organic compounds
3-Butyl-2-phenyl-1,3-thiazolidine-1,4-dione
aDepartment of Physics–Chemistry, Henan Polytechnic University, Jiao Zuo 454000, People's Republic of China, and bDepartment of Medicine, Hebi College of Vocation and Technology, He Bi 458030, People's Republic of China
*Correspondence e-mail: wangqiang@hpu.edu.cn
In the title compound, C13H17NO2S, the thiazolidine-1,4-dione ring adopts an with the S atom lying 0.631 (4) Å out of the plane formed by the other four ring atoms; the phenyl ring is almost perpendicular [88.74 (8)°] with respect to the ring C—C—N—C atoms and the butyl chain is in a fully extended conformation. In the crystal, a supramolecular two-dimensional arrangement arises from weak intermolecular C—H⋯O interactions.
Related literature
For related structures, see: Wang et al. (2009); Xu et al. (2009). For synthetic procedures, see: Johnson et al. (1983); Srivastava et al. (2002).
Experimental
Crystal data
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Refinement
|
Data collection: APEX2 (Bruker, 2003); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810018003/pv2278sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810018003/pv2278Isup2.hkl
All reagents were of analytical grade. The title compound was prepared according to literature methods (Srivastava et al., 2002; Johnson et al., 1983). It was characterized by recording its infrared spectra and elemental analyses. Single crystals of the title compound were obtained by slow evaporation of its chloroform solution at room temperature.
All H atoms bonded to C atoms were calculated in idealized position with C—H = 0.93-0.98 Å and refined in riding mode on their parent atoms with Uiso(H) values of 1.2Ueq(C).
As a part of our programme studying the new applications of cyclic sulfoxide derivatives in medicne (Wang, et al., 2009; Xu, et al., 2009), we report herein the
of the title compounds.The molecular structure of the title compound is shown in Fig. 1. The thiazolidin-4-one ring adopts an
with S lying 0.631 (4) Å out of the plane formed by the rest of the ring atoms; the phenyl ring is oriented at right angles (88.74 (8)°) with respect to the ring (C2/C3/N1/C1) atoms. The butyl chain is in a fully extended conformation. The crystal packing (Fig. 2) consists of a two-dimensional network in the a-c-plane generated by intermolecular interactions of the weak C—H···O hydrogen bonds.For related structures, see: Wang et al. (2009); Xu et al. (2009). For synthetic procedures, see: Johnson et al. (1983); Srivastava et al. (2002);
Data collection: APEX2 (Bruker, 2003); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H17NO2S | F(000) = 536 |
Mr = 251.34 | Dx = 1.227 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5947 reflections |
a = 13.8335 (5) Å | θ = 2.8–25.9° |
b = 8.7461 (3) Å | µ = 0.23 mm−1 |
c = 12.3853 (4) Å | T = 297 K |
β = 114.773 (2)° | Block, yellow |
V = 1360.59 (8) Å3 | 0.28 × 0.26 × 0.20 mm |
Z = 4 |
Bruker APEXII CCD area-detector diffractometer | 3118 independent reflections |
Radiation source: fine-focus sealed tube | 2169 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
φ and ω scans | θmax = 27.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | h = −17→12 |
Tmin = 0.939, Tmax = 0.956 | k = −11→11 |
15990 measured reflections | l = −15→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0833P)2 + 0.1042P] where P = (Fo2 + 2Fc2)/3 |
3118 reflections | (Δ/σ)max < 0.001 |
155 parameters | Δρmax = 0.34 e Å−3 |
6 restraints | Δρmin = −0.29 e Å−3 |
C13H17NO2S | V = 1360.59 (8) Å3 |
Mr = 251.34 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.8335 (5) Å | µ = 0.23 mm−1 |
b = 8.7461 (3) Å | T = 297 K |
c = 12.3853 (4) Å | 0.28 × 0.26 × 0.20 mm |
β = 114.773 (2)° |
Bruker APEXII CCD area-detector diffractometer | 3118 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | 2169 reflections with I > 2σ(I) |
Tmin = 0.939, Tmax = 0.956 | Rint = 0.030 |
15990 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 6 restraints |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 1.14 | Δρmax = 0.34 e Å−3 |
3118 reflections | Δρmin = −0.29 e Å−3 |
155 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R– factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.25227 (13) | 0.66161 (18) | 0.36775 (14) | 0.0437 (4) | |
O1 | 0.04410 (14) | 0.84045 (17) | 0.19284 (19) | 0.0788 (6) | |
O2 | 0.24851 (16) | 0.7278 (2) | 0.54296 (16) | 0.0820 (6) | |
S1 | 0.04960 (4) | 0.67497 (6) | 0.22013 (5) | 0.0522 (2) | |
C1 | 0.20313 (18) | 0.6887 (2) | 0.4393 (2) | 0.0514 (5) | |
C2 | 0.08545 (18) | 0.6614 (2) | 0.3755 (2) | 0.0553 (6) | |
H2A | 0.0469 | 0.7371 | 0.3993 | 0.066* | |
H2B | 0.0678 | 0.5608 | 0.3949 | 0.066* | |
C3 | 0.18626 (14) | 0.6127 (2) | 0.24789 (16) | 0.0410 (5) | |
H3 | 0.2085 | 0.6679 | 0.1933 | 0.049* | |
C4 | 0.18891 (14) | 0.4445 (2) | 0.22558 (16) | 0.0393 (4) | |
C5 | 0.15706 (17) | 0.3929 (2) | 0.10953 (19) | 0.0525 (5) | |
H5 | 0.1360 | 0.4631 | 0.0474 | 0.063* | |
C6 | 0.1564 (2) | 0.2395 (3) | 0.0856 (2) | 0.0650 (7) | |
H6 | 0.1346 | 0.2067 | 0.0075 | 0.078* | |
C7 | 0.1875 (2) | 0.1350 (3) | 0.1756 (3) | 0.0692 (7) | |
H7 | 0.1875 | 0.0313 | 0.1589 | 0.083* | |
C8 | 0.2186 (2) | 0.1831 (3) | 0.2906 (3) | 0.0677 (7) | |
H8 | 0.2387 | 0.1118 | 0.3518 | 0.081* | |
C9 | 0.22036 (17) | 0.3375 (2) | 0.3161 (2) | 0.0531 (6) | |
H9 | 0.2428 | 0.3694 | 0.3945 | 0.064* | |
C10 | 0.36729 (17) | 0.6710 (3) | 0.4092 (2) | 0.0577 (6) | |
H10A | 0.3932 | 0.5761 | 0.3906 | 0.069* | |
H10B | 0.3996 | 0.6830 | 0.4949 | 0.069* | |
C11 | 0.4012 (2) | 0.8007 (3) | 0.3546 (3) | 0.0734 (7) | |
H11A | 0.3744 | 0.8954 | 0.3726 | 0.088* | |
H11B | 0.3689 | 0.7882 | 0.2689 | 0.088* | |
C12 | 0.5200 (2) | 0.8135 (4) | 0.3968 (3) | 0.1025 (11) | |
H12A | 0.5521 | 0.8311 | 0.4820 | 0.123* | |
H12B | 0.5473 | 0.7173 | 0.3821 | 0.123* | |
C13 | 0.5527 (3) | 0.9381 (6) | 0.3380 (4) | 0.1532 (17) | |
H13A | 0.5328 | 0.9122 | 0.2561 | 0.184* | |
H13B | 0.6284 | 0.9516 | 0.3773 | 0.184* | |
H13C | 0.5179 | 1.0314 | 0.3425 | 0.184* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0431 (9) | 0.0507 (10) | 0.0389 (9) | −0.0063 (7) | 0.0189 (7) | −0.0076 (7) |
O1 | 0.0751 (12) | 0.0415 (10) | 0.1114 (15) | 0.0132 (7) | 0.0307 (11) | 0.0173 (9) |
O2 | 0.0877 (14) | 0.1101 (16) | 0.0556 (11) | −0.0193 (11) | 0.0372 (10) | −0.0332 (10) |
S1 | 0.0453 (3) | 0.0400 (3) | 0.0641 (4) | 0.0035 (2) | 0.0156 (3) | 0.0018 (2) |
C1 | 0.0614 (14) | 0.0500 (12) | 0.0506 (14) | −0.0080 (10) | 0.0312 (11) | −0.0118 (10) |
C2 | 0.0566 (13) | 0.0484 (12) | 0.0733 (16) | −0.0076 (9) | 0.0395 (12) | −0.0104 (10) |
C3 | 0.0437 (10) | 0.0447 (10) | 0.0367 (11) | −0.0019 (8) | 0.0190 (9) | 0.0008 (8) |
C4 | 0.0381 (10) | 0.0426 (10) | 0.0403 (11) | 0.0019 (8) | 0.0195 (8) | −0.0010 (8) |
C5 | 0.0572 (13) | 0.0567 (13) | 0.0464 (13) | 0.0022 (10) | 0.0243 (10) | −0.0042 (10) |
C6 | 0.0661 (16) | 0.0669 (16) | 0.0636 (16) | −0.0004 (12) | 0.0288 (13) | −0.0227 (13) |
C7 | 0.0654 (15) | 0.0489 (13) | 0.094 (2) | 0.0026 (11) | 0.0339 (15) | −0.0165 (14) |
C8 | 0.0723 (17) | 0.0492 (14) | 0.083 (2) | 0.0130 (11) | 0.0336 (14) | 0.0151 (12) |
C9 | 0.0617 (14) | 0.0517 (12) | 0.0472 (13) | 0.0068 (10) | 0.0241 (11) | 0.0037 (9) |
C10 | 0.0464 (12) | 0.0706 (15) | 0.0527 (14) | −0.0020 (10) | 0.0174 (10) | −0.0063 (11) |
C11 | 0.0514 (15) | 0.0891 (18) | 0.0734 (18) | −0.0103 (13) | 0.0200 (13) | 0.0048 (14) |
C12 | 0.0567 (17) | 0.137 (3) | 0.113 (3) | −0.0209 (17) | 0.0347 (18) | −0.005 (2) |
C13 | 0.127 (2) | 0.179 (3) | 0.168 (3) | −0.041 (2) | 0.076 (2) | 0.009 (2) |
N1—C1 | 1.345 (2) | C7—C8 | 1.370 (4) |
N1—C3 | 1.444 (2) | C7—H7 | 0.9300 |
N1—C10 | 1.455 (3) | C8—C9 | 1.385 (3) |
O1—S1 | 1.4809 (16) | C8—H8 | 0.9300 |
O2—C1 | 1.218 (3) | C9—H9 | 0.9300 |
S1—C2 | 1.779 (2) | C10—C11 | 1.493 (3) |
S1—C3 | 1.8559 (18) | C10—H10A | 0.9700 |
C1—C2 | 1.501 (3) | C10—H10B | 0.9700 |
C2—H2A | 0.9700 | C11—C12 | 1.507 (4) |
C2—H2B | 0.9700 | C11—H11A | 0.9700 |
C3—C4 | 1.500 (3) | C11—H11B | 0.9700 |
C3—H3 | 0.9800 | C12—C13 | 1.482 (5) |
C4—C9 | 1.383 (3) | C12—H12A | 0.9700 |
C4—C5 | 1.390 (3) | C12—H12B | 0.9700 |
C5—C6 | 1.374 (3) | C13—H13A | 0.9600 |
C5—H5 | 0.9300 | C13—H13B | 0.9600 |
C6—C7 | 1.364 (4) | C13—H13C | 0.9600 |
C6—H6 | 0.9300 | ||
C1—N1—C3 | 116.95 (17) | C8—C7—H7 | 120.1 |
C1—N1—C10 | 122.52 (18) | C7—C8—C9 | 120.3 (2) |
C3—N1—C10 | 120.42 (15) | C7—C8—H8 | 119.8 |
O1—S1—C2 | 106.05 (11) | C9—C8—H8 | 119.8 |
O1—S1—C3 | 106.27 (10) | C8—C9—C4 | 120.3 (2) |
C2—S1—C3 | 88.82 (9) | C8—C9—H9 | 119.8 |
O2—C1—N1 | 124.4 (2) | C4—C9—H9 | 119.8 |
O2—C1—C2 | 124.46 (19) | N1—C10—C11 | 112.81 (18) |
N1—C1—C2 | 111.17 (19) | N1—C10—H10A | 109.0 |
C1—C2—S1 | 107.95 (14) | C11—C10—H10A | 109.0 |
C1—C2—H2A | 110.1 | N1—C10—H10B | 109.0 |
S1—C2—H2A | 110.1 | C11—C10—H10B | 109.0 |
C1—C2—H2B | 110.1 | H10A—C10—H10B | 107.8 |
S1—C2—H2B | 110.1 | C10—C11—C12 | 113.8 (2) |
H2A—C2—H2B | 108.4 | C10—C11—H11A | 108.8 |
N1—C3—C4 | 115.24 (16) | C12—C11—H11A | 108.8 |
N1—C3—S1 | 105.05 (12) | C10—C11—H11B | 108.8 |
C4—C3—S1 | 110.82 (12) | C12—C11—H11B | 108.8 |
N1—C3—H3 | 108.5 | H11A—C11—H11B | 107.7 |
C4—C3—H3 | 108.5 | C13—C12—C11 | 113.4 (3) |
S1—C3—H3 | 108.5 | C13—C12—H12A | 108.9 |
C9—C4—C5 | 118.34 (19) | C11—C12—H12A | 108.9 |
C9—C4—C3 | 122.52 (18) | C13—C12—H12B | 108.9 |
C5—C4—C3 | 119.13 (17) | C11—C12—H12B | 108.9 |
C6—C5—C4 | 120.7 (2) | H12A—C12—H12B | 107.7 |
C6—C5—H5 | 119.6 | C12—C13—H13A | 109.5 |
C4—C5—H5 | 119.6 | C12—C13—H13B | 109.5 |
C7—C6—C5 | 120.5 (2) | H13A—C13—H13B | 109.5 |
C7—C6—H6 | 119.8 | C12—C13—H13C | 109.5 |
C5—C6—H6 | 119.8 | H13A—C13—H13C | 109.5 |
C6—C7—C8 | 119.8 (2) | H13B—C13—H13C | 109.5 |
C6—C7—H7 | 120.1 | ||
C3—N1—C1—O2 | 178.6 (2) | N1—C3—C4—C9 | 21.3 (3) |
C10—N1—C1—O2 | 2.4 (3) | S1—C3—C4—C9 | −97.9 (2) |
C3—N1—C1—C2 | −0.3 (2) | N1—C3—C4—C5 | −159.80 (16) |
C10—N1—C1—C2 | −176.47 (18) | S1—C3—C4—C5 | 81.10 (18) |
O2—C1—C2—S1 | 159.4 (2) | C9—C4—C5—C6 | 0.3 (3) |
N1—C1—C2—S1 | −21.8 (2) | C3—C4—C5—C6 | −178.67 (18) |
O1—S1—C2—C1 | −78.65 (16) | C4—C5—C6—C7 | −0.2 (3) |
C3—S1—C2—C1 | 27.94 (15) | C5—C6—C7—C8 | 0.6 (4) |
C1—N1—C3—C4 | −101.4 (2) | C6—C7—C8—C9 | −1.0 (4) |
C10—N1—C3—C4 | 74.9 (2) | C7—C8—C9—C4 | 1.1 (3) |
C1—N1—C3—S1 | 20.9 (2) | C5—C4—C9—C8 | −0.7 (3) |
C10—N1—C3—S1 | −162.82 (15) | C3—C4—C9—C8 | 178.21 (18) |
O1—S1—C3—N1 | 78.93 (14) | C1—N1—C10—C11 | −112.5 (2) |
C2—S1—C3—N1 | −27.45 (13) | C3—N1—C10—C11 | 71.4 (2) |
O1—S1—C3—C4 | −155.99 (14) | N1—C10—C11—C12 | 179.6 (2) |
C2—S1—C3—C4 | 97.63 (14) | C10—C11—C12—C13 | 177.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2B···O1i | 0.97 | 2.43 | 3.246 (3) | 142 |
C3—H3···O2ii | 0.98 | 2.34 | 3.311 (3) | 172 |
C9—H9···N1 | 0.93 | 2.59 | 2.899 (2) | 100 |
C10—H10B···O2 | 0.97 | 2.43 | 2.824 (3) | 104 |
C11—H11B···O2ii | 0.97 | 2.59 | 3.548 (4) | 169 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H17NO2S |
Mr | 251.34 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 297 |
a, b, c (Å) | 13.8335 (5), 8.7461 (3), 12.3853 (4) |
β (°) | 114.773 (2) |
V (Å3) | 1360.59 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.28 × 0.26 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1997) |
Tmin, Tmax | 0.939, 0.956 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15990, 3118, 2169 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.159, 1.14 |
No. of reflections | 3118 |
No. of parameters | 155 |
No. of restraints | 6 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.29 |
Computer programs: APEX2 (Bruker, 2003), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2B···O1i | 0.97 | 2.43 | 3.246 (3) | 142 |
C3—H3···O2ii | 0.98 | 2.34 | 3.311 (3) | 172 |
C11—H11B···O2ii | 0.97 | 2.59 | 3.548 (4) | 169 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) x, −y+3/2, z−1/2. |
Acknowledgements
This work was supported by the Foundation of Henan Polytechnic University for Doctor Teachers (B2010-65), and the authors thank Dr L. Yang, Dr D. Zhao and Dr Z. Z. Zhang for their support of the data collection and analysis.
References
Bruker (2001). SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2003). APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Johnson, M. R., Dong, M., Fazio, M. J., Ward, D. L. & Sousa, L. R. (1983). J. Org. Chem. 48, 494–499. CSD CrossRef CAS Web of Science Google Scholar
Sheldrick, G. M. (1997). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Srivastava, T., Haq, W. & Katti, S. B. (2002). Tetrahedron, 58, 7619–7624. Web of Science CrossRef CAS Google Scholar
Wang, Q., Yang, L., Xu, Z. & Sun, Y. (2009). Acta Cryst. E65, o1978. Web of Science CSD CrossRef IUCr Journals Google Scholar
Xu, Z., Sun, Y., Yang, L. & Wang, Q. (2009). Acta Cryst. E65, o1799. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our programme studying the new applications of cyclic sulfoxide derivatives in medicne (Wang, et al., 2009; Xu, et al., 2009), we report herein the crystal structure of the title compounds.
The molecular structure of the title compound is shown in Fig. 1. The thiazolidin-4-one ring adopts an envelope conformation with S lying 0.631 (4) Å out of the plane formed by the rest of the ring atoms; the phenyl ring is oriented at right angles (88.74 (8)°) with respect to the ring (C2/C3/N1/C1) atoms. The butyl chain is in a fully extended conformation. The crystal packing (Fig. 2) consists of a two-dimensional network in the a-c-plane generated by intermolecular interactions of the weak C—H···O hydrogen bonds.