organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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ISSN: 2056-9890

14-Hy­dr­oxy-8,14-secogammacera-7-ene-3,21-dione from the bark of Lansium domesticum Corr.

aDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Padjadjaran University, Jatinangor 45363, Indonesia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my

(Received 2 June 2010; accepted 3 June 2010; online 9 June 2010)

In the title compound (kokosanolide B), C30H48O3, the hexa­hydro- and octa­hydro­naphthalen-2-one ring systems are connected through an ethyl­ene fragment, with a C—CH2—CH2—C torsion angle of 176.2 (2)°. The cyclo­hexene ring adopts a half-chair conformation, while the other six-membered rings adopt distorted chair conformations. In the crystal, adjacent mol­ecules are linked into a zigzag chain along the b axis by O—H⋯O hydrogen bonds involving the hy­droxy and carbonyl groups.

Related literature

For a related compound from the same species, see: Tjokronegero et al. (2009[Tjokronegero, R., Mayanti, T., Supratman, U., Mukhtar, M. R. & Ng, S. W. (2009). Acta Cryst. E65, o1448.]). For kokosanolide A, see: Mayanti et al. (2009[Mayanti, T., Supratman, U., Mukhtar, M. R., Awang, K. & Ng, S. W. (2009). Acta Cryst. E65, o750.]).

[Scheme 1]

Experimental

Crystal data
  • C30H48O3

  • Mr = 456.68

  • Orthorhombic, P 21 21 21

  • a = 11.8841 (11) Å

  • b = 14.8301 (13) Å

  • c = 15.2755 (13) Å

  • V = 2692.2 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 100 K

  • 0.20 × 0.10 × 0.05 mm

Data collection
  • Bruker SMART APEXII diffractometer

  • 26171 measured reflections

  • 3469 independent reflections

  • 3033 reflections with I > 2σ(I)

  • Rint = 0.067

Refinement
  • R[F2 > 2σ(F2)] = 0.039

  • wR(F2) = 0.098

  • S = 1.01

  • 3469 reflections

  • 310 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.20 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯O3i 0.84 (1) 2.15 (1) 2.974 (2) 167 (3)
Symmetry code: (i) [-x+2, y+{\script{1\over 2}}, -z+{\script{3\over 2}}].

Data collection: APEX2 (Bruker, 2009[Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2009[Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: X-SEED (Barbour, 2001[Barbour, L. J. (2001). J. Supramol. Chem. 1, 189-191.]); software used to prepare material for publication: publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43. Submitted.]).

Supporting information


Comment top

A previous study on the bark of Lansium domesticum Corr (Meliaceae) yielded a co-crystal, 8,14-secogammacera-7,14 (27)-diene–3,21-dione-8,14-secogammacera-7,14-diene-3,21-dione (1.5/0.5). The major component has an excocyclic double bond and an endocyclic double bond (Tjokronegero et al., 2009). In the present compound (Scheme I), a molecule of water has been added across the endocyclic double bond to furnish the corresponding alcohol (Fig. 1).

The hexahydro-naphthalen-2-one and octahydro-naphthalen-2-one ring systems are connected through an ethylene fragment, with a C–CH2–CH2–C torsion angle of 176.2 (2)°. The hydroxy unit of one fused-ring forms a hydrogen bond to the ketonic unit of the other fused-ring of an adjacent molecule to generate a zigzag chain.

Related literature top

For a related compound from the same species, see: Tjokronegero et al. (2009). For kokosanolide A, see: Mayanti et al. (2009).

Experimental top

Lansium domesticum Corr. (Meliaceae) was collected in Cililin, Bandung, Indonesia, in 2006. The plant was identified by the staff at Department of Biology, Padjadjaran University. The dried and milled bark of L. domesticum (3 kg) was extracted exhaustively by methanol at room temperature. The methanol extract (250 g) was partitioned between n-hexane and ethyl acetate to give an n-hexane soluble fraction (70 g) and an ethyl acetate soluble fraction (40 g). The ethyl acetate fraction was subjected to vacuum column chromatography on silica gel 60 by using a step gradient of n-hexane/ethyl acetate/methanol. The fraction eluted by n-hexane/ethyl acetate (80:20) was further separated by column chromatography on silica gel n-hexane/ethyl acetate (95:5) and n-hexane/acetone (90:10). Single crystals were obtained by slow evaporation of the solvent.

Refinement top

Carbon-bound H-atoms were placed in calculated positions [C—H = 0.95–1.00 Å] and were included in the refinement in the riding-model approximation, with Uiso(H) = 1.2–1.5U(C). The hydroxy H-atom was located in a difference Fourier map and was refined with a distance restraint of O–H = 0.84 (1) Å; its Uiso parameter was freely refined. 2721 Friedel pairs were merged

Computing details top

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Figures top
[Figure 1] Fig. 1. Displacement ellipsoid plot (Barbour, 2001) of C30H48O3 at the 70% probability level. H atoms are drawn as spheres of arbitrary radius.
14-Hydroxy-8,14-secogammacera-7-ene-3,21-dione top
Crystal data top
C30H48O3F(000) = 1008
Mr = 456.68Dx = 1.127 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3379 reflections
a = 11.8841 (11) Åθ = 2.6–20.6°
b = 14.8301 (13) ŵ = 0.07 mm1
c = 15.2755 (13) ÅT = 100 K
V = 2692.2 (4) Å3Plate, colourless
Z = 40.20 × 0.10 × 0.05 mm
Data collection top
Bruker SMART APEXII
diffractometer
3033 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.067
Graphite monochromatorθmax = 27.5°, θmin = 1.9°
ω scansh = 1515
26171 measured reflectionsk = 1719
3469 independent reflectionsl = 1919
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 1.01 w = 1/[σ2(Fo2) + (0.0534P)2 + 0.4471P]
where P = (Fo2 + 2Fc2)/3
3469 reflections(Δ/σ)max = 0.001
310 parametersΔρmax = 0.25 e Å3
1 restraintΔρmin = 0.20 e Å3
Crystal data top
C30H48O3V = 2692.2 (4) Å3
Mr = 456.68Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 11.8841 (11) ŵ = 0.07 mm1
b = 14.8301 (13) ÅT = 100 K
c = 15.2755 (13) Å0.20 × 0.10 × 0.05 mm
Data collection top
Bruker SMART APEXII
diffractometer
3033 reflections with I > 2σ(I)
26171 measured reflectionsRint = 0.067
3469 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0391 restraint
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 1.01Δρmax = 0.25 e Å3
3469 reflectionsΔρmin = 0.20 e Å3
310 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.85660 (14)0.46079 (11)1.07799 (11)0.0313 (4)
O20.92757 (12)0.95328 (10)1.00483 (10)0.0193 (3)
H20.956 (2)0.9990 (13)1.0283 (17)0.044 (9)*
O30.97661 (13)0.62965 (10)0.44013 (10)0.0230 (3)
C11.00012 (16)0.70418 (13)0.99742 (13)0.0139 (4)
C20.94385 (17)0.63545 (13)0.93607 (13)0.0171 (4)
H2A0.86270.64970.93150.021*
H2B0.97700.64140.87690.021*
C30.95721 (19)0.53755 (14)0.96705 (14)0.0205 (5)
H3A0.91410.49740.92760.025*
H3B1.03750.52020.96320.025*
C40.91696 (17)0.52388 (14)1.05964 (15)0.0190 (4)
C50.95844 (18)0.59017 (14)1.12907 (14)0.0188 (4)
C60.95358 (17)0.68799 (13)1.09158 (13)0.0155 (4)
H60.87140.70171.08700.019*
C71.07759 (19)0.55946 (15)1.15649 (15)0.0234 (5)
H7A1.07350.49901.18220.035*
H7B1.10810.60171.19970.035*
H7C1.12670.55821.10490.035*
C80.8817 (2)0.58287 (17)1.20997 (15)0.0296 (5)
H8A0.87240.51931.22590.044*
H8B0.80800.60911.19650.044*
H8C0.91580.61561.25900.044*
C91.12928 (17)0.69324 (14)0.98960 (14)0.0185 (4)
H9A1.14780.62930.98200.028*
H9B1.16530.71601.04290.028*
H9C1.15650.72750.93900.028*
C100.99922 (19)0.75933 (14)1.15478 (13)0.0199 (4)
H10A0.97210.74651.21480.024*
H10B1.08250.75711.15530.024*
C110.96049 (19)0.85294 (14)1.12704 (14)0.0204 (4)
H11A0.99250.89801.16790.025*
H11B0.87750.85611.13180.025*
C120.99487 (18)0.87777 (13)1.03345 (13)0.0162 (4)
C130.96039 (16)0.80090 (13)0.97016 (12)0.0133 (4)
H130.87650.79830.97490.016*
C141.11914 (18)0.90456 (14)1.03022 (15)0.0212 (5)
H14A1.14280.91100.96910.032*
H14B1.16450.85781.05870.032*
H14C1.12960.96201.06080.032*
C150.98231 (16)0.82616 (14)0.87297 (13)0.0160 (4)
H15A1.00860.88940.86980.019*
H15B1.04280.78720.84950.019*
C160.87697 (17)0.81557 (14)0.81600 (13)0.0159 (4)
H16A0.81520.85110.84250.019*
H16B0.85390.75140.81660.019*
C170.89186 (16)0.84596 (14)0.71915 (12)0.0152 (4)
H170.97470.85200.70920.018*
C180.84100 (17)0.93890 (14)0.70231 (13)0.0168 (4)
C190.78520 (18)0.95775 (14)0.62919 (14)0.0184 (4)
H190.75111.01550.62450.022*
C200.77245 (18)0.89399 (14)0.55361 (13)0.0178 (4)
H20A0.78460.92700.49810.021*
H20B0.69500.86940.55300.021*
C210.85675 (16)0.81635 (13)0.56021 (13)0.0138 (4)
H210.93250.84560.55790.017*
C220.84927 (16)0.77380 (13)0.65296 (13)0.0133 (4)
C230.8624 (2)1.01122 (15)0.76957 (15)0.0237 (5)
H23A0.82261.06640.75270.036*
H23B0.94341.02340.77290.036*
H23C0.83530.99090.82680.036*
C240.72842 (17)0.74445 (14)0.67586 (13)0.0165 (4)
H24A0.72860.71260.73210.025*
H24B0.69980.70430.63000.025*
H24C0.68010.79780.68010.025*
C250.92925 (17)0.69270 (14)0.65756 (13)0.0171 (4)
H25A1.00770.71430.65210.021*
H25B0.92140.66350.71550.021*
C260.90659 (19)0.62292 (14)0.58610 (13)0.0194 (4)
H26A0.96020.57220.59220.023*
H26B0.82950.59870.59290.023*
C270.91895 (17)0.66457 (14)0.49686 (13)0.0166 (4)
C280.85347 (18)0.75171 (14)0.47911 (12)0.0163 (4)
C290.73416 (19)0.72086 (16)0.45128 (14)0.0226 (5)
H29A0.73910.68590.39700.034*
H29B0.68650.77390.44180.034*
H29C0.70140.68330.49750.034*
C300.9062 (2)0.80059 (15)0.40058 (14)0.0240 (5)
H30A0.90830.75980.35010.036*
H30B0.98300.81930.41540.036*
H30C0.86110.85380.38610.036*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0368 (9)0.0232 (9)0.0339 (10)0.0136 (8)0.0019 (8)0.0039 (7)
O20.0229 (8)0.0134 (7)0.0215 (8)0.0024 (6)0.0014 (6)0.0003 (6)
O30.0264 (8)0.0221 (8)0.0205 (8)0.0031 (7)0.0032 (7)0.0024 (7)
C10.0152 (9)0.0139 (10)0.0125 (9)0.0004 (8)0.0005 (8)0.0016 (8)
C20.0207 (9)0.0159 (10)0.0148 (10)0.0006 (8)0.0008 (8)0.0018 (8)
C30.0266 (11)0.0153 (10)0.0195 (10)0.0006 (9)0.0009 (9)0.0049 (8)
C40.0173 (9)0.0163 (10)0.0234 (11)0.0010 (8)0.0042 (9)0.0012 (9)
C50.0233 (11)0.0160 (10)0.0171 (10)0.0011 (8)0.0001 (9)0.0032 (8)
C60.0175 (9)0.0147 (9)0.0142 (9)0.0007 (8)0.0008 (8)0.0004 (8)
C70.0302 (11)0.0168 (10)0.0232 (11)0.0001 (10)0.0095 (10)0.0006 (9)
C80.0416 (14)0.0241 (12)0.0230 (12)0.0026 (11)0.0101 (11)0.0047 (10)
C90.0168 (9)0.0185 (10)0.0203 (10)0.0013 (8)0.0009 (8)0.0004 (9)
C100.0282 (11)0.0168 (10)0.0146 (10)0.0029 (9)0.0019 (9)0.0017 (8)
C110.0296 (11)0.0157 (10)0.0160 (10)0.0018 (9)0.0005 (9)0.0032 (8)
C120.0198 (10)0.0129 (10)0.0159 (10)0.0022 (8)0.0011 (8)0.0004 (8)
C130.0138 (9)0.0137 (10)0.0124 (9)0.0008 (8)0.0008 (7)0.0006 (8)
C140.0209 (10)0.0169 (10)0.0257 (11)0.0029 (8)0.0066 (9)0.0010 (9)
C150.0152 (9)0.0181 (10)0.0146 (10)0.0016 (8)0.0006 (8)0.0010 (8)
C160.0172 (9)0.0155 (10)0.0149 (9)0.0016 (8)0.0004 (8)0.0004 (8)
C170.0159 (9)0.0158 (10)0.0139 (9)0.0008 (8)0.0003 (8)0.0015 (8)
C180.0189 (9)0.0133 (10)0.0182 (10)0.0013 (8)0.0041 (8)0.0009 (8)
C190.0211 (10)0.0134 (10)0.0208 (11)0.0027 (8)0.0032 (8)0.0002 (8)
C200.0224 (10)0.0163 (10)0.0146 (10)0.0029 (8)0.0013 (8)0.0003 (8)
C210.0151 (9)0.0136 (10)0.0128 (9)0.0013 (8)0.0005 (8)0.0002 (8)
C220.0135 (9)0.0124 (9)0.0140 (9)0.0002 (7)0.0005 (8)0.0003 (8)
C230.0336 (12)0.0156 (11)0.0220 (11)0.0013 (9)0.0010 (10)0.0029 (9)
C240.0182 (9)0.0184 (10)0.0129 (9)0.0033 (8)0.0015 (8)0.0001 (8)
C250.0198 (10)0.0181 (10)0.0134 (9)0.0022 (8)0.0005 (8)0.0009 (8)
C260.0264 (11)0.0133 (10)0.0187 (11)0.0031 (9)0.0011 (9)0.0011 (8)
C270.0182 (9)0.0150 (10)0.0166 (10)0.0030 (8)0.0001 (8)0.0031 (8)
C280.0198 (10)0.0161 (10)0.0130 (10)0.0006 (8)0.0009 (8)0.0001 (8)
C290.0249 (11)0.0232 (11)0.0195 (11)0.0003 (9)0.0051 (9)0.0027 (9)
C300.0366 (12)0.0191 (11)0.0164 (10)0.0002 (10)0.0065 (9)0.0010 (9)
Geometric parameters (Å, º) top
O1—C41.212 (3)C15—C161.533 (3)
O2—C121.444 (2)C15—H15A0.99
O2—H20.841 (10)C15—H15B0.99
O3—C271.220 (2)C16—C171.557 (3)
C1—C21.538 (3)C16—H16A0.99
C1—C91.548 (3)C16—H16B0.99
C1—C61.560 (3)C17—C181.527 (3)
C1—C131.566 (3)C17—C221.557 (3)
C2—C31.535 (3)C17—H171.00
C2—H2A0.99C18—C191.329 (3)
C2—H2B0.99C18—C231.507 (3)
C3—C41.507 (3)C19—C201.500 (3)
C3—H3A0.99C19—H190.95
C3—H3B0.99C20—C211.530 (3)
C4—C51.528 (3)C20—H20A0.99
C5—C81.540 (3)C20—H20B0.99
C5—C71.545 (3)C21—C221.553 (3)
C5—C61.561 (3)C21—C281.567 (3)
C6—C101.531 (3)C21—H211.00
C6—H61.00C22—C251.535 (3)
C7—H7A0.98C22—C241.541 (3)
C7—H7B0.98C23—H23A0.98
C7—H7C0.98C23—H23B0.98
C8—H8A0.98C23—H23C0.98
C8—H8B0.98C24—H24A0.98
C8—H8C0.98C24—H24B0.98
C9—H9A0.98C24—H24C0.98
C9—H9B0.98C25—C261.528 (3)
C9—H9C0.98C25—H25A0.99
C10—C111.523 (3)C25—H25B0.99
C10—H10A0.99C26—C271.504 (3)
C10—H10B0.99C26—H26A0.99
C11—C121.532 (3)C26—H26B0.99
C11—H11A0.99C27—C281.533 (3)
C11—H11B0.99C28—C301.535 (3)
C12—C141.530 (3)C28—C291.549 (3)
C12—C131.550 (3)C29—H29A0.98
C13—C151.553 (3)C29—H29B0.98
C13—H131.00C29—H29C0.98
C14—H14A0.98C30—H30A0.98
C14—H14B0.98C30—H30B0.98
C14—H14C0.98C30—H30C0.98
C12—O2—H2106 (2)C16—C15—H15B109.1
C2—C1—C9108.35 (16)C13—C15—H15B109.1
C2—C1—C6107.81 (16)H15A—C15—H15B107.9
C9—C1—C6113.99 (17)C15—C16—C17114.65 (16)
C2—C1—C13108.29 (16)C15—C16—H16A108.6
C9—C1—C13111.98 (16)C17—C16—H16A108.6
C6—C1—C13106.21 (15)C15—C16—H16B108.6
C3—C2—C1113.21 (17)C17—C16—H16B108.6
C3—C2—H2A108.9H16A—C16—H16B107.6
C1—C2—H2A108.9C18—C17—C22112.49 (16)
C3—C2—H2B108.9C18—C17—C16112.11 (16)
C1—C2—H2B108.9C22—C17—C16112.41 (16)
H2A—C2—H2B107.8C18—C17—H17106.4
C4—C3—C2112.56 (18)C22—C17—H17106.4
C4—C3—H3A109.1C16—C17—H17106.4
C2—C3—H3A109.1C19—C18—C23120.51 (19)
C4—C3—H3B109.1C19—C18—C17121.94 (19)
C2—C3—H3B109.1C23—C18—C17117.44 (18)
H3A—C3—H3B107.8C18—C19—C20124.39 (19)
O1—C4—C3120.6 (2)C18—C19—H19117.8
O1—C4—C5121.8 (2)C20—C19—H19117.8
C3—C4—C5117.56 (18)C19—C20—C21110.95 (17)
C4—C5—C8108.71 (18)C19—C20—H20A109.4
C4—C5—C7107.11 (17)C21—C20—H20A109.4
C8—C5—C7107.74 (18)C19—C20—H20B109.4
C4—C5—C6109.35 (17)C21—C20—H20B109.4
C8—C5—C6109.75 (18)H20A—C20—H20B108.0
C7—C5—C6114.03 (18)C20—C21—C22109.17 (16)
C10—C6—C1110.45 (16)C20—C21—C28113.08 (16)
C10—C6—C5113.44 (17)C22—C21—C28118.11 (16)
C1—C6—C5117.93 (17)C20—C21—H21105.1
C10—C6—H6104.5C22—C21—H21105.1
C1—C6—H6104.5C28—C21—H21105.1
C5—C6—H6104.5C25—C22—C24110.21 (16)
C5—C7—H7A109.5C25—C22—C21108.94 (16)
C5—C7—H7B109.5C24—C22—C21112.03 (16)
H7A—C7—H7B109.5C25—C22—C17107.92 (16)
C5—C7—H7C109.5C24—C22—C17110.47 (16)
H7A—C7—H7C109.5C21—C22—C17107.13 (15)
H7B—C7—H7C109.5C18—C23—H23A109.5
C5—C8—H8A109.5C18—C23—H23B109.5
C5—C8—H8B109.5H23A—C23—H23B109.5
H8A—C8—H8B109.5C18—C23—H23C109.5
C5—C8—H8C109.5H23A—C23—H23C109.5
H8A—C8—H8C109.5H23B—C23—H23C109.5
H8B—C8—H8C109.5C22—C24—H24A109.5
C1—C9—H9A109.5C22—C24—H24B109.5
C1—C9—H9B109.5H24A—C24—H24B109.5
H9A—C9—H9B109.5C22—C24—H24C109.5
C1—C9—H9C109.5H24A—C24—H24C109.5
H9A—C9—H9C109.5H24B—C24—H24C109.5
H9B—C9—H9C109.5C26—C25—C22112.89 (16)
C11—C10—C6110.33 (17)C26—C25—H25A109.0
C11—C10—H10A109.6C22—C25—H25A109.0
C6—C10—H10A109.6C26—C25—H25B109.0
C11—C10—H10B109.6C22—C25—H25B109.0
C6—C10—H10B109.6H25A—C25—H25B107.8
H10A—C10—H10B108.1C27—C26—C25110.62 (16)
C10—C11—C12113.46 (17)C27—C26—H26A109.5
C10—C11—H11A108.9C25—C26—H26A109.5
C12—C11—H11A108.9C27—C26—H26B109.5
C10—C11—H11B108.9C25—C26—H26B109.5
C12—C11—H11B108.9H26A—C26—H26B108.1
H11A—C11—H11B107.7O3—C27—C26121.62 (19)
O2—C12—C14108.86 (16)O3—C27—C28121.16 (18)
O2—C12—C11108.74 (17)C26—C27—C28117.20 (17)
C14—C12—C11110.49 (18)C27—C28—C30109.20 (17)
O2—C12—C13103.60 (15)C27—C28—C29105.32 (17)
C14—C12—C13115.21 (17)C30—C28—C29107.38 (17)
C11—C12—C13109.57 (16)C27—C28—C21111.30 (16)
C12—C13—C15112.00 (16)C30—C28—C21108.59 (16)
C12—C13—C1115.34 (16)C29—C28—C21114.86 (17)
C15—C13—C1115.11 (16)C28—C29—H29A109.5
C12—C13—H13104.2C28—C29—H29B109.5
C15—C13—H13104.2H29A—C29—H29B109.5
C1—C13—H13104.2C28—C29—H29C109.5
C12—C14—H14A109.5H29A—C29—H29C109.5
C12—C14—H14B109.5H29B—C29—H29C109.5
H14A—C14—H14B109.5C28—C30—H30A109.5
C12—C14—H14C109.5C28—C30—H30B109.5
H14A—C14—H14C109.5H30A—C30—H30B109.5
H14B—C14—H14C109.5C28—C30—H30C109.5
C16—C15—C13112.40 (16)H30A—C30—H30C109.5
C16—C15—H15A109.1H30B—C30—H30C109.5
C13—C15—H15A109.1
C9—C1—C2—C369.8 (2)C1—C13—C15—C1699.7 (2)
C6—C1—C2—C354.1 (2)C13—C15—C16—C17176.18 (17)
C13—C1—C2—C3168.58 (17)C15—C16—C17—C18101.6 (2)
C1—C2—C3—C454.2 (2)C15—C16—C17—C22130.50 (18)
C2—C3—C4—O1133.3 (2)C22—C17—C18—C1912.3 (3)
C2—C3—C4—C548.9 (3)C16—C17—C18—C19140.2 (2)
O1—C4—C5—C819.3 (3)C22—C17—C18—C23171.38 (17)
C3—C4—C5—C8162.88 (19)C16—C17—C18—C2343.5 (2)
O1—C4—C5—C796.9 (2)C23—C18—C19—C20171.8 (2)
C3—C4—C5—C781.0 (2)C17—C18—C19—C204.3 (3)
O1—C4—C5—C6139.1 (2)C18—C19—C20—C2115.5 (3)
C3—C4—C5—C643.1 (2)C19—C20—C21—C2250.8 (2)
C2—C1—C6—C10175.45 (16)C19—C20—C21—C28175.54 (17)
C9—C1—C6—C1064.2 (2)C20—C21—C22—C25176.90 (16)
C13—C1—C6—C1059.6 (2)C28—C21—C22—C2545.9 (2)
C2—C1—C6—C551.8 (2)C20—C21—C22—C2454.7 (2)
C9—C1—C6—C568.5 (2)C28—C21—C22—C2476.3 (2)
C13—C1—C6—C5167.74 (17)C20—C21—C22—C1766.60 (19)
C4—C5—C6—C10177.08 (17)C28—C21—C22—C17162.38 (16)
C8—C5—C6—C1063.8 (2)C18—C17—C22—C25163.45 (16)
C7—C5—C6—C1057.2 (2)C16—C17—C22—C2568.9 (2)
C4—C5—C6—C145.7 (2)C18—C17—C22—C2476.0 (2)
C8—C5—C6—C1164.88 (18)C16—C17—C22—C2451.7 (2)
C7—C5—C6—C174.2 (2)C18—C17—C22—C2146.3 (2)
C1—C6—C10—C1162.1 (2)C16—C17—C22—C21173.97 (15)
C5—C6—C10—C11162.95 (18)C24—C22—C25—C2667.7 (2)
C6—C10—C11—C1257.2 (2)C21—C22—C25—C2655.6 (2)
C10—C11—C12—O2163.03 (17)C17—C22—C25—C26171.57 (16)
C10—C11—C12—C1477.5 (2)C22—C25—C26—C2759.3 (2)
C10—C11—C12—C1350.4 (2)C25—C26—C27—O3129.9 (2)
O2—C12—C13—C1558.4 (2)C25—C26—C27—C2851.7 (2)
C14—C12—C13—C1560.4 (2)O3—C27—C28—C3021.1 (3)
C11—C12—C13—C15174.34 (16)C26—C27—C28—C30160.48 (18)
O2—C12—C13—C1167.31 (16)O3—C27—C28—C2994.0 (2)
C14—C12—C13—C173.9 (2)C26—C27—C28—C2984.5 (2)
C11—C12—C13—C151.4 (2)O3—C27—C28—C21140.96 (19)
C2—C1—C13—C12171.36 (16)C26—C27—C28—C2140.6 (2)
C9—C1—C13—C1269.2 (2)C20—C21—C28—C27167.41 (17)
C6—C1—C13—C1255.8 (2)C22—C21—C28—C2738.2 (2)
C2—C1—C13—C1555.8 (2)C20—C21—C28—C3072.3 (2)
C9—C1—C13—C1563.6 (2)C22—C21—C28—C30158.42 (17)
C6—C1—C13—C15171.39 (16)C20—C21—C28—C2947.9 (2)
C12—C13—C15—C16125.90 (18)C22—C21—C28—C2981.4 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···O3i0.84 (1)2.15 (1)2.974 (2)167 (3)
Symmetry code: (i) x+2, y+1/2, z+3/2.

Experimental details

Crystal data
Chemical formulaC30H48O3
Mr456.68
Crystal system, space groupOrthorhombic, P212121
Temperature (K)100
a, b, c (Å)11.8841 (11), 14.8301 (13), 15.2755 (13)
V3)2692.2 (4)
Z4
Radiation typeMo Kα
µ (mm1)0.07
Crystal size (mm)0.20 × 0.10 × 0.05
Data collection
DiffractometerBruker SMART APEXII
diffractometer
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
26171, 3469, 3033
Rint0.067
(sin θ/λ)max1)0.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.039, 0.098, 1.01
No. of reflections3469
No. of parameters310
No. of restraints1
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.25, 0.20

Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···O3i0.84 (1)2.15 (1)2.974 (2)167 (3)
Symmetry code: (i) x+2, y+1/2, z+3/2.
 

Acknowledgements

This work was supported by the Directorate of Higher Education, Indonesia, the University of Padjadjaran (I-MHERE Project) and the University of Malaya (UMRG RG011/09BIO).

References

First citationBarbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.  CrossRef CAS Google Scholar
First citationBruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.  Google Scholar
First citationMayanti, T., Supratman, U., Mukhtar, M. R., Awang, K. & Ng, S. W. (2009). Acta Cryst. E65, o750.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationTjokronegero, R., Mayanti, T., Supratman, U., Mukhtar, M. R. & Ng, S. W. (2009). Acta Cryst. E65, o1448.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationWestrip, S. P. (2010). J. Appl. Cryst. 43. Submitted.  Google Scholar

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