0.80569 (19) | 1.01008 (18) | 0.55666 (11) | 0.0198 (4) | |
C14 | 0.75404 (19) | 0.87571 (19) | 0.55007 (11) | 0.0207 (4) | |
C15 | 0.8366 (2) | 0.78312 (19) | 0.55386 (12) | 0.0222 (4) | |
C16 | 0.8318 (2) | 0.6517 (2) | 0.55102 (13) | 0.0269 (5) | |
H16A | 0.7728 | 0.6085 | 0.5472 | 0.032* | |
C17 | 0.9170 (2) | 0.5864 (2) | 0.55402 (14) | 0.0317 (5) | |
H17A | 0.9146 | 0.4985 | 0.5519 | 0.038* | |
C18 | 1.0055 (2) | 0.6494 (2) | 0.56008 (15) | 0.0321 (5) | |
H18A | 1.0621 | 0.6034 | 0.5625 | 0.039* | |
C19 | 1.0108 (2) | 0.7800 (2) | 0.56257 (13) | 0.0275 (5) | |
H19A | 1.0698 | 0.8228 | 0.5663 | 0.033* | |
C20 | 0.92553 (19) | 0.84543 (19) | 0.55940 (11) | 0.0216 (4) | |
C21 | 0.91251 (19) | 0.98351 (19) | 0.56015 (11) | 0.0209 (4) | |
C22 | 0.9558 (2) | 1.0914 (2) | 0.70050 (12) | 0.0278 (5) | |
H22A | 1.0140 | 1.0753 | 0.6936 | 0.033* | |
H22B | 0.9675 | 1.0305 | 0.7383 | 0.033* | |
C23 | 0.9671 (2) | 1.2266 (2) | 0.72949 (13) | 0.0307 (5) | |
H23A | 1.0495 | 1.2555 | 0.7637 | 0.037* | |
H23B | 0.9376 | 1.2333 | 0.7584 | 0.037* | |
C24 | 0.8886 (2) | 1.3011 (2) | 0.65101 (13) | 0.0286 (5) | |
H24A | 0.8644 | 1.3815 | 0.6580 | 0.034* | |
H24B | 0.9298 | 1.3161 | 0.6303 | 0.034* | |
C25 | 0.7816 (2) | 1.21395 (19) | 0.59597 (12) | 0.0237 (4) | |
H25A | 0.7231 | 1.2278 | 0.6036 | 0.028* | |
C26 | 0.7192 (2) | 1.22071 (18) | 0.50652 (12) | 0.0210 (4) | |
H26A | 0.7777 | 1.2545 | 0.5025 | 0.025* | |
C27 | 0.6102 (2) | 1.30567 (18) | 0.45664 (12) | 0.0221 (4) | |
C28 | 0.5997 (2) | 1.39566 (19) | 0.40587 (13) | 0.0251 (4) | |
H28A | 0.6608 | 1.4037 | 0.4036 | 0.030* | |
C29 | 0.4999 (2) | 1.4740 (2) | 0.35843 (13) | 0.0281 (5) | |
H29A | 0.4949 | 1.5344 | 0.3254 | 0.034* | |
C30 | 0.4084 (2) | 1.46082 (19) | 0.36103 (14) | 0.0277 (5) | |
C31 | 0.4160 (2) | 1.3725 (2) | 0.41077 (16) | 0.0322 (5) | |
H31A | 0.3542 | 1.3645 | 0.4124 | 0.039* | |
C32 | 0.5155 (2) | 1.2962 (2) | 0.45792 (15) | 0.0313 (5) | |
H32A | 0.5202 | 1.2371 | 0.4914 | 0.038* | |
H1O2 | 0.782 (4) | 0.925 (4) | 0.640 (3) | 0.077 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0295 (3) | 0.0352 (3) | 0.0469 (3) | −0.0032 (3) | 0.0224 (3) | −0.0176 (2) |
Cl2 | 0.0401 (4) | 0.0299 (3) | 0.0441 (3) | 0.0115 (3) | 0.0283 (3) | 0.0032 (2) |
O1 | 0.0343 (9) | 0.0231 (7) | 0.0303 (7) | 0.0004 (7) | 0.0238 (7) | 0.0030 (6) |
O2 | 0.0299 (8) | 0.0265 (7) | 0.0239 (7) | −0.0057 (7) | 0.0199 (7) | −0.0006 (6) |
O3 | 0.0230 (8) | 0.0262 (7) | 0.0299 (7) | −0.0067 (6) | 0.0169 (7) | −0.0007 (6) |
N1 | 0.0182 (8) | 0.0210 (7) | 0.0211 (7) | −0.0033 (7) | 0.0121 (7) | −0.0020 (6) |
N2 | 0.0238 (9) | 0.0227 (8) | 0.0191 (7) | −0.0050 (7) | 0.0123 (7) | −0.0038 (6) |
C1 | 0.0239 (11) | 0.0296 (10) | 0.0326 (10) | −0.0059 (9) | 0.0195 (10) | −0.0061 (8) |
C2 | 0.0252 (11) | 0.0354 (12) | 0.0370 (12) | −0.0043 (10) | 0.0215 (11) | −0.0087 (9) |
C3 | 0.0251 (11) | 0.0282 (10) | 0.0271 (10) | −0.0037 (9) | 0.0161 (10) | −0.0078 (8) |
C4 | 0.0225 (11) | 0.0310 (10) | 0.0256 (10) | −0.0063 (9) | 0.0148 (9) | −0.0084 (8) |
C5 | 0.0213 (10) | 0.0292 (10) | 0.0241 (9) | −0.0007 (9) | 0.0151 (9) | −0.0035 (8) |
C6 | 0.0213 (10) | 0.0252 (9) | 0.0198 (8) | −0.0007 (8) | 0.0127 (8) | −0.0003 (7) |
C7 | 0.0201 (10) | 0.0222 (9) | 0.0203 (8) | −0.0019 (8) | 0.0114 (8) | −0.0008 (7) |
C8 | 0.0171 (9) | 0.0207 (8) | 0.0173 (8) | −0.0009 (8) | 0.0087 (8) | 0.0004 (7) |
C9 | 0.0185 (10) | 0.0213 (9) | 0.0191 (8) | 0.0003 (8) | 0.0103 (8) | −0.0001 (7) |
C10 | 0.0198 (9) | 0.0174 (8) | 0.0206 (8) | −0.0017 (8) | 0.0129 (8) | −0.0014 (6) |
C11 | 0.0190 (10) | 0.0217 (9) | 0.0215 (9) | −0.0021 (8) | 0.0121 (8) | −0.0017 (7) |
C12 | 0.0189 (10) | 0.0230 (9) | 0.0197 (8) | −0.0031 (8) | 0.0112 (8) | −0.0027 (7) |
C13 | 0.0205 (10) | 0.0180 (8) | 0.0192 (8) | −0.0046 (8) | 0.0120 (8) | −0.0017 (6) |
C14 | 0.0205 (10) | 0.0216 (9) | 0.0206 (8) | −0.0049 (8) | 0.0135 (8) | −0.0006 (7) |
C15 | 0.0227 (10) | 0.0212 (9) | 0.0217 (9) | −0.0027 (8) | 0.0138 (9) | 0.0004 (7) |
C16 | 0.0312 (12) | 0.0218 (9) | 0.0302 (10) | −0.0025 (9) | 0.0209 (10) | 0.0019 (8) |
C17 | 0.0373 (13) | 0.0221 (10) | 0.0355 (11) | 0.0032 (10) | 0.0233 (11) | 0.0025 (8) |
C18 | 0.0318 (13) | 0.0285 (10) | 0.0381 (12) | 0.0081 (10) | 0.0235 (11) | 0.0044 (9) |
C19 | 0.0240 (11) | 0.0299 (10) | 0.0302 (10) | 0.0031 (9) | 0.0182 (10) | 0.0047 (8) |
C20 | 0.0195 (10) | 0.0232 (9) | 0.0196 (8) | −0.0006 (8) | 0.0114 (8) | 0.0020 (7) |
C21 | 0.0175 (9) | 0.0218 (9) | 0.0181 (8) | −0.0003 (8) | 0.0090 (8) | 0.0021 (7) |
C22 | 0.0248 (11) | 0.0275 (10) | 0.0207 (9) | −0.0058 (9) | 0.0099 (9) | −0.0042 (8) |
C23 | 0.0307 (12) | 0.0320 (11) | 0.0245 (10) | −0.0110 (10) | 0.0155 (10) | −0.0087 (8) |
C24 | 0.0311 (12) | 0.0236 (9) | 0.0283 (10) | −0.0085 (9) | 0.0179 (10) | −0.0088 (8) |
C25 | 0.0271 (11) | 0.0212 (9) | 0.0257 (9) | −0.0036 (8) | 0.0184 (9) | −0.0041 (7) |
C26 | 0.0229 (10) | 0.0185 (8) | 0.0241 (9) | −0.0028 (8) | 0.0162 (9) | −0.0024 (7) |
C27 | 0.0249 (10) | 0.0178 (8) | 0.0251 (9) | −0.0029 (8) | 0.0168 (9) | −0.0032 (7) |
C28 | 0.0296 (11) | 0.0211 (9) | 0.0316 (10) | −0.0019 (9) | 0.0228 (10) | −0.0014 (7) |
C29 | 0.0328 (12) | 0.0220 (9) | 0.0300 (10) | 0.0007 (9) | 0.0205 (10) | 0.0023 (8) |
C30 | 0.0308 (12) | 0.0189 (9) | 0.0344 (11) | 0.0028 (9) | 0.0214 (10) | −0.0028 (8) |
C31 | 0.0331 (13) | 0.0267 (10) | 0.0492 (14) | 0.0007 (10) | 0.0322 (12) | 0.0015 (9) |
C32 | 0.0400 (14) | 0.0227 (10) | 0.0456 (13) | 0.0027 (10) | 0.0341 (12) | 0.0068 (9) |
Cl1—C3 | 1.734 (2) | C13—C14 | 1.571 (3) |
Cl2—C30 | 1.741 (2) | C14—C15 | 1.514 (3) |
O1—C9 | 1.215 (2) | C15—C20 | 1.390 (3) |
O2—C14 | 1.402 (2) | C15—C16 | 1.391 (3) |
O2—H1O2 | 0.86 (4) | C16—C17 | 1.387 (4) |
O3—C21 | 1.211 (3) | C16—H16A | 0.9300 |
N1—C11 | 1.464 (3) | C17—C18 | 1.382 (4) |
N1—C12 | 1.470 (3) | C17—H17A | 0.9300 |
N1—C14 | 1.485 (3) | C18—C19 | 1.382 (3) |
N2—C13 | 1.459 (2) | C18—H18A | 0.9300 |
N2—C22 | 1.477 (3) | C19—C20 | 1.386 (3) |
N2—C25 | 1.490 (3) | C19—H19A | 0.9300 |
C1—C2 | 1.387 (3) | C20—C21 | 1.473 (3) |
C1—C6 | 1.393 (3) | C22—C23 | 1.528 (3) |
C1—H1A | 0.9300 | C22—H22A | 0.9700 |
C2—C3 | 1.382 (3) | C22—H22B | 0.9700 |
C2—H2A | 0.9300 | C23—C24 | 1.529 (3) |
C3—C4 | 1.382 (3) | C23—H23A | 0.9700 |
C4—C5 | 1.386 (3) | C23—H23B | 0.9700 |
C4—H4A | 0.9300 | C24—C25 | 1.521 (3) |
C5—C6 | 1.401 (3) | C24—H24A | 0.9700 |
C5—H5A | 0.9300 | C24—H24B | 0.9700 |
C6—C7 | 1.464 (3) | C25—C26 | 1.533 (3) |
C7—C8 | 1.338 (3) | C25—H25A | 0.9800 |
C7—H7A | 0.9300 | C26—C27 | 1.515 (3) |
C8—C9 | 1.491 (3) | C26—H26A | 0.9800 |
C8—C12 | 1.518 (3) | C27—C28 | 1.391 (3) |
C9—C10 | 1.522 (3) | C27—C32 | 1.404 (3) |
C10—C26 | 1.533 (3) | C28—C29 | 1.392 (3) |
C10—C11 | 1.551 (3) | C28—H28A | 0.9300 |
C10—C13 | 1.558 (3) | C29—C30 | 1.380 (4) |
C11—H11A | 0.9700 | C29—H29A | 0.9300 |
C11—H11B | 0.9700 | C30—C31 | 1.381 (3) |
C12—H12A | 0.9700 | C31—C32 | 1.376 (3) |
C12—H12B | 0.9700 | C31—H31A | 0.9300 |
C13—C21 | 1.538 (3) | C32—H32A | 0.9300 |
C14—O2—H1O2 | 103 (3) | C17—C16—C15 | 118.5 (2) |
C11—N1—C12 | 109.42 (15) | C17—C16—H16A | 120.8 |
C11—N1—C14 | 102.71 (15) | C15—C16—H16A | 120.8 |
C12—N1—C14 | 114.90 (17) | C18—C17—C16 | 121.3 (2) |
C13—N2—C22 | 120.99 (18) | C18—C17—H17A | 119.3 |
C13—N2—C25 | 110.79 (15) | C16—C17—H17A | 119.3 |
C22—N2—C25 | 109.58 (16) | C17—C18—C19 | 120.7 (2) |
C2—C1—C6 | 121.0 (2) | C17—C18—H18A | 119.7 |
C2—C1—H1A | 119.5 | C19—C18—H18A | 119.7 |
C6—C1—H1A | 119.5 | C18—C19—C20 | 118.1 (2) |
C3—C2—C1 | 119.3 (2) | C18—C19—H19A | 121.0 |
C3—C2—H2A | 120.4 | C20—C19—H19A | 121.0 |
C1—C2—H2A | 120.4 | C19—C20—C15 | 121.8 (2) |
C2—C3—C4 | 121.0 (2) | C19—C20—C21 | 127.7 (2) |
C2—C3—Cl1 | 119.65 (18) | C15—C20—C21 | 110.51 (19) |
C4—C3—Cl1 | 119.31 (18) | O3—C21—C20 | 127.4 (2) |
C3—C4—C5 | 119.4 (2) | O3—C21—C13 | 124.27 (19) |
C3—C4—H4A | 120.3 | C20—C21—C13 | 108.33 (17) |
C5—C4—H4A | 120.3 | N2—C22—C23 | 104.47 (19) |
C4—C5—C6 | 120.7 (2) | N2—C22—H22A | 110.9 |
C4—C5—H5A | 119.7 | C23—C22—H22A | 110.9 |
C6—C5—H5A | 119.7 | N2—C22—H22B | 110.9 |
C1—C6—C5 | 118.44 (19) | C23—C22—H22B | 110.9 |
C1—C6—C7 | 119.0 (2) | H22A—C22—H22B | 108.9 |
C5—C6—C7 | 122.6 (2) | C22—C23—C24 | 102.44 (16) |
C8—C7—C6 | 127.4 (2) | C22—C23—H23A | 111.3 |
C8—C7—H7A | 116.3 | C24—C23—H23A | 111.3 |
C6—C7—H7A | 116.3 | C22—C23—H23B | 111.3 |
C7—C8—C9 | 116.25 (19) | C24—C23—H23B | 111.3 |
C7—C8—C12 | 125.83 (18) | H23A—C23—H23B | 109.2 |
C9—C8—C12 | 117.63 (18) | C25—C24—C23 | 102.73 (17) |
O1—C9—C8 | 122.60 (18) | C25—C24—H24A | 111.2 |
O1—C9—C10 | 122.02 (18) | C23—C24—H24A | 111.2 |
C8—C9—C10 | 115.37 (17) | C25—C24—H24B | 111.2 |
C9—C10—C26 | 113.24 (16) | C23—C24—H24B | 111.2 |
C9—C10—C11 | 107.07 (16) | H24A—C24—H24B | 109.1 |
C26—C10—C11 | 119.53 (17) | N2—C25—C24 | 104.33 (18) |
C9—C10—C13 | 112.20 (17) | N2—C25—C26 | 106.39 (15) |
C26—C10—C13 | 104.45 (15) | C24—C25—C26 | 116.25 (18) |
C11—C10—C13 | 99.52 (15) | N2—C25—H25A | 109.9 |
N1—C11—C10 | 103.43 (16) | C24—C25—H25A | 109.9 |
N1—C11—H11A | 111.1 | C26—C25—H25A | 109.9 |
C10—C11—H11A | 111.1 | C27—C26—C10 | 115.95 (17) |
N1—C11—H11B | 111.1 | C27—C26—C25 | 115.44 (17) |
C10—C11—H11B | 111.1 | C10—C26—C25 | 103.79 (15) |
H11A—C11—H11B | 109.0 | C27—C26—H26A | 107.0 |
N1—C12—C8 | 114.75 (16) | C10—C26—H26A | 107.0 |
N1—C12—H12A | 108.6 | C25—C26—H26A | 107.0 |
C8—C12—H12A | 108.6 | C28—C27—C32 | 117.3 (2) |
N1—C12—H12B | 108.6 | C28—C27—C26 | 120.2 (2) |
C8—C12—H12B | 108.6 | C32—C27—C26 | 122.47 (18) |
H12A—C12—H12B | 107.6 | C27—C28—C29 | 121.6 (2) |
N2—C13—C21 | 115.59 (17) | C27—C28—H28A | 119.2 |
N2—C13—C10 | 103.85 (16) | C29—C28—H28A | 119.2 |
C21—C13—C10 | 115.64 (16) | C30—C29—C28 | 119.2 (2) |
N2—C13—C14 | 112.50 (15) | C30—C29—H29A | 120.4 |
C21—C13—C14 | 104.56 (16) | C28—C29—H29A | 120.4 |
C10—C13—C14 | 104.36 (16) | C29—C30—C31 | 120.7 (2) |
O2—C14—N1 | 108.68 (17) | C29—C30—Cl2 | 119.54 (17) |
O2—C14—C15 | 111.33 (16) | C31—C30—Cl2 | 119.76 (19) |
N1—C14—C15 | 114.98 (16) | C32—C31—C30 | 119.6 (2) |
O2—C14—C13 | 110.56 (15) | C32—C31—H31A | 120.2 |
N1—C14—C13 | 105.97 (15) | C30—C31—H31A | 120.2 |
C15—C14—C13 | 105.12 (17) | C31—C32—C27 | 121.5 (2) |
C20—C15—C16 | 119.7 (2) | C31—C32—H32A | 119.2 |
C20—C15—C14 | 111.42 (17) | C27—C32—H32A | 119.2 |
C16—C15—C14 | 128.9 (2) | ||
C6—C1—C2—C3 | −0.7 (4) | C10—C13—C14—C15 | 124.24 (16) |
C1—C2—C3—C4 | 2.1 (4) | O2—C14—C15—C20 | −121.38 (18) |
C1—C2—C3—Cl1 | −179.90 (18) | N1—C14—C15—C20 | 114.48 (19) |
C2—C3—C4—C5 | −0.6 (3) | C13—C14—C15—C20 | −1.6 (2) |
Cl1—C3—C4—C5 | −178.64 (17) | O2—C14—C15—C16 | 59.9 (3) |
C3—C4—C5—C6 | −2.3 (3) | N1—C14—C15—C16 | −64.2 (3) |
C2—C1—C6—C5 | −2.1 (3) | C13—C14—C15—C16 | 179.6 (2) |
C2—C1—C6—C7 | 178.8 (2) | C20—C15—C16—C17 | 0.1 (3) |
C4—C5—C6—C1 | 3.6 (3) | C14—C15—C16—C17 | 178.8 (2) |
C4—C5—C6—C7 | −177.36 (19) | C15—C16—C17—C18 | 0.3 (3) |
C1—C6—C7—C8 | −146.5 (2) | C16—C17—C18—C19 | −0.6 (4) |
C5—C6—C7—C8 | 34.5 (3) | C17—C18—C19—C20 | 0.5 (3) |
C6—C7—C8—C9 | 176.88 (19) | C18—C19—C20—C15 | 0.0 (3) |
C6—C7—C8—C12 | 3.3 (3) | C18—C19—C20—C21 | −179.2 (2) |
C7—C8—C9—O1 | 27.9 (3) | C16—C15—C20—C19 | −0.3 (3) |
C12—C8—C9—O1 | −158.0 (2) | C14—C15—C20—C19 | −179.13 (18) |
C7—C8—C9—C10 | −151.40 (19) | C16—C15—C20—C21 | 179.02 (18) |
C12—C8—C9—C10 | 22.7 (3) | C14—C15—C20—C21 | 0.2 (2) |
O1—C9—C10—C26 | 0.8 (3) | C19—C20—C21—O3 | 0.8 (3) |
C8—C9—C10—C26 | −179.89 (18) | C15—C20—C21—O3 | −178.47 (19) |
O1—C9—C10—C11 | 134.7 (2) | C19—C20—C21—C13 | −179.31 (19) |
C8—C9—C10—C11 | −46.0 (2) | C15—C20—C21—C13 | 1.4 (2) |
O1—C9—C10—C13 | −117.1 (2) | N2—C13—C21—O3 | −58.2 (3) |
C8—C9—C10—C13 | 62.2 (2) | C10—C13—C21—O3 | 63.4 (3) |
C12—N1—C11—C10 | −74.00 (18) | C14—C13—C21—O3 | 177.57 (18) |
C14—N1—C11—C10 | 48.50 (18) | N2—C13—C21—C20 | 121.89 (17) |
C9—C10—C11—N1 | 71.07 (18) | C10—C13—C21—C20 | −116.49 (17) |
C26—C10—C11—N1 | −158.51 (16) | C14—C13—C21—C20 | −2.35 (19) |
C13—C10—C11—N1 | −45.81 (17) | C13—N2—C22—C23 | 144.02 (19) |
C11—N1—C12—C8 | 50.1 (2) | C25—N2—C22—C23 | 13.2 (2) |
C14—N1—C12—C8 | −64.8 (2) | N2—C22—C23—C24 | −33.2 (2) |
C7—C8—C12—N1 | 150.2 (2) | C22—C23—C24—C25 | 40.6 (2) |
C9—C8—C12—N1 | −23.3 (3) | C13—N2—C25—C24 | −123.78 (18) |
C22—N2—C13—C21 | −21.8 (3) | C22—N2—C25—C24 | 12.2 (2) |
C25—N2—C13—C21 | 108.51 (19) | C13—N2—C25—C26 | −0.3 (2) |
C22—N2—C13—C10 | −149.50 (18) | C22—N2—C25—C26 | 135.68 (18) |
C25—N2—C13—C10 | −19.2 (2) | C23—C24—C25—N2 | −32.7 (2) |
C22—N2—C13—C14 | 98.2 (2) | C23—C24—C25—C26 | −149.45 (19) |
C25—N2—C13—C14 | −131.49 (18) | C9—C10—C26—C27 | 78.5 (2) |
C9—C10—C13—N2 | 154.42 (16) | C11—C10—C26—C27 | −49.1 (2) |
C26—C10—C13—N2 | 31.4 (2) | C13—C10—C26—C27 | −159.14 (17) |
C11—C10—C13—N2 | −92.63 (17) | C9—C10—C26—C25 | −153.81 (18) |
C9—C10—C13—C21 | 26.7 (2) | C11—C10—C26—C25 | 78.6 (2) |
C26—C10—C13—C21 | −96.33 (19) | C13—C10—C26—C25 | −31.4 (2) |
C11—C10—C13—C21 | 139.66 (17) | N2—C25—C26—C27 | 148.12 (18) |
C9—C10—C13—C14 | −87.54 (19) | C24—C25—C26—C27 | −96.2 (2) |
C26—C10—C13—C14 | 149.42 (16) | N2—C25—C26—C10 | 20.1 (2) |
C11—C10—C13—C14 | 25.41 (18) | C24—C25—C26—C10 | 135.8 (2) |
C11—N1—C14—O2 | 88.01 (18) | C10—C26—C27—C28 | −108.6 (2) |
C12—N1—C14—O2 | −153.27 (16) | C25—C26—C27—C28 | 129.7 (2) |
C11—N1—C14—C15 | −146.47 (17) | C10—C26—C27—C32 | 70.1 (3) |
C12—N1—C14—C15 | −27.7 (2) | C25—C26—C27—C32 | −51.6 (3) |
C11—N1—C14—C13 | −30.83 (19) | C32—C27—C28—C29 | 0.4 (3) |
C12—N1—C14—C13 | 87.89 (19) | C26—C27—C28—C29 | 179.10 (19) |
N2—C13—C14—O2 | −3.6 (2) | C27—C28—C29—C30 | −0.9 (3) |
C21—C13—C14—O2 | 122.61 (17) | C28—C29—C30—C31 | 0.9 (3) |
C10—C13—C14—O2 | −115.52 (18) | C28—C29—C30—Cl2 | −178.67 (17) |
N2—C13—C14—N1 | 114.01 (18) | C29—C30—C31—C32 | −0.4 (4) |
C21—C13—C14—N1 | −119.79 (16) | Cl2—C30—C31—C32 | 179.21 (19) |
C10—C13—C14—N1 | 2.1 (2) | C30—C31—C32—C27 | −0.2 (4) |
N2—C13—C14—C15 | −123.83 (18) | C28—C27—C32—C31 | 0.2 (3) |
C21—C13—C14—C15 | 2.37 (18) | C26—C27—C32—C31 | −178.5 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.86 (5) | 1.97 (5) | 2.623 (3) | 133 (5) |
C1—H1A···O3i | 0.93 | 2.44 | 3.305 (3) | 155 |
C22—H22A···O3 | 0.97 | 2.51 | 3.186 (3) | 126 |
C23—H23A···O2ii | 0.97 | 2.59 | 3.506 (3) | 158 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) −x+2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C32H26Cl2N2O3 |
Mr | 557.45 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 14.603 (2), 10.5701 (14), 21.808 (2) |
β (°) | 130.094 (6) |
V (Å3) | 2575.1 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.34 × 0.19 × 0.11 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.906, 0.969 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27859, 7631, 5380 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.710 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.186, 1.06 |
No. of reflections | 7631 |
No. of parameters | 356 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.62, −0.58 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.86 (5) | 1.97 (5) | 2.623 (3) | 133 (5) |
C1—H1A···O3i | 0.9300 | 2.4400 | 3.305 (3) | 155.00 |
C22—H22A···O3 | 0.9700 | 2.5100 | 3.186 (3) | 126.00 |
C23—H23A···O2ii | 0.9700 | 2.5900 | 3.506 (3) | 158.00 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) −x+2, y+1/2, −z+3/2. |
Acknowledgements
The synthetic chemistry work was funded by Universiti Sains Malaysia (USM) under University Research grant No. 1001/PKIMIA/8111016 and RSK thanks Universiti Sains Malaysia for the award of post doctoral fellowship. HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University Golden Goose grant No. 1001/PFIZIK/811012. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
References
Boruah, M., Konwar, D. & Sharma, S. D. (2007). Tetrahedron Lett. 48, 4535–4537. Web of Science CrossRef CAS Google Scholar
Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107. CrossRef CAS Web of Science IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Dimmock, J. R., Padmanilayam, M. P., Puthucode, R. N., Nazarali, A. J., Motaganahalli, N. L., Zello, G. A., Quail, J. W., Oloo, E. O., Kraatz, H. B., Prisciak, J. S., Allen, T. M., Santos, C. L., Balzarini, J., De Clercq, E. & Manavathu, E. K. (2001). J. Med. Chem. 44, 586–593. Web of Science CSD CrossRef PubMed CAS Google Scholar
Dondas, H. A., Fishwick, C. W. G., Grigg, R. & Kilner, C. (2004). Tetrahedron, 60, 3473–3485. Web of Science CSD CrossRef CAS Google Scholar
El-Subbagh, H. I., Abu–Zaid, S. M., Mahran, M. A., Badria, F. A. & Al-Obaid, A. M. (2000). J. Med. Chem. 43, 2915–2921. Web of Science CrossRef PubMed CAS Google Scholar
Lee, H. K., Chun, J. S. & Pak, C. S. (2001). Tetrahedron Lett. 42, 3483–3486. Web of Science CrossRef CAS Google Scholar
Liddell, J. R. (1998). Nat. Prod. Rep. 15, 363–370. CrossRef CAS PubMed Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
1,3-Dipolar cycloaddition of nonstabilized azomethine ylides with olefins represents one of the most convergent approaches for the construction of five membered heterocycles (Dondas et al., 2004; Boruah et al. 2007). The pyrrolizine substructure occurs in many natural products of potential use in medicine and agriculture (Liddell, 1998). Heterocycles with piperidine sub-structures display important biological activities, such as cytotoxic (Dimmock et al., 2001) and anticancer properties (El-Subbagh et al., 2000) besides being useful as synthons in the construction of alkaloid natural products (Lee et al., 2001). In view of the biological importance of aforementioned heterocycles, the crystal structure determination of the title compound was carried out and the results are presented herein.
The molecular structure of the title compound is shown in Fig.1. The piperidone (N1/C8–C12) ring adopts a chair conformation [Q = 0.608 (3) Å, Θ = 37.4 (3)°, φ= 59.8 (4)°; Cremer & Pople, 1975]. The proline ring (N2/C22–C25) and the five membered pyrrolidine ring (N1/C10/C11/C13/C14) adopt envelope conformations [puckering parameters Q = 0.398 (3) Å, φ = 269.4 (4)° and Q = 0.470 (3) Å, φ = 214.4 (3)° respectively]. The indane ring system is essentially planar with an rms deviation of 0.011 Å for the non-hydrogen atoms. The dihedral angle between the two chlorophenyl rings (C1–C6) and (C27–C32) is 63.69 (10)°. In the crystal structure, molecules are connected into layers by intermolecular weak C—H···O hydrogen bonds (Table 1, Fig. 2).