organic compounds
(3aR*,6S*,7S*,7aR*)-2-(4-Methoxybenzyl)-7-(4-nitrophenyl)-6-phenyl-3a,6,7,7a-tetrahydroisoindolin-1-one
aLaboratory of Asymmetric Catalysis and Synthesis, Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, People's Republic of China
*Correspondence e-mail: wyz@zju.edu.cn
The title compound, C28H26N2O4, crystallizes as a racemate with four stereogenic centers. In the molecule, the pyrrolidone ring adopts an and the cyclohexene ring has a twisted In the molecules are linked by weak intermolecular C—H⋯O hydrogen bonds.
Related literature
For bioactive compounds, see: Walling et al. (1988); Liu et al. (2006, 2008). For microwave-assisted intramolecular Diels–Alder cycloaddition, see: Wang et al. (2009); Wu et al. (2006, 2007). For the synthesis of title compound, see: Wu et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: PROCESS-AUTO (Rigaku, 2006); cell PROCESS-AUTO; data reduction: CrystalStructure (Rigaku, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
https://doi.org/10.1107/S1600536810017010/lx2150sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810017010/lx2150Isup2.hkl
To a 10-mL pressurized process vial was added N-(4-methoxybenzyl)- N-(2E,4E)-5-phenylpenta-2,4-dienyl 2-bromoacetamide (133.0 mg, 0.33 mmol), triphenylphosphine (104.0 mg, 0.40 mmol), K2CO3 (68.0 mg, 0.50 mmol), and 4-nitrobenzaldehyde (60.0 mg, 0.40 mmol). After adding aqueous THF (H2O:THF = 1:1, 3.5 mL) the loaded vial was then sealed with a cap containing a silicon septum followed by stirring the mixture at room temperature for 6 h to allow the Wittig olefination taking place among the 2-bromoacetamide and the aldehyde. The vial containing the crude Wittig product was then put into the cavity of a technical microwave reactor with the temperature measured by an IR sensor. After heating at 453 K for 0.5 h, the reaction mixture was successively washed with saturated aqueous NH4Cl and brine, and then extracted with EtOAc (3 x 5 mL). The combined organic layer was dried over Na2SO4, filtered, and evaporated under reduced pressure. The residue was purified by flash
(silica gel, 20% EtOAc in petroleum ether) to furnish the title compound (82.0 mg, 55%), along with a minor diastereomer (17.9 mg, 12%), as a colorless solid. mp 466-468 K (CH2Cl2-EtOAc-hexane). Single crystals, as a racemate, suitable for X-ray diffraction of the title compound were grown at ambient temperature in the mixed solvent of methylene chloride, ethyl acetate and hexane (v:v:v = 1:1:3).The H atoms were placed in calculated positions with C–H = 0.93-0.98 Å, and included in the
in riding model, with Uiso(H) = 1.2Ueq (carrier atom).The title compound, C28H26N2O4, has a hexahydro-1H-isoindolone core, which is present in both synthetic and naturally occurring bioactive compounds (Walling et al., 1988 and Liu et al., 2006, 2008). The title compound has recently been obtained during microwave-assisted intramolecular Diels-Alder
along with a minor diastereomer with a 82:18 (Wang et al., 2009; Wu et al., 2006, 2007, 2009). The compound has four stereogenic centers but crystallizes as a racemate as indicated by the centrosymmetric Here we report the of the title compound (Fig. 1).In the
of the title compound, there are one pyrrolidone ring and one cyclohexene ring. The pyrrolidone ring C1-C2/C7-C8/N1 adopts whereas the cyclohexene ring C2-C7 has a twisted Bond length of C3–C4 is larger than normal C–C single bond because of the hindrance between two phenyl rings at C3 and C4.The crystal packing (Fig. 2) is stabilized by weak non-classical intermolecular C–H···O hydrogen bonds; the first one between the pyrrolidone H atom and the oxygen of the nitro group, with a C8–H8A···O3i, and the second one between an H atom of the methoxy group and the oxygen of the C═O unit, with a C28–H28A···O1ii, respectively (Table 1).
For bioactive compounds, see: Walling et al. (1988); Liu et al. (2006, 2008). For microwave-assisted intramolecular Diels–Alder
see: Wang et al. (2009); Wu et al. (2006, 2007). For the synthesis of title compound, see: Wu et al. (2009).Data collection: PROCESS-AUTO (Rigaku, 2006); cell
PROCESS-AUTO (Rigaku, 2006); data reduction: CrystalStructure (Rigaku, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).C28H26N2O4 | Z = 2 |
Mr = 454.51 | F(000) = 480 |
Triclinic, P1 | Dx = 1.290 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.4369 (4) Å | Cell parameters from 7298 reflections |
b = 12.2662 (7) Å | θ = 3.1–27.4° |
c = 18.149 (1) Å | µ = 0.09 mm−1 |
α = 79.633 (1)° | T = 296 K |
β = 84.036 (2)° | Block, colorless |
γ = 80.325 (2)° | 0.37 × 0.31 × 0.18 mm |
V = 1170.25 (13) Å3 |
Rigaku R-AXIS RAPID diffractometer | 5285 independent reflections |
Radiation source: rotating anode | 3402 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
Detector resolution: 10.00 pixels mm-1 | θmax = 27.4°, θmin = 3.1° |
ω scans | h = −7→7 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −15→15 |
Tmin = 0.967, Tmax = 0.985 | l = −23→23 |
11469 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | H-atom parameters constrained |
wR(F2) = 0.123 | w = 1/[σ2(Fo2) + (0.041P)2 + 0.4229P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
5285 reflections | Δρmax = 0.23 e Å−3 |
309 parameters | Δρmin = −0.22 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.030 (2) |
C28H26N2O4 | γ = 80.325 (2)° |
Mr = 454.51 | V = 1170.25 (13) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.4369 (4) Å | Mo Kα radiation |
b = 12.2662 (7) Å | µ = 0.09 mm−1 |
c = 18.149 (1) Å | T = 296 K |
α = 79.633 (1)° | 0.37 × 0.31 × 0.18 mm |
β = 84.036 (2)° |
Rigaku R-AXIS RAPID diffractometer | 5285 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 3402 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.985 | Rint = 0.024 |
11469 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.123 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.23 e Å−3 |
5285 reflections | Δρmin = −0.22 e Å−3 |
309 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3920 (3) | 0.60330 (10) | 0.32284 (8) | 0.0562 (4) | |
C3 | −0.0091 (3) | 0.63563 (13) | 0.20272 (9) | 0.0372 (4) | |
H3 | −0.1434 | 0.6128 | 0.2396 | 0.045* | |
C9 | 0.0145 (3) | 0.75414 (13) | 0.21103 (9) | 0.0354 (4) | |
O4 | −0.0827 (3) | 0.11519 (11) | 0.56486 (8) | 0.0626 (4) | |
C10 | −0.1747 (3) | 0.81473 (14) | 0.25156 (10) | 0.0437 (4) | |
H10 | −0.3107 | 0.7810 | 0.2743 | 0.052* | |
C4 | −0.0937 (3) | 0.62877 (14) | 0.12304 (10) | 0.0403 (4) | |
H4 | −0.2705 | 0.6622 | 0.1227 | 0.048* | |
C2 | 0.2183 (3) | 0.54638 (12) | 0.21746 (9) | 0.0345 (4) | |
H2 | 0.3394 | 0.5560 | 0.1738 | 0.041* | |
N1 | 0.4524 (3) | 0.42079 (11) | 0.30303 (8) | 0.0451 (4) | |
C13 | 0.2321 (3) | 0.91472 (14) | 0.18609 (10) | 0.0422 (4) | |
H13 | 0.3688 | 0.9486 | 0.1643 | 0.051* | |
C14 | 0.2179 (3) | 0.80600 (13) | 0.17894 (10) | 0.0410 (4) | |
H14 | 0.3471 | 0.7665 | 0.1521 | 0.049* | |
C25 | 0.0719 (4) | 0.18191 (15) | 0.52078 (10) | 0.0463 (4) | |
C11 | −0.1642 (4) | 0.92434 (15) | 0.25872 (11) | 0.0510 (5) | |
H11 | −0.2930 | 0.9648 | 0.2851 | 0.061* | |
C12 | 0.0403 (3) | 0.97220 (13) | 0.22604 (10) | 0.0429 (4) | |
C15 | 0.0421 (3) | 0.69472 (14) | 0.05692 (10) | 0.0417 (4) | |
C1 | 0.3594 (3) | 0.53126 (13) | 0.28773 (9) | 0.0391 (4) | |
C26 | 0.0549 (4) | 0.29610 (15) | 0.51910 (11) | 0.0532 (5) | |
H26 | −0.0676 | 0.3333 | 0.5494 | 0.064* | |
C5 | −0.0810 (3) | 0.50875 (15) | 0.11146 (11) | 0.0454 (4) | |
H5 | −0.1559 | 0.4971 | 0.0703 | 0.054* | |
C7 | 0.1409 (3) | 0.43048 (13) | 0.22418 (10) | 0.0415 (4) | |
H7 | 0.0091 | 0.4250 | 0.2652 | 0.050* | |
C22 | 0.4095 (3) | 0.30153 (14) | 0.42622 (10) | 0.0444 (4) | |
C6 | 0.0281 (3) | 0.41877 (15) | 0.15518 (11) | 0.0473 (4) | |
H6 | 0.0342 | 0.3481 | 0.1427 | 0.057* | |
N2 | 0.0562 (4) | 1.08752 (13) | 0.23437 (11) | 0.0613 (5) | |
C27 | 0.2232 (4) | 0.35445 (15) | 0.47165 (11) | 0.0531 (5) | |
H27 | 0.2107 | 0.4313 | 0.4703 | 0.064* | |
C24 | 0.2572 (4) | 0.12738 (15) | 0.47615 (11) | 0.0541 (5) | |
H24 | 0.2693 | 0.0505 | 0.4774 | 0.065* | |
O2 | −0.1207 (4) | 1.14155 (13) | 0.26491 (12) | 0.0936 (6) | |
C23 | 0.4236 (4) | 0.18681 (15) | 0.42990 (11) | 0.0518 (5) | |
H23 | 0.5482 | 0.1491 | 0.4005 | 0.062* | |
C8 | 0.3733 (4) | 0.35368 (14) | 0.25297 (11) | 0.0486 (5) | |
H8A | 0.3336 | 0.2824 | 0.2802 | 0.058* | |
H8B | 0.4999 | 0.3405 | 0.2124 | 0.058* | |
O3 | 0.2473 (4) | 1.12510 (13) | 0.20977 (13) | 0.0982 (7) | |
C20 | 0.2721 (4) | 0.65034 (17) | 0.02460 (10) | 0.0491 (4) | |
H20 | 0.3444 | 0.5777 | 0.0433 | 0.059* | |
C21 | 0.5791 (4) | 0.36794 (16) | 0.37105 (11) | 0.0507 (5) | |
H21A | 0.6282 | 0.4253 | 0.3944 | 0.061* | |
H21B | 0.7294 | 0.3185 | 0.3575 | 0.061* | |
C16 | −0.0606 (4) | 0.80281 (17) | 0.02643 (12) | 0.0608 (5) | |
H16 | −0.2147 | 0.8347 | 0.0465 | 0.073* | |
C28 | −0.2937 (4) | 0.16809 (19) | 0.60542 (12) | 0.0601 (5) | |
H28A | −0.2378 | 0.2032 | 0.6425 | 0.090* | |
H28B | −0.3949 | 0.1130 | 0.6297 | 0.090* | |
H28C | −0.3906 | 0.2238 | 0.5714 | 0.090* | |
C19 | 0.3949 (5) | 0.7124 (2) | −0.03484 (12) | 0.0679 (6) | |
H19 | 0.5496 | 0.6816 | −0.0551 | 0.081* | |
C17 | 0.0632 (6) | 0.8639 (2) | −0.03356 (14) | 0.0801 (8) | |
H17 | −0.0087 | 0.9362 | −0.0533 | 0.096* | |
C18 | 0.2906 (6) | 0.8187 (2) | −0.06392 (14) | 0.0814 (8) | |
H18 | 0.3733 | 0.8601 | −0.1040 | 0.098* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0704 (9) | 0.0431 (7) | 0.0610 (8) | −0.0104 (6) | −0.0178 (7) | −0.0151 (6) |
C3 | 0.0321 (9) | 0.0353 (8) | 0.0455 (9) | −0.0097 (7) | 0.0068 (7) | −0.0113 (7) |
C9 | 0.0323 (9) | 0.0350 (8) | 0.0391 (9) | −0.0052 (6) | 0.0006 (7) | −0.0089 (7) |
O4 | 0.0693 (10) | 0.0519 (8) | 0.0665 (9) | −0.0207 (7) | 0.0211 (7) | −0.0142 (7) |
C10 | 0.0363 (9) | 0.0427 (9) | 0.0534 (10) | −0.0074 (7) | 0.0062 (8) | −0.0157 (8) |
C4 | 0.0284 (9) | 0.0415 (9) | 0.0527 (10) | −0.0055 (7) | −0.0021 (7) | −0.0126 (8) |
C2 | 0.0352 (9) | 0.0305 (8) | 0.0378 (8) | −0.0085 (6) | 0.0042 (7) | −0.0062 (7) |
N1 | 0.0567 (10) | 0.0342 (7) | 0.0440 (8) | −0.0094 (7) | −0.0054 (7) | −0.0021 (6) |
C13 | 0.0399 (10) | 0.0366 (8) | 0.0505 (10) | −0.0101 (7) | −0.0004 (8) | −0.0058 (8) |
C14 | 0.0325 (9) | 0.0373 (8) | 0.0536 (10) | −0.0056 (7) | 0.0066 (7) | −0.0143 (8) |
C25 | 0.0514 (11) | 0.0427 (9) | 0.0447 (10) | −0.0115 (8) | 0.0029 (8) | −0.0067 (8) |
C11 | 0.0441 (11) | 0.0470 (10) | 0.0634 (12) | −0.0027 (8) | 0.0085 (9) | −0.0240 (9) |
C12 | 0.0482 (11) | 0.0302 (8) | 0.0516 (10) | −0.0028 (7) | −0.0070 (8) | −0.0116 (8) |
C15 | 0.0423 (10) | 0.0425 (9) | 0.0439 (9) | −0.0097 (7) | −0.0091 (8) | −0.0105 (8) |
C1 | 0.0404 (10) | 0.0347 (8) | 0.0430 (9) | −0.0122 (7) | 0.0042 (7) | −0.0065 (7) |
C26 | 0.0549 (12) | 0.0434 (10) | 0.0580 (12) | −0.0023 (9) | 0.0089 (9) | −0.0120 (9) |
C5 | 0.0419 (10) | 0.0475 (10) | 0.0535 (10) | −0.0161 (8) | −0.0042 (8) | −0.0175 (9) |
C7 | 0.0470 (10) | 0.0330 (8) | 0.0467 (10) | −0.0144 (7) | 0.0051 (8) | −0.0093 (7) |
C22 | 0.0454 (11) | 0.0403 (9) | 0.0446 (10) | −0.0052 (8) | −0.0064 (8) | 0.0014 (8) |
C6 | 0.0497 (11) | 0.0393 (9) | 0.0590 (11) | −0.0180 (8) | 0.0013 (9) | −0.0175 (9) |
N2 | 0.0682 (12) | 0.0380 (8) | 0.0807 (13) | −0.0074 (8) | −0.0033 (10) | −0.0200 (9) |
C27 | 0.0619 (13) | 0.0339 (9) | 0.0602 (12) | −0.0049 (8) | 0.0016 (10) | −0.0055 (9) |
C24 | 0.0660 (13) | 0.0351 (9) | 0.0590 (12) | −0.0079 (9) | 0.0096 (10) | −0.0097 (9) |
O2 | 0.0970 (14) | 0.0506 (9) | 0.1350 (16) | −0.0010 (9) | 0.0198 (12) | −0.0457 (10) |
C23 | 0.0573 (12) | 0.0421 (10) | 0.0519 (11) | −0.0028 (8) | 0.0080 (9) | −0.0081 (9) |
C8 | 0.0625 (12) | 0.0324 (8) | 0.0509 (11) | −0.0080 (8) | −0.0036 (9) | −0.0069 (8) |
O3 | 0.0893 (13) | 0.0558 (9) | 0.1607 (19) | −0.0331 (9) | 0.0210 (13) | −0.0445 (11) |
C20 | 0.0476 (11) | 0.0564 (11) | 0.0470 (10) | −0.0139 (9) | −0.0005 (8) | −0.0146 (9) |
C21 | 0.0492 (11) | 0.0485 (10) | 0.0512 (11) | −0.0102 (8) | −0.0058 (9) | 0.0035 (9) |
C16 | 0.0701 (14) | 0.0524 (11) | 0.0585 (12) | −0.0043 (10) | −0.0128 (11) | −0.0055 (10) |
C28 | 0.0536 (13) | 0.0750 (14) | 0.0512 (12) | −0.0146 (10) | 0.0070 (10) | −0.0106 (10) |
C19 | 0.0690 (15) | 0.0910 (17) | 0.0500 (12) | −0.0321 (13) | 0.0083 (11) | −0.0174 (12) |
C17 | 0.121 (2) | 0.0580 (13) | 0.0596 (14) | −0.0195 (14) | −0.0225 (15) | 0.0097 (11) |
C18 | 0.106 (2) | 0.0889 (18) | 0.0527 (14) | −0.0455 (17) | −0.0008 (14) | 0.0034 (13) |
O1—C1 | 1.2235 (19) | C26—H26 | 0.9300 |
C3—C9 | 1.516 (2) | C5—C6 | 1.328 (3) |
C3—C2 | 1.519 (2) | C5—H5 | 0.9300 |
C3—C4 | 1.583 (2) | C7—C6 | 1.489 (2) |
C3—H3 | 0.9800 | C7—C8 | 1.522 (3) |
C9—C10 | 1.391 (2) | C7—H7 | 0.9800 |
C9—C14 | 1.392 (2) | C22—C23 | 1.386 (2) |
O4—C25 | 1.368 (2) | C22—C27 | 1.388 (3) |
O4—C28 | 1.423 (2) | C22—C21 | 1.511 (2) |
C10—C11 | 1.385 (2) | C6—H6 | 0.9300 |
C10—H10 | 0.9300 | N2—O2 | 1.216 (2) |
C4—C5 | 1.513 (2) | N2—O3 | 1.217 (2) |
C4—C15 | 1.519 (2) | C27—H27 | 0.9300 |
C4—H4 | 0.9800 | C24—C23 | 1.378 (3) |
C2—C1 | 1.523 (2) | C24—H24 | 0.9300 |
C2—C7 | 1.530 (2) | C23—H23 | 0.9300 |
C2—H2 | 0.9800 | C8—H8A | 0.9700 |
N1—C1 | 1.354 (2) | C8—H8B | 0.9700 |
N1—C8 | 1.469 (2) | C20—C19 | 1.384 (3) |
N1—C21 | 1.469 (2) | C20—H20 | 0.9300 |
C13—C12 | 1.375 (2) | C21—H21A | 0.9700 |
C13—C14 | 1.378 (2) | C21—H21B | 0.9700 |
C13—H13 | 0.9300 | C16—C17 | 1.387 (3) |
C14—H14 | 0.9300 | C16—H16 | 0.9300 |
C25—C26 | 1.383 (2) | C28—H28A | 0.9600 |
C25—C24 | 1.385 (3) | C28—H28B | 0.9600 |
C11—C12 | 1.375 (2) | C28—H28C | 0.9600 |
C11—H11 | 0.9300 | C19—C18 | 1.366 (4) |
C12—N2 | 1.467 (2) | C19—H19 | 0.9300 |
C15—C16 | 1.388 (3) | C17—C18 | 1.370 (4) |
C15—C20 | 1.392 (3) | C17—H17 | 0.9300 |
C26—C27 | 1.387 (3) | C18—H18 | 0.9300 |
C9—C3—C2 | 117.16 (13) | C6—C7—C2 | 111.36 (14) |
C9—C3—C4 | 112.57 (13) | C8—C7—C2 | 101.77 (13) |
C2—C3—C4 | 107.27 (12) | C6—C7—H7 | 106.7 |
C9—C3—H3 | 106.4 | C8—C7—H7 | 106.7 |
C2—C3—H3 | 106.4 | C2—C7—H7 | 106.7 |
C4—C3—H3 | 106.4 | C23—C22—C27 | 117.55 (17) |
C10—C9—C14 | 118.12 (15) | C23—C22—C21 | 121.30 (17) |
C10—C9—C3 | 119.26 (14) | C27—C22—C21 | 121.02 (16) |
C14—C9—C3 | 122.61 (14) | C5—C6—C7 | 120.34 (15) |
C25—O4—C28 | 117.97 (15) | C5—C6—H6 | 119.8 |
C11—C10—C9 | 121.17 (16) | C7—C6—H6 | 119.8 |
C11—C10—H10 | 119.4 | O2—N2—O3 | 122.85 (17) |
C9—C10—H10 | 119.4 | O2—N2—C12 | 119.12 (18) |
C5—C4—C15 | 110.34 (14) | O3—N2—C12 | 118.03 (17) |
C5—C4—C3 | 111.94 (14) | C26—C27—C22 | 121.97 (17) |
C15—C4—C3 | 114.83 (13) | C26—C27—H27 | 119.0 |
C5—C4—H4 | 106.4 | C22—C27—H27 | 119.0 |
C15—C4—H4 | 106.4 | C23—C24—C25 | 120.09 (17) |
C3—C4—H4 | 106.4 | C23—C24—H24 | 120.0 |
C3—C2—C1 | 122.36 (13) | C25—C24—H24 | 120.0 |
C3—C2—C7 | 109.16 (13) | C24—C23—C22 | 121.43 (17) |
C1—C2—C7 | 101.14 (13) | C24—C23—H23 | 119.3 |
C3—C2—H2 | 107.8 | C22—C23—H23 | 119.3 |
C1—C2—H2 | 107.8 | N1—C8—C7 | 100.71 (13) |
C7—C2—H2 | 107.8 | N1—C8—H8A | 111.6 |
C1—N1—C8 | 113.54 (14) | C7—C8—H8A | 111.6 |
C1—N1—C21 | 123.90 (15) | N1—C8—H8B | 111.6 |
C8—N1—C21 | 121.57 (14) | C7—C8—H8B | 111.6 |
C12—C13—C14 | 118.76 (16) | H8A—C8—H8B | 109.4 |
C12—C13—H13 | 120.6 | C19—C20—C15 | 121.2 (2) |
C14—C13—H13 | 120.6 | C19—C20—H20 | 119.4 |
C13—C14—C9 | 121.40 (16) | C15—C20—H20 | 119.4 |
C13—C14—H14 | 119.3 | N1—C21—C22 | 110.87 (15) |
C9—C14—H14 | 119.3 | N1—C21—H21A | 109.5 |
O4—C25—C26 | 124.70 (17) | C22—C21—H21A | 109.5 |
O4—C25—C24 | 115.44 (16) | N1—C21—H21B | 109.5 |
C26—C25—C24 | 119.85 (17) | C22—C21—H21B | 109.5 |
C12—C11—C10 | 118.70 (16) | H21A—C21—H21B | 108.1 |
C12—C11—H11 | 120.7 | C17—C16—C15 | 120.9 (2) |
C10—C11—H11 | 120.7 | C17—C16—H16 | 119.5 |
C13—C12—C11 | 121.85 (15) | C15—C16—H16 | 119.5 |
C13—C12—N2 | 118.85 (16) | O4—C28—H28A | 109.5 |
C11—C12—N2 | 119.30 (16) | O4—C28—H28B | 109.5 |
C16—C15—C20 | 117.41 (18) | H28A—C28—H28B | 109.5 |
C16—C15—C4 | 120.60 (17) | O4—C28—H28C | 109.5 |
C20—C15—C4 | 121.99 (16) | H28A—C28—H28C | 109.5 |
O1—C1—N1 | 125.80 (17) | H28B—C28—H28C | 109.5 |
O1—C1—C2 | 128.05 (15) | C18—C19—C20 | 120.5 (2) |
N1—C1—C2 | 106.10 (13) | C18—C19—H19 | 119.8 |
C25—C26—C27 | 119.10 (17) | C20—C19—H19 | 119.8 |
C25—C26—H26 | 120.5 | C18—C17—C16 | 120.5 (2) |
C27—C26—H26 | 120.5 | C18—C17—H17 | 119.7 |
C6—C5—C4 | 125.40 (16) | C16—C17—H17 | 119.7 |
C6—C5—H5 | 117.3 | C19—C18—C17 | 119.5 (2) |
C4—C5—H5 | 117.3 | C19—C18—H18 | 120.2 |
C6—C7—C8 | 122.74 (15) | C17—C18—H18 | 120.2 |
C2—C3—C9—C10 | −132.93 (17) | C15—C4—C5—C6 | 117.7 (2) |
C4—C3—C9—C10 | 102.00 (18) | C3—C4—C5—C6 | −11.5 (2) |
C2—C3—C9—C14 | 47.7 (2) | C3—C2—C7—C6 | 57.77 (18) |
C4—C3—C9—C14 | −77.3 (2) | C1—C2—C7—C6 | −172.00 (14) |
C14—C9—C10—C11 | 1.3 (3) | C3—C2—C7—C8 | −169.81 (14) |
C3—C9—C10—C11 | −178.11 (17) | C1—C2—C7—C8 | −39.58 (16) |
C9—C3—C4—C5 | 171.91 (14) | C4—C5—C6—C7 | 3.0 (3) |
C2—C3—C4—C5 | 41.60 (17) | C8—C7—C6—C5 | −146.39 (18) |
C9—C3—C4—C15 | 45.10 (19) | C2—C7—C6—C5 | −25.6 (2) |
C2—C3—C4—C15 | −85.20 (16) | C13—C12—N2—O2 | 174.7 (2) |
C9—C3—C2—C1 | 49.5 (2) | C11—C12—N2—O2 | −5.7 (3) |
C4—C3—C2—C1 | 177.21 (13) | C13—C12—N2—O3 | −4.9 (3) |
C9—C3—C2—C7 | 167.06 (14) | C11—C12—N2—O3 | 174.6 (2) |
C4—C3—C2—C7 | −65.26 (16) | C25—C26—C27—C22 | −0.5 (3) |
C12—C13—C14—C9 | 0.2 (3) | C23—C22—C27—C26 | −0.3 (3) |
C10—C9—C14—C13 | −0.7 (3) | C21—C22—C27—C26 | 175.68 (18) |
C3—C9—C14—C13 | 178.63 (16) | O4—C25—C24—C23 | −179.69 (18) |
C28—O4—C25—C26 | 7.7 (3) | C26—C25—C24—C23 | −0.3 (3) |
C28—O4—C25—C24 | −172.98 (18) | C25—C24—C23—C22 | −0.6 (3) |
C9—C10—C11—C12 | −1.2 (3) | C27—C22—C23—C24 | 0.8 (3) |
C14—C13—C12—C11 | −0.1 (3) | C21—C22—C23—C24 | −175.12 (18) |
C14—C13—C12—N2 | 179.39 (17) | C1—N1—C8—C7 | −20.81 (19) |
C10—C11—C12—C13 | 0.7 (3) | C21—N1—C8—C7 | 148.23 (16) |
C10—C11—C12—N2 | −178.85 (17) | C6—C7—C8—N1 | 161.81 (15) |
C5—C4—C15—C16 | 137.20 (17) | C2—C7—C8—N1 | 36.61 (16) |
C3—C4—C15—C16 | −95.2 (2) | C16—C15—C20—C19 | 1.0 (3) |
C5—C4—C15—C20 | −42.9 (2) | C4—C15—C20—C19 | −178.91 (16) |
C3—C4—C15—C20 | 84.73 (19) | C1—N1—C21—C22 | 104.26 (19) |
C8—N1—C1—O1 | 177.63 (17) | C8—N1—C21—C22 | −63.6 (2) |
C21—N1—C1—O1 | 8.9 (3) | C23—C22—C21—N1 | 96.9 (2) |
C8—N1—C1—C2 | −4.52 (19) | C27—C22—C21—N1 | −79.0 (2) |
C21—N1—C1—C2 | −173.27 (15) | C20—C15—C16—C17 | −0.5 (3) |
C3—C2—C1—O1 | −33.0 (3) | C4—C15—C16—C17 | 179.46 (18) |
C7—C2—C1—O1 | −154.41 (18) | C15—C20—C19—C18 | −1.0 (3) |
C3—C2—C1—N1 | 149.18 (14) | C15—C16—C17—C18 | −0.2 (4) |
C7—C2—C1—N1 | 27.81 (16) | C20—C19—C18—C17 | 0.3 (4) |
O4—C25—C26—C27 | −179.84 (19) | C16—C17—C18—C19 | 0.2 (4) |
C24—C25—C26—C27 | 0.8 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8A···O3i | 0.97 | 2.63 | 3.239 (2) | 122 |
C28—H28A···O1ii | 0.96 | 2.55 | 3.242 (2) | 129 |
Symmetry codes: (i) x, y−1, z; (ii) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C28H26N2O4 |
Mr | 454.51 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 5.4369 (4), 12.2662 (7), 18.149 (1) |
α, β, γ (°) | 79.633 (1), 84.036 (2), 80.325 (2) |
V (Å3) | 1170.25 (13) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.37 × 0.31 × 0.18 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.967, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11469, 5285, 3402 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.648 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.123, 1.01 |
No. of reflections | 5285 |
No. of parameters | 309 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.22 |
Computer programs: PROCESS-AUTO (Rigaku, 2006), CrystalStructure (Rigaku, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8A···O3i | 0.97 | 2.63 | 3.239 (2) | 121.5 |
C28—H28A···O1ii | 0.96 | 2.55 | 3.242 (2) | 129.3 |
Symmetry codes: (i) x, y−1, z; (ii) −x, −y+1, −z+1. |
Acknowledgements
This work was supported by a research grant from the Natural Science Foundation of China (grant No. 20572092). Professor Wei-Min Dai is thanked for his valuable suggestions on this work. Mr Jianming Gu of the X-ray crystallography facility of Zhejiang University is acknowledged for his assistance with the crystal structural analysis.
References
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Liu, R., Gu, Q., Zhu, W., Cui, C., Fan, G., Fang, Y., Zhu, T. & Liu, H. (2006). J. Nat. Prod. 69, 871–875. Web of Science CSD CrossRef PubMed CAS Google Scholar
Liu, R., Lin, Z., Zhu, T., Fang, Y., Gu, Q. & Zhu, W. (2008). J. Nat. Prod. 71, 1127–1132. Web of Science CrossRef PubMed CAS Google Scholar
Rigaku (2006). PROCESS-AUTO. Rigaku Corporation, Tokyo, Japan Google Scholar
Rigaku (2007). CrystalStructure. Rigaku Americas, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Walling, E. A., Drafft, G. A. & Ware, B. R. (1988). Arch. Biochem. Biophys. 264, 321–332. CrossRef CAS PubMed Web of Science Google Scholar
Wang, Y., Wu, J. & Dai, W.-M. (2009). Synlett, pp. 2862–2866. Google Scholar
Wu, J., Sun, L. & Dai, W.-M. (2006). Tetrahedron, 62, 8360–8372. Web of Science CSD CrossRef CAS Google Scholar
Wu, J., Yu, H., Wang, Y., Xing, X. & Dai, W.-M. (2007). Tetrahedron Lett. 48, 6543–6547. Web of Science CSD CrossRef CAS Google Scholar
Wu, J., Zhao, J. & Dai, W.-M. (2009). CN Patent Appl. CN 200910100757.7. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound, C28H26N2O4, has a hexahydro-1H-isoindolone core, which is present in both synthetic and naturally occurring bioactive compounds (Walling et al., 1988 and Liu et al., 2006, 2008). The title compound has recently been obtained during microwave-assisted intramolecular Diels-Alder cycloaddition along with a minor diastereomer with a 82:18 diastereomeric ratio (Wang et al., 2009; Wu et al., 2006, 2007, 2009). The compound has four stereogenic centers but crystallizes as a racemate as indicated by the centrosymmetric space group. Here we report the crystal structure of the title compound (Fig. 1).
In the crystal structure of the title compound, there are one pyrrolidone ring and one cyclohexene ring. The pyrrolidone ring C1-C2/C7-C8/N1 adopts envelope conformation, whereas the cyclohexene ring C2-C7 has a twisted envelope conformation. Bond length of C3–C4 is larger than normal C–C single bond because of the hindrance between two phenyl rings at C3 and C4.
The crystal packing (Fig. 2) is stabilized by weak non-classical intermolecular C–H···O hydrogen bonds; the first one between the pyrrolidone H atom and the oxygen of the nitro group, with a C8–H8A···O3i, and the second one between an H atom of the methoxy group and the oxygen of the C═O unit, with a C28–H28A···O1ii, respectively (Table 1).