organic compounds
Redetermination of 5α-androstane-3,17-dione
aDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA, bDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA, cDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India, and dDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, 574 199, India
*Correspondence e-mail: jjasinski@keene.edu
The structure of the title compound, C19H28O2, has been redermined at 295 (2) K, with much improved precision. The structure and molecular packing of the title compound was first reported by Coiro et al. [Acta Cryst. (1973). B29, 1404–1409] by means of potential-energy calculations. The cell parameters in this study differ considerably in C2. It is a derivative of testosterone and consists of a cyclopentanone ring (A) fused to to successive cyclohexane (B and C) and cyclohexanone (D) rings. The three cyclohexanone rings are in slightly distorted boat configurations and the cyclopentanone ring is a distorted half-chair. The crystal packing is stabilized by weak intermolecular C—H⋯O interactions involving O atoms from each of the cyclohexanone and cyclopentanone rings and H atoms from each of their respective rings.
Related literature
For biotransformation studies, see: Fiorentino et al. (1991). For the previous report of this structure, see: Coiro et al. (1973); For related structures, see: Anthony et al. (1998); Jasinski et al. (2009); Norton et al. (1962); Ohrt et al. (1965). For bond-length data, see: Allen et al. (1987). For puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810019720/om2341sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810019720/om2341Isup2.hkl
The title compound was obtained as a gift sample from R. L. Fine Chem., Bangalore, India. The compound was used without further purification. X-ray quality crystals were obtained from slow evaporation of acetone solution (m.p.: 373–375 K).
All of the H atoms were placed in their calculated positions and then refined using the riding model with C—H = 0.96–0.98 Å, and with Uiso(H) = 1.18–1.50Ueq(C).
The title compound, C19H28O2 (systematic iupac name: (8R,9S,10R,13S,14S)-10,13-Dimethyl-1,2,4,5,6,7,8,9,11,12,14,15,16- tridecahydrocyclopenta[a]phenanthrane-3,17-dione or dodecahydro-10,13-dimethyl-2H-cyclopenta[a]phenanthrene-3,17(4H,14H)-dione) is a derivative of testosterone. The β = 106.444 (5)° with an R-factor of 3.86% at 295 K. The of 5β-androstane-3,17-dione is already reported (Norton et al., 1962; Anthony et al., 1998). The biotransformation of 5α-androstane-3,17-dione by microalgal cultures is reported (Fiorentino et al., 1991). We have recently reported the of 3-oxo-4-aza-5-alpha-androstone-17b-tert -butyl carboxamide (Jasinski et al., 2009). In view of the importance of and taking into account the importance of the title compound, this paper reports the redetermination of its with an improved precision.
of the title compound (CSD code: ANDION10) was first reported by Coiro et al. (1973) with cell parameters of a = 12.700 (20); b = 6.190 (10); c = 21.340 (30) Å; c = 91.27 (10)° and an R-factor of 12% at T = 295 K. These values coincide with those reported earlier (Ohrt et al., 1965). How ever in the present investigations, the cell parameters are a = 12.7786 (6); b = 6.7850 (4); c = 19.6242 (10) Å andThe title compound, C19H28O2, consists of a cyclopentanone ring (A) fused to to successive cyclohexane (B & C) and cyclohexanone (D) rings. The three cyclohexanone rings are in slightly distorted chair configurations with Cremer & Pople (1975) puckering parameters Q, θ and φ of 0.530 (2) Å, 9.5 (2)° & 3.5 (13)°, for A, 0.5778 (19) Å, 5.77 (19)° & 344.7 (19)°, for B, and 0.5697 (19) Å, 173.01 (19)° & 65.5 (16)°,for C, respectively (Fig. 1). For an ideal chair θ has a value of 0 or 180°. The cyclopentanone ring is a distorted half-chair, phi(2) = 22.5 (3)°. For an ideal half-chair, phi(2) = k x 36 + 18. The crystal packing is stabilized by weak intermolecular C–H···O interactions between a hydrogen atom from the cyclohexanone ring (H5A) with an oxygen atom from a nearby cyclohexanone ring (O1) and between a hydrogen atom from the cyclopentanone ring (H16A) with an oxygen atom from a nearby cyclopentanone ring (O2), respectively (Fig. 2, Table 1).
For biotransformation studies, see: Fiorentino et al. (1991). For the previous report of this structure, see: Coiro et al. (1973); For related structures, see: Anthony et al. (1998); Jasinski et al. (2009); Norton et al. (1962); Ohrt et al. (1965). For bond-length data, see: Allen et al. (1987). For puckering parameters, see: Cremer & Pople (1975).
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Molecular structure of C19H28O2, showing the atom labeling scheme and 50% probability displacement ellipsoids. | |
Fig. 2. Packing diagram of the title compound viewed down the b axis. |
C19H28O2 | F(000) = 632 |
Mr = 288.41 | Dx = 1.174 Mg m−3 |
Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2y | Cell parameters from 1842 reflections |
a = 12.7786 (6) Å | θ = 5.1–29.4° |
b = 6.7850 (4) Å | µ = 0.07 mm−1 |
c = 19.6242 (10) Å | T = 295 K |
β = 106.444 (5)° | Plate, colorless |
V = 1631.88 (15) Å3 | 0.53 × 0.35 × 0.15 mm |
Z = 4 |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2082 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1441 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 29.5°, θmin = 5.2° |
ω scans | h = −17→16 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | k = −7→9 |
Tmin = 0.881, Tmax = 0.989 | l = −22→24 |
4151 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0558P)2] where P = (Fo2 + 2Fc2)/3 |
2082 reflections | (Δ/σ)max < 0.001 |
188 parameters | Δρmax = 0.16 e Å−3 |
1 restraint | Δρmin = −0.12 e Å−3 |
C19H28O2 | V = 1631.88 (15) Å3 |
Mr = 288.41 | Z = 4 |
Monoclinic, C2 | Mo Kα radiation |
a = 12.7786 (6) Å | µ = 0.07 mm−1 |
b = 6.7850 (4) Å | T = 295 K |
c = 19.6242 (10) Å | 0.53 × 0.35 × 0.15 mm |
β = 106.444 (5)° |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2082 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 1441 reflections with I > 2σ(I) |
Tmin = 0.881, Tmax = 0.989 | Rint = 0.020 |
4151 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 1 restraint |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 0.96 | Δρmax = 0.16 e Å−3 |
2082 reflections | Δρmin = −0.12 e Å−3 |
188 parameters |
Experimental. In the absence of anolmalous scattering effects Friedel opposites were merged. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.24755 (15) | −0.2050 (4) | 0.04123 (10) | 0.0831 (6) | |
O2 | 0.70862 (13) | 0.4649 (3) | 0.51542 (8) | 0.0661 (5) | |
C1 | 0.42695 (14) | 0.2013 (3) | 0.18578 (9) | 0.0343 (5) | |
C2 | 0.31200 (15) | 0.1301 (4) | 0.18422 (10) | 0.0463 (6) | |
H2A | 0.3186 | 0.0144 | 0.2141 | 0.056* | |
H2B | 0.2764 | 0.2322 | 0.2042 | 0.056* | |
C3 | 0.23997 (15) | 0.0794 (4) | 0.10955 (11) | 0.0517 (6) | |
H3A | 0.1721 | 0.0225 | 0.1131 | 0.062* | |
H3B | 0.2226 | 0.1994 | 0.0818 | 0.062* | |
C4 | 0.29440 (18) | −0.0622 (4) | 0.07223 (11) | 0.0524 (6) | |
C5 | 0.40981 (16) | −0.0152 (4) | 0.07567 (10) | 0.0499 (6) | |
H5A | 0.4108 | 0.0940 | 0.0439 | 0.060* | |
H5B | 0.4423 | −0.1282 | 0.0592 | 0.060* | |
C6 | 0.47906 (15) | 0.0392 (3) | 0.15109 (10) | 0.0409 (5) | |
H6A | 0.4821 | −0.0793 | 0.1801 | 0.049* | |
C7 | 0.59602 (15) | 0.0857 (4) | 0.15289 (10) | 0.0474 (6) | |
H7A | 0.5971 | 0.2011 | 0.1239 | 0.057* | |
H7B | 0.6262 | −0.0240 | 0.1329 | 0.057* | |
C8 | 0.66634 (15) | 0.1239 (4) | 0.22867 (10) | 0.0470 (6) | |
H8A | 0.7380 | 0.1673 | 0.2273 | 0.056* | |
H8B | 0.6754 | 0.0013 | 0.2551 | 0.056* | |
C9 | 0.61800 (14) | 0.2786 (3) | 0.26770 (10) | 0.0379 (5) | |
H9A | 0.6179 | 0.4062 | 0.2442 | 0.045* | |
C10 | 0.49888 (15) | 0.2242 (3) | 0.26409 (9) | 0.0354 (5) | |
H10A | 0.5024 | 0.0928 | 0.2853 | 0.043* | |
C11 | 0.44999 (15) | 0.3593 (4) | 0.31000 (10) | 0.0453 (6) | |
H11A | 0.4379 | 0.4889 | 0.2883 | 0.054* | |
H11B | 0.3797 | 0.3071 | 0.3108 | 0.054* | |
C12 | 0.52271 (16) | 0.3798 (4) | 0.38663 (10) | 0.0494 (6) | |
H12A | 0.4908 | 0.4743 | 0.4120 | 0.059* | |
H12B | 0.5279 | 0.2539 | 0.4108 | 0.059* | |
C13 | 0.63549 (15) | 0.4483 (3) | 0.38639 (9) | 0.0414 (5) | |
C14 | 0.68430 (14) | 0.2984 (4) | 0.34512 (10) | 0.0407 (5) | |
H14A | 0.6812 | 0.1698 | 0.3672 | 0.049* | |
C15 | 0.80574 (15) | 0.3562 (4) | 0.36433 (11) | 0.0566 (7) | |
H15A | 0.8504 | 0.2457 | 0.3583 | 0.068* | |
H15B | 0.8172 | 0.4654 | 0.3354 | 0.068* | |
C16 | 0.83153 (18) | 0.4161 (5) | 0.44290 (11) | 0.0575 (7) | |
H16A | 0.8722 | 0.3128 | 0.4732 | 0.069* | |
H16B | 0.8744 | 0.5362 | 0.4517 | 0.069* | |
C17 | 0.72336 (18) | 0.4479 (4) | 0.45736 (11) | 0.0492 (6) | |
C18 | 0.41689 (15) | 0.3991 (3) | 0.14581 (8) | 0.0457 (6) | |
H18A | 0.3770 | 0.3796 | 0.0969 | 0.069* | |
H18B | 0.4884 | 0.4484 | 0.1486 | 0.069* | |
H18C | 0.3790 | 0.4923 | 0.1670 | 0.069* | |
C19 | 0.63290 (18) | 0.6613 (3) | 0.35832 (8) | 0.0579 (6) | |
H19A | 0.6002 | 0.7465 | 0.3856 | 0.087* | |
H19B | 0.5909 | 0.6651 | 0.3093 | 0.087* | |
H19C | 0.7060 | 0.7046 | 0.3626 | 0.087* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0922 (13) | 0.0866 (15) | 0.0664 (12) | −0.0309 (13) | 0.0158 (9) | −0.0327 (12) |
O2 | 0.0834 (11) | 0.0740 (13) | 0.0335 (8) | 0.0045 (10) | 0.0042 (7) | −0.0029 (9) |
C1 | 0.0359 (9) | 0.0376 (12) | 0.0287 (10) | 0.0022 (9) | 0.0080 (7) | 0.0006 (9) |
C2 | 0.0453 (11) | 0.0547 (16) | 0.0382 (12) | −0.0025 (11) | 0.0108 (9) | −0.0039 (11) |
C3 | 0.0444 (11) | 0.0677 (18) | 0.0398 (12) | −0.0127 (12) | 0.0065 (9) | −0.0080 (12) |
C4 | 0.0608 (13) | 0.0567 (16) | 0.0332 (11) | −0.0103 (14) | 0.0029 (9) | −0.0024 (12) |
C5 | 0.0587 (13) | 0.0544 (16) | 0.0340 (11) | 0.0040 (12) | 0.0090 (9) | −0.0069 (11) |
C6 | 0.0471 (11) | 0.0378 (12) | 0.0354 (11) | 0.0026 (10) | 0.0079 (8) | −0.0010 (10) |
C7 | 0.0475 (11) | 0.0560 (16) | 0.0400 (12) | 0.0092 (12) | 0.0148 (9) | −0.0080 (11) |
C8 | 0.0383 (10) | 0.0544 (15) | 0.0481 (13) | 0.0069 (11) | 0.0117 (9) | −0.0061 (11) |
C9 | 0.0395 (10) | 0.0398 (13) | 0.0329 (10) | 0.0032 (10) | 0.0077 (8) | 0.0021 (9) |
C10 | 0.0400 (10) | 0.0353 (12) | 0.0293 (10) | 0.0012 (9) | 0.0071 (8) | 0.0014 (9) |
C11 | 0.0417 (10) | 0.0557 (15) | 0.0386 (11) | 0.0009 (11) | 0.0115 (8) | −0.0092 (11) |
C12 | 0.0562 (12) | 0.0582 (16) | 0.0351 (11) | 0.0015 (12) | 0.0150 (9) | −0.0058 (11) |
C13 | 0.0488 (11) | 0.0417 (13) | 0.0293 (10) | 0.0016 (11) | 0.0041 (8) | −0.0008 (10) |
C14 | 0.0426 (10) | 0.0389 (12) | 0.0371 (11) | 0.0008 (11) | 0.0056 (8) | 0.0035 (10) |
C15 | 0.0448 (11) | 0.073 (2) | 0.0465 (12) | −0.0008 (12) | 0.0040 (9) | 0.0025 (13) |
C16 | 0.0530 (12) | 0.0652 (18) | 0.0446 (12) | −0.0114 (13) | −0.0020 (9) | 0.0021 (13) |
C17 | 0.0635 (14) | 0.0407 (14) | 0.0354 (12) | −0.0027 (12) | 0.0012 (9) | 0.0036 (11) |
C18 | 0.0497 (11) | 0.0443 (14) | 0.0389 (11) | 0.0036 (11) | 0.0055 (8) | 0.0035 (11) |
C19 | 0.0737 (15) | 0.0435 (14) | 0.0460 (14) | −0.0014 (14) | 0.0000 (11) | −0.0005 (12) |
O1—C4 | 1.209 (3) | C9—H9A | 0.9800 |
O2—C17 | 1.212 (2) | C10—C11 | 1.536 (3) |
C1—C2 | 1.538 (3) | C10—H10A | 0.9800 |
C1—C6 | 1.541 (3) | C11—C12 | 1.534 (3) |
C1—C18 | 1.541 (3) | C11—H11A | 0.9700 |
C1—C10 | 1.559 (2) | C11—H11B | 0.9700 |
C2—C3 | 1.533 (3) | C12—C13 | 1.515 (3) |
C2—H2A | 0.9700 | C12—H12A | 0.9700 |
C2—H2B | 0.9700 | C12—H12B | 0.9700 |
C3—C4 | 1.494 (3) | C13—C17 | 1.521 (3) |
C3—H3A | 0.9700 | C13—C14 | 1.538 (3) |
C3—H3B | 0.9700 | C13—C19 | 1.544 |
C4—C5 | 1.492 (3) | C14—C15 | 1.540 (3) |
C5—C6 | 1.539 (3) | C14—H14A | 0.9800 |
C5—H5A | 0.9700 | C15—C16 | 1.538 (3) |
C5—H5B | 0.9700 | C15—H15A | 0.9700 |
C6—C7 | 1.518 (3) | C15—H15B | 0.9700 |
C6—H6A | 0.9800 | C16—C17 | 1.503 (3) |
C7—C8 | 1.526 (3) | C16—H16A | 0.9700 |
C7—H7A | 0.9700 | C16—H16B | 0.9700 |
C7—H7B | 0.9700 | C18—H18A | 0.9600 |
C8—C9 | 1.529 (3) | C18—H18B | 0.9600 |
C8—H8A | 0.9700 | C18—H18C | 0.9600 |
C8—H8B | 0.9700 | C19—H19A | 0.9600 |
C9—C14 | 1.522 (2) | C19—H19B | 0.9600 |
C9—C10 | 1.548 (2) | C19—H19C | 0.9600 |
C2—C1—C6 | 107.26 (17) | C11—C10—H10A | 105.7 |
C2—C1—C18 | 108.76 (16) | C9—C10—H10A | 105.7 |
C6—C1—C18 | 112.39 (15) | C1—C10—H10A | 105.7 |
C2—C1—C10 | 110.12 (14) | C12—C11—C10 | 113.26 (16) |
C6—C1—C10 | 107.39 (15) | C12—C11—H11A | 108.9 |
C18—C1—C10 | 110.84 (16) | C10—C11—H11A | 108.9 |
C3—C2—C1 | 113.65 (15) | C12—C11—H11B | 108.9 |
C3—C2—H2A | 108.8 | C10—C11—H11B | 108.9 |
C1—C2—H2A | 108.8 | H11A—C11—H11B | 107.7 |
C3—C2—H2B | 108.8 | C13—C12—C11 | 109.73 (15) |
C1—C2—H2B | 108.8 | C13—C12—H12A | 109.7 |
H2A—C2—H2B | 107.7 | C11—C12—H12A | 109.7 |
C4—C3—C2 | 112.10 (18) | C13—C12—H12B | 109.7 |
C4—C3—H3A | 109.2 | C11—C12—H12B | 109.7 |
C2—C3—H3A | 109.2 | H12A—C12—H12B | 108.2 |
C4—C3—H3B | 109.2 | C12—C13—C17 | 116.93 (17) |
C2—C3—H3B | 109.2 | C12—C13—C14 | 109.07 (18) |
H3A—C3—H3B | 107.9 | C17—C13—C14 | 100.18 (16) |
O1—C4—C5 | 122.5 (2) | C12—C13—C19 | 111.32 |
O1—C4—C3 | 122.0 (2) | C17—C13—C19 | 105.30 |
C5—C4—C3 | 115.6 (2) | C14—C13—C19 | 113.70 |
C4—C5—C6 | 112.76 (16) | C9—C14—C13 | 112.95 (16) |
C4—C5—H5A | 109.0 | C9—C14—C15 | 120.29 (16) |
C6—C5—H5A | 109.0 | C13—C14—C15 | 103.50 (18) |
C4—C5—H5B | 109.0 | C9—C14—H14A | 106.4 |
C6—C5—H5B | 109.0 | C13—C14—H14A | 106.4 |
H5A—C5—H5B | 107.8 | C15—C14—H14A | 106.4 |
C7—C6—C5 | 111.51 (16) | C16—C15—C14 | 103.17 (17) |
C7—C6—C1 | 112.77 (17) | C16—C15—H15A | 111.1 |
C5—C6—C1 | 113.16 (16) | C14—C15—H15A | 111.1 |
C7—C6—H6A | 106.3 | C16—C15—H15B | 111.1 |
C5—C6—H6A | 106.3 | C14—C15—H15B | 111.1 |
C1—C6—H6A | 106.3 | H15A—C15—H15B | 109.1 |
C6—C7—C8 | 111.24 (16) | C17—C16—C15 | 106.24 (17) |
C6—C7—H7A | 109.4 | C17—C16—H16A | 110.5 |
C8—C7—H7A | 109.4 | C15—C16—H16A | 110.5 |
C6—C7—H7B | 109.4 | C17—C16—H16B | 110.5 |
C8—C7—H7B | 109.4 | C15—C16—H16B | 110.5 |
H7A—C7—H7B | 108.0 | H16A—C16—H16B | 108.7 |
C7—C8—C9 | 113.24 (17) | O2—C17—C16 | 125.95 (19) |
C7—C8—H8A | 108.9 | O2—C17—C13 | 126.1 (2) |
C9—C8—H8A | 108.9 | C16—C17—C13 | 107.90 (17) |
C7—C8—H8B | 108.9 | C1—C18—H18A | 109.5 |
C9—C8—H8B | 108.9 | C1—C18—H18B | 109.5 |
H8A—C8—H8B | 107.7 | H18A—C18—H18B | 109.5 |
C14—C9—C8 | 111.77 (16) | C1—C18—H18C | 109.5 |
C14—C9—C10 | 109.20 (14) | H18A—C18—H18C | 109.5 |
C8—C9—C10 | 110.16 (17) | H18B—C18—H18C | 109.5 |
C14—C9—H9A | 108.5 | C13—C19—H19A | 109.5 |
C8—C9—H9A | 108.5 | C13—C19—H19B | 109.4 |
C10—C9—H9A | 108.5 | H19A—C19—H19B | 109.5 |
C11—C10—C9 | 112.88 (16) | C13—C19—H19C | 109.5 |
C11—C10—C1 | 114.42 (15) | H19A—C19—H19C | 109.5 |
C9—C10—C1 | 111.49 (14) | H19B—C19—H19C | 109.5 |
C6—C1—C2—C3 | −56.4 (3) | C6—C1—C10—C9 | 58.7 (2) |
C18—C1—C2—C3 | 65.4 (2) | C18—C1—C10—C9 | −64.4 (2) |
C10—C1—C2—C3 | −173.0 (2) | C9—C10—C11—C12 | −50.8 (2) |
C1—C2—C3—C4 | 52.7 (3) | C1—C10—C11—C12 | −179.73 (17) |
C2—C3—C4—O1 | 133.4 (2) | C10—C11—C12—C13 | 54.9 (3) |
C2—C3—C4—C5 | −46.8 (3) | C11—C12—C13—C17 | −171.28 (19) |
O1—C4—C5—C6 | −133.6 (2) | C11—C12—C13—C14 | −58.6 (2) |
C3—C4—C5—C6 | 46.6 (3) | C11—C12—C13—C19 | 67.6 |
C4—C5—C6—C7 | 179.9 (2) | C8—C9—C14—C13 | −178.12 (18) |
C4—C5—C6—C1 | −51.8 (3) | C10—C9—C14—C13 | −56.0 (2) |
C2—C1—C6—C7 | −176.75 (16) | C8—C9—C14—C15 | 59.1 (3) |
C18—C1—C6—C7 | 63.8 (2) | C10—C9—C14—C15 | −178.7 (2) |
C10—C1—C6—C7 | −58.4 (2) | C12—C13—C14—C9 | 61.7 (2) |
C2—C1—C6—C5 | 55.5 (2) | C17—C13—C14—C9 | −175.01 (17) |
C18—C1—C6—C5 | −64.0 (2) | C19—C13—C14—C9 | −63.2 |
C10—C1—C6—C5 | 173.87 (17) | C12—C13—C14—C15 | −166.62 (17) |
C5—C6—C7—C8 | −175.6 (2) | C17—C13—C14—C15 | −43.3 (2) |
C1—C6—C7—C8 | 55.8 (2) | C19—C13—C14—C15 | 68.5 |
C6—C7—C8—C9 | −52.4 (3) | C9—C14—C15—C16 | 164.6 (2) |
C7—C8—C9—C14 | 174.44 (19) | C13—C14—C15—C16 | 37.4 (2) |
C7—C8—C9—C10 | 52.8 (2) | C14—C15—C16—C17 | −16.2 (3) |
C14—C9—C10—C11 | 49.8 (2) | C15—C16—C17—O2 | 167.1 (3) |
C8—C9—C10—C11 | 172.87 (17) | C15—C16—C17—C13 | −11.1 (3) |
C14—C9—C10—C1 | −179.82 (18) | C12—C13—C17—O2 | −27.0 (3) |
C8—C9—C10—C1 | −56.7 (2) | C14—C13—C17—O2 | −144.6 (3) |
C2—C1—C10—C11 | −55.2 (2) | C19—C13—C17—O2 | 97.2 |
C6—C1—C10—C11 | −171.69 (18) | C12—C13—C17—C16 | 151.2 (2) |
C18—C1—C10—C11 | 65.2 (2) | C14—C13—C17—C16 | 33.6 (2) |
C2—C1—C10—C9 | 175.18 (19) | C19—C13—C17—C16 | −84.6 |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16A···O2i | 0.97 | 2.61 | 3.247 (3) | 123 |
C5—H5A···O1ii | 0.97 | 2.61 | 3.335 (3) | 131 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1; (ii) −x+1/2, y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C19H28O2 |
Mr | 288.41 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 295 |
a, b, c (Å) | 12.7786 (6), 6.7850 (4), 19.6242 (10) |
β (°) | 106.444 (5) |
V (Å3) | 1631.88 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.53 × 0.35 × 0.15 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Ruby Gemini |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.881, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4151, 2082, 1441 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.692 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.098, 0.96 |
No. of reflections | 2082 |
No. of parameters | 188 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.12 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16A···O2i | 0.97 | 2.61 | 3.247 (3) | 123.3 |
C5—H5A···O1ii | 0.97 | 2.61 | 3.335 (3) | 131.4 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1; (ii) −x+1/2, y+1/2, −z. |
Acknowledgements
RJB acknowledges the NSF MRI program (grant No. CHE-0619278) for funds to purchase the X-ray diffractometer. QNMHA thanks R. L. Fine Chem, Bangalore, for the gift sample of the title compound and HSY thanks the University of Mysore for the sanction of sabbatical leave.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound, C19H28O2 (systematic iupac name: (8R,9S,10R,13S,14S)-10,13-Dimethyl-1,2,4,5,6,7,8,9,11,12,14,15,16- tridecahydrocyclopenta[a]phenanthrane-3,17-dione or dodecahydro-10,13-dimethyl-2H-cyclopenta[a]phenanthrene-3,17(4H,14H)-dione) is a derivative of testosterone. The crystal structure of the title compound (CSD code: ANDION10) was first reported by Coiro et al. (1973) with cell parameters of a = 12.700 (20); b = 6.190 (10); c = 21.340 (30) Å; c = 91.27 (10)° and an R-factor of 12% at T = 295 K. These values coincide with those reported earlier (Ohrt et al., 1965). How ever in the present investigations, the cell parameters are a = 12.7786 (6); b = 6.7850 (4); c = 19.6242 (10) Å and β = 106.444 (5)° with an R-factor of 3.86% at 295 K. The crystal structure of 5β-androstane-3,17-dione is already reported (Norton et al., 1962; Anthony et al., 1998). The biotransformation of 5α-androstane-3,17-dione by microalgal cultures is reported (Fiorentino et al., 1991). We have recently reported the crystal structure of 3-oxo-4-aza-5-alpha-androstone-17b-tert -butyl carboxamide (Jasinski et al., 2009). In view of the importance of steroids and taking into account the importance of the title compound, this paper reports the redetermination of its crystal structure with an improved precision.
The title compound, C19H28O2, consists of a cyclopentanone ring (A) fused to to successive cyclohexane (B & C) and cyclohexanone (D) rings. The three cyclohexanone rings are in slightly distorted chair configurations with Cremer & Pople (1975) puckering parameters Q, θ and φ of 0.530 (2) Å, 9.5 (2)° & 3.5 (13)°, for A, 0.5778 (19) Å, 5.77 (19)° & 344.7 (19)°, for B, and 0.5697 (19) Å, 173.01 (19)° & 65.5 (16)°,for C, respectively (Fig. 1). For an ideal chair θ has a value of 0 or 180°. The cyclopentanone ring is a distorted half-chair, phi(2) = 22.5 (3)°. For an ideal half-chair, phi(2) = k x 36 + 18. The crystal packing is stabilized by weak intermolecular C–H···O interactions between a hydrogen atom from the cyclohexanone ring (H5A) with an oxygen atom from a nearby cyclohexanone ring (O1) and between a hydrogen atom from the cyclopentanone ring (H16A) with an oxygen atom from a nearby cyclopentanone ring (O2), respectively (Fig. 2, Table 1).